ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags16g09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|L27349.1|BLYCRH2A Hordeum vulgare calreticulin (CRH2) mRNA, p... 595 e-167
2gb|L27348.1|BLYCRH1A Hordeum vulgare calreticulin (CRH1) mRNA, p... 595 e-167
3gb|AY836753.1| Triticum aestivum calreticulin-like protein mRNA,... 141 2e-30
4ref|XM_477251.1| Oryza sativa (japonica cultivar-group), mRNA 113 4e-22
5ref|XM_507358.1| PREDICTED Oryza sativa (japonica cultivar-group... 113 4e-22
6ref|XM_506239.2| PREDICTED Oryza sativa (japonica cultivar-group... 113 4e-22
7dbj|AK104826.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 4e-22
8dbj|AK099348.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 4e-22
9dbj|AK065341.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 4e-22
10dbj|AB021259.1| Oryza sativa mRNA for calcium-binding protein, c... 113 4e-22
11ref|XM_477252.1| Oryza sativa (japonica cultivar-group), mRNA 98 2e-17
12dbj|AK104328.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 2e-17
13emb|X78057.1|ZMCRHR Z.mays CRH mRNA 66 8e-08
14gb|AF190454.1|AF190454 Zea mays calreticulin (CRT) mRNA, complet... 66 8e-08
15dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 54 3e-04
16dbj|AP006266.3| Oryza sativa (japonica cultivar-group) genomic D... 54 3e-04
17dbj|AP003738.3| Oryza sativa (japonica cultivar-group) genomic D... 54 3e-04
18emb|Z46772.1|ZMCRT1GEN Zea mays CRT1 gene for calcium-binding pr... 44 0.29
19emb|X89813.1|ZMCALPREC Z.mays mRNA for calreticulin precursor 44 0.29
20gb|AY103855.1| Zea mays PCO074428 mRNA sequence 44 0.29
21gb|AC013558.10| Homo sapiens chromosome 18, clone RP11-41O4, com... 42 1.2
22emb|AL645848.15| Mouse DNA sequence from clone RP23-133B13 on ch... 42 1.2
23gb|BC065113.1| Mus musculus cut-like 2 (Drosophila), mRNA (cDNA ... 40 4.6
24gb|DQ483792.1| Gymnogyps californianus clone 215F microsatellite... 40 4.6
25gb|AC160109.2| Mus musculus BAC clone RP24-169I22 from chromosom... 40 4.6
26ref|NM_007804.2| Mus musculus cut-like 2 (Drosophila) (Cutl2), mRNA 40 4.6
27emb|AJ844233.1| Tarphius parallelus mitochondrial COI gene (part... 40 4.6
28gb|AC010063.7| Drosophila melanogaster 3L BAC RP98-16A3 (Roswell... 40 4.6
29dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
30gb|AC007403.4| Homo sapiens BAC clone RP11-547F18 from 2, comple... 40 4.6
31gb|AC079997.6| Homo sapiens BAC clone RP11-748B21 from 2, comple... 40 4.6
32gb|AC156448.2| Volvox carteri clone JGIAOBO-33O24, complete sequ... 40 4.6
33dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.6
34emb|BX537133.3| Zebrafish DNA sequence from clone DKEY-90M5 in l... 40 4.6
35dbj|AK063130.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.6
36gb|AE003473.3| Drosophila melanogaster chromosome 3L, section 7 ... 40 4.6
37gb|U45665.1|MMU45665 Mus musculus Cux-2 (Cutl2) mRNA, complete cds 40 4.6
38emb|AL844161.18| Mouse DNA sequence from clone RP23-343K11 on ch... 40 4.6
39gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome 40 4.6 
>gb|L27349.1|BLYCRH2A Hordeum vulgare calreticulin (CRH2) mRNA, partial cds
          Length = 1450

 Score =  595 bits (300), Expect = e-167
 Identities = 331/346 (95%)
 Strand = Plus / Minus

                                                                        
Query: 1    ttaacgactataanttcccttccagtaaaaatcgatntacaaaagcgctacaaagatncc 60
            ||||||||||||| |||||||||||||||||||||  |||||||||||||||||||| ||
Sbjct: 1445 ttaacgactataagttcccttccagtaaaaatcgaactacaaaagcgctacaaagatccc 1386

                                                                        
Query: 61   acggtgatgttgttcttctacacacagtaacttgtcaagtttctgatcacaaaaagggga 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1385 acggtgatgttgttcttctacacacagtaacttgtcaagtttctgatcacaaaaagggga 1326

                                                                        
Query: 121  acatcataatgagagacaactaataaatcctggcagcagcgcaaaggcaaaggcagcctc 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1325 acatcataatgagagacaactaataaatcctggcagcagcgcaaaggcaaaggcagcctc 1266

                                                                        
Query: 181  ctctcttccttgtcatctagagctcatcgtgcttctcatcatcagaatccnnnnnnnnct 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||        ||
Sbjct: 1265 ctctcttccttgtcatctagagctcatcgtgcttctcatcatcagaatccttgtcatcct 1206

                                                                        
Query: 241  cagcatcagacccagccttgtcgtccttgtcctnatngtcggcatcctcatcanccaagt 300
            ||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||
Sbjct: 1205 cagcatcagacccagccttgtcgtccttgtcctcatcgtcggcatcctcatcatccaagt 1146

                                                          
Query: 301  catcatcgtcctcaccggccttggaagcatcctcctcttccttctt 346
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1145 catcatcgtcctcaccggccttggaagcatcctcctcttccttctt 1100
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>gb|L27348.1|BLYCRH1A Hordeum vulgare calreticulin (CRH1) mRNA, partial cds
          Length = 1472

 Score =  595 bits (300), Expect = e-167
 Identities = 331/346 (95%)
 Strand = Plus / Minus

                                                                        
Query: 1    ttaacgactataanttcccttccagtaaaaatcgatntacaaaagcgctacaaagatncc 60
            ||||||||||||| |||||||||||||||||||||  |||||||||||||||||||| ||
Sbjct: 1437 ttaacgactataagttcccttccagtaaaaatcgaactacaaaagcgctacaaagatccc 1378

                                                                        
Query: 61   acggtgatgttgttcttctacacacagtaacttgtcaagtttctgatcacaaaaagggga 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1377 acggtgatgttgttcttctacacacagtaacttgtcaagtttctgatcacaaaaagggga 1318

                                                                        
Query: 121  acatcataatgagagacaactaataaatcctggcagcagcgcaaaggcaaaggcagcctc 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1317 acatcataatgagagacaactaataaatcctggcagcagcgcaaaggcaaaggcagcctc 1258

                                                                        
Query: 181  ctctcttccttgtcatctagagctcatcgtgcttctcatcatcagaatccnnnnnnnnct 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||        ||
Sbjct: 1257 ctctcttccttgtcatctagagctcatcgtgcttctcatcatcagaatccttgtcatcct 1198

                                                                        
Query: 241  cagcatcagacccagccttgtcgtccttgtcctnatngtcggcatcctcatcanccaagt 300
            ||||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||
Sbjct: 1197 cagcatcagacccagccttgtcgtccttgtcctcatcgtcggcatcctcatcatccaagt 1138

                                                          
Query: 301  catcatcgtcctcaccggccttggaagcatcctcctcttccttctt 346
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1137 catcatcgtcctcaccggccttggaagcatcctcctcttccttctt 1092
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>gb|AY836753.1| Triticum aestivum calreticulin-like protein mRNA, complete cds
          Length = 1248

 Score =  141 bits (71), Expect = 2e-30
 Identities = 95/104 (91%)
 Strand = Plus / Minus

                                                                        
Query: 243  gcatcagacccagccttgtcgtccttgtcctnatngtcggcatcctcatcanccaagtca 302
            |||||||||||||||||||| ||||||||||  |  ||||| ||||||||| ||||||||
Sbjct: 1214 gcatcagacccagccttgtcatccttgtcctcgtcatcggcttcctcatcatccaagtca 1155

                                                        
Query: 303  tcatcgtcctcaccggccttggaagcatcctcctcttccttctt 346
            |||||||||||||  |||||||||||||||||||||||||||||
Sbjct: 1154 tcatcgtcctcactagccttggaagcatcctcctcttccttctt 1111



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 197  ctagagctcatcgtgcttctcatcatcaga 226
            ||||||||||||||||||||| ||||||||
Sbjct: 1248 ctagagctcatcgtgcttctcgtcatcaga 1219
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>ref|XM_477251.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1539

 Score =  113 bits (57), Expect = 4e-22
 Identities = 126/152 (82%), Gaps = 3/152 (1%)
 Strand = Plus / Minus

                                                                        
Query: 198  tagagctcatcgtgcttctcatcatcagaatccnnnnnnnnctcagcatcagacccagcc 257
            ||||||||||| |||||||||||||||||||||        ||| ||||||||  |||||
Sbjct: 1323 tagagctcatcatgcttctcatcatcagaatccttgccatcctctgcatcagagtcagcc 1264

                                                                        
Query: 258  ttgtcgtc---cttgtcctnatngtcggcatcctcatcanccaagtcatcatcgtcctca 314
            || || ||   |||||||| ||  || |||||||| ||| |||| |||||||||||||||
Sbjct: 1263 ttctcatcggccttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctca 1204

                                            
Query: 315  ccggccttggaagcatcctcctcttccttctt 346
            |||||||||| ||| |||||||||||||||||
Sbjct: 1203 ccggccttggcagcttcctcctcttccttctt 1172



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                   
Query: 91   cttgtcaagtttctgatcacaaaaaggggaacatcataa 129
            |||||||||||||||||||| |||| |||||| ||||||
Sbjct: 1429 cttgtcaagtttctgatcacgaaaaagggaacttcataa 1391
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>ref|XM_507358.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1058_C08.28-2
            mRNA
          Length = 1557

 Score =  113 bits (57), Expect = 4e-22
 Identities = 126/152 (82%), Gaps = 3/152 (1%)
 Strand = Plus / Minus

                                                                        
Query: 198  tagagctcatcgtgcttctcatcatcagaatccnnnnnnnnctcagcatcagacccagcc 257
            ||||||||||| |||||||||||||||||||||        ||| ||||||||  |||||
Sbjct: 1325 tagagctcatcatgcttctcatcatcagaatccttgccatcctctgcatcagagtcagcc 1266

                                                                        
Query: 258  ttgtcgtc---cttgtcctnatngtcggcatcctcatcanccaagtcatcatcgtcctca 314
            || || ||   |||||||| ||  || |||||||| ||| |||| |||||||||||||||
Sbjct: 1265 ttctcatcggccttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctca 1206

                                            
Query: 315  ccggccttggaagcatcctcctcttccttctt 346
            |||||||||| ||| |||||||||||||||||
Sbjct: 1205 ccggccttggcagcttcctcctcttccttctt 1174



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                   
Query: 91   cttgtcaagtttctgatcacaaaaaggggaacatcataa 129
            |||||||||||||||||||| |||| |||||| ||||||
Sbjct: 1431 cttgtcaagtttctgatcacgaaaaagggaacttcataa 1393
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>ref|XM_506239.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1058_C08.28-2
            mRNA
          Length = 1585

 Score =  113 bits (57), Expect = 4e-22
 Identities = 126/152 (82%), Gaps = 3/152 (1%)
 Strand = Plus / Minus

                                                                        
Query: 198  tagagctcatcgtgcttctcatcatcagaatccnnnnnnnnctcagcatcagacccagcc 257
            ||||||||||| |||||||||||||||||||||        ||| ||||||||  |||||
Sbjct: 1351 tagagctcatcatgcttctcatcatcagaatccttgccatcctctgcatcagagtcagcc 1292

                                                                        
Query: 258  ttgtcgtc---cttgtcctnatngtcggcatcctcatcanccaagtcatcatcgtcctca 314
            || || ||   |||||||| ||  || |||||||| ||| |||| |||||||||||||||
Sbjct: 1291 ttctcatcggccttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctca 1232

                                            
Query: 315  ccggccttggaagcatcctcctcttccttctt 346
            |||||||||| ||| |||||||||||||||||
Sbjct: 1231 ccggccttggcagcttcctcctcttccttctt 1200



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                   
Query: 91   cttgtcaagtttctgatcacaaaaaggggaacatcataa 129
            |||||||||||||||||||| |||| |||||| ||||||
Sbjct: 1457 cttgtcaagtttctgatcacgaaaaagggaacttcataa 1419
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>dbj|AK104826.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-F11, full
            insert sequence
          Length = 1539

 Score =  113 bits (57), Expect = 4e-22
 Identities = 126/152 (82%), Gaps = 3/152 (1%)
 Strand = Plus / Minus

                                                                        
Query: 198  tagagctcatcgtgcttctcatcatcagaatccnnnnnnnnctcagcatcagacccagcc 257
            ||||||||||| |||||||||||||||||||||        ||| ||||||||  |||||
Sbjct: 1323 tagagctcatcatgcttctcatcatcagaatccttgccatcctctgcatcagagtcagcc 1264

                                                                        
Query: 258  ttgtcgtc---cttgtcctnatngtcggcatcctcatcanccaagtcatcatcgtcctca 314
            || || ||   |||||||| ||  || |||||||| ||| |||| |||||||||||||||
Sbjct: 1263 ttctcatcggccttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctca 1204

                                            
Query: 315  ccggccttggaagcatcctcctcttccttctt 346
            |||||||||| ||| |||||||||||||||||
Sbjct: 1203 ccggccttggcagcttcctcctcttccttctt 1172



 Score = 48.1 bits (24), Expect = 0.019
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 91   cttgtcaagtttctgatcacaaaaaggggaac 122
            |||||||||||||||||||| |||| ||||||
Sbjct: 1429 cttgtcaagtttctgatcacgaaaaagggaac 1398
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>dbj|AK099348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025I16, full
            insert sequence
          Length = 1556

 Score =  113 bits (57), Expect = 4e-22
 Identities = 126/152 (82%), Gaps = 3/152 (1%)
 Strand = Plus / Minus

                                                                        
Query: 198  tagagctcatcgtgcttctcatcatcagaatccnnnnnnnnctcagcatcagacccagcc 257
            ||||||||||| |||||||||||||||||||||        ||| ||||||||  |||||
Sbjct: 1324 tagagctcatcatgcttctcatcatcagaatccttgccatcctctgcatcagagtcagcc 1265

                                                                        
Query: 258  ttgtcgtc---cttgtcctnatngtcggcatcctcatcanccaagtcatcatcgtcctca 314
            || || ||   |||||||| ||  || |||||||| ||| |||| |||||||||||||||
Sbjct: 1264 ttctcatcggccttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctca 1205

                                            
Query: 315  ccggccttggaagcatcctcctcttccttctt 346
            |||||||||| ||| |||||||||||||||||
Sbjct: 1204 ccggccttggcagcttcctcctcttccttctt 1173



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                   
Query: 91   cttgtcaagtttctgatcacaaaaaggggaacatcataa 129
            |||||||||||||||||||| |||| |||||| ||||||
Sbjct: 1430 cttgtcaagtttctgatcacgaaaaagggaacttcataa 1392
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>dbj|AK065341.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000E04, full
            insert sequence
          Length = 1586

 Score =  113 bits (57), Expect = 4e-22
 Identities = 126/152 (82%), Gaps = 3/152 (1%)
 Strand = Plus / Minus

                                                                        
Query: 198  tagagctcatcgtgcttctcatcatcagaatccnnnnnnnnctcagcatcagacccagcc 257
            ||||||||||| |||||||||||||||||||||        ||| ||||||||  |||||
Sbjct: 1351 tagagctcatcatgcttctcatcatcagaatccttgccatcctctgcatcagagtcagcc 1292

                                                                        
Query: 258  ttgtcgtc---cttgtcctnatngtcggcatcctcatcanccaagtcatcatcgtcctca 314
            || || ||   |||||||| ||  || |||||||| ||| |||| |||||||||||||||
Sbjct: 1291 ttctcatcggccttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctca 1232

                                            
Query: 315  ccggccttggaagcatcctcctcttccttctt 346
            |||||||||| ||| |||||||||||||||||
Sbjct: 1231 ccggccttggcagcttcctcctcttccttctt 1200



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                   
Query: 91   cttgtcaagtttctgatcacaaaaaggggaacatcataa 129
            |||||||||||||||||||| |||| |||||| ||||||
Sbjct: 1457 cttgtcaagtttctgatcacgaaaaagggaacttcataa 1419
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>dbj|AB021259.1| Oryza sativa mRNA for calcium-binding protein, complete cds
          Length = 1558

 Score =  113 bits (57), Expect = 4e-22
 Identities = 126/152 (82%), Gaps = 3/152 (1%)
 Strand = Plus / Minus

                                                                        
Query: 198  tagagctcatcgtgcttctcatcatcagaatccnnnnnnnnctcagcatcagacccagcc 257
            ||||||||||| |||||||||||||||||||||        ||| ||||||||  |||||
Sbjct: 1304 tagagctcatcatgcttctcatcatcagaatccttgccatcctctgcatcagagtcagcc 1245

                                                                        
Query: 258  ttgtcgtc---cttgtcctnatngtcggcatcctcatcanccaagtcatcatcgtcctca 314
            || || ||   |||||||| ||  || |||||||| ||| |||| |||||||||||||||
Sbjct: 1244 ttctcatcggccttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctca 1185

                                            
Query: 315  ccggccttggaagcatcctcctcttccttctt 346
            |||||||||| ||| |||||||||||||||||
Sbjct: 1184 ccggccttggcagcttcctcctcttccttctt 1153



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                   
Query: 91   cttgtcaagtttctgatcacaaaaaggggaacatcataa 129
            |||||||||||||||||||| |||| |||||| ||||||
Sbjct: 1410 cttgtcaagtttctgatcacgaaaaagggaacttcataa 1372
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>ref|XM_477252.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1646

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 115/140 (82%), Gaps = 3/140 (2%)
 Strand = Plus / Minus

                                                                        
Query: 210  tgcttctcatcatcagaatccnnnnnnnnctcagcatcagacccagcctt---gtcgtcc 266
            |||||||||||||||||||||        ||| ||||||||  |||||||    ||| ||
Sbjct: 1304 tgcttctcatcatcagaatccttgccatcctctgcatcagagtcagccttctcatcggcc 1245

                                                                        
Query: 267  ttgtcctnatngtcggcatcctcatcanccaagtcatcatcgtcctcaccggccttggaa 326
            ||||||| ||  || |||||||| ||| |||| ||||||||||||||||||||||||| |
Sbjct: 1244 ttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctcaccggccttggca 1185

                                
Query: 327  gcatcctcctcttccttctt 346
            || |||||||||||||||||
Sbjct: 1184 gcttcctcctcttccttctt 1165



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                   
Query: 91   cttgtcaagtttctgatcacaaaaaggggaacatcataa 129
            |||||||||||||||||||| |||| |||||| ||||||
Sbjct: 1520 cttgtcaagtttctgatcacgaaaaagggaacttcataa 1482
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>dbj|AK104328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-H03, full
            insert sequence
          Length = 1675

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 115/140 (82%), Gaps = 3/140 (2%)
 Strand = Plus / Minus

                                                                        
Query: 210  tgcttctcatcatcagaatccnnnnnnnnctcagcatcagacccagcctt---gtcgtcc 266
            |||||||||||||||||||||        ||| ||||||||  |||||||    ||| ||
Sbjct: 1333 tgcttctcatcatcagaatccttgccatcctctgcatcagagtcagccttctcatcggcc 1274

                                                                        
Query: 267  ttgtcctnatngtcggcatcctcatcanccaagtcatcatcgtcctcaccggccttggaa 326
            ||||||| ||  || |||||||| ||| |||| ||||||||||||||||||||||||| |
Sbjct: 1273 ttgtcctcatcctcagcatcctcgtcatccaaatcatcatcgtcctcaccggccttggca 1214

                                
Query: 327  gcatcctcctcttccttctt 346
            || |||||||||||||||||
Sbjct: 1213 gcttcctcctcttccttctt 1194



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                   
Query: 91   cttgtcaagtttctgatcacaaaaaggggaacatcataa 129
            |||||||||||||||||||| |||| |||||| ||||||
Sbjct: 1549 cttgtcaagtttctgatcacgaaaaagggaacttcataa 1511
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>emb|X78057.1|ZMCRHR Z.mays CRH mRNA
          Length = 1183

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                
Query: 194 catctagagctcatcgtgcttctcatcatcagaatcc 230
           |||||||||||| ||||||||||||||||||||||||
Sbjct: 969 catctagagctcgtcgtgcttctcatcatcagaatcc 933
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>gb|AF190454.1|AF190454 Zea mays calreticulin (CRT) mRNA, complete cds
          Length = 1545

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                 
Query: 194  catctagagctcatcgtgcttctcatcatcagaatcc 230
            |||||||||||| ||||||||||||||||||||||||
Sbjct: 1343 catctagagctcgtcgtgcttctcatcatcagaatcc 1307
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                      
Query: 91      cttgtcaagtttctgatcacaaaaaggggaacatcataa 129
               |||||||||||||||||||| |||| |||||| ||||||
Sbjct: 8173083 cttgtcaagtttctgatcacgaaaaagggaacttcataa 8173045



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                      
Query: 295     ccaagtcatcatcgtcctcaccggccttggaagcatcct 333
               |||| ||||||||||||||||||||||||| ||| ||||
Sbjct: 8172694 ccaaatcatcatcgtcctcaccggccttggcagcttcct 8172656



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 210     tgcttctcatcatcagaatcc 230
               |||||||||||||||||||||
Sbjct: 8172867 tgcttctcatcatcagaatcc 8172847
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>dbj|AP006266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0003K21
          Length = 158810

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                    
Query: 91    cttgtcaagtttctgatcacaaaaaggggaacatcataa 129
             |||||||||||||||||||| |||| |||||| ||||||
Sbjct: 56106 cttgtcaagtttctgatcacgaaaaagggaacttcataa 56068



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                    
Query: 295   ccaagtcatcatcgtcctcaccggccttggaagcatcct 333
             |||| ||||||||||||||||||||||||| ||| ||||
Sbjct: 55717 ccaaatcatcatcgtcctcaccggccttggcagcttcct 55679



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 210   tgcttctcatcatcagaatcc 230
             |||||||||||||||||||||
Sbjct: 55890 tgcttctcatcatcagaatcc 55870
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>dbj|AP003738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1058_C08
          Length = 117923

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                     
Query: 91     cttgtcaagtttctgatcacaaaaaggggaacatcataa 129
              |||||||||||||||||||| |||| |||||| ||||||
Sbjct: 106855 cttgtcaagtttctgatcacgaaaaagggaacttcataa 106817



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                     
Query: 295    ccaagtcatcatcgtcctcaccggccttggaagcatcct 333
              |||| ||||||||||||||||||||||||| ||| ||||
Sbjct: 106466 ccaaatcatcatcgtcctcaccggccttggcagcttcct 106428



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 210    tgcttctcatcatcagaatcc 230
              |||||||||||||||||||||
Sbjct: 106639 tgcttctcatcatcagaatcc 106619
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>emb|Z46772.1|ZMCRT1GEN Zea mays CRT1 gene for calcium-binding protein
          Length = 1342

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 36/40 (90%), Gaps = 3/40 (7%)
 Strand = Plus / Minus

                                                    
Query: 194  catctagagctcatcgtgct---tctcatcatcagaatcc 230
            |||||||||||| |||||||   |||||||||||||||||
Sbjct: 1327 catctagagctcgtcgtgctgcttctcatcatcagaatcc 1288
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>emb|X89813.1|ZMCALPREC Z.mays mRNA for calreticulin precursor
          Length = 1614

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 36/40 (90%), Gaps = 3/40 (7%)
 Strand = Plus / Minus

                                                    
Query: 194  catctagagctcatcgtgct---tctcatcatcagaatcc 230
            |||||||||||| |||||||   |||||||||||||||||
Sbjct: 1344 catctagagctcgtcgtgctgcttctcatcatcagaatcc 1305
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>gb|AY103855.1| Zea mays PCO074428 mRNA sequence
          Length = 1787

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 36/40 (90%), Gaps = 3/40 (7%)
 Strand = Plus / Minus

                                                    
Query: 194  catctagagctcatcgtgct---tctcatcatcagaatcc 230
            |||||||||||| |||||||   |||||||||||||||||
Sbjct: 1401 catctagagctcgtcgtgctgcttctcatcatcagaatcc 1362
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>gb|AC013558.10| Homo sapiens chromosome 18, clone RP11-41O4, complete sequence
          Length = 133557

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 173   gcagcctcctctcttccttgt 193
             |||||||||||||||||||||
Sbjct: 50748 gcagcctcctctcttccttgt 50768
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>emb|AL645848.15| Mouse DNA sequence from clone RP23-133B13 on chromosome X, complete
             sequence
          Length = 175689

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 182   tctcttccttgtcatctagag 202
             |||||||||||||||||||||
Sbjct: 86671 tctcttccttgtcatctagag 86691
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>gb|BC065113.1| Mus musculus cut-like 2 (Drosophila), mRNA (cDNA clone MGC:85995
           IMAGE:30532644), complete cds
          Length = 5133

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 310 cctcaccggccttggaagcatcctcctc 337
           ||||| |||||||||||||| |||||||
Sbjct: 979 cctcatcggccttggaagcagcctcctc 952
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>gb|DQ483792.1| Gymnogyps californianus clone 215F microsatellite sequence
          Length = 604

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 328 catcctcctcttccttctta 347
           ||||||||||||||||||||
Sbjct: 504 catcctcctcttccttctta 523
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>gb|AC160109.2| Mus musculus BAC clone RP24-169I22 from chromosome 13, complete
             sequence
          Length = 151819

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 179   tcctctcttccttgtcatct 198
             ||||||||||||||||||||
Sbjct: 61640 tcctctcttccttgtcatct 61659
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>ref|NM_007804.2| Mus musculus cut-like 2 (Drosophila) (Cutl2), mRNA
          Length = 5133

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 310 cctcaccggccttggaagcatcctcctc 337
           ||||| |||||||||||||| |||||||
Sbjct: 979 cctcatcggccttggaagcagcctcctc 952
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>emb|AJ844233.1| Tarphius parallelus mitochondrial COI gene (partial), COII gene and
           tRNA-Leu gene from Portugal Madeira
          Length = 1196

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 17  cccttccagtaaaaatcgat 36
           ||||||||||||||||||||
Sbjct: 683 cccttccagtaaaaatcgat 664
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>gb|AC010063.7| Drosophila melanogaster 3L BAC RP98-16A3 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 194006

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 150   ctggcagcagcgcaaaggca 169
             ||||||||||||||||||||
Sbjct: 63820 ctggcagcagcgcaaaggca 63839
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 327      gcatcctcctcttccttctt 346
                ||||||||||||||||||||
Sbjct: 24789035 gcatcctcctcttccttctt 24789054
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>gb|AC007403.4| Homo sapiens BAC clone RP11-547F18 from 2, complete sequence
          Length = 176321

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 317   ggccttggaagcatcctcct 336
             ||||||||||||||||||||
Sbjct: 33865 ggccttggaagcatcctcct 33884
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>gb|AC079997.6| Homo sapiens BAC clone RP11-748B21 from 2, complete sequence
          Length = 118577

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 88    taacttgtcaagtttctgatcaca 111
             |||| |||||||||||||||||||
Sbjct: 16685 taacatgtcaagtttctgatcaca 16662
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>gb|AC156448.2| Volvox carteri clone JGIAOBO-33O24, complete sequence
          Length = 38975

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 153 gcagcagcgcaaaggcaaaggcag 176
           ||||||||||| ||||||||||||
Sbjct: 416 gcagcagcgcagaggcaaaggcag 439
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>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1345_D02
          Length = 159613

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   gcatcctcctcttccttctt 346
             ||||||||||||||||||||
Sbjct: 89836 gcatcctcctcttccttctt 89855
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>emb|BX537133.3| Zebrafish DNA sequence from clone DKEY-90M5 in linkage group 20, complete
              sequence
          Length = 249791

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 182    tctcttccttgtcatctagagctcatcgtgct 213
              ||||||||||||||||||  ||||||| ||||
Sbjct: 168756 tctcttccttgtcatctatggctcatcatgct 168787
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>dbj|AK063130.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-F06, full
           insert sequence
          Length = 632

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 327 gcatcctcctcttccttctt 346
           ||||||||||||||||||||
Sbjct: 131 gcatcctcctcttccttctt 112
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>gb|AE003473.3| Drosophila melanogaster chromosome 3L, section 7 of 83 of the complete
              sequence
          Length = 315108

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 150    ctggcagcagcgcaaaggca 169
              ||||||||||||||||||||
Sbjct: 168075 ctggcagcagcgcaaaggca 168056
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>gb|U45665.1|MMU45665 Mus musculus Cux-2 (Cutl2) mRNA, complete cds
          Length = 4842

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 310 cctcaccggccttggaagcatcctcctc 337
           ||||| |||||||||||||| |||||||
Sbjct: 800 cctcatcggccttggaagcagcctcctc 773
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>emb|AL844161.18| Mouse DNA sequence from clone RP23-343K11 on chromosome 4, complete
              sequence
          Length = 224031

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 18     ccttccagtaaaaatcgatntacaaaa 44
              ||||||||||||||||||| | |||||
Sbjct: 119691 ccttccagtaaaaatcgattttcaaaa 119717
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>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 60      cacggtgatgttgttcttct 79
               ||||||||||||||||||||
Sbjct: 1134839 cacggtgatgttgttcttct 1134858


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,189,454
Number of Sequences: 3902068
Number of extensions: 3189454
Number of successful extensions: 77544
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77400
Number of HSP's gapped (non-prelim): 141
length of query: 347
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 325
effective length of database: 17,147,199,772
effective search space: 5572839925900
effective search space used: 5572839925900
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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