>gb|AC134591.4| Mus musculus BAC clone RP23-376L4 from chromosome 19, complete sequence
          Length = 222814

 Score = 42.1 bits (21), Expect = 0.050
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 5      taacattaaactacatatgca 25
              |||||||||||||||||||||
Sbjct: 127061 taacattaaactacatatgca 127041

>gb|AC165080.4| Mus musculus BAC clone RP24-93F20 from chromosome 9, complete sequence
          Length = 194427

 Score = 38.2 bits (19), Expect = 0.78
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 14    actacatatgcacaacagt 32
             |||||||||||||||||||
Sbjct: 97298 actacatatgcacaacagt 97316

>gb|AC140381.3| Mus musculus BAC clone RP23-176M4 from 10, complete sequence
          Length = 223470

 Score = 38.2 bits (19), Expect = 0.78
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 12     aaactacatatgcacaaca 30
              |||||||||||||||||||
Sbjct: 199509 aaactacatatgcacaaca 199491

>gb|AC109832.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone P0038B07,
              complete sequence
          Length = 149697

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 5      taacattaaactacatat 22
              ||||||||||||||||||
Sbjct: 117169 taacattaaactacatat 117152

>gb|AC166096.2| Mus musculus BAC clone RP24-467F14 from chromosome 9, complete sequence
          Length = 142142

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Plus

                               
Query: 8     cattaaactacatatgca 25
             ||||||||||||||||||
Sbjct: 57712 cattaaactacatatgca 57729

>emb|CR457445.15| Zebrafish DNA sequence from clone CH211-204C5 in linkage group 8,
             complete sequence
          Length = 155181

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 21/22 (95%)
 Strand = Plus / Minus

                                   
Query: 6     aacattaaactacatatgcaca 27
             ||||||||| ||||||||||||
Sbjct: 60429 aacattaaattacatatgcaca 60408

>emb|AL355984.11| Human DNA sequence from clone RP11-501K3 on chromosome 13 Contains the
              GJB6 gene for gap junction protein, beta 6 (connexin 30)
              and 2 CpG islands, complete sequence
          Length = 160536

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                
Query: 14     actacatatgcacaacag 31
              ||||||||||||||||||
Sbjct: 111213 actacatatgcacaacag 111196

>emb|BX897714.6| Zebrafish DNA sequence from clone DKEY-218L23 in linkage group 25,
            complete sequence
          Length = 184435

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 21/22 (95%)
 Strand = Plus / Plus

                                  
Query: 3    cttaacattaaactacatatgc 24
            ||||||||||||||||| ||||
Sbjct: 981  cttaacattaaactacaaatgc 1002

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                  
Query: 5        taacattaaactacatat 22
                ||||||||||||||||||
Sbjct: 23781131 taacattaaactacatat 23781114

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                                  
Query: 5        taacattaaactacatat 22
                ||||||||||||||||||
Sbjct: 24092800 taacattaaactacatat 24092783

>emb|AL732565.9| Mouse DNA sequence from clone RP23-318A9 on chromosome 4, complete
            sequence
          Length = 203128

 Score = 36.2 bits (18), Expect = 3.1
 Identities = 18/18 (100%)
 Strand = Plus / Minus

                              
Query: 5    taacattaaactacatat 22
            ||||||||||||||||||
Sbjct: 6352 taacattaaactacatat 6335


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 327,448
Number of Sequences: 3902068
Number of extensions: 327448
Number of successful extensions: 77071
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77008
Number of HSP's gapped (non-prelim): 63
length of query: 34
length of database: 17,233,045,268
effective HSP length: 20
effective length of query: 14
effective length of database: 17,155,003,908
effective search space: 240170054712
effective search space used: 240170054712
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 18 (36.2 bits)