ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags16e12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1WIF1_XENLA (Q9W6F8) Wnt inhibitory factor 1 precursor (WIF-1) 32 2.4
2WIF1_BRARE (Q9W6F9) Wnt inhibitory factor 1 precursor (WIF-1) 31 4.2
3WIF1_RAT (Q6IN38) Wnt inhibitory factor 1 precursor (WIF-1) 31 4.2
4WIF1_MOUSE (Q9WUA1) Wnt inhibitory factor 1 precursor (WIF-1) 31 4.2
5YAA7_SCHPO (Q09800) Hypothetical protein C22G7.07c in chromosome I 30 5.4
6ATL2L_ARATH (Q9SLC3) RING-H2 finger protein ATL2L 30 7.1
7WIF1_HUMAN (Q9Y5W5) Wnt inhibitory factor 1 precursor (WIF-1) 30 7.1

>WIF1_XENLA (Q9W6F8) Wnt inhibitory factor 1 precursor (WIF-1)|
          Length = 374

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 630 CPGCFFGIHCQRALCK*RLWRNAVC 556
           CP  F+G HC++ALC  R     +C
Sbjct: 195 CPDGFYGPHCEKALCMPRCMNGGLC 219



to top

>WIF1_BRARE (Q9W6F9) Wnt inhibitory factor 1 precursor (WIF-1)|
          Length = 378

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 630 CPGCFFGIHCQRALCK*RLWRNAVC 556
           C   F+G+HC++ALC  R     +C
Sbjct: 198 CQDGFYGVHCEKALCSPRCLNGGLC 222



to top

>WIF1_RAT (Q6IN38) Wnt inhibitory factor 1 precursor (WIF-1)|
          Length = 379

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 630 CPGCFFGIHCQRALCK*RLWRNAVC 556
           CP  F+G HC++ALC  R     +C
Sbjct: 200 CPDGFYGPHCEKALCIPRCMNGGLC 224



to top

>WIF1_MOUSE (Q9WUA1) Wnt inhibitory factor 1 precursor (WIF-1)|
          Length = 379

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 630 CPGCFFGIHCQRALCK*RLWRNAVC 556
           CP  F+G HC++ALC  R     +C
Sbjct: 200 CPDGFYGPHCEKALCIPRCMNGGLC 224



to top

>YAA7_SCHPO (Q09800) Hypothetical protein C22G7.07c in chromosome I|
          Length = 413

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +2

Query: 47  WSYKSLSTWTWLNFNSYTKPLPDSFT 124
           W+   +STWTWL   ++ +PL D ++
Sbjct: 294 WNLTLVSTWTWLKITAFGEPLFDVYS 319



to top

>ATL2L_ARATH (Q9SLC3) RING-H2 finger protein ATL2L|
          Length = 236

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +2

Query: 530 DNHSFWPNPQTAFLHRRYLQSA 595
           D+HSFWPNP T  L+ + + +A
Sbjct: 14  DHHSFWPNPSTYDLNSKIMLAA 35



to top

>WIF1_HUMAN (Q9Y5W5) Wnt inhibitory factor 1 precursor (WIF-1)|
          Length = 379

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 630 CPGCFFGIHCQRALCK*RLWRNAVC 556
           CP  F G HC++ALC  R     +C
Sbjct: 200 CPDGFHGPHCEKALCTPRCMNGGLC 224


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 99,474,629
Number of Sequences: 219361
Number of extensions: 2045845
Number of successful extensions: 4603
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4602
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7026286028
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top