ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags15p05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_483349.1| Oryza sativa (japonica cultivar-group), mRNA 74 6e-10
2dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 74 6e-10
3dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic D... 74 6e-10
4dbj|AP004708.3| Oryza sativa (japonica cultivar-group) genomic D... 74 6e-10
5gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete seq... 48 0.036
6dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, compl... 48 0.036
7emb|AL627169.8| Human DNA sequence from clone RP11-233E12 on chr... 46 0.14
8ref|XM_952028.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.56
9ref|XM_326335.1| Neurospora crassa OR74A hypothetical protein (N... 44 0.56
10gb|AC127553.3| Mus musculus BAC clone RP24-553F11 from chromosom... 44 0.56
11gb|AC005926.1| Homo sapiens Xp22-171-173 BAC GSHB-312I4 (Genome ... 44 0.56
12gb|AC110037.13| Mus musculus chromosome 5, clone RP23-257E17, co... 44 0.56
13gb|AC127312.4| Mus musculus BAC clone RP23-306F21 from 15, compl... 42 2.2
14gb|AC006041.2| Homo sapiens BAC clone RP11-491B3 from 7, complet... 42 2.2
15gb|AC182019.3| Felis catus clone RP86-75P21, complete sequence 42 2.2
16gb|AC091543.2| Felis catus clone RP86-588L5, complete sequence 42 2.2
17gb|AC092519.2| Felis catus clone RP86-328F23, complete sequence 42 2.2
18emb|AL139035.27| Human DNA sequence from clone RP11-214F16 on ch... 42 2.2
19gb|AY152836.1| Felis catus clone BAC 160a17 major histocompatibl... 42 2.2
20gb|AY152835.1| Felis catus clone PAC g7 major histocompatiblity ... 42 2.2
21dbj|AK083587.1| Mus musculus 9 days embryo whole body cDNA, RIKE... 42 2.2
22emb|BX649633.13| Zebrafish DNA sequence from clone CH211-127A20 ... 42 2.2
23gb|AC091696.3| Felis catus clone RP86-117J4, complete sequence 42 2.2
24emb|AL845493.5| Zebrafish DNA sequence from clone DKEYP-77C8 in ... 42 2.2
25ref|XM_634816.1| Dictyostelium discoideum hypothetical protein (... 40 8.7
26gb|AE017336.2| Bacillus anthracis str. 'Ames Ancestor' plasmid p... 40 8.7
27gb|AC068500.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 8.7
28gb|U70855.2| Caenorhabditis elegans cosmid K08F11, complete sequ... 40 8.7
29gb|AC024730.7| Homo sapiens BAC clone RP11-422E4 from 7, complet... 40 8.7
30emb|CR956427.7| Pig DNA sequence from clone CH242-51O7 on chromo... 40 8.7
31emb|AJ248287.2|CNSPAX05 Pyrococcus abyssi complete genome; segme... 40 8.7
32gb|AC084384.1| Mus musculus BAC clone RP23-24F24 from 15, comple... 40 8.7
33gb|AF065404.1| Bacillus anthracis virulence plasmid PX01, comple... 40 8.7
34gb|AC090469.9| Homo sapiens chromosome 11, clone RP11-734J23, co... 40 8.7
35emb|AL450345.6| Human DNA sequence from clone RP11-300M24 on chr... 40 8.7
36emb|AL390878.6| Human DNA sequence from clone RP11-442F12 on chr... 40 8.7
37gb|AC092003.3| Felis catus clone RP86-137F8, complete sequence 40 8.7
38emb|AL355796.11| Human DNA sequence from clone RP11-46B11 on chr... 40 8.7
39emb|AJ277892.2|HSA277892 Homo sapiens partial TTN gene for titin 40 8.7
40emb|BX957270.8| Zebrafish DNA sequence from clone DKEYP-14F10 in... 40 8.7
41gb|AC104606.6| Drosophila melanogaster X BAC RP98-26L11 (Roswell... 40 8.7
42gb|AE011190.1| Bacillus anthracis str. A2012 plasmid pXO1, compl... 40 8.7
43gb|AC100848.2| Homo sapiens chromosome 18, clone RP11-909B2, com... 40 8.7
44gb|AC114316.2| Homo sapiens chromosome 5 clone RP11-348J24, comp... 40 8.7
45gb|AC104336.2| Homo sapiens chromosome 1 clone RP4-783C10, compl... 40 8.7
46gb|AC108153.4| Homo sapiens BAC clone RP11-512B3 from 4, complet... 40 8.7
47gb|AC116332.2| Homo sapiens chromosome 5 clone CTD-2086E12, comp... 40 8.7
48gb|AC161011.8| Pan troglodytes BAC clone CH251-506K1 from chromo... 40 8.7
49gb|AC158760.4| Mus musculus chromosome 5, clone RP23-319E24, com... 40 8.7
50gb|AC163735.5| Pan troglodytes BAC clone CH251-576O12 from chrom... 40 8.7
51gb|AC161625.5| Pan troglodytes BAC clone CH251-98N20 from chromo... 40 8.7
52gb|AC009158.7| Homo sapiens chromosome 16 clone RP11-67I10, comp... 40 8.7
53gb|AC010680.10| Homo sapiens BAC clone RP11-171I2 from 2, comple... 40 8.7
54gb|AC174869.2| Pan troglodytes BAC clone CH251-558A1 from chromo... 40 8.7
55emb|CR936411.5| Zebrafish DNA sequence from clone CH211-265O23 i... 40 8.7
56emb|BX784401.3| Zebrafish DNA sequence from clone CH211-244B2 in... 40 8.7
57emb|AL929220.13| Zebrafish DNA sequence from clone DKEY-65B13 in... 40 8.7
58gb|AE003441.3| Drosophila melanogaster chromosome X, section 25 ... 40 8.7
59gb|AC111107.18| Mus musculus chromosome 5, clone RP23-195P3, com... 40 8.7
60dbj|AP002962.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 8.7
61emb|AL390860.10| Human DNA sequence from clone RP11-656O22 on ch... 40 8.7
62gb|AC122892.4| Mus musculus BAC clone RP23-66P19 from 8, complet... 40 8.7
63emb|AL161713.4|CNS01RHE Human chromosome 14 DNA sequence BAC R-2... 40 8.7 
>ref|XM_483349.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 681

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                
Query: 573 gccaccttccatacagagttgacatcataatgtcctcttatcctcaggtcagt 625
           |||||||||||||||||||||| |||||||| | ||||||||||| |||||||
Sbjct: 662 gccaccttccatacagagttgagatcataatctgctcttatcctcgggtcagt 610
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                     
Query: 573      gccaccttccatacagagttgacatcataatgtcctcttatcctcaggtcagt 625
                |||||||||||||||||||||| |||||||| | ||||||||||| |||||||
Sbjct: 25750691 gccaccttccatacagagttgagatcataatctgctcttatcctcgggtcagt 25750639
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>dbj|AP004622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0689E12
          Length = 147516

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                  
Query: 573   gccaccttccatacagagttgacatcataatgtcctcttatcctcaggtcagt 625
             |||||||||||||||||||||| |||||||| | ||||||||||| |||||||
Sbjct: 22902 gccaccttccatacagagttgagatcataatctgctcttatcctcgggtcagt 22850
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>dbj|AP004708.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0700D12
          Length = 145177

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 49/53 (92%)
 Strand = Plus / Minus

                                                                   
Query: 573    gccaccttccatacagagttgacatcataatgtcctcttatcctcaggtcagt 625
              |||||||||||||||||||||| |||||||| | ||||||||||| |||||||
Sbjct: 128439 gccaccttccatacagagttgagatcataatctgctcttatcctcgggtcagt 128387
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>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence
          Length = 3281944

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 76      gtgtacaaagattggaccaaaatt 99
               ||||||||||||||||||||||||
Sbjct: 2658923 gtgtacaaagattggaccaaaatt 2658946
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>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence
          Length = 3354505

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 76      gtgtacaaagattggaccaaaatt 99
               ||||||||||||||||||||||||
Sbjct: 1724392 gtgtacaaagattggaccaaaatt 1724369
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>emb|AL627169.8| Human DNA sequence from clone RP11-233E12 on chromosome 1 Contains a
             ATP synthase 6 (MTATP6) pseudogene, a cytochrome c oxidase
             II (MTCO2) pseudogene, a cytochrome c oxidase I (MTCO1)
             pseudogene and the 5' end of a novel gene, complete
             sequence
          Length = 34800

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 331   ataaccatttttctttattttgg 353
             |||||||||||||||||||||||
Sbjct: 26906 ataaccatttttctttattttgg 26928
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>ref|XM_952028.1| Neurospora crassa OR74A hypothetical protein (NCU06481.1) partial
           mRNA
          Length = 2772

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 493 cctccttcagcccctccacgacctccatca 522
           ||||||||| | ||||||||||||||||||
Sbjct: 352 cctccttcacctcctccacgacctccatca 323
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>ref|XM_326335.1| Neurospora crassa OR74A hypothetical protein (NCU06481.1) partial
           mRNA
          Length = 2772

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 493 cctccttcagcccctccacgacctccatca 522
           ||||||||| | ||||||||||||||||||
Sbjct: 352 cctccttcacctcctccacgacctccatca 323
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>gb|AC127553.3| Mus musculus BAC clone RP24-553F11 from chromosome 5, complete
            sequence
          Length = 159693

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 355  aaatgtatgtttatttttgaga 376
            ||||||||||||||||||||||
Sbjct: 7391 aaatgtatgtttatttttgaga 7370
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>gb|AC005926.1| Homo sapiens Xp22-171-173 BAC GSHB-312I4 (Genome Systems Human BAC
             Library) complete sequence
          Length = 95391

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 351   tggtaaatgtatgtttattttt 372
             ||||||||||||||||||||||
Sbjct: 44270 tggtaaatgtatgtttattttt 44249
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>gb|AC110037.13| Mus musculus chromosome 5, clone RP23-257E17, complete sequence
          Length = 177428

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 355   aaatgtatgtttatttttgaga 376
             ||||||||||||||||||||||
Sbjct: 81307 aaatgtatgtttatttttgaga 81328
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>gb|AC127312.4| Mus musculus BAC clone RP23-306F21 from 15, complete sequence
          Length = 194254

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 271   gtggattataagacatttggtagat 295
             |||||| ||||||||||||||||||
Sbjct: 48886 gtggataataagacatttggtagat 48862
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>gb|AC006041.2| Homo sapiens BAC clone RP11-491B3 from 7, complete sequence
          Length = 86758

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 364   tttatttttgagagatgtttc 384
             |||||||||||||||||||||
Sbjct: 47987 tttatttttgagagatgtttc 48007
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>gb|AC182019.3| Felis catus clone RP86-75P21, complete sequence
          Length = 58123

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 354   taaatgtatgtttatttttgagaga 378
             ||||||| |||||||||||||||||
Sbjct: 23362 taaatgtttgtttatttttgagaga 23338
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>gb|AC091543.2| Felis catus clone RP86-588L5, complete sequence
          Length = 166752

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 354   taaatgtatgtttatttttgagaga 378
             ||||||| |||||||||||||||||
Sbjct: 42366 taaatgtttgtttatttttgagaga 42390
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>gb|AC092519.2| Felis catus clone RP86-328F23, complete sequence
          Length = 178238

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 354    taaatgtatgtttatttttgagaga 378
              ||||||||| |||||||||||||||
Sbjct: 142704 taaatgtatatttatttttgagaga 142728
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>emb|AL139035.27| Human DNA sequence from clone RP11-214F16 on chromosome 13 Contains the
              TM9SF2 gene for transmembrane 9 superfamily member 2 (P76),
              three novel genes, a cofilin 1 (non-muscle) (CFL1)
              pseudogene, the 5' end of the CLYBL gene for citrate lyase
              beta like (CLB bA134O15.1) and two CpG islands, complete
              sequence
          Length = 157662

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 338    tttttctttattttggtaaat 358
              |||||||||||||||||||||
Sbjct: 147587 tttttctttattttggtaaat 147607
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>gb|AY152836.1| Felis catus clone BAC 160a17 major histocompatiblity complex classical
             class II region, partial sequence
          Length = 130898

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 354   taaatgtatgtttatttttgagaga 378
             ||||||| |||||||||||||||||
Sbjct: 25477 taaatgtttgtttatttttgagaga 25453
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>gb|AY152835.1| Felis catus clone PAC g7 major histocompatiblity complex classical
             class II region, partial sequence
          Length = 77680

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 354   taaatgtatgtttatttttgagaga 378
             ||||||| |||||||||||||||||
Sbjct: 47421 taaatgtttgtttatttttgagaga 47397
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>dbj|AK083587.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:D030050C19 product:similar to
            CHRONIC MYELOGENOUS LEUKEMIA TUMOR ANTIGEN 66 [Homo
            sapiens], full insert sequence
          Length = 2896

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 271  gtggattataagacatttggtagat 295
            |||||| ||||||||||||||||||
Sbjct: 1443 gtggataataagacatttggtagat 1467
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>emb|BX649633.13| Zebrafish DNA sequence from clone CH211-127A20 in linkage group 18,
              complete sequence
          Length = 164724

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 340    tttctttattttggtaaatgtatgtttattttt 372
              ||||||||||| ||||||| ||| |||||||||
Sbjct: 109049 tttctttatttcggtaaatttatttttattttt 109017
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>gb|AC091696.3| Felis catus clone RP86-117J4, complete sequence
          Length = 136083

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 354   taaatgtatgtttatttttgagaga 378
             ||||||| |||||||||||||||||
Sbjct: 50538 taaatgtttgtttatttttgagaga 50562
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>emb|AL845493.5| Zebrafish DNA sequence from clone DKEYP-77C8 in linkage group 20,
             complete sequence
          Length = 176916

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 338   tttttctttattttggtaaatgtatgttt 366
             ||||| ||| |||||||||||||||||||
Sbjct: 96851 ttttttttttttttggtaaatgtatgttt 96823
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>ref|XM_634816.1| Dictyostelium discoideum hypothetical protein (DDB0218648), partial
           mRNA
          Length = 1263

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 338 tttttctttattttggtaaatgta 361
           ||||| ||||||||||||||||||
Sbjct: 956 tttttatttattttggtaaatgta 979
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>gb|AE017336.2| Bacillus anthracis str. 'Ames Ancestor' plasmid pXO1, complete sequence
          Length = 181677

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 339   ttttctttattttggtaaat 358
             ||||||||||||||||||||
Sbjct: 24508 ttttctttattttggtaaat 24489
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>gb|AC068500.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-175C13, complete
              sequence
          Length = 201878

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 368    tttttgagagatgtttcacc 387
              ||||||||||||||||||||
Sbjct: 129591 tttttgagagatgtttcacc 129572
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>gb|U70855.2| Caenorhabditis elegans cosmid K08F11, complete sequence
          Length = 26520

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 80   acaaagattggaccaaaatt 99
            ||||||||||||||||||||
Sbjct: 7356 acaaagattggaccaaaatt 7337
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>gb|AC024730.7| Homo sapiens BAC clone RP11-422E4 from 7, complete sequence
          Length = 151198

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 361   atgtttatttttgagagatgtttc 384
             ||||||||||||||||||| ||||
Sbjct: 13780 atgtttatttttgagagatatttc 13803
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>emb|CR956427.7| Pig DNA sequence from clone CH242-51O7 on chromosome 6, complete sequence
          Length = 187800

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 483    agttgcaagccctccttcagcccc 506
              |||||||||||||||| |||||||
Sbjct: 149667 agttgcaagccctcctccagcccc 149690
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>emb|AJ248287.2|CNSPAX05 Pyrococcus abyssi complete genome; segment 5/6
          Length = 305600

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 494    ctccttcagcccctccacgacctc 517
              |||||||||||||||||| |||||
Sbjct: 265265 ctccttcagcccctccactacctc 265242
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>gb|AC084384.1| Mus musculus BAC clone RP23-24F24 from 15, complete sequence
          Length = 208833

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 339    ttttctttattttggtaaat 358
              ||||||||||||||||||||
Sbjct: 103944 ttttctttattttggtaaat 103963
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>gb|AF065404.1| Bacillus anthracis virulence plasmid PX01, complete sequence
          Length = 181654

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 339   ttttctttattttggtaaat 358
             ||||||||||||||||||||
Sbjct: 24374 ttttctttattttggtaaat 24355
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>gb|AC090469.9| Homo sapiens chromosome 11, clone RP11-734J23, complete sequence
          Length = 215308

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 343    ctttattttggtaaatgtatgttt 366
              |||||||||| |||||||||||||
Sbjct: 182098 ctttattttgataaatgtatgttt 182075
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>emb|AL450345.6| Human DNA sequence from clone RP11-300M24 on chromosome 6 Contains a
              novel gene, complete sequence
          Length = 183342

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 332    taaccatttttctttatttt 351
              ||||||||||||||||||||
Sbjct: 181436 taaccatttttctttatttt 181417
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>emb|AL390878.6| Human DNA sequence from clone RP11-442F12 on chromosome 13 Contains part
              of the DIAPH3 gene for diaphanous homolog 3 (Drosophila)
              and a novel gene, complete sequence
          Length = 209794

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 356    aatgtatgtttatttttgag 375
              ||||||||||||||||||||
Sbjct: 171716 aatgtatgtttatttttgag 171735
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>gb|AC092003.3| Felis catus clone RP86-137F8, complete sequence
          Length = 157615

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 355    aaatgtatgtttatttttgagaga 378
              |||||| |||||||||||||||||
Sbjct: 142416 aaatgtttgtttatttttgagaga 142393



 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 354   taaatgtatgtttatttttgagag 377
             ||||||| ||||||||||||||||
Sbjct: 23507 taaatgtttgtttatttttgagag 23530
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>emb|AL355796.11| Human DNA sequence from clone RP11-46B11 on chromosome 6 Contains the
             TRIP7 gene for thyroid hormone receptor interactor 7, a
             ribosomal protein S18 (RPS18) pseudogene and part of a
             novel gene, complete sequence
          Length = 152086

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 351   tggtaaatgtatgtttattt 370
             ||||||||||||||||||||
Sbjct: 62613 tggtaaatgtatgtttattt 62632
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>emb|AJ277892.2|HSA277892 Homo sapiens partial TTN gene for titin
          Length = 294540

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 360    tatgtttatttttgagagatgttt 383
              ||||||||||||||| ||||||||
Sbjct: 176586 tatgtttatttttgatagatgttt 176563
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>emb|BX957270.8| Zebrafish DNA sequence from clone DKEYP-14F10 in linkage group 4
           Contains four CpG islands, complete sequence
          Length = 143792

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 337 atttttctttattttggtaaatgt 360
           |||| |||||||||||||||||||
Sbjct: 949 atttatctttattttggtaaatgt 972
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>gb|AC104606.6| Drosophila melanogaster X BAC RP98-26L11 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 183105

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 336   catttttctttattttggta 355
             ||||||||||||||||||||
Sbjct: 97374 catttttctttattttggta 97393
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>gb|AE011190.1| Bacillus anthracis str. A2012 plasmid pXO1, complete sequence
          Length = 181677

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 339   ttttctttattttggtaaat 358
             ||||||||||||||||||||
Sbjct: 24508 ttttctttattttggtaaat 24489
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>gb|AC100848.2| Homo sapiens chromosome 18, clone RP11-909B2, complete sequence
          Length = 209251

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 364   tttatttttgagagatgttt 383
             ||||||||||||||||||||
Sbjct: 97369 tttatttttgagagatgttt 97350
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>gb|AC114316.2| Homo sapiens chromosome 5 clone RP11-348J24, complete sequence
          Length = 187136

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 339    ttttctttattttggtaaat 358
              ||||||||||||||||||||
Sbjct: 179460 ttttctttattttggtaaat 179479
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>gb|AC104336.2| Homo sapiens chromosome 1 clone RP4-783C10, complete sequence
          Length = 134161

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 193   aacctaggggcaagggatgggaca 216
             |||| |||||||||||||||||||
Sbjct: 46257 aaccgaggggcaagggatgggaca 46280
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>gb|AC108153.4| Homo sapiens BAC clone RP11-512B3 from 4, complete sequence
          Length = 45692

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 349   tttggtaaatgtatgtttattttt 372
             |||||||| |||||||||||||||
Sbjct: 17178 tttggtaagtgtatgtttattttt 17155
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>gb|AC116332.2| Homo sapiens chromosome 5 clone CTD-2086E12, complete sequence
          Length = 70453

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 339   ttttctttattttggtaaat 358
             ||||||||||||||||||||
Sbjct: 18444 ttttctttattttggtaaat 18425
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>gb|AC161011.8| Pan troglodytes BAC clone CH251-506K1 from chromosome unknown, complete
             sequence
          Length = 173070

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 349   tttggtaaatgtatgtttattttt 372
             |||||||| |||||||||||||||
Sbjct: 23382 tttggtaagtgtatgtttattttt 23405
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>gb|AC158760.4| Mus musculus chromosome 5, clone RP23-319E24, complete sequence
          Length = 191682

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 347   attttggtaaatgtatgttt 366
             ||||||||||||||||||||
Sbjct: 21895 attttggtaaatgtatgttt 21914
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>gb|AC163735.5| Pan troglodytes BAC clone CH251-576O12 from chromosome unknown, complete
              sequence
          Length = 214676

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 561    agggccatttctgccacctt 580
              ||||||||||||||||||||
Sbjct: 193394 agggccatttctgccacctt 193413
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>gb|AC161625.5| Pan troglodytes BAC clone CH251-98N20 from chromosome unknown, complete
             sequence
          Length = 179977

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 561   agggccatttctgccacctt 580
             ||||||||||||||||||||
Sbjct: 96519 agggccatttctgccacctt 96500
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>gb|AC009158.7| Homo sapiens chromosome 16 clone RP11-67I10, complete sequence
          Length = 161248

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 561    agggccatttctgccacctt 580
              ||||||||||||||||||||
Sbjct: 150505 agggccatttctgccacctt 150486
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>gb|AC010680.10| Homo sapiens BAC clone RP11-171I2 from 2, complete sequence
          Length = 177476

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 360   tatgtttatttttgagagatgttt 383
             ||||||||||||||| ||||||||
Sbjct: 77844 tatgtttatttttgatagatgttt 77867
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>gb|AC174869.2| Pan troglodytes BAC clone CH251-558A1 from chromosome unknown, complete
              sequence
          Length = 197281

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 349    tttggtaaatgtatgtttattttt 372
              |||||||| |||||||||||||||
Sbjct: 149458 tttggtaagtgtatgtttattttt 149481
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>emb|CR936411.5| Zebrafish DNA sequence from clone CH211-265O23 in linkage group 4,
             complete sequence
          Length = 93780

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 337   atttttctttattttggtaaatgt 360
             |||| |||||||||||||||||||
Sbjct: 17767 atttatctttattttggtaaatgt 17744
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>emb|BX784401.3| Zebrafish DNA sequence from clone CH211-244B2 in linkage group 4,
             complete sequence
          Length = 57313

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 337   atttttctttattttggtaaatgt 360
             |||| |||||||||||||||||||
Sbjct: 56262 atttatctttattttggtaaatgt 56285
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>emb|AL929220.13| Zebrafish DNA sequence from clone DKEY-65B13 in linkage group 20,
              complete sequence
          Length = 227539

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    tggtaaatgtatgtttattt 370
              ||||||||||||||||||||
Sbjct: 160906 tggtaaatgtatgtttattt 160925
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>gb|AE003441.3| Drosophila melanogaster chromosome X, section 25 of 74 of the complete
              sequence
          Length = 285949

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 336    catttttctttattttggta 355
              ||||||||||||||||||||
Sbjct: 194474 catttttctttattttggta 194455
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>gb|AC111107.18| Mus musculus chromosome 5, clone RP23-195P3, complete sequence
          Length = 203785

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 347    attttggtaaatgtatgttt 366
              ||||||||||||||||||||
Sbjct: 102286 attttggtaaatgtatgttt 102267
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>dbj|AP002962.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-652L8, complete
             sequence
          Length = 160222

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 364   tttatttttgagagatgttt 383
             ||||||||||||||||||||
Sbjct: 76093 tttatttttgagagatgttt 76074
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>emb|AL390860.10| Human DNA sequence from clone RP11-656O22 on chromosome 1 Contains the
             5' end of a novel gene, a novel gene, an olfactory
             receptor pseudogene, the OR13G1 gene for olfactory
             receptor, family 13, subfamily G, member 1 and two CpG
             islands, complete sequence
          Length = 72354

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 339   ttttctttattttggtaaatgtat 362
             |||||| |||||||||||||||||
Sbjct: 15964 ttttctgtattttggtaaatgtat 15987
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>gb|AC122892.4| Mus musculus BAC clone RP23-66P19 from 8, complete sequence
          Length = 216389

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 338    tttttctttattttggtaaa 357
              ||||||||||||||||||||
Sbjct: 101660 tttttctttattttggtaaa 101679
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>emb|AL161713.4|CNS01RHE Human chromosome 14 DNA sequence BAC R-22K10 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 157383

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 347    attttggtaaatgtatgttt 366
              ||||||||||||||||||||
Sbjct: 144985 attttggtaaatgtatgttt 145004


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,989,711
Number of Sequences: 3902068
Number of extensions: 5989711
Number of successful extensions: 139185
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 138845
Number of HSP's gapped (non-prelim): 340
length of query: 638
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 615
effective length of database: 17,143,297,704
effective search space: 10543128087960
effective search space used: 10543128087960
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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