>gb|AC117570.11| Mus musculus chromosome 9, clone RP23-18M12, complete sequence
          Length = 238598

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 16     taaactagtgttacaacaaaacaa 39
              |||||||| |||||||||||||||
Sbjct: 107862 taaactagagttacaacaaaacaa 107839

>gb|AC151769.3| Mus musculus BAC clone RP24-375O19 from chromosome 9, complete
           sequence
          Length = 186410

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 16  taaactagtgttacaacaaaacaa 39
           |||||||| |||||||||||||||
Sbjct: 359 taaactagagttacaacaaaacaa 382

>emb|AL928553.8| Mouse DNA sequence from clone RP23-312N5 on chromosome 2, complete
             sequence
          Length = 148202

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 107   ttcaaaaacactctatcaagaataataa 134
             |||||| ||| |||||||||||||||||
Sbjct: 17065 ttcaaatacattctatcaagaataataa 17092

>gb|AC111378.6| Rattus norvegicus 4 BAC CH230-126E21 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 171142

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 83    aagaaagcaggcaatacat 101
             |||||||||||||||||||
Sbjct: 82480 aagaaagcaggcaatacat 82498

>gb|AE006162.1| Pasteurella multocida subsp. multocida str. Pm70 section 129 of 204
            of the complete genome
          Length = 12948

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 23   gtgttacaacaaaacaatg 41
            |||||||||||||||||||
Sbjct: 5091 gtgttacaacaaaacaatg 5073

>gb|AC087251.2| Rattus norvegicus strain Brown Norway clone RP31-186N2, complete sequence
          Length = 149358

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 83     aagaaagcaggcaatacat 101
              |||||||||||||||||||
Sbjct: 126841 aagaaagcaggcaatacat 126823

>gb|AE004110.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 18 of
             251 of the complete chromosome
          Length = 15331

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 81    acaagaaagcaggcaatac 99
             |||||||||||||||||||
Sbjct: 10496 acaagaaagcaggcaatac 10478

>emb|AL354740.29| Human DNA sequence from clone RP11-513I15 on chromosome 6 Contains the
             5' end of the GRM4 gene for glutamate receptor
             metabotropic 4, keratin 18 pseudogene 1 (KRT18P1), a
             cytochrome c, somatic (CYCS) pseudogene, the HMGA1 gene
             for high mobility group AT-hook 1, a ribosomal protein L35
             (RPL35) pseudogene, part of a novel gene and CpG islands,
             complete sequence
          Length = 151828

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 57    cttacaacaacgctgcaga 75
             |||||||||||||||||||
Sbjct: 47743 cttacaacaacgctgcaga 47761

>emb|AL138923.9| Human DNA sequence from clone RP11-397J18 on chromosome 10 Contains a
             RAB11B, member RAS oncogene family (H-YPT3) pseudogene, 5'
             end of a novel gene (FLJ33990) and one CpG island,
             complete sequence
          Length = 85322

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 119   ctatcaagaataataactg 137
             |||||||||||||||||||
Sbjct: 52006 ctatcaagaataataactg 52024

>emb|AL035466.3|HS260B21 Human DNA sequence from clone RP1-260B21 on chromosome 6q14.1-14.3,
             complete sequence
          Length = 89089

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 116   actctatcaagaataataa 134
             |||||||||||||||||||
Sbjct: 29951 actctatcaagaataataa 29969

>emb|BX323544.4| Zebrafish DNA sequence from clone DKEY-175I15 in linkage group 7,
             complete sequence
          Length = 182033

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 109   caaaaacactctatcaagaataataac 135
             |||||||||| || |||||||||||||
Sbjct: 37578 caaaaacactttaacaagaataataac 37552

>gb|AC009835.14| Homo sapiens chromosome 18, clone RP11-413I9, complete sequence
          Length = 157979

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 30    aacaaaacaatgctacgga 48
             |||||||||||||||||||
Sbjct: 61895 aacaaaacaatgctacgga 61913

>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold
          Length = 1888123

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 83      aagaaagcaggcaatacat 101
               |||||||||||||||||||
Sbjct: 1620095 aagaaagcaggcaatacat 1620077

>gb|AC012562.5|AC012562 Arabidopsis thaliana chromosome 3 BAC F17O14 genomic sequence,
            complete sequence
          Length = 90721

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 27   tacaacaaaacaatgctac 45
            |||||||||||||||||||
Sbjct: 8512 tacaacaaaacaatgctac 8494

>gb|AC099053.2| Homo sapiens chromosome 3 clone RP11-464H2, complete sequence
          Length = 200069

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 118    tctatcaagaataataact 136
              |||||||||||||||||||
Sbjct: 123779 tctatcaagaataataact 123761

>gb|AC157508.1| Dasypus novemcinctus, clone Dasypus novemcinctus-10241875H10, complete
             sequence
          Length = 42729

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 107   ttcaaaaacactctatcaa 125
             |||||||||||||||||||
Sbjct: 41494 ttcaaaaacactctatcaa 41512

>dbj|AB047087.1| Halocynthia roretzi HrGs mRNA for G protein alpha subunit s class,
           complete cds
          Length = 1611

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 100 atgcgagttcaaaaacact 118
           |||||||||||||||||||
Sbjct: 35  atgcgagttcaaaaacact 17


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,088,283
Number of Sequences: 3902068
Number of extensions: 1088283
Number of successful extensions: 68749
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 68720
Number of HSP's gapped (non-prelim): 29
length of query: 139
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 118
effective length of database: 17,151,101,840
effective search space: 2023830017120
effective search space used: 2023830017120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)