ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags16e05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467801.1| Oryza sativa (japonica cultivar-group), mRNA 155 2e-34
2gb|AY112377.1| Zea mays CL24781_1 mRNA sequence 147 5e-32
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 133 7e-28
4dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic D... 133 7e-28
5gb|AF479052.1| Triticum aestivum p60 katanin mRNA, partial cds 115 2e-22
6dbj|AK058549.1| Oryza sativa (japonica cultivar-group) cDNA clon... 78 4e-11
7dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
8dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
9ref|NM_103899.3| Arabidopsis thaliana ATP binding / ATPase/ nucl... 58 4e-05
10ref|NM_112864.3| Arabidopsis thaliana ATP binding / ATPase/ nucl... 56 1e-04
11gb|BT014736.1| Arabidopsis thaliana At3g19740.1 mRNA sequence 56 1e-04
12gb|BT019198.1| Zea mays clone Contig871.F mRNA sequence 48 0.034
13gb|AY112404.1| Zea mays CL69005_1 mRNA sequence 48 0.034
14ref|NM_112791.3| Arabidopsis thaliana ATP binding / microtubule ... 44 0.53
15gb|AC093832.2| Homo sapiens BAC clone RP11-402L11 from 4, comple... 44 0.53
16gb|DQ399530.1| Arabidopsis thaliana kinesin POK2 mRNA, complete cds 44 0.53
17dbj|AP000735.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 44 0.53
18dbj|AK063910.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.53
19emb|CR450834.5| Zebrafish DNA sequence from clone CH211-237B9 in... 44 0.53
20gb|AC135427.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.1
21gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome 42 2.1
22emb|AL512303.10| Human DNA sequence from clone RP1-249I4 on chro... 42 2.1
23emb|AL606479.16| Mouse DNA sequence from clone RP23-10G21 on chr... 42 2.1
24dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
25gb|AC015445.3|F2J10 Sequence of BAC F2J10 from Arabidopsis thali... 42 2.1
26emb|CR792426.18| Zebrafish DNA sequence from clone DKEY-23A11 in... 42 2.1
27gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome 40 8.3
28gb|DP000017.1| Sus scrofa target 1 genomic scaffold 40 8.3
29gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome 40 8.3
30gb|BC070876.1| Rattus norvegicus CDP-diacylglycerol--inositol 3-... 40 8.3
31gb|AC157805.3| Mus musculus chromosome 1, clone RP24-324B17, com... 40 8.3
32gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.3
33gb|AF039040.1| Caenorhabditis elegans cosmid T22B11, complete se... 40 8.3
34gb|AC104103.5| Mus musculus BAC clone RP24-378I6 from chromosome... 40 8.3
35gb|AC068594.15| Homo sapiens chromosome 17, clone RP11-285E9, co... 40 8.3
36gb|AF016672.3| Caenorhabditis elegans cosmid F56D12, complete se... 40 8.3
37gb|U80841.2| Caenorhabditis elegans cosmid C13A10, complete sequ... 40 8.3
38emb|AL449264.18| Human DNA sequence from clone RP11-485H8 on chr... 40 8.3
39ref|NM_001030862.1| Gallus gallus cell-cycle related and express... 40 8.3
40gb|DQ372940.1| Gallus gallus cell-cycle related and expression-e... 40 8.3
41emb|AJ851386.1| Gallus gallus mRNA for hypothetical protein, clo... 40 8.3
42emb|BX530409.7| Zebrafish DNA sequence from clone DKEY-69K9 in l... 40 8.3
43gb|AC022868.10| Homo sapiens chromosome 8, clone RP11-367E12, co... 40 8.3
44gb|AC114688.3| Homo sapiens chromosome 18, clone RP11-316J22, co... 40 8.3
45gb|AC093421.2| Homo sapiens chromosome 1 clone RP11-337M6, compl... 40 8.3
46gb|AC016098.8| Homo sapiens, clone RP11-25P13, complete sequence 40 8.3
47gb|AC158442.3| Sus scrofa clone RP44-406A19, complete sequence 40 8.3
48gb|BC102187.1| Bos taurus similar to CDP-diacylglycerol--inosito... 40 8.3
49gb|AC158611.7| Mus musculus 10 BAC RP23-29D19 (Roswell Park Canc... 40 8.3
50dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
51ref|NM_138899.2| Rattus norvegicus CDP-diacylglycerol--inositol ... 40 8.3
52gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.3
53gb|AC101699.9| Mus musculus chromosome 1, clone RP23-244H18, com... 40 8.3
54dbj|AP002791.3| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 8.3
55gb|AC005899.1|AC005899 Homo sapiens chromosome 17, clone hRPK.2... 40 8.3
56dbj|AB022890.1| Rattus norvegicus PIS1 gene for phosphatidylinos... 40 8.3
57gb|AC134555.4| Mus musculus BAC clone RP24-320K4 from 17, comple... 40 8.3
58gb|AC146599.3| Mus musculus BAC clone RP24-128L9 from 6, complet... 40 8.3
59ref|NM_001034482.1| Bos taurus similar to CDP-diacylglycerol--in... 40 8.3
60dbj|D82928.1| Rat mRNA for phosphatidylinositol synthase, comple... 40 8.3
61gb|AC164630.6| Mus musculus 10 BAC RP23-153M4 (Roswell Park Canc... 40 8.3 
>ref|XM_467801.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1422

 Score =  155 bits (78), Expect = 2e-34
 Identities = 138/158 (87%)
 Strand = Plus / Minus

                                                                        
Query: 307  tcagttgccgaacccaaacggcgattttgtcctgctgccatcttccccatactgttcgtt 366
            |||||||||||||||||| || ||| | |||||||||||| |||| ||||||||||||||
Sbjct: 1422 tcagttgccgaacccaaaaggtgatctcgtcctgctgccaccttcaccatactgttcgtt 1363

                                                                        
Query: 367  ccatttccttaactcgttcatacttgtcgcgttataagaaacagacgggcttaccttggc 426
            |||||| ||||| |||||||| || ||||| | ||| |||||||||||||||||||||||
Sbjct: 1362 ccattttcttaattcgttcatgctcgtcgcatcatacgaaacagacgggcttaccttggc 1303

                                                  
Query: 427  ttttgcctgtataaaatcatccaatacaaggggtctta 464
            |||||| || || |||||||| | |  |||||||||||
Sbjct: 1302 ttttgcttgaatgaaatcatcaagtctaaggggtctta 1265



 Score =  149 bits (75), Expect = 1e-32
 Identities = 102/111 (91%)
 Strand = Plus / Minus

                                                                        
Query: 490  tcccttcttttcttcttctagaagttcctgaactggcctgtatgctgaagctatgcatag 549
            |||||||||||||||||||| |||||| ||||||||||| |||||||||||||| |||||
Sbjct: 1239 tcccttcttttcttcttctaaaagttcatgaactggcctatatgctgaagctatacatag 1180

                                                               
Query: 550  gttcttcagatcacttcctgaataaccttctgtcgcattagcaagttcatc 600
            |||||||| ||||||||||||||||||||| || | ||| |||||||||||
Sbjct: 1179 gttcttcaaatcacttcctgaataaccttcagtggaattggcaagttcatc 1129
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>gb|AY112377.1| Zea mays CL24781_1 mRNA sequence
          Length = 720

 Score =  147 bits (74), Expect = 5e-32
 Identities = 128/146 (87%)
 Strand = Plus / Plus

                                                                       
Query: 305 tgtcagttgccgaacccaaacggcgattttgtcctgctgccatcttccccatactgttcg 364
           ||||||||||| |||||||| || ||||| |||||||||||| ||||||||||||| |||
Sbjct: 443 tgtcagttgccaaacccaaatggtgatttagtcctgctgccaccttccccatactgctcg 502

                                                                       
Query: 365 ttccatttccttaactcgttcatacttgtcgcgttataagaaacagacgggcttaccttg 424
           |||||||| || || || ||||||||||| || | |||||||||||||| ||| ||||| 
Sbjct: 503 ttccattttctcaattcattcatacttgttgcatcataagaaacagacgagctaacctta 562

                                     
Query: 425 gcttttgcctgtataaaatcatccaa 450
           |||||||| || ||||||||||||||
Sbjct: 563 gcttttgcttggataaaatcatccaa 588



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 60/71 (84%)
 Strand = Plus / Plus

                                                                       
Query: 512 agttcctgaactggcctgtatgctgaagctatgcataggttcttcagatcacttcctgaa 571
           ||||| || |||||||| ||||||| |||||  ||||||||||| || || || ||||||
Sbjct: 650 agttcatggactggcctatatgctgcagctacacataggttctttaggtcgctccctgaa 709

                      
Query: 572 taaccttctgt 582
           || ||||||||
Sbjct: 710 tagccttctgt 720
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  133 bits (67), Expect = 7e-28
 Identities = 106/119 (89%)
 Strand = Plus / Minus

                                                                            
Query: 304      atgtcagttgccgaacccaaacggcgattttgtcctgctgccatcttccccatactgttc 363
                ||||||||||||||||||||| || ||| | |||||||||||| |||| |||||||||||
Sbjct: 31501252 atgtcagttgccgaacccaaaaggtgatctcgtcctgctgccaccttcaccatactgttc 31501193

                                                                           
Query: 364      gttccatttccttaactcgttcatacttgtcgcgttataagaaacagacgggcttacct 422
                ||||||||| ||||| |||||||| || ||||| | ||| |||||||||||||||||||
Sbjct: 31501192 gttccattttcttaattcgttcatgctcgtcgcatcatacgaaacagacgggcttacct 31501134



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 63/68 (92%)
 Strand = Plus / Minus

                                                                            
Query: 492      ccttcttttcttcttctagaagttcctgaactggcctgtatgctgaagctatgcataggt 551
                |||||||||||||||||| |||||| ||||||||||| |||||||||||||| |||||||
Sbjct: 31500901 ccttcttttcttcttctaaaagttcatgaactggcctatatgctgaagctatacataggt 31500842

                        
Query: 552      tcttcaga 559
                ||| ||||
Sbjct: 31500841 tctgcaga 31500834



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                                
Query: 553      cttcagatcacttcctgaataaccttctgtcgcattagcaagttcatc 600
                ||||| ||||||||||||||||||||| || | ||| |||||||||||
Sbjct: 31500730 cttcaaatcacttcctgaataaccttcagtggaattggcaagttcatc 31500683
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>dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0078N11
          Length = 155168

 Score =  133 bits (67), Expect = 7e-28
 Identities = 106/119 (89%)
 Strand = Plus / Minus

                                                                          
Query: 304    atgtcagttgccgaacccaaacggcgattttgtcctgctgccatcttccccatactgttc 363
              ||||||||||||||||||||| || ||| | |||||||||||| |||| |||||||||||
Sbjct: 136649 atgtcagttgccgaacccaaaaggtgatctcgtcctgctgccaccttcaccatactgttc 136590

                                                                         
Query: 364    gttccatttccttaactcgttcatacttgtcgcgttataagaaacagacgggcttacct 422
              ||||||||| ||||| |||||||| || ||||| | ||| |||||||||||||||||||
Sbjct: 136589 gttccattttcttaattcgttcatgctcgtcgcatcatacgaaacagacgggcttacct 136531



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 63/68 (92%)
 Strand = Plus / Minus

                                                                          
Query: 492    ccttcttttcttcttctagaagttcctgaactggcctgtatgctgaagctatgcataggt 551
              |||||||||||||||||| |||||| ||||||||||| |||||||||||||| |||||||
Sbjct: 136298 ccttcttttcttcttctaaaagttcatgaactggcctatatgctgaagctatacataggt 136239

                      
Query: 552    tcttcaga 559
              ||| ||||
Sbjct: 136238 tctgcaga 136231



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                              
Query: 553    cttcagatcacttcctgaataaccttctgtcgcattagcaagttcatc 600
              ||||| ||||||||||||||||||||| || | ||| |||||||||||
Sbjct: 136127 cttcaaatcacttcctgaataaccttcagtggaattggcaagttcatc 136080
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>gb|AF479052.1| Triticum aestivum p60 katanin mRNA, partial cds
          Length = 405

 Score =  115 bits (58), Expect = 2e-22
 Identities = 100/114 (87%)
 Strand = Plus / Minus

                                                                       
Query: 491 cccttcttttcttcttctagaagttcctgaactggcctgtatgctgaagctatgcatagg 550
           |||||||||||||||||||| ||||| ||||||||||||||||||| ||||| |||||||
Sbjct: 221 cccttcttttcttcttctagcagttcatgaactggcctgtatgctgcagctacgcatagg 162

                                                                 
Query: 551 ttcttcagatcacttcctgaataaccttctgtcgcattagcaagttcatcgaat 604
           |||||||  ||||| || || ||||||||||| ||||  || ||||| ||||||
Sbjct: 161 ttcttcaagtcactcccagagtaaccttctgttgcatcggctagttcgtcgaat 108



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 113/139 (81%)
 Strand = Plus / Minus

                                                                       
Query: 312 tgccgaacccaaacggcgattttgtcctgctgccatcttccccatactgttcgttccatt 371
           |||||||||| || ||||||||  ||||||||||  |||| || ||||| ||||||||||
Sbjct: 400 tgccgaacccgaatggcgatttgctcctgctgccgccttctccgtactgctcgttccatt 341

                                                                       
Query: 372 tccttaactcgttcatacttgtcgcgttataagaaacagacgggcttaccttggcttttg 431
           | |||| ||||||||| ||||| || |   | | |||||| ||||| ||||||||||| |
Sbjct: 340 ttcttagctcgttcatgcttgtggcatcgaaggcaacagatgggctcaccttggctttcg 281

                              
Query: 432 cctgtataaaatcatccaa 450
           | || | ||| ||||||||
Sbjct: 280 cttggacaaagtcatccaa 262
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>dbj|AK058549.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-C07, full
            insert sequence
          Length = 1466

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 114/139 (82%)
 Strand = Plus / Minus

                                                                        
Query: 312  tgccgaacccaaacggcgattttgtcctgctgccatcttccccatactgttcgttccatt 371
            ||||||||||||| || |||||  ||||||| ||| ||||||| ||||| ||||||||||
Sbjct: 1100 tgccgaacccaaatggtgatttactcctgcttccaccttccccgtactgctcgttccatt 1041

                                                                        
Query: 372  tccttaactcgttcatacttgtcgcgttataagaaacagacgggcttaccttggcttttg 431
            | | |||||||||||| || || |||| | |||  || || || |||||||| |||||||
Sbjct: 1040 ttcgtaactcgttcatgctcgtggcgtcaaaagcgacggatggacttacctttgcttttg 981

                               
Query: 432  cctgtataaaatcatccaa 450
            | || | |||||| |||||
Sbjct: 980  cttgcacaaaatcctccaa 962



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 54/62 (87%)
 Strand = Plus / Minus

                                                                       
Query: 496 cttttcttcttctagaagttcctgaactggcctgtatgctgaagctatgcataggttctt 555
           |||||||||||||||||| || |||||||| ||||| || |  || ||||||||||||||
Sbjct: 919 cttttcttcttctagaagctcatgaactggtctgtacgcagctgcgatgcataggttctt 860

             
Query: 556 ca 557
           ||
Sbjct: 859 ca 858
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Plus

                                                                           
Query: 312     tgccgaacccaaacggcgattttgtcctgctgccatcttccccatactgttcgttccatt 371
               ||||||||||||| || |||||  ||||||| ||| ||||||| ||||| ||||||||||
Sbjct: 6514926 tgccgaacccaaatggtgatttactcctgcttccaccttccccgtactgctcgttccatt 6514985

                               
Query: 372     tccttaactcgttcat 387
               | | ||||||||||||
Sbjct: 6514986 ttcgtaactcgttcat 6515001



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                           
Query: 496     cttttcttcttctagaagttcctgaactggcctgtatgctgaagctatgcataggttctt 555
               |||||||||||||||||| || |||||||| ||||| || |  || ||||||||||||| 
Sbjct: 6515344 cttttcttcttctagaagctcatgaactggtctgtacgcagctgcgatgcataggttctg 6515403

                   
Query: 556     caga 559
               ||||
Sbjct: 6515404 caga 6515407
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>dbj|AP003513.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0690H04
          Length = 137319

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Plus

                                                                         
Query: 312   tgccgaacccaaacggcgattttgtcctgctgccatcttccccatactgttcgttccatt 371
             ||||||||||||| || |||||  ||||||| ||| ||||||| ||||| ||||||||||
Sbjct: 31302 tgccgaacccaaatggtgatttactcctgcttccaccttccccgtactgctcgttccatt 31361

                             
Query: 372   tccttaactcgttcat 387
             | | ||||||||||||
Sbjct: 31362 ttcgtaactcgttcat 31377



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                         
Query: 496   cttttcttcttctagaagttcctgaactggcctgtatgctgaagctatgcataggttctt 555
             |||||||||||||||||| || |||||||| ||||| || |  || ||||||||||||| 
Sbjct: 31720 cttttcttcttctagaagctcatgaactggtctgtacgcagctgcgatgcataggttctg 31779

                 
Query: 556   caga 559
             ||||
Sbjct: 31780 caga 31783
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>ref|NM_103899.3| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/
            nucleotide binding AT1G50140 mRNA, complete cds
          Length = 2063

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                        
Query: 499  ttcttcttctagaagttcctgaactggcctgtatgctgaagctatgcataggttcttcag 558
            |||||||| ||  ||||| ||||| |||||||| || | ||| |||||||| ||||||||
Sbjct: 1737 ttcttcttgtaacagttcttgaacaggcctgtacgcagcagcaatgcatagattcttcag 1678

                                 
Query: 559  atcacttcctgaataaccttc 579
            ||| || || |||||||||||
Sbjct: 1677 atcgctaccggaataaccttc 1657



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 332  tttgtcctgctgccatcttccccatactgttcgttccattt 372
            ||||||||||||||  |||| ||||| || |||||||||||
Sbjct: 1904 tttgtcctgctgcctccttcaccatattgctcgttccattt 1864
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>ref|NM_112864.3| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/
            nucleotide binding AT3G19740 mRNA, complete cds
          Length = 1406

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 73/88 (82%)
 Strand = Plus / Minus

                                                                        
Query: 492  ccttcttttcttcttctagaagttcctgaactggcctgtatgctgaagctatgcataggt 551
            |||| |||||||||| ||  | ||| ||||| || |||||||| |  ||||||||||| |
Sbjct: 1120 ccttgttttcttcttgtaacaattcttgaacaggtctgtatgcagctgctatgcatagat 1061

                                        
Query: 552  tcttcagatcacttcctgaataaccttc 579
            |||| ||||| ||||||||||| |||||
Sbjct: 1060 tctttagatcgcttcctgaatatccttc 1033
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>gb|BT014736.1| Arabidopsis thaliana At3g19740.1 mRNA sequence
          Length = 1299

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 73/88 (82%)
 Strand = Plus / Minus

                                                                        
Query: 492  ccttcttttcttcttctagaagttcctgaactggcctgtatgctgaagctatgcataggt 551
            |||| |||||||||| ||  | ||| ||||| || |||||||| |  ||||||||||| |
Sbjct: 1120 ccttgttttcttcttgtaacaattcttgaacaggtctgtatgcagctgctatgcatagat 1061

                                        
Query: 552  tcttcagatcacttcctgaataaccttc 579
            |||| ||||| ||||||||||| |||||
Sbjct: 1060 tctttagatcgcttcctgaatatccttc 1033
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>gb|BT019198.1| Zea mays clone Contig871.F mRNA sequence
          Length = 1247

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                               
Query: 548 aggttcttcagatcacttcctgaataaccttctgtc 583
           ||||||||||||||||| |||||||| || ||||||
Sbjct: 783 aggttcttcagatcactgcctgaatacccatctgtc 748
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>gb|AY112404.1| Zea mays CL69005_1 mRNA sequence
          Length = 631

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 548 aggttcttcagatcacttcctgaataaccttctgtc 583
           ||||||||||||||||| |||||||| || ||||||
Sbjct: 535 aggttcttcagatcactgcctgaatacccatctgtc 570
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>ref|NM_112791.3| Arabidopsis thaliana ATP binding / microtubule motor AT3G19050 mRNA,
            complete cds
          Length = 8169

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 494  ttcttttcttcttctagaagtt 515
            ||||||||||||||||||||||
Sbjct: 3911 ttcttttcttcttctagaagtt 3890
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>gb|AC093832.2| Homo sapiens BAC clone RP11-402L11 from 4, complete sequence
          Length = 187232

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 135   ctggcaaaacttggaactttgt 156
             ||||||||||||||||||||||
Sbjct: 27543 ctggcaaaacttggaactttgt 27564
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>gb|DQ399530.1| Arabidopsis thaliana kinesin POK2 mRNA, complete cds
          Length = 8398

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 494  ttcttttcttcttctagaagtt 515
            ||||||||||||||||||||||
Sbjct: 3926 ttcttttcttcttctagaagtt 3905
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>dbj|AP000735.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K13E13
          Length = 79186

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 494   ttcttttcttcttctagaagtt 515
             ||||||||||||||||||||||
Sbjct: 62750 ttcttttcttcttctagaagtt 62729
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>dbj|AK063910.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-A05, full
           insert sequence
          Length = 1227

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 544 gcataggttcttcagatcacttcctgaata 573
           |||||| |||||||| ||||||||||||||
Sbjct: 458 gcatagattcttcaggtcacttcctgaata 429
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>emb|CR450834.5| Zebrafish DNA sequence from clone CH211-237B9 in linkage group 11,
             complete sequence
          Length = 137302

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 422   ttggcttttgcctgtataaaat 443
             ||||||||||||||||||||||
Sbjct: 16495 ttggcttttgcctgtataaaat 16516
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>gb|AC135427.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617H07,
             complete sequence
          Length = 114135

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 7     tgccattacaacaactgaaac 27
             |||||||||||||||||||||
Sbjct: 45693 tgccattacaacaactgaaac 45713
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>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome
          Length = 3059876

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 116   tcgccggtaataccagctact 136
             |||||||||||||||||||||
Sbjct: 55449 tcgccggtaataccagctact 55429
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>emb|AL512303.10| Human DNA sequence from clone RP1-249I4 on chromosome 6 Contains the
             KIAA0441 gene and a putative novel gene, complete sequence
          Length = 106408

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 81    gtagctcagcattacattgtc 101
             |||||||||||||||||||||
Sbjct: 41276 gtagctcagcattacattgtc 41296
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>emb|AL606479.16| Mouse DNA sequence from clone RP23-10G21 on chromosome 11 Contains the
             Scgb3a1 gene for family 3A member 1 secretoglobin, gene
             A230103N10Rik, a ribosomal protein L30 (Rpl30) pseudogene,
             a ribosomal protein S10 (Rps10) pseudogene, a ribosomal
             protein L29 (Rpl29) pseudogene, the Gfpt2 gene for
             glutamine fructose-6-phosphate transaminase 2, the Mapk9
             gene for mitogen activated protein kinase 9, the 5' end of
             gene 9130006A14Rik and four CpG islands, complete sequence
          Length = 254981

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 494   ttcttttcttcttctagaagt 514
             |||||||||||||||||||||
Sbjct: 96842 ttcttttcttcttctagaagt 96822
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 7       tgccattacaacaactgaaac 27
               |||||||||||||||||||||
Sbjct: 5838929 tgccattacaacaactgaaac 5838949
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>gb|AC015445.3|F2J10 Sequence of BAC F2J10 from Arabidopsis thaliana chromosome 1,
            complete sequence
          Length = 91720

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 332  tttgtcctgctgccatcttccccatactgttcgttccattt 372
            ||||||||||||||  |||| ||||| || |||||||||||
Sbjct: 6140 tttgtcctgctgcctccttcaccatattgctcgttccattt 6100
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>emb|CR792426.18| Zebrafish DNA sequence from clone DKEY-23A11 in linkage group 3,
             complete sequence
          Length = 210874

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 493   cttcttttcttcttctagaagttcc 517
             ||||||||||||||| |||||||||
Sbjct: 84067 cttcttttcttcttccagaagttcc 84091
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>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome
          Length = 4222334

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 437    ataaaatcatccaatacaag 456
              ||||||||||||||||||||
Sbjct: 602063 ataaaatcatccaatacaag 602082
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>gb|DP000017.1| Sus scrofa target 1 genomic scaffold
          Length = 1471440

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 166    tgatattttgctatttgtac 185
              ||||||||||||||||||||
Sbjct: 105002 tgatattttgctatttgtac 104983
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>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome
          Length = 4222645

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 437    ataaaatcatccaatacaag 456
              ||||||||||||||||||||
Sbjct: 601853 ataaaatcatccaatacaag 601872
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>gb|BC070876.1| Rattus norvegicus CDP-diacylglycerol--inositol
           3-phosphatidyltransferase (phosphatidylinositol
           synthase), mRNA (cDNA clone MGC:91485 IMAGE:7096385),
           complete cds
          Length = 1890

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 53  caggctcatgctgagctgga 72
           ||||||||||||||||||||
Sbjct: 694 caggctcatgctgagctgga 675
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>gb|AC157805.3| Mus musculus chromosome 1, clone RP24-324B17, complete sequence
          Length = 212185

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 489   gtcccttcttttcttcttct 508
             ||||||||||||||||||||
Sbjct: 43234 gtcccttcttttcttcttct 43253
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 490     tcccttcttttcttcttcta 509
               ||||||||||||||||||||
Sbjct: 4110416 tcccttcttttcttcttcta 4110435
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>gb|AF039040.1| Caenorhabditis elegans cosmid T22B11, complete sequence
          Length = 35564

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 490  tcccttcttttcttcttcta 509
            ||||||||||||||||||||
Sbjct: 2774 tcccttcttttcttcttcta 2793
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>gb|AC104103.5| Mus musculus BAC clone RP24-378I6 from chromosome 17, complete sequence
          Length = 137278

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 489    gtcccttcttttcttcttct 508
              ||||||||||||||||||||
Sbjct: 127332 gtcccttcttttcttcttct 127313
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>gb|AC068594.15| Homo sapiens chromosome 17, clone RP11-285E9, complete sequence
          Length = 168501

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 196   aggctgtataaataggctct 215
             ||||||||||||||||||||
Sbjct: 27046 aggctgtataaataggctct 27065
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>gb|AF016672.3| Caenorhabditis elegans cosmid F56D12, complete sequence
          Length = 44036

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    tggagcaaatttgtagctca 88
             ||||||||||||||||||||
Sbjct: 42136 tggagcaaatttgtagctca 42117
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>gb|U80841.2| Caenorhabditis elegans cosmid C13A10, complete sequence
          Length = 14687

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 69   tggagcaaatttgtagctca 88
            ||||||||||||||||||||
Sbjct: 2000 tggagcaaatttgtagctca 1981
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>emb|AL449264.18| Human DNA sequence from clone RP11-485H8 on chromosome 1 Contains the
             5' end of the CASQ2 gene for calsequestrin 2 (cardiac
             muscle), the NHLH2 gene for nescient helix loop helix 2, a
             heterogeneous nuclear ribonucleoprotein A1 (HNRPA1)
             pseudogene and two CpG islands, complete sequence
          Length = 164655

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 490   tcccttcttttcttcttcta 509
             ||||||||||||||||||||
Sbjct: 69985 tcccttcttttcttcttcta 69966
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>ref|NM_001030862.1| Gallus gallus cell-cycle related and expression-elevated protein in
           tumor (CREPT), mRNA
          Length = 3428

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 13  tacaacaactgaaactttct 32
           ||||||||||||||||||||
Sbjct: 471 tacaacaactgaaactttct 490
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>gb|DQ372940.1| Gallus gallus cell-cycle related and expression-elevated protein in
           tumor (CREPT) mRNA, complete cds
          Length = 1148

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 13  tacaacaactgaaactttct 32
           ||||||||||||||||||||
Sbjct: 448 tacaacaactgaaactttct 467
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>emb|AJ851386.1| Gallus gallus mRNA for hypothetical protein, clone 1d17
          Length = 3428

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 13  tacaacaactgaaactttct 32
           ||||||||||||||||||||
Sbjct: 471 tacaacaactgaaactttct 490
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>emb|BX530409.7| Zebrafish DNA sequence from clone DKEY-69K9 in linkage group 15, complete
              sequence
          Length = 245494

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 494    ttcttttcttcttctagaag 513
              ||||||||||||||||||||
Sbjct: 126682 ttcttttcttcttctagaag 126663
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>gb|AC022868.10| Homo sapiens chromosome 8, clone RP11-367E12, complete sequence
          Length = 166018

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     tttgtagctcagcattacat 97
              ||||||||||||||||||||
Sbjct: 111745 tttgtagctcagcattacat 111764
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>gb|AC114688.3| Homo sapiens chromosome 18, clone RP11-316J22, complete sequence
          Length = 166525

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 260   tattgattttacaaacaaca 279
             ||||||||||||||||||||
Sbjct: 70050 tattgattttacaaacaaca 70069
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>gb|AC093421.2| Homo sapiens chromosome 1 clone RP11-337M6, complete sequence
          Length = 183974

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 494    ttcttttcttcttctagaag 513
              ||||||||||||||||||||
Sbjct: 133738 ttcttttcttcttctagaag 133757
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>gb|AC016098.8| Homo sapiens, clone RP11-25P13, complete sequence
          Length = 156275

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 260    tattgattttacaaacaaca 279
              ||||||||||||||||||||
Sbjct: 101558 tattgattttacaaacaaca 101539
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>gb|AC158442.3| Sus scrofa clone RP44-406A19, complete sequence
          Length = 173956

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 166    tgatattttgctatttgtac 185
              ||||||||||||||||||||
Sbjct: 105002 tgatattttgctatttgtac 104983
to top
>gb|BC102187.1| Bos taurus similar to CDP-diacylglycerol--inositol
           3-phosphatidyltransferase (phosphatidylinositol
           synthase), mRNA (cDNA clone MGC:127038 IMAGE:7941929),
           complete cds
          Length = 1587

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 53  caggctcatgctgagctgga 72
           ||||||||||||||||||||
Sbjct: 650 caggctcatgctgagctgga 631
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>gb|AC158611.7| Mus musculus 10 BAC RP23-29D19 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 214923

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 421   cttggcttttgcctgtataa 440
             ||||||||||||||||||||
Sbjct: 69350 cttggcttttgcctgtataa 69369
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 490     tcccttcttttcttcttcta 509
               ||||||||||||||||||||
Sbjct: 4110525 tcccttcttttcttcttcta 4110544
to top
>ref|NM_138899.2| Rattus norvegicus CDP-diacylglycerol--inositol
           3-phosphatidyltransferase (phosphatidylinositol
           synthase) (Cdipt), mRNA
          Length = 1890

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 53  caggctcatgctgagctgga 72
           ||||||||||||||||||||
Sbjct: 694 caggctcatgctgagctgga 675
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>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0050H14, complete sequence
          Length = 142245

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 490   tcccttcttttcttcttcta 509
             ||||||||||||||||||||
Sbjct: 11053 tcccttcttttcttcttcta 11072
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>gb|AC101699.9| Mus musculus chromosome 1, clone RP23-244H18, complete sequence
          Length = 173113

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 489    gtcccttcttttcttcttct 508
              ||||||||||||||||||||
Sbjct: 160834 gtcccttcttttcttcttct 160853
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>dbj|AP002791.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-843F11, complete
             sequences
          Length = 172914

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    tgctgagctggagcaaattt 80
             ||||||||||||||||||||
Sbjct: 20505 tgctgagctggagcaaattt 20486
to top
>gb|AC005899.1|AC005899 Homo sapiens chromosome 17, clone  hRPK.227_G_15, complete sequence
          Length = 183827

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 553   cttcagatcacttcctgaataacc 576
             |||||| |||||||||||||||||
Sbjct: 34330 cttcaggtcacttcctgaataacc 34307
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>dbj|AB022890.1| Rattus norvegicus PIS1 gene for phosphatidylinositol synthase,
            complete cds
          Length = 3890

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 53   caggctcatgctgagctgga 72
            ||||||||||||||||||||
Sbjct: 1778 caggctcatgctgagctgga 1759
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>gb|AC134555.4| Mus musculus BAC clone RP24-320K4 from 17, complete sequence
          Length = 174388

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 489    gtcccttcttttcttcttct 508
              ||||||||||||||||||||
Sbjct: 152759 gtcccttcttttcttcttct 152778
to top
>gb|AC146599.3| Mus musculus BAC clone RP24-128L9 from 6, complete sequence
          Length = 169866

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 536    gaagctatgcataggttctt 555
              ||||||||||||||||||||
Sbjct: 157394 gaagctatgcataggttctt 157375
to top
>ref|NM_001034482.1| Bos taurus similar to CDP-diacylglycerol--inositol
           3-phosphatidyltransferase (phosphatidylinositol
           synthase) (MGC127038), mRNA
          Length = 1587

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 53  caggctcatgctgagctgga 72
           ||||||||||||||||||||
Sbjct: 650 caggctcatgctgagctgga 631
to top
>dbj|D82928.1| Rat mRNA for phosphatidylinositol synthase, complete cds
          Length = 1621

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 53  caggctcatgctgagctgga 72
           ||||||||||||||||||||
Sbjct: 442 caggctcatgctgagctgga 423
to top
>gb|AC164630.6| Mus musculus 10 BAC RP23-153M4 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 187031

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 421   cttggcttttgcctgtataa 440
             ||||||||||||||||||||
Sbjct: 19178 cttggcttttgcctgtataa 19159


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,285,706
Number of Sequences: 3902068
Number of extensions: 5285706
Number of successful extensions: 120113
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 119752
Number of HSP's gapped (non-prelim): 361
length of query: 610
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 587
effective length of database: 17,143,297,704
effective search space: 10063115752248
effective search space used: 10063115752248
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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