>gb|BT019114.1| Zea mays clone Contig722.F mRNA sequence
          Length = 548

 Score =  137 bits (69), Expect = 3e-29
 Identities = 93/101 (92%)
 Strand = Plus / Plus

                                                                       
Query: 244 gaggtcagctgccttaggttgaatttcgaaagctctttgtatctctccaccactccaatc 303
           ||||||||||||||||||||||| ||||| ||||||||||| || ||||| |||||||||
Sbjct: 395 gaggtcagctgccttaggttgaacttcgagagctctttgtacctttccacaactccaatc 454

                                                    
Query: 304 atgcatatagtcttggcaatctggacaataatagtcttgtc 344
           |||||||| ||||| ||||||||||||| ||||||||||||
Sbjct: 455 atgcatatggtctttgcaatctggacaacaatagtcttgtc 495

>dbj|AK121732.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082H18, full
            insert sequence
          Length = 1445

 Score =  137 bits (69), Expect = 3e-29
 Identities = 105/117 (89%)
 Strand = Plus / Minus

                                                                        
Query: 228  ctacttctccggtggcgaggtcagctgccttaggttgaatttcgaaagctctttgtatct 287
            ||||||||||||||| |||||||||||||||| |||||| || |  ||||||||||| ||
Sbjct: 1202 ctacttctccggtggtgaggtcagctgccttaagttgaactttgcgagctctttgtacct 1143

                                                                     
Query: 288  ctccaccactccaatcatgcatatagtcttggcaatctggacaataatagtcttgtc 344
            ||| ||||| |||||||||||||||||||| || |||||||||||||||||| ||||
Sbjct: 1142 ctcgaccaccccaatcatgcatatagtcttagctatctggacaataatagtcctgtc 1086

>gb|AY105168.1| Zea mays PCO065439 mRNA sequence
          Length = 1152

 Score =  137 bits (69), Expect = 3e-29
 Identities = 93/101 (92%)
 Strand = Plus / Minus

                                                                       
Query: 244 gaggtcagctgccttaggttgaatttcgaaagctctttgtatctctccaccactccaatc 303
           ||||||||||||||||||||||| ||||| ||||||||||| || ||||| |||||||||
Sbjct: 850 gaggtcagctgccttaggttgaacttcgagagctctttgtacctttccacaactccaatc 791

                                                    
Query: 304 atgcatatagtcttggcaatctggacaataatagtcttgtc 344
           |||||||| ||||| ||||||||||||| ||||||||||||
Sbjct: 790 atgcatatggtctttgcaatctggacaacaatagtcttgtc 750

>gb|AC109644.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone
             P0459F09, complete sequence
          Length = 143533

 Score =  105 bits (53), Expect = 9e-20
 Identities = 80/89 (89%)
 Strand = Plus / Plus

                                                                         
Query: 228   ctacttctccggtggcgaggtcagctgccttaggttgaatttcgaaagctctttgtatct 287
             ||||||||||||||| |||||||||||||||| |||||| || |  ||||||||||| ||
Sbjct: 92672 ctacttctccggtggtgaggtcagctgccttaagttgaactttgcgagctctttgtacct 92731

                                          
Query: 288   ctccaccactccaatcatgcatatagtct 316
             ||| ||||| |||||||||||||||||||
Sbjct: 92732 ctcgaccaccccaatcatgcatatagtct 92760

>gb|AC144559.1| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone
             P0459F09, complete sequence
          Length = 143533

 Score =  105 bits (53), Expect = 9e-20
 Identities = 80/89 (89%)
 Strand = Plus / Plus

                                                                         
Query: 228   ctacttctccggtggcgaggtcagctgccttaggttgaatttcgaaagctctttgtatct 287
             ||||||||||||||| |||||||||||||||| |||||| || |  ||||||||||| ||
Sbjct: 92672 ctacttctccggtggtgaggtcagctgccttaagttgaactttgcgagctctttgtacct 92731

                                          
Query: 288   ctccaccactccaatcatgcatatagtct 316
             ||| ||||| |||||||||||||||||||
Sbjct: 92732 ctcgaccaccccaatcatgcatatagtct 92760

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  105 bits (53), Expect = 9e-20
 Identities = 80/89 (89%)
 Strand = Plus / Minus

                                                                            
Query: 228      ctacttctccggtggcgaggtcagctgccttaggttgaatttcgaaagctctttgtatct 287
                ||||||||||||||| |||||||||||||||| |||||| || |  ||||||||||| ||
Sbjct: 20343535 ctacttctccggtggtgaggtcagctgccttaagttgaactttgcgagctctttgtacct 20343476

                                             
Query: 288      ctccaccactccaatcatgcatatagtct 316
                ||| ||||| |||||||||||||||||||
Sbjct: 20343475 ctcgaccaccccaatcatgcatatagtct 20343447

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  105 bits (53), Expect = 9e-20
 Identities = 80/89 (89%)
 Strand = Plus / Minus

                                                                            
Query: 228      ctacttctccggtggcgaggtcagctgccttaggttgaatttcgaaagctctttgtatct 287
                ||||||||||||||| |||||||||||||||| |||||| || |  ||||||||||| ||
Sbjct: 20653769 ctacttctccggtggtgaggtcagctgccttaagttgaactttgcgagctctttgtacct 20653710

                                             
Query: 288      ctccaccactccaatcatgcatatagtct 316
                ||| ||||| |||||||||||||||||||
Sbjct: 20653709 ctcgaccaccccaatcatgcatatagtct 20653681



 Score = 44.1 bits (22), Expect = 0.30
 Identities = 67/82 (81%)
 Strand = Plus / Minus

                                                                            
Query: 231      cttctccggtggcgaggtcagctgccttaggttgaatttcgaaagctctttgtatctctc 290
                ||||| |||||| |||||||||||| |||| ||||| || |  ||| || |||| |||||
Sbjct: 19856739 cttctgcggtggtgaggtcagctgctttagattgaactttgcgagcactgtgtacctctc 19856680

                                      
Query: 291      caccactccaatcatgcatata 312
                 | |||||||| ||| ||||||
Sbjct: 19856679 gatcactccaaccatacatata 19856658

>dbj|AK121354.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023122F17, full
            insert sequence
          Length = 2578

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 87/106 (82%)
 Strand = Plus / Minus

                                                                        
Query: 231  cttctccggtggcgaggtcagctgccttaggttgaatttcgaaagctctttgtatctctc 290
            ||||| |||||| |||||||||||| |||| ||||| || |  ||| || |||| |||||
Sbjct: 2123 cttctgcggtggtgaggtcagctgctttagattgaactttgcgagcactgtgtacctctc 2064

                                                          
Query: 291  caccactccaatcatgcatatagtcttggcaatctggacaataata 336
             | |||||||| ||| |||||| ||||  ||||||| |||||||||
Sbjct: 2063 gatcactccaaccatacatataatcttctcaatctgcacaataata 2018

>dbj|AK067699.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116E21, full
            insert sequence
          Length = 2440

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 87/106 (82%)
 Strand = Plus / Minus

                                                                        
Query: 231  cttctccggtggcgaggtcagctgccttaggttgaatttcgaaagctctttgtatctctc 290
            ||||| |||||| |||||||||||| |||| ||||| || |  ||| || |||| |||||
Sbjct: 2122 cttctgcggtggtgaggtcagctgctttagattgaactttgcgagcactgtgtacctctc 2063

                                                          
Query: 291  caccactccaatcatgcatatagtcttggcaatctggacaataata 336
             | |||||||| ||| |||||| ||||  ||||||| |||||||||
Sbjct: 2062 gatcactccaaccatacatataatcttctcaatctgcacaataata 2017

>gb|CP000108.1| Chlorobium chlorochromatii CaD3, complete genome
          Length = 2572079

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 128    aaaatgactttcacggttcagct 150
              |||||||||||||||||||||||
Sbjct: 111236 aaaatgactttcacggttcagct 111214

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 148     gctcatcactagtagtagctagt 170
               |||||||||||||||||||||||
Sbjct: 5200942 gctcatcactagtagtagctagt 5200920

>dbj|AP003417.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0498B01
          Length = 146812

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 148    gctcatcactagtagtagctagt 170
              |||||||||||||||||||||||
Sbjct: 132973 gctcatcactagtagtagctagt 132951

>dbj|AK102964.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115I17, full
           insert sequence
          Length = 1751

 Score = 46.1 bits (23), Expect = 0.075
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 148 gctcatcactagtagtagctagt 170
           |||||||||||||||||||||||
Sbjct: 82  gctcatcactagtagtagctagt 60

>gb|AC128706.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0063F24, complete sequence
          Length = 152738

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 67/82 (81%)
 Strand = Plus / Minus

                                                                         
Query: 231   cttctccggtggcgaggtcagctgccttaggttgaatttcgaaagctctttgtatctctc 290
             ||||| |||||| |||||||||||| |||| ||||| || |  ||| || |||| |||||
Sbjct: 79200 cttctgcggtggtgaggtcagctgctttagattgaactttgcgagcactgtgtacctctc 79141

                                   
Query: 291   caccactccaatcatgcatata 312
              | |||||||| ||| ||||||
Sbjct: 79140 gatcactccaaccatacatata 79119

>gb|AC089992.2| Bos taurus clone RP42-210F11, complete sequence
          Length = 147922

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 144   ttcagctcatcactagtagta 164
             |||||||||||||||||||||
Sbjct: 85568 ttcagctcatcactagtagta 85548

>gb|DP000008.1| Bos taurus target 1 genomic scaffold
          Length = 2072671

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 144     ttcagctcatcactagtagta 164
               |||||||||||||||||||||
Sbjct: 1313741 ttcagctcatcactagtagta 1313721

>gb|AC146570.6| Medicago truncatula clone mth2-103j7, complete sequence
          Length = 122623

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 296   ctccaatcatgcatatagtct 316
             |||||||||||||||||||||
Sbjct: 85230 ctccaatcatgcatatagtct 85250

>gb|AF109075.2|AF109075 Clostridium difficile IlvD (ilvD) gene, partial cds; HydR (hydR), HydD
             (hydD), erm leader peptide, rRNA methyltransferase Erm1B
             (erm1B), rRNA methyltransferase Erm2B (erm2B), EffR
             (effR), EffD (effD), IspD (ispD), and FlxD (flxD) genes,
             complete cds; transposon Tn5398, complete sequence; and
             unknown genes
          Length = 14992

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 111   tacatctgaatcatttgaaaa 131
             |||||||||||||||||||||
Sbjct: 11060 tacatctgaatcatttgaaaa 11040

>gb|AC113001.9| Mus musculus chromosome 7, clone RP23-184M4, complete sequence
          Length = 206940

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   aataatacatctgaatcatt 125
             ||||||||||||||||||||
Sbjct: 50174 aataatacatctgaatcatt 50155

>gb|AC044787.6|AC044787 Homo sapiens chromosome 15 clone CTD-2270N23 map 15q21, complete
             sequence
          Length = 148147

 Score = 40.1 bits (20), Expect = 4.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 288   ctccaccactccaatcatgcatat 311
             ||||| ||||||||||||||||||
Sbjct: 83645 ctccaacactccaatcatgcatat 83668


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,734,029
Number of Sequences: 3902068
Number of extensions: 2734029
Number of successful extensions: 52276
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52148
Number of HSP's gapped (non-prelim): 128
length of query: 348
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 326
effective length of database: 17,147,199,772
effective search space: 5589987125672
effective search space used: 5589987125672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)