| Clone Name | rbags16f02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY103718.1| Zea mays PCO128797 mRNA sequence Length = 1097 Score = 244 bits (123), Expect = 3e-61 Identities = 259/302 (85%), Gaps = 3/302 (0%) Strand = Plus / Minus Query: 147 tctctctccttgtcctagtagcaagacattggcttcttcttctttttctgggccttggca 206 |||| ||||||||||||||||||| ||||| ||| |||||||| |||| ||||||||| Sbjct: 943 tctccctccttgtcctagtagcaaagcattg-ctt--tcttctttctctgagccttggca 887 Query: 207 attgtcttcctgtcaacgtaagcaagtagttcctcttgcctgataagagcctcgtgcaga 266 || || | ||| | ||| ||||| ||||||||||||||||||||||||||||||| | Sbjct: 886 atctctttgcggtcgatgtacgcaagcagttcctcttgcctgataagagcctcgtgcaaa 827 Query: 267 gccttctttgttacaatgagctcagcttccagtgcatccacacggcggacagcagcatta 326 ||||||||||||||||| || || ||||||| |||||| ||||| || ||||| || ||| Sbjct: 826 gccttctttgttacaattagttcggcttccaatgcatcgacacgacgcacagcggcgtta 767 Query: 327 agcaactcttctttctcgcaaggcatttcggaaggtttttcttcaagcgcgtgaaccttg 386 ||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||| Sbjct: 766 agcaactcttctttctcgcaaggcatttcggaaggcttttcttgaagcatctgaaccttc 707 Query: 387 gcttcaagctctgccagcctttgcaagactaacgagaacaggtcagattcagcaaaccca 446 ||||||||||| |||||||||||||||| | | ||||||||| | ||||||||| ||| Sbjct: 706 tcttcaagctctcccagcctttgcaagaccacggcgaacaggtcggcttcagcaaatcca 647 Query: 447 gg 448 || Sbjct: 646 gg 645 Score = 48.1 bits (24), Expect = 0.039 Identities = 66/80 (82%) Strand = Plus / Minus Query: 527 tttatgtggcaatctctttgtggcaacatctttaactgaccggagcagcgttacaatagc 586 ||||| |||||||||| ||||| ||| |||||| ||||| || | || | |||||||||| Sbjct: 566 tttatatggcaatctccttgtgacaagatctttgactgatcgaaccatcattacaatagc 507 Query: 587 aatcacaaaagccatcagag 606 || | | |||||||||||| Sbjct: 506 cataagacaagccatcagag 487
>ref|XM_464026.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1875 Score = 242 bits (122), Expect = 1e-60 Identities = 324/390 (83%), Gaps = 6/390 (1%) Strand = Plus / Minus Query: 182 cttcttctttttctgggccttggcaattgtcttcctgtcaacgtaagcaagtagttcctc 241 ||||||||||||||| |||||||||| ||| ||||| | ||| || ||||||||||| Sbjct: 1857 cttcttctttttctgagccttggcaacctccttactgtcgatgtaggctagtagttcctc 1798 Query: 242 ttgcctgataagagcctcgtgcagagccttctttgttacaatgagctcagcttccagtgc 301 |||||||||||||||||| || || ||||||||||||||||| || ||||||||||| || Sbjct: 1797 ttgcctgataagagcctcatgtagggccttctttgttacaataagttcagcttccagcgc 1738 Query: 302 atccacacggcggacagcagcattaagcaactcttctttctcgcaaggcatttcggaagg 361 ||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 1737 atccacacggcggacagcagcattaagcaactcttctttctcgcagggcatctctgaagg 1678 Query: 362 tttttcttcaagcgcgtgaaccttggcttcaagctctgccagcctttgcaagactaacga 421 || |||| |||| | | ||| ||||||| ||| ||||||||||||||||| |||| Sbjct: 1677 cttatcttgaagcatcaggaacttctcttcaagatctcccagcctttgcaagactgacga 1618 Query: 422 gaacaggtcagattcagcaaacccaggacctggcgacggggggcggaactcctccttggg 481 || || |||| |||| ||||||||||| ||| || || || ||||| ||||| || || Sbjct: 1617 aaatagttcagcttcaacaaacccaggagttggggaaggtggtcggaattcctcttttgg 1558 Query: 482 aatgcagtcttgatata---ttgaagaactttgttcatctgactcatttttatgtggcaa 538 || ||||| |||||| ||||| | | ||||| |||||| ||||||| |||||| Sbjct: 1557 catcgagtctggatataatgttgaatacttctgttc---tgactcgtttttatctggcaa 1501 Query: 539 tctctttgtggcaacatctttaactgaccg 568 |||||||| |||| ||||||||||||||| Sbjct: 1500 tctctttgcagcaagatctttaactgaccg 1471
>dbj|AK060180.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-B05, full insert sequence Length = 1467 Score = 242 bits (122), Expect = 1e-60 Identities = 324/390 (83%), Gaps = 6/390 (1%) Strand = Plus / Minus Query: 182 cttcttctttttctgggccttggcaattgtcttcctgtcaacgtaagcaagtagttcctc 241 ||||||||||||||| |||||||||| ||| ||||| | ||| || ||||||||||| Sbjct: 1252 cttcttctttttctgagccttggcaacctccttactgtcgatgtaggctagtagttcctc 1193 Query: 242 ttgcctgataagagcctcgtgcagagccttctttgttacaatgagctcagcttccagtgc 301 |||||||||||||||||| || || ||||||||||||||||| || ||||||||||| || Sbjct: 1192 ttgcctgataagagcctcatgtagggccttctttgttacaataagttcagcttccagcgc 1133 Query: 302 atccacacggcggacagcagcattaagcaactcttctttctcgcaaggcatttcggaagg 361 ||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||| Sbjct: 1132 atccacacggcggacagcagcattaagcaactcttctttctcgcagggcatctctgaagg 1073 Query: 362 tttttcttcaagcgcgtgaaccttggcttcaagctctgccagcctttgcaagactaacga 421 || |||| |||| | | ||| ||||||| ||| ||||||||||||||||| |||| Sbjct: 1072 cttatcttgaagcatcaggaacttctcttcaagatctcccagcctttgcaagactgacga 1013 Query: 422 gaacaggtcagattcagcaaacccaggacctggcgacggggggcggaactcctccttggg 481 || || |||| |||| ||||||||||| ||| || || || ||||| ||||| || || Sbjct: 1012 aaatagttcagcttcaacaaacccaggagttggggaaggtggtcggaattcctcttttgg 953 Query: 482 aatgcagtcttgatata---ttgaagaactttgttcatctgactcatttttatgtggcaa 538 || ||||| |||||| ||||| | | ||||| |||||| ||||||| |||||| Sbjct: 952 catcgagtctggatataatgttgaatacttctgttc---tgactcgtttttatctggcaa 896 Query: 539 tctctttgtggcaacatctttaactgaccg 568 |||||||| |||| ||||||||||||||| Sbjct: 895 tctctttgcagcaagatctttaactgaccg 866
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 174 bits (88), Expect = 3e-40 Identities = 251/304 (82%), Gaps = 6/304 (1%) Strand = Plus / Minus Query: 268 ccttctttgttacaatgagctcagcttccagtgcatccacacggcggacagcagcattaa 327 |||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||| Sbjct: 1747794 ccttctttgttacaataagttcagcttccagcgcatccacacggcggacagcagcattaa 1747735 Query: 328 gcaactcttctttctcgcaaggcatttcggaaggtttttcttcaagcgcgtgaaccttgg 387 ||||||||||||||||||| ||||| || ||||| || |||| |||| | | ||| Sbjct: 1747734 gcaactcttctttctcgcagggcatctctgaaggcttatcttgaagcatcaggaacttct 1747675 Query: 388 cttcaagctctgccagcctttgcaagactaacgagaacaggtcagattcagcaaacccag 447 ||||||| ||| ||||||||||||||||| |||| || || |||| |||| ||||||||| Sbjct: 1747674 cttcaagatctcccagcctttgcaagactgacgaaaatagttcagcttcaacaaacccag 1747615 Query: 448 gacctggcgacggggggcggaactcctccttgggaatgcagtcttgatata---ttgaag 504 || ||| || || || ||||| ||||| || || || ||||| |||||| ||||| Sbjct: 1747614 gagttggggaaggtggtcggaattcctcttttggcatcgagtctggatataatgttgaat 1747555 Query: 505 aactttgttcatctgactcatttttatgtggcaatctctttgtggcaacatctttaactg 564 | | ||||| |||||| ||||||| |||||||||||||| |||| ||||||||||| Sbjct: 1747554 acttctgttc---tgactcgtttttatctggcaatctctttgcagcaagatctttaactg 1747498 Query: 565 accg 568 |||| Sbjct: 1747497 accg 1747494 Score = 75.8 bits (38), Expect = 2e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 182 cttcttctttttctgggccttggcaattgtcttcctgtcaacgtaagcaagtagttcctc 241 ||||||||||||||| |||||||||| ||| ||||| | ||| || ||||||||||| Sbjct: 1747986 cttcttctttttctgagccttggcaacctccttactgtcgatgtaggctagtagttcctc 1747927 Query: 242 ttgcctgataagagcctc 259 |||||||||||||||||| Sbjct: 1747926 ttgcctgataagagcctc 1747909
>dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G11 Length = 143943 Score = 174 bits (88), Expect = 3e-40 Identities = 251/304 (82%), Gaps = 6/304 (1%) Strand = Plus / Minus Query: 268 ccttctttgttacaatgagctcagcttccagtgcatccacacggcggacagcagcattaa 327 |||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||| Sbjct: 65806 ccttctttgttacaataagttcagcttccagcgcatccacacggcggacagcagcattaa 65747 Query: 328 gcaactcttctttctcgcaaggcatttcggaaggtttttcttcaagcgcgtgaaccttgg 387 ||||||||||||||||||| ||||| || ||||| || |||| |||| | | ||| Sbjct: 65746 gcaactcttctttctcgcagggcatctctgaaggcttatcttgaagcatcaggaacttct 65687 Query: 388 cttcaagctctgccagcctttgcaagactaacgagaacaggtcagattcagcaaacccag 447 ||||||| ||| ||||||||||||||||| |||| || || |||| |||| ||||||||| Sbjct: 65686 cttcaagatctcccagcctttgcaagactgacgaaaatagttcagcttcaacaaacccag 65627 Query: 448 gacctggcgacggggggcggaactcctccttgggaatgcagtcttgatata---ttgaag 504 || ||| || || || ||||| ||||| || || || ||||| |||||| ||||| Sbjct: 65626 gagttggggaaggtggtcggaattcctcttttggcatcgagtctggatataatgttgaat 65567 Query: 505 aactttgttcatctgactcatttttatgtggcaatctctttgtggcaacatctttaactg 564 | | ||||| |||||| ||||||| |||||||||||||| |||| ||||||||||| Sbjct: 65566 acttctgttc---tgactcgtttttatctggcaatctctttgcagcaagatctttaactg 65510 Query: 565 accg 568 |||| Sbjct: 65509 accg 65506 Score = 75.8 bits (38), Expect = 2e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 182 cttcttctttttctgggccttggcaattgtcttcctgtcaacgtaagcaagtagttcctc 241 ||||||||||||||| |||||||||| ||| ||||| | ||| || ||||||||||| Sbjct: 65998 cttcttctttttctgagccttggcaacctccttactgtcgatgtaggctagtagttcctc 65939 Query: 242 ttgcctgataagagcctc 259 |||||||||||||||||| Sbjct: 65938 ttgcctgataagagcctc 65921
>gb|AF367433.1|AF367433 Lotus japonicus phosphatidylinositol transfer-like protein III (LjPLP-III) mRNA, complete cds Length = 2256 Score = 67.9 bits (34), Expect = 4e-08 Identities = 109/134 (81%) Strand = Plus / Minus Query: 219 tcaacgtaagcaagtagttcctcttgcctgataagagcctcgtgcagagccttctttgtt 278 |||| ||||||||| || || |||||||| || |||||||| | |||||||| || || Sbjct: 1908 tcaatgtaagcaagaagctcttcttgcctcattagagcctcatagagagcctttttagta 1849 Query: 279 acaatgagctcagcttccagtgcatccacacggcggacagcagcattaagcaactcttct 338 |||| | ||||||||||| |||||||| |||| ||||||||||| | ||| || ||| Sbjct: 1848 gcaattaactcagcttccaaagcatccacccggcatacagcagcattcaacaattcctct 1789 Query: 339 ttctcgcaaggcat 352 |||||| ||||||| Sbjct: 1788 ttctcgtaaggcat 1775
>ref|NM_101821.2| Arabidopsis thaliana phosphatidylinositol transporter/ transporter AT1G19650 mRNA, complete cds Length = 2213 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 282 atgagctcagcttccagtgcatccacacggcggacagcagcattaagcaactcttctttc 341 |||||||| ||||| |||||||||||||| ||||||||||| |||||||| |||||| Sbjct: 1884 atgagctctgcttctagtgcatccacacgatatacagcagcattcagcaactcctctttc 1825 Query: 342 tcgcaaggcatttcgga 358 ||| |||||| ||||| Sbjct: 1824 tcgtgaggcatctcgga 1808
>gb|AC024609.2| Arabidopsis thaliana chromosome I BAC F14P1 genomic sequence, complete sequence Length = 90341 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 282 atgagctcagcttccagtgcatccacacggcggacagcagcattaagcaactcttctttc 341 |||||||| ||||| |||||||||||||| ||||||||||| |||||||| |||||| Sbjct: 65737 atgagctctgcttctagtgcatccacacgatatacagcagcattcagcaactcctctttc 65678 Query: 342 tcgcaaggcatttcgga 358 ||| |||||| ||||| Sbjct: 65677 tcgtgaggcatctcgga 65661
>gb|AY056251.1| Arabidopsis thaliana putative sec14 cytosolic factor (At1g19650) mRNA, complete cds Length = 2258 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 282 atgagctcagcttccagtgcatccacacggcggacagcagcattaagcaactcttctttc 341 |||||||| ||||| |||||||||||||| ||||||||||| |||||||| |||||| Sbjct: 1886 atgagctctgcttctagtgcatccacacgatatacagcagcattcagcaactcctctttc 1827 Query: 342 tcgcaaggcatttcgga 358 ||| |||||| ||||| Sbjct: 1826 tcgtgaggcatctcgga 1810
>dbj|AK222017.1| Arabidopsis thaliana mRNA for sec14 cytosolic factor- like protein, complete cds, clone: RAFL22-69-F01 Length = 1097 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 282 atgagctcagcttccagtgcatccacacggcggacagcagcattaagcaactcttctttc 341 |||||||| ||||| |||||||||||||| ||||||||||| |||||||| |||||| Sbjct: 749 atgagctctgcttctagtgcatccacacgatatacagcagcattcagcaactcctctttc 690 Query: 342 tcgcaaggcatttcgga 358 ||| |||||| ||||| Sbjct: 689 tcgtgaggcatctcgga 673
>gb|AY008435.1| Arabidopsis thaliana S-adenosyl-L-methionine:jasmonic acid carboxyl methyltransferase (JMT) gene, complete cds Length = 8524 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 282 atgagctcagcttccagtgcatccacacggcggacagcagcattaagcaactcttctttc 341 |||||||| ||||| |||||||||||||| ||||||||||| |||||||| |||||| Sbjct: 303 atgagctctgcttctagtgcatccacacgatatacagcagcattcagcaactcctctttc 244 Query: 342 tcgcaaggcatttcgga 358 ||| |||||| ||||| Sbjct: 243 tcgtgaggcatctcgga 227
>emb|BX813924.1|CNS0AASU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB48ZB06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2255 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 282 atgagctcagcttccagtgcatccacacggcggacagcagcattaagcaactcttctttc 341 |||||||| ||||| |||||||||||||| ||||||||||| |||||||| |||||| Sbjct: 1918 atgagctctgcttctagtgcatccacacgatatacagcagcattcagcaactcctctttc 1859 Query: 342 tcgcaaggcatttcgga 358 ||| |||||| ||||| Sbjct: 1858 tcgtgaggcatctcgga 1842
>ref|NM_120077.2| Arabidopsis thaliana phosphatidylinositol transporter/ transporter AT4G39170 mRNA, complete cds Length = 2216 Score = 61.9 bits (31), Expect = 3e-06 Identities = 109/135 (80%) Strand = Plus / Minus Query: 218 gtcaacgtaagcaagtagttcctcttgcctgataagagcctcgtgcagagccttctttgt 277 ||||| |||||| |||| ||| ||||| || || ||||| || | ||||||||||| || Sbjct: 1999 gtcaatgtaagcgagtaattcttcttgtctcatcagagcttcataaagagccttcttagt 1940 Query: 278 tacaatgagctcagcttccagtgcatccacacggcggacagcagcattaagcaactcttc 337 | |||||||||||||| || || || ||||||| |||||| |||||||||| || || Sbjct: 1939 ggctatgagctcagcttcaagggcgtctacacggcagacagctgcattaagcagttcctc 1880 Query: 338 tttctcgcaaggcat 352 |||||| ||||||| Sbjct: 1879 tttctcataaggcat 1865
>gb|AY133598.1| Arabidopsis thaliana AT4g39170/T22F8_70 mRNA, complete cds Length = 1752 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 264 agagccttctttgttacaatgagctcagcttccagtgcatccacacggcggacagcagca 323 ||||||||||| || | |||||||||||||| || || || ||||||| |||||| ||| Sbjct: 1739 agagccttcttagtggctatgagctcagcttcaagggcgtctacacggcagacagctgca 1680 Query: 324 ttaagcaactcttctttctcgcaaggcat 352 ||||||| || |||||||| ||||||| Sbjct: 1679 ttaagcagttcctctttctcataaggcat 1651
>gb|AY037182.1| Arabidopsis thaliana AT4g39170/T22F8_70 mRNA, complete cds Length = 2214 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 264 agagccttctttgttacaatgagctcagcttccagtgcatccacacggcggacagcagca 323 ||||||||||| || | |||||||||||||| || || || ||||||| |||||| ||| Sbjct: 1952 agagccttcttagtggctatgagctcagcttcaagggcgtctacacggcagacagctgca 1893 Query: 324 ttaagcaactcttctttctcgcaaggcat 352 ||||||| || |||||||| ||||||| Sbjct: 1892 ttaagcagttcctctttctcataaggcat 1864
>emb|AL161594.2|ATCHRIV90 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 90 Length = 198987 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 282 atgagctcagcttccagtgcatccacacggcggacagcagcattaagcaactcttctttc 341 |||||||||||||| || || || ||||||| |||||| |||||||||| || |||||| Sbjct: 157438 atgagctcagcttcaagggcgtctacacggcagacagctgcattaagcagttcctctttc 157379 Query: 342 tcgcaaggcat 352 || ||||||| Sbjct: 157378 tcataaggcat 157368
>emb|AL050351.1|ATT22F8 Arabidopsis thaliana DNA chromosome 4, BAC clone T22F8 (ESSA project) Length = 89035 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 282 atgagctcagcttccagtgcatccacacggcggacagcagcattaagcaactcttctttc 341 |||||||||||||| || || || ||||||| |||||| |||||||||| || |||||| Sbjct: 25974 atgagctcagcttcaagggcgtctacacggcagacagctgcattaagcagttcctctttc 25915 Query: 342 tcgcaaggcat 352 || ||||||| Sbjct: 25914 tcataaggcat 25904
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 518 tgactcatttttatgtggcaatctctttgtggcaacatctttaactgaccg 568 |||||| ||||||| |||||||||||||| |||| |||||| |||||||| Sbjct: 22830173 tgactcgtttttatctggcaatctctttgcagcaagatcttttactgaccg 22830123 Score = 44.1 bits (22), Expect = 0.61 Identities = 31/34 (91%) Strand = Plus / Minus Query: 388 cttcaagctctgccagcctttgcaagactaacga 421 ||||||| ||| ||||||||||||||||| |||| Sbjct: 22830303 cttcaagatctaccagcctttgcaagactgacga 22830270
>dbj|AP003617.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0502H06 Length = 165630 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 518 tgactcatttttatgtggcaatctctttgtggcaacatctttaactgaccg 568 |||||| ||||||| |||||||||||||| |||| |||||| |||||||| Sbjct: 4982 tgactcgtttttatctggcaatctctttgcagcaagatcttttactgaccg 4932 Score = 44.1 bits (22), Expect = 0.61 Identities = 31/34 (91%) Strand = Plus / Minus Query: 388 cttcaagctctgccagcctttgcaagactaacga 421 ||||||| ||| ||||||||||||||||| |||| Sbjct: 5112 cttcaagatctaccagcctttgcaagactgacga 5079
>dbj|AP003622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0633E08 Length = 136471 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 518 tgactcatttttatgtggcaatctctttgtggcaacatctttaactgaccg 568 |||||| ||||||| |||||||||||||| |||| |||||| |||||||| Sbjct: 117124 tgactcgtttttatctggcaatctctttgcagcaagatcttttactgaccg 117074 Score = 44.1 bits (22), Expect = 0.61 Identities = 31/34 (91%) Strand = Plus / Minus Query: 388 cttcaagctctgccagcctttgcaagactaacga 421 ||||||| ||| ||||||||||||||||| |||| Sbjct: 117254 cttcaagatctaccagcctttgcaagactgacga 117221
>dbj|AP004942.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT43P05, TM0113, complete sequence Length = 101270 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 287 ctcagcttccagtgcatccacacggcggacagcagcattaagcaactcttctttctcgca 346 ||||||||||| |||||||| |||| ||||||||||| | ||| || ||||||||| | Sbjct: 73135 ctcagcttccaaagcatccacccggcatacagcagcattcaacaattcctctttctcgta 73076 Query: 347 aggcat 352 |||||| Sbjct: 73075 aggcat 73070
>ref|NM_106191.3| Arabidopsis thaliana transporter AT1G75370 mRNA, complete cds Length = 2152 Score = 44.1 bits (22), Expect = 0.61 Identities = 52/62 (83%) Strand = Plus / Minus Query: 282 atgagctcagcttccagtgcatccacacggcggacagcagcattaagcaactcttctttc 341 |||||||| ||||| ||||||||||| || ||||| | |||||||||||| |||||| Sbjct: 1827 atgagctctgcttcaagtgcatccacgcgataaacagctgtattaagcaactcctctttc 1768 Query: 342 tc 343 || Sbjct: 1767 tc 1766
>gb|AC123863.4| Mus musculus BAC clone RP23-364A19 from chromosome 5, complete sequence Length = 218179 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 426 aggtcagattcagcaaacccag 447 |||||||||||||||||||||| Sbjct: 52373 aggtcagattcagcaaacccag 52352
>emb|BX815255.1|CNS0AAT4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS47ZB03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2132 Score = 44.1 bits (22), Expect = 0.61 Identities = 52/62 (83%) Strand = Plus / Minus Query: 282 atgagctcagcttccagtgcatccacacggcggacagcagcattaagcaactcttctttc 341 |||||||| ||||| ||||||||||| || ||||| | |||||||||||| |||||| Sbjct: 1809 atgagctctgcttcaagtgcatccacgcgataaacagctgtattaagcaactcctctttc 1750 Query: 342 tc 343 || Sbjct: 1749 tc 1748
>gb|AC023754.3|AC023754 Arabidopsis thaliana chromosome I BAC F1B16 genomic sequence, complete sequence Length = 100685 Score = 44.1 bits (22), Expect = 0.61 Identities = 52/62 (83%) Strand = Plus / Minus Query: 282 atgagctcagcttccagtgcatccacacggcggacagcagcattaagcaactcttctttc 341 |||||||| ||||| ||||||||||| || ||||| | |||||||||||| |||||| Sbjct: 84826 atgagctctgcttcaagtgcatccacgcgataaacagctgtattaagcaactcctctttc 84767 Query: 342 tc 343 || Sbjct: 84766 tc 84765
>dbj|AK118304.1| Arabidopsis thaliana At1g75370 mRNA for putative sec14 cytosolic factor, complete cds, clone: RAFL19-59-B02 Length = 2151 Score = 44.1 bits (22), Expect = 0.61 Identities = 52/62 (83%) Strand = Plus / Minus Query: 282 atgagctcagcttccagtgcatccacacggcggacagcagcattaagcaactcttctttc 341 |||||||| ||||| ||||||||||| || ||||| | |||||||||||| |||||| Sbjct: 1827 atgagctctgcttcaagtgcatccacgcgataaacagctgtattaagcaactcctctttc 1768 Query: 342 tc 343 || Sbjct: 1767 tc 1766
>ref|NM_203088.1| Arabidopsis thaliana EIF2 BETA AT5G20920 (EIF2 BETA) transcript variant AT5G20920.2 mRNA, complete cds Length = 1151 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 ttggcttcttcttctttttct 195 ||||||||||||||||||||| Sbjct: 280 ttggcttcttcttctttttct 260
>ref|NM_122100.2| Arabidopsis thaliana EIF2 BETA AT5G20920 (EIF2 BETA) transcript variant AT5G20920.1 mRNA, complete cds Length = 1194 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 ttggcttcttcttctttttct 195 ||||||||||||||||||||| Sbjct: 323 ttggcttcttcttctttttct 303
>gb|AC118285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1206_C08, complete sequence Length = 115026 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 299 tgcatccacacggcggacagcagcattaagcaa 331 |||||||||||||||||| || ||||| ||||| Sbjct: 79265 tgcatccacacggcggacggctgcattcagcaa 79233
>ref|XM_718047.1| Candida albicans SC5314 cytosolic ribosomal acidic protein P2B (CaO19_5928), mRNA Length = 336 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 ttggcttcttcttctttttct 195 ||||||||||||||||||||| Sbjct: 293 ttggcttcttcttctttttct 273
>ref|XM_717900.1| Candida albicans SC5314 cytosolic ribosomal acidic protein P2B (CaO19_13349), mRNA Length = 336 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 ttggcttcttcttctttttct 195 ||||||||||||||||||||| Sbjct: 293 ttggcttcttcttctttttct 273
>ref|XM_716398.1| Candida albicans SC5314 hypothetical protein (CaO19_2993), mRNA Length = 315 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 175 ttggcttcttcttctttttct 195 ||||||||||||||||||||| Sbjct: 22 ttggcttcttcttctttttct 42
>ref|XM_716397.1| Candida albicans SC5314 cytosolic ribosomal acidic protein P1A (CaO19_2992), mRNA Length = 321 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 ttggcttcttcttctttttct 195 ||||||||||||||||||||| Sbjct: 278 ttggcttcttcttctttttct 258
>ref|XM_716126.1| Candida albicans SC5314 hypothetical protein (CaO19_10510), mRNA Length = 315 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 175 ttggcttcttcttctttttct 195 ||||||||||||||||||||| Sbjct: 22 ttggcttcttcttctttttct 42
>ref|XM_716125.1| Candida albicans SC5314 cytosolic ribosomal acidic protein P1A (CaO19_10509), mRNA Length = 321 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 ttggcttcttcttctttttct 195 ||||||||||||||||||||| Sbjct: 278 ttggcttcttcttctttttct 258
>gb|U80448.1| Caenorhabditis elegans cosmid F59A3, complete sequence Length = 42663 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 gcttcttcttctttttctggg 198 ||||||||||||||||||||| Sbjct: 11543 gcttcttcttctttttctggg 11523
>gb|AC093131.2| Papio anubis clone RP41-51G4, complete sequence Length = 181049 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 179 cttcttcttctttttctgggc 199 ||||||||||||||||||||| Sbjct: 70678 cttcttcttctttttctgggc 70698
>gb|BT000056.1| Arabidopsis thaliana translation initiation factor eIF-2 beta chain-like protein (At5g20920) mRNA, complete cds Length = 844 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 ttggcttcttcttctttttct 195 ||||||||||||||||||||| Sbjct: 211 ttggcttcttcttctttttct 191
>emb|AL033497.1|CAC49C10 C.albicans cosmid Ca49C10 Length = 37825 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 175 ttggcttcttcttctttttct 195 ||||||||||||||||||||| Sbjct: 3465 ttggcttcttcttctttttct 3485
>dbj|AK061952.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-F02, full insert sequence Length = 1673 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 299 tgcatccacacggcggacagcagcattaagcaa 331 |||||||||||||||||| || ||||| ||||| Sbjct: 1188 tgcatccacacggcggacggctgcattcagcaa 1156
>ref|NM_204597.1| Gallus gallus eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa (EIF2S2), mRNA Length = 1405 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 ttggcttcttcttctttttct 195 ||||||||||||||||||||| Sbjct: 336 ttggcttcttcttctttttct 316
>gb|AY128324.1| Arabidopsis thaliana translation initiation factor eIF-2 beta chain-like protein (At5g20920) mRNA, complete cds Length = 1095 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 ttggcttcttcttctttttct 195 ||||||||||||||||||||| Sbjct: 282 ttggcttcttcttctttttct 262
>emb|CR385806.1| Gallus gallus finished cDNA, clone ChEST69l11 Length = 1390 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 ttggcttcttcttctttttct 195 ||||||||||||||||||||| Sbjct: 345 ttggcttcttcttctttttct 325
>ref|NM_182039.3| Caenorhabditis elegans F59A3.2b (F59A3.2) mRNA, complete cds Length = 2131 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 gcttcttcttctttttctggg 198 ||||||||||||||||||||| Sbjct: 86 gcttcttcttctttttctggg 66
>ref|NM_059216.2| Caenorhabditis elegans F59A3.2a (F59A3.2) mRNA, complete cds Length = 2943 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 gcttcttcttctttttctggg 198 ||||||||||||||||||||| Sbjct: 86 gcttcttcttctttttctggg 66
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 299 tgcatccacacggcggacagcagcattaagcaa 331 |||||||||||||||||| || ||||| ||||| Sbjct: 26841025 tgcatccacacggcggacggctgcattcagcaa 26840993
>emb|BX829594.1|CNS0A1BT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB23ZF01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1040 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 ttggcttcttcttctttttct 195 ||||||||||||||||||||| Sbjct: 280 ttggcttcttcttctttttct 260
>gb|AF317662.1|AF317662 Candida albicans 60S acidic ribosomal protein type P2-B (p2B) gene, complete cds Length = 481 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 ttggcttcttcttctttttct 195 ||||||||||||||||||||| Sbjct: 300 ttggcttcttcttctttttct 280
>gb|AF317659.1|AF317659 Candida albicans 60S acidic ribosomal protein type P1-A (p1A) gene, complete cds Length = 398 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 ttggcttcttcttctttttct 195 ||||||||||||||||||||| Sbjct: 285 ttggcttcttcttctttttct 265
>emb|AJ294707.1|GGA294707 Gallus gallus mRNA for eukaryote initiation factor 2B (EIF2B gene) Length = 1405 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 ttggcttcttcttctttttct 195 ||||||||||||||||||||| Sbjct: 336 ttggcttcttcttctttttct 316
>dbj|AK066240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052B04, full insert sequence Length = 2363 Score = 42.1 bits (21), Expect = 2.4 Identities = 30/33 (90%) Strand = Plus / Minus Query: 299 tgcatccacacggcggacagcagcattaagcaa 331 |||||||||||||||||| || ||||| ||||| Sbjct: 1878 tgcatccacacggcggacggctgcattcagcaa 1846
>gb|AY112429.1| Zea mays CL31479_3 mRNA sequence Length = 587 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 tacatcatctcaaacgccatc 108 ||||||||||||||||||||| Sbjct: 343 tacatcatctcaaacgccatc 323
>gb|AC152923.2| Mus musculus BAC clone RP24-267O6 from 5, complete sequence Length = 187438 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 656 ccaaagaagaaagagtctttg 676 ||||||||||||||||||||| Sbjct: 153178 ccaaagaagaaagagtctttg 153198
>ref|NM_120794.2| Arabidopsis thaliana unknown protein AT5G07120 mRNA, complete cds Length = 2005 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 gaaggtttttcttcaagcgc 376 |||||||||||||||||||| Sbjct: 929 gaaggtttttcttcaagcgc 948
>gb|AC109298.19| Mus musculus chromosome 3, clone RP24-271A4, complete sequence Length = 191546 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 tggcttcttcttctttttct 195 |||||||||||||||||||| Sbjct: 103768 tggcttcttcttctttttct 103787
>gb|AC115803.17| Mus musculus chromosome 8, clone RP23-410F24, complete sequence Length = 169100 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 acattggcttcttcttctttttct 195 ||||||||||||||||||| |||| Sbjct: 697 acattggcttcttcttcttcttct 674
>gb|AY730594.1| Salmonella enterica subsp. salamae serovar Greenside UDP-GlcNAc 4-epimerase (gne), UDP-glucose pyrophosporylase (galF), complete cds; O-antigen gene cluster, complete sequence; 6-phosphogluconate dehydrogenase (gnd), putative GDP-colitose biosynthetic protein (col1), putative GDP-colitose biosynthetic protein (col2), UDP-glucose-6-dehydrogenase (ugd), O-antigen chain length determinant (wzz), and phosphoribosyl-AMP cyclohydrolase (hisI) genes, complete cds Length = 21532 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 cagattcagcaaacccagga 449 |||||||||||||||||||| Sbjct: 20645 cagattcagcaaacccagga 20664
>gb|AC160243.10| Mus musculus chromosome 8, clone RP24-130G22, complete sequence Length = 154337 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 172 acattggcttcttcttctttttct 195 ||||||||||||||||||| |||| Sbjct: 21293 acattggcttcttcttcttcttct 21316
>gb|AC159455.1| Trypanosoma brucei chromosome 5 clone RPCI93-6E7, complete sequence Length = 170328 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 cttcttcttctttttctgggcctt 202 |||||||||||||| ||||||||| Sbjct: 5309 cttcttcttcttttcctgggcctt 5332
>ref|XM_456781.1| Debaryomyces hansenii CBS767 DhTRK1 (DhTRK1) partial mRNA Length = 3153 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 ttggcttcttcttctttttc 194 |||||||||||||||||||| Sbjct: 1552 ttggcttcttcttctttttc 1533
>gb|AC124437.4| Mus musculus BAC clone RP24-257N6 from chromosome 3, complete sequence Length = 149145 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 agcaagacattggcttcttc 185 |||||||||||||||||||| Sbjct: 146875 agcaagacattggcttcttc 146894
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 accttggcttcaagctctgc 400 |||||||||||||||||||| Sbjct: 4877208 accttggcttcaagctctgc 4877189 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 cagcttccagtgcatccaca 308 |||||||||||||||||||| Sbjct: 1902582 cagcttccagtgcatccaca 1902563
>gb|BT012971.1| Lycopersicon esculentum clone 114181F, mRNA sequence Length = 865 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tggcttcttcttctttttct 195 |||||||||||||||||||| Sbjct: 51 tggcttcttcttctttttct 32
>gb|AC132844.7| Mus musculus chromosome 17, clone RP24-481P13, complete sequence Length = 225183 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 gtctctctccttgtcctagt 165 |||||||||||||||||||| Sbjct: 17800 gtctctctccttgtcctagt 17781
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 cagcttccagtgcatccaca 308 |||||||||||||||||||| Sbjct: 4225697 cagcttccagtgcatccaca 4225716
>gb|AC024204.1| Caenorhabditis elegans cosmid Y73B6A, complete sequence Length = 93268 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 acatcatctcaaacgccatc 108 |||||||||||||||||||| Sbjct: 87882 acatcatctcaaacgccatc 87863
>gb|AC125166.3| Mus musculus BAC clone RP24-435J4 from chromosome 18, complete sequence Length = 174565 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 tacaatgagctcagcttcca 297 |||||||||||||||||||| Sbjct: 17037 tacaatgagctcagcttcca 17056
>gb|AC147144.2| Pan troglodytes BAC clone CH251-278J22 from Y, complete sequence Length = 178957 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 483 atgcagtcttgatatattgaagaa 506 |||||||||| ||||||||||||| Sbjct: 146410 atgcagtcttaatatattgaagaa 146387
>gb|AY493413.1| Caenorhabditis elegans LIN-45 isoform 2 mRNA, complete cds Length = 3208 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 acatcatctcaaacgccatc 108 |||||||||||||||||||| Sbjct: 13 acatcatctcaaacgccatc 32
>gb|AY455928.1| Caenorhabditis elegans LIN-45 (lin-45) mRNA, complete cds Length = 3216 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 acatcatctcaaacgccatc 108 |||||||||||||||||||| Sbjct: 21 acatcatctcaaacgccatc 40
>gb|AC134570.5| Mus musculus BAC clone RP24-252B18 from chromosome 18, complete sequence Length = 183551 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 tacaatgagctcagcttcca 297 |||||||||||||||||||| Sbjct: 166062 tacaatgagctcagcttcca 166081
>gb|AC132259.3| Mus musculus BAC clone RP24-369B15 from chromosome 3, complete sequence Length = 131182 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 34 ccatgtatgtctttttcacatttgtcag 61 |||||||| |||||||||||||||||| Sbjct: 73784 ccatgtattactttttcacatttgtcag 73811
>gb|AC122843.2| Mus musculus BAC clone RP23-149L20 from 6, complete sequence Length = 207070 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 tcagaaaaaggaaaactgaa 137 |||||||||||||||||||| Sbjct: 73312 tcagaaaaaggaaaactgaa 73293
>gb|AC121903.2| Mus musculus BAC clone RP24-174G24 from 18, complete sequence Length = 172114 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 48 ttcacatttgtcaggaaaacgaac 71 ||||||||||| |||||||||||| Sbjct: 101626 ttcacatttgttaggaaaacgaac 101603
>ref|XM_669098.1| Plasmodium berghei strain ANKA hypothetical protein (PB001027.01.0) partial mRNA Length = 2028 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 atctcagaaaaaggaaaact 134 |||||||||||||||||||| Sbjct: 276 atctcagaaaaaggaaaact 295
>emb|AL035706.10|HS836J3 Human DNA sequence from clone RP5-836J3 on chromosome 1p22.1-31.1 Contains a novel gene (FLJ40403), the 3' end of the gene for a novel protein containing a tubulin-tyrosine ligase family domain (FLJ44842, FLJ23033 and FLJ36855) and a novel gene, complete sequence Length = 143590 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 cagtcttgatatattgaaga 505 |||||||||||||||||||| Sbjct: 36724 cagtcttgatatattgaaga 36743
>ref|XM_968464.1| PREDICTED: Tribolium castaneum similar to CG11670-PA (LOC662364), mRNA Length = 246 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 ttcttcttctttttctgggc 199 |||||||||||||||||||| Sbjct: 233 ttcttcttctttttctgggc 214
>emb|Z17278.1|SECLDB S.enterica cld gene for O-antigen chain length determinant Length = 2948 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 cagattcagcaaacccagga 449 |||||||||||||||||||| Sbjct: 2481 cagattcagcaaacccagga 2500
>gb|AE008792.1| Salmonella typhimurium LT2, section 96 of 220 of the complete genome Length = 22043 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 cagattcagcaaacccagga 449 |||||||||||||||||||| Sbjct: 409 cagattcagcaaacccagga 390
>emb|CR382133.1| Debaryomyces hansenii chromosome A of strain CBS767 of Debaryomyces hansenii Length = 1249565 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 ttggcttcttcttctttttc 194 |||||||||||||||||||| Sbjct: 871349 ttggcttcttcttctttttc 871368
>emb|AL627273.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 9/20 Length = 250050 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 cagattcagcaaacccagga 449 |||||||||||||||||||| Sbjct: 62951 cagattcagcaaacccagga 62932
>emb|AL163652.1|ATT28J14 Arabidopsis thaliana DNA chromosome 5, BAC clone T28J14 (ESSA project) Length = 104607 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 357 gaaggtttttcttcaagcgc 376 |||||||||||||||||||| Sbjct: 12841 gaaggtttttcttcaagcgc 12822
>emb|AL161502.2|ATCHRIV14 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 14 Length = 198563 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gcttcttcttctttttctgg 197 |||||||||||||||||||| Sbjct: 122686 gcttcttcttctttttctgg 122667
>gb|AC124907.3| Equus caballus clone CH241-409I22, complete sequence Length = 202157 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 147 tctctctccttgtcctagtagcaa 170 |||||||||||||||||| ||||| Sbjct: 43405 tctctctccttgtcctagcagcaa 43382
>gb|AC122176.2| Homo sapiens chromosome 3 clone RP11-294O18, complete sequence Length = 176367 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 aaccttggcttcaagctctg 399 |||||||||||||||||||| Sbjct: 14758 aaccttggcttcaagctctg 14777
>gb|AC154413.3| Mus musculus BAC clone RP24-230J5 from chromosome 13, complete sequence Length = 174730 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tggcttcttcttctttttct 195 |||||||||||||||||||| Sbjct: 86485 tggcttcttcttctttttct 86466
>dbj|BS000638.2| Pan troglodytes chromosome Y clone: PTBY-011C06, complete sequence Length = 86985 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 483 atgcagtcttgatatattgaagaa 506 |||||||||| ||||||||||||| Sbjct: 68746 atgcagtcttaatatattgaagaa 68723
>dbj|BS000660.1| Pan troglodytes chromosome Y clone:PTBY-005M17, complete sequences Length = 93004 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 483 atgcagtcttgatatattgaagaa 506 |||||||||| ||||||||||||| Sbjct: 51173 atgcagtcttaatatattgaagaa 51150
>gb|AC123900.2| Homo sapiens chromosome 3 clone RP11-640D6, complete sequence Length = 166485 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 aaccttggcttcaagctctg 399 |||||||||||||||||||| Sbjct: 143569 aaccttggcttcaagctctg 143588
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 483 atgcagtcttgatatattgaagaa 506 |||||||||| ||||||||||||| Sbjct: 19500976 atgcagtcttaatatattgaagaa 19500999
>dbj|AK055518.1| Homo sapiens cDNA FLJ30956 fis, clone HCASM2000202 Length = 1981 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tggcttcttcttctttttct 195 |||||||||||||||||||| Sbjct: 24 tggcttcttcttctttttct 5
>gb|AC006436.5| Arabidopsis thaliana chromosome 2 clone F13J11 map mi398, complete sequence Length = 104009 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 gcttcttcttctttttctgg 197 |||||||||||||||||||| Sbjct: 42368 gcttcttcttctttttctgg 42387
>gb|AC092612.3| Homo sapiens BAC clone RP11-174F8 from 4, complete sequence Length = 145706 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 tctctctccttgtcctagta 166 |||||||||||||||||||| Sbjct: 10341 tctctctccttgtcctagta 10322
>gb|AC090151.10| Homo sapiens chromosome 8, clone RP11-550I15, complete sequence Length = 166079 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 gaaccaagggagtctctctc 154 |||||||||||||||||||| Sbjct: 110973 gaaccaagggagtctctctc 110954
>ref|XM_942897.1| PREDICTED: Homo sapiens hypothetical protein LOC647582 (LOC647582), mRNA Length = 839 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 595 aagccatcagagctggaata 614 |||||||||||||||||||| Sbjct: 322 aagccatcagagctggaata 341
>ref|XM_933056.1| PREDICTED: Homo sapiens hypothetical protein LOC645687 (LOC645687), mRNA Length = 1127 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 595 aagccatcagagctggaata 614 |||||||||||||||||||| Sbjct: 610 aagccatcagagctggaata 629
>ref|XM_692734.1| PREDICTED: Danio rerio similar to bromodomain containing 2 (LOC569354), mRNA Length = 1859 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tggcttcttcttctttttct 195 |||||||||||||||||||| Sbjct: 1739 tggcttcttcttctttttct 1720
>gb|CP000237.1| Neorickettsia sennetsu strain Miyayama, complete genome Length = 859006 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 489 tcttgatatattgaagaactttgttcat 516 ||||||||||| ||||||||| |||||| Sbjct: 42469 tcttgatatatggaagaacttggttcat 42496
>dbj|AK220586.1| Arabidopsis thaliana mRNA for putative protein, partial cds, clone: RAFL17-28-B05 Length = 1164 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 357 gaaggtttttcttcaagcgc 376 |||||||||||||||||||| Sbjct: 908 gaaggtttttcttcaagcgc 927
>ref|NM_171368.1| Caenorhabditis elegans abnormal cell LINeage family member (lin-45) (lin-45) mRNA, complete cds Length = 1845 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 acatcatctcaaacgccatc 108 |||||||||||||||||||| Sbjct: 85 acatcatctcaaacgccatc 104
>ref|NM_171367.3| Caenorhabditis elegans abnormal cell LINeage family member (lin-45) (lin-45) mRNA, complete cds Length = 3204 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 acatcatctcaaacgccatc 108 |||||||||||||||||||| Sbjct: 21 acatcatctcaaacgccatc 40
>dbj|AK030962.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830471B11 product:unclassifiable, full insert sequence Length = 4788 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 tggcttcttcttctttttct 195 |||||||||||||||||||| Sbjct: 4656 tggcttcttcttctttttct 4675
>gb|AC073848.4|AC073848 Homo sapiens BAC clone RP11-669M16 from 4, complete sequence Length = 163636 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tggcttcttcttctttttct 195 |||||||||||||||||||| Sbjct: 113858 tggcttcttcttctttttct 113839
>gb|AF353095.1|AF353095 Arabidopsis thaliana protein synthesis initiation factor eIF2 beta mRNA, complete cds Length = 1160 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tggcttcttcttctttttct 195 |||||||||||||||||||| Sbjct: 308 tggcttcttcttctttttct 289
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 gcttcttcttctttttctgg 197 |||||||||||||||||||| Sbjct: 12950155 gcttcttcttctttttctgg 12950174
>gb|AC010723.3|AC010723 Homo sapiens BAC clone RP11-139C10 from Y, complete sequence Length = 174420 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 483 atgcagtcttgatatattgaagaa 506 |||||||||| ||||||||||||| Sbjct: 122642 atgcagtcttaatatattgaagaa 122665
>gb|AY087810.1| Arabidopsis thaliana clone 3855 mRNA, complete sequence Length = 1134 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 tggcttcttcttctttttct 195 |||||||||||||||||||| Sbjct: 321 tggcttcttcttctttttct 302
>gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1 Length = 96102 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 tggcttcttcttctttttct 195 |||||||||||||||||||| Sbjct: 39926 tggcttcttcttctttttct 39945
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 cagattcagcaaacccagga 449 |||||||||||||||||||| Sbjct: 888451 cagattcagcaaacccagga 888470
>dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077F02 Length = 172442 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 gcttcttcttctttttctgg 197 |||||||||||||||||||| Sbjct: 24452 gcttcttcttctttttctgg 24471
>dbj|BS000198.1| Pan troglodytes chromosome 22 clone:RP43-091A22, map 22, complete sequences Length = 181880 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 accttggcttcaagctctgc 400 |||||||||||||||||||| Sbjct: 139814 accttggcttcaagctctgc 139795
>emb|AL929270.14| Mouse DNA sequence from clone RP23-100K15 on chromosome X, complete sequence Length = 115038 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 acattggcttcttcttctttttct 195 ||||||| |||||||||||||||| Sbjct: 112746 acattggtttcttcttctttttct 112723
>ref|XM_320711.2| Anopheles gambiae str. PEST ENSANGP00000008820 (ENSANGG00000006647), partial mRNA Length = 1782 Score = 40.1 bits (20), Expect = 9.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 180 ttcttcttctttttctgggccttggcaa 207 ||||||||||||||||| ||||||||| Sbjct: 1775 ttcttcttctttttctgctccttggcaa 1748
>gb|AC024862.1|AC024862 Caenorhabditis elegans clone Y73B6A, complete sequence Length = 93268 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 acatcatctcaaacgccatc 108 |||||||||||||||||||| Sbjct: 87882 acatcatctcaaacgccatc 87863
>gb|AC012392.1|AC012392 Genomic Sequence For Arabidopsis thaliana clone C17L7, Chromosome IV, complete sequence Length = 183147 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 gcttcttcttctttttctgg 197 |||||||||||||||||||| Sbjct: 130423 gcttcttcttctttttctgg 130442
>gb|AC154853.2| Mus musculus BAC clone RP23-21C15 from 17, complete sequence Length = 170353 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 gtctctctccttgtcctagt 165 |||||||||||||||||||| Sbjct: 107978 gtctctctccttgtcctagt 107959
>gb|AF162444.1|T32N4 Arabidopsis thaliana BAC T32N4 Length = 80196 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gcttcttcttctttttctgg 197 |||||||||||||||||||| Sbjct: 61161 gcttcttcttctttttctgg 61142
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 cagattcagcaaacccagga 449 |||||||||||||||||||| Sbjct: 889977 cagattcagcaaacccagga 889996
>emb|AL162311.5|CNS01RHR Human chromosome 14 DNA sequence BAC R-317N8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 167127 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 ttcttcttctttttctgggc 199 |||||||||||||||||||| Sbjct: 20033 ttcttcttctttttctgggc 20052
>emb|AL355773.4|CNS05TCO Human chromosome 14 DNA sequence BAC R-813I20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 216647 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 595 aagccatcagagctggaata 614 |||||||||||||||||||| Sbjct: 108783 aagccatcagagctggaata 108802
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 cagattcagcaaacccagga 449 |||||||||||||||||||| Sbjct: 2178473 cagattcagcaaacccagga 2178454
>gb|AC125020.7| Mus musculus chromosome 12, clone RP24-181E5, complete sequence Length = 200586 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 ctcagaaaaaggaaaactga 136 |||||||||||||||||||| Sbjct: 114809 ctcagaaaaaggaaaactga 114790
>emb|AJ620491.1| Olea europaea putative gypsy retrotransposon partial integrase pseudogene and LTR, clone Oeg05 Length = 964 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 ttggcttcttcttctttttc 194 |||||||||||||||||||| Sbjct: 515 ttggcttcttcttctttttc 496
>emb|AJ620490.1| Olea europaea putative gypsy retrotransposon partial integrase pseudogene and LTR, clone Oeg04 Length = 1390 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 ttggcttcttcttctttttc 194 |||||||||||||||||||| Sbjct: 513 ttggcttcttcttctttttc 494
>gb|AC131698.4| Mus musculus BAC clone RP23-428E12 from 3, complete sequence Length = 191438 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 agcaagacattggcttcttc 185 |||||||||||||||||||| Sbjct: 170554 agcaagacattggcttcttc 170535
>gb|AC170088.9| Mus musculus BAC RP23-94A1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 253441 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 tcagaaaaaggaaaactgaa 137 |||||||||||||||||||| Sbjct: 253397 tcagaaaaaggaaaactgaa 253378
>dbj|AP006666.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT46L11, TM0365, complete sequence Length = 122449 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 581 aatagcaatcacaaaagcca 600 |||||||||||||||||||| Sbjct: 51800 aatagcaatcacaaaagcca 51819
>gb|DP000020.1| Equus caballus target 1 genomic scaffold Length = 1907055 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 147 tctctctccttgtcctagtagcaa 170 |||||||||||||||||| ||||| Sbjct: 551599 tctctctccttgtcctagcagcaa 551576
>gb|AC158644.13| Mus musculus 6 BAC RP23-479B14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 161541 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 tcagaaaaaggaaaactgaa 137 |||||||||||||||||||| Sbjct: 160527 tcagaaaaaggaaaactgaa 160508
>emb|AL672287.12| Mouse DNA sequence from clone RP23-151I8 on chromosome X, complete sequence Length = 81776 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 172 acattggcttcttcttctttttct 195 ||||||| |||||||||||||||| Sbjct: 79484 acattggtttcttcttctttttct 79461
>gb|M27296.1|SUSEND16 Sea urchin (S.purpuratus) Endo16 gene, partial cds Length = 794 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 cttcttcttctttttctggg 198 |||||||||||||||||||| Sbjct: 778 cttcttcttctttttctggg 759
>gb|L15347.1|CELRAF Caenorhabditis elegans (clone pSK(+)raf107a) raf proto-oncogene mRNA, complete cds Length = 3216 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 acatcatctcaaacgccatc 108 |||||||||||||||||||| Sbjct: 13 acatcatctcaaacgccatc 32
>gb|M89933.1|STYREGPOL Salmonella typhimurium polysaccharide antigen chain regulator gene Length = 1198 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 cagattcagcaaacccagga 449 |||||||||||||||||||| Sbjct: 781 cagattcagcaaacccagga 800 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8,600,842 Number of Sequences: 3902068 Number of extensions: 8600842 Number of successful extensions: 205322 Number of sequences better than 10.0: 133 Number of HSP's better than 10.0 without gapping: 129 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 204485 Number of HSP's gapped (non-prelim): 826 length of query: 694 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 671 effective length of database: 17,143,297,704 effective search space: 11503152759384 effective search space used: 11503152759384 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)