>gb|AC095996.9| Rattus norvegicus 18 BAC CH230-13K4 (Children's Hospital Oakland
            Research Institute Rat (BN/SsNHsd/MCW) BAC library)
            complete sequence
          Length = 54068

 Score = 40.1 bits (20), Expect = 0.76
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 52   cacactcataaaagaaaatg 71
            ||||||||||||||||||||
Sbjct: 4948 cacactcataaaagaaaatg 4967

>gb|AC155837.7| Mus musculus 6 BAC RP24-409L6 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 156886

 Score = 40.1 bits (20), Expect = 0.76
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 52     cacactcataaaagaaaatgaaaa 75
              |||||||||||||||||| |||||
Sbjct: 112720 cacactcataaaagaaaaagaaaa 112743

>gb|U41625.1| Caenorhabditis elegans cosmid K03A1, complete sequence
          Length = 35227

 Score = 40.1 bits (20), Expect = 0.76
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 56   ctcataaaagaaaatgaaaa 75
            ||||||||||||||||||||
Sbjct: 9205 ctcataaaagaaaatgaaaa 9224

>gb|AC154464.2| Mus musculus BAC clone RP24-146B1 from 16, complete sequence
          Length = 143858

 Score = 40.1 bits (20), Expect = 0.76
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 54     cactcataaaagaaaatgaa 73
              ||||||||||||||||||||
Sbjct: 100854 cactcataaaagaaaatgaa 100835

>gb|AC101932.9| Mus musculus chromosome 7, clone RP24-66E13, complete sequence
          Length = 214419

 Score = 40.1 bits (20), Expect = 0.76
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 50     agcacactcataaaagaaaatgaa 73
              |||||||||| |||||||||||||
Sbjct: 168206 agcacactcacaaaagaaaatgaa 168229

>emb|CT010519.5| Mouse DNA sequence from clone RP23-305D10 on chromosome 14, complete
              sequence
          Length = 224463

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 56     ctcataaaagaaaatgaaa 74
              |||||||||||||||||||
Sbjct: 222577 ctcataaaagaaaatgaaa 222559

>gb|AC121590.2| Mus musculus BAC clone RP23-281L22 from 2, complete sequence
          Length = 167364

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 50     agcacactcataaaagaaa 68
              |||||||||||||||||||
Sbjct: 119186 agcacactcataaaagaaa 119168

>emb|AL049633.3|HSJ1069O1 Human DNA sequence from clone RP5-1069O1 on chromosome 20 Contains part
             of the gene for a novel protein (LOC284776), complete
             sequence
          Length = 92357

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 57    tcataaaagaaaatgaaaa 75
             |||||||||||||||||||
Sbjct: 48282 tcataaaagaaaatgaaaa 48264

>gb|AC165284.2| Mus musculus BAC clone RP24-378E14 from chromosome 14, complete sequence
          Length = 202193

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 56     ctcataaaagaaaatgaaa 74
              |||||||||||||||||||
Sbjct: 140599 ctcataaaagaaaatgaaa 140617

>gb|AC125768.5| Rattus norvegicus X BAC CH230-211J9 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 213348

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 52    cacactcataaaagaaaat 70
             |||||||||||||||||||
Sbjct: 18740 cacactcataaaagaaaat 18722

>gb|AC073528.26|AC073528 Homo sapiens 12 BAC RP11-8P16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 167041

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 57    tcataaaagaaaatgaaaa 75
             |||||||||||||||||||
Sbjct: 87344 tcataaaagaaaatgaaaa 87362

>gb|AC084452.1|AC084452 Caenorhabditis briggsae cosmid CB024D21, complete sequence
          Length = 93590

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 51    gcacactcataaaagaaaatgaa 73
             |||||||||||||||||| ||||
Sbjct: 82114 gcacactcataaaagaaactgaa 82092

>gb|AC142561.3| Didelphis virginiana clone LB3-9F6, complete sequence
          Length = 112625

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 56    ctcataaaagaaaatgaaa 74
             |||||||||||||||||||
Sbjct: 85247 ctcataaaagaaaatgaaa 85265

>gb|AC012380.1|AC012380 Genomic Sequence For Homo sapiens Clone 125H5, Chromosome 20, complete
              sequence
          Length = 108623

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 57     tcataaaagaaaatgaaaa 75
              |||||||||||||||||||
Sbjct: 103274 tcataaaagaaaatgaaaa 103292

>gb|AF067846.1|AF067846 Homo sapiens cosmid 48F5 from chromosome 20, complete sequence
          Length = 38868

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 57   tcataaaagaaaatgaaaa 75
            |||||||||||||||||||
Sbjct: 6046 tcataaaagaaaatgaaaa 6064

>gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold
          Length = 1751794

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 56     ctcataaaagaaaatgaaa 74
              |||||||||||||||||||
Sbjct: 382648 ctcataaaagaaaatgaaa 382666

>emb|AL928543.5| Mouse DNA sequence from clone RP23-345P1 on chromosome 2, complete
             sequence
          Length = 90551

 Score = 38.2 bits (19), Expect = 3.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 50    agcacactcataaaagaaa 68
             |||||||||||||||||||
Sbjct: 64618 agcacactcataaaagaaa 64600


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 818,148
Number of Sequences: 3902068
Number of extensions: 818148
Number of successful extensions: 104172
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104127
Number of HSP's gapped (non-prelim): 45
length of query: 75
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 54
effective length of database: 17,151,101,840
effective search space: 926159499360
effective search space used: 926159499360
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)