| Clone Name | rbags16e03 |
|---|---|
| Clone Library Name | barley_pub |
>GLPQ1_ARATH (Q9FJ62) Probable glycerophosphoryl diester phosphodiesterase 1| precursor (EC 3.1.4.46) Length = 766 Score = 105 bits (262), Expect = 1e-22 Identities = 62/128 (48%), Positives = 76/128 (59%), Gaps = 3/128 (2%) Frame = -3 Query: 664 LPVYVYLLMNEFLSQPYDFFSDATAQINALVHKGVEGGGVDGLITDFPGTAHRYKLNSCR 485 LPVYV + NEF+SQP+DFF+DAT +IN+ V G G++G IT+FP TA RYK NSC Sbjct: 618 LPVYVEVFRNEFVSQPWDFFADATVEINS----HVTGAGINGTITEFPLTAARYKRNSCL 673 Query: 484 KMGDKTPYYMLPPQRGGLLGVIPDKXXXXXXXXXXPVLTDSDVAEPPLPPVS---NTTGP 314 D P YM+P Q GLL ++ PV TD+DV EPPLPPVS TT P Sbjct: 674 TRKD-VPPYMIPVQPAGLLTIV-SPASLPPAEAPSPVFTDADVTEPPLPPVSARAPTTTP 731 Query: 313 APSHAASR 290 P + Sbjct: 732 GPQSTGEK 739
>GLPQ2_ARATH (Q9SZ11) Probable glycerophosphoryl diester phosphodiesterase 2| precursor (EC 3.1.4.46) Length = 759 Score = 102 bits (255), Expect = 8e-22 Identities = 62/130 (47%), Positives = 76/130 (58%) Frame = -3 Query: 664 LPVYVYLLMNEFLSQPYDFFSDATAQINALVHKGVEGGGVDGLITDFPGTAHRYKLNSCR 485 LPVYV L NEFLSQPYDFF+DAT +IN+ + G G++G IT+FP TA RYK N C Sbjct: 611 LPVYVELFQNEFLSQPYDFFADATVEINSY----ITGAGINGTITEFPFTAARYKRNLCL 666 Query: 484 KMGDKTPYYMLPPQRGGLLGVIPDKXXXXXXXXXXPVLTDSDVAEPPLPPVSNTTGPAPS 305 + P YM P Q G LL ++ PV TD+DV EPPLPPV T AP+ Sbjct: 667 GRKETIP-YMAPAQPGALLTLV-SPTAFPPAEAPNPVFTDADVTEPPLPPV---TAKAPT 721 Query: 304 HAASRIRTDA 275 + T+A Sbjct: 722 SSPGTPSTNA 731
>MOSA_MAIZE (P15268) Autonomous transposable element EN-1 mosaic protein| (Suppressor-mutator system protein) (SPM) Length = 621 Score = 35.8 bits (81), Expect = 0.12 Identities = 17/31 (54%), Positives = 22/31 (70%) Frame = +3 Query: 141 HHPQILVQPNQKEK*IARYIEQVAEKNGPQS 233 +HP+IL N EK +ARYI+ V EKNGP + Sbjct: 363 NHPEILNDSNATEK-LARYIDNVREKNGPDT 392
>CAPS1_MOUSE (Q80TJ1) Calcium-dependent secretion activator 1 (Calcium-dependent| activator protein for secretion 1) (CAPS-1) Length = 1355 Score = 32.0 bits (71), Expect = 1.7 Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 4/58 (6%) Frame = -2 Query: 497 ELVQEDGGQDALLHAASPARRPP----WGHTG*SSIATSNGPNAGVDGLGRGGAAPSS 336 E+++E+ G+D L AAS AR P G G + + S G AGV G GG+ SS Sbjct: 13 EILEEESGKDVLGSAASGARLSPSRTSEGSAGSAGMGGS-GAGAGVGAGGGGGSGASS 69
>MECT1_HUMAN (Q6UUV9) Mucoepidermoid carcinoma translocated protein 1| (Transducer of regulated cAMP response element-binding protein 1) (Transducer of CREB protein 1) Length = 634 Score = 31.2 bits (69), Expect = 2.9 Identities = 16/45 (35%), Positives = 25/45 (55%) Frame = -2 Query: 395 SNGPNAGVDGLGRGGAAPSSCEQHHRSGALPRRLQNTHGRRRDAA 261 +N + G+ G G+G + P S QH +G P L +T RR+ A+ Sbjct: 283 ANLTHLGIGGAGQGMSTPGSSPQHRPAGVSPLSL-STEARRQQAS 326
>MAF_AVIS4 (P23091) Transforming protein Maf| Length = 369 Score = 31.2 bits (69), Expect = 2.9 Identities = 23/75 (30%), Positives = 27/75 (36%) Frame = -2 Query: 536 HHRFPRDGP*IQTELVQEDGGQDALLHAASPARRPPWGHTG*SSIATSNGPNAGVDGLGR 357 HH P G GG H A+P PP S A+S+ +G G G Sbjct: 177 HHHHPHHGG---------GGGGGGHPHGAAPGSAPP-------SSASSSAAGSGGGGGGG 220 Query: 356 GGAAPSSCEQHHRSG 312 GG A HH G Sbjct: 221 GGGAGGLHHPHHGGG 235
>CAPS1_RAT (Q62717) Calcium-dependent secretion activator 1 (Calcium-dependent| activator protein for secretion 1) (CAPS-1) (rCAPS) Length = 1289 Score = 30.8 bits (68), Expect = 3.8 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Frame = -2 Query: 497 ELVQEDGGQDALLHAASPAR-RPPWGHTG*SSIATSNGPNAGVDGLGRGGAAPSSCEQHH 321 E+++E+ G++ L AAS AR P + G + A G AG G+G GG S Sbjct: 13 EILEEESGKEVLGSAASGARLSPSRTNEGSAGSAGMGGSGAGA-GVGAGGGGGSGASSGG 71 Query: 320 RSGAL 306 +G L Sbjct: 72 GAGGL 76
>CTF1_RAT (Q63086) Cardiotrophin-1 (CT-1)| Length = 203 Score = 30.4 bits (67), Expect = 5.0 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 4/32 (12%) Frame = -3 Query: 349 PPLPPVSNTTGPAPSHA----ASRIRTDAGVM 266 PP P++ +GPAPSHA + R+R DA + Sbjct: 63 PPRLPLAGLSGPAPSHAGLPVSERLRQDAAAL 94
>CTF1_MOUSE (Q60753) Cardiotrophin-1 (CT-1)| Length = 203 Score = 30.4 bits (67), Expect = 5.0 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 4/32 (12%) Frame = -3 Query: 349 PPLPPVSNTTGPAPSHA----ASRIRTDAGVM 266 PP P++ +GPAPSHA + R+R DA + Sbjct: 63 PPRLPLAGLSGPAPSHAGLPVSERLRQDAAAL 94
>MRG15_DROME (Q9Y0I1) Protein MRG15| Length = 424 Score = 30.4 bits (67), Expect = 5.0 Identities = 16/26 (61%), Positives = 17/26 (65%), Gaps = 4/26 (15%) Frame = -3 Query: 373 LTDSDVAEPPLPPVSN----TTGPAP 308 LT SDVAE PLPP + TT PAP Sbjct: 217 LTGSDVAEKPLPPTTTPSTPTTEPAP 242
>MECT1_MOUSE (Q68ED7) Mucoepidermoid carcinoma translocated protein 1 homolog| Length = 630 Score = 30.4 bits (67), Expect = 5.0 Identities = 19/49 (38%), Positives = 26/49 (53%) Frame = -2 Query: 410 SSIATSNGPNAGVDGLGRGGAAPSSCEQHHRSGALPRRLQNTHGRRRDA 264 SS +T + + GV G G+G PSS QH + P L +T RR+ A Sbjct: 274 SSSSTGSLAHLGVGGAGQGMNTPSSSPQHRPAVVSPLSL-STEARRQQA 321
>QUEA_BACHD (Q9KDI6) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC| 5.-.-.-) (Queuosine biosynthesis protein queA) Length = 347 Score = 30.4 bits (67), Expect = 5.0 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = -3 Query: 634 EFLSQPYDFFSDATAQINALVHKGVEGGGVDGLITDF 524 E + Q +D F + + + ++ G E G+DGLIT+F Sbjct: 261 ETIRQEHDEFVETSGWTSIFIYPGYEFKGIDGLITNF 297
>PO4F2_MOUSE (Q63934) POU domain, class 4, transcription factor 2| (Brain-specific homeobox/POU domain protein 3B) (Brn-3B) (Brn-3.2) Length = 411 Score = 30.0 bits (66), Expect = 6.5 Identities = 18/50 (36%), Positives = 22/50 (44%) Frame = -2 Query: 461 LHAASPARRPPWGHTG*SSIATSNGPNAGVDGLGRGGAAPSSCEQHHRSG 312 LH+ASP P + S ++SN G G G GG SS SG Sbjct: 29 LHSASPGSSAPAAPSASSPSSSSNAGGGGGGGGGGGGGGRSSSSSSSGSG 78
>IRS1_HUMAN (P35568) Insulin receptor substrate 1 (IRS-1)| Length = 1242 Score = 29.6 bits (65), Expect = 8.5 Identities = 19/49 (38%), Positives = 25/49 (51%) Frame = +3 Query: 225 PQSQISREAHSTSSITPASVRILEAAWEGAGPVVLLTGGRGGSATSESV 371 PQ R + T S TP++ R+ GAG V GG G S++SE V Sbjct: 1092 PQGCRRRHSSETFSSTPSATRVGNTVPFGAGAAV--GGGGGSSSSSEDV 1138
>CY551_CHLVI (P42426) Photosynthetic reaction center cytochrome c-551| (Cytochrome c551) Length = 206 Score = 29.6 bits (65), Expect = 8.5 Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 4/37 (10%) Frame = -3 Query: 334 VSNTTG--PAPSHAA--SRIRTDAGVMLLVLCASLLI 236 VS TG PAP+H+A + +R+ G LL+ CASL+I Sbjct: 27 VSFLTGYSPAPNHSAILTPLRSFMGWFLLIFCASLII 63 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,266,247 Number of Sequences: 219361 Number of extensions: 1973617 Number of successful extensions: 6152 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 5814 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6145 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6427774254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)