| Clone Name | rbags16d14 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_474399.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3465 Score = 569 bits (287), Expect = e-159 Identities = 443/495 (89%) Strand = Plus / Minus Query: 214 gacatgactcgagagaagccatagcccagggagctcccacttgtagaacaaagctccgtg 273 |||||||||| ||| | || |||||||| || || |||||||||| ||| | ||| ||| Sbjct: 3395 gacatgactctcgagtatccgtagcccagagaacttccacttgtagcacataactctgtg 3336 Query: 274 agttctgacaaatgacgattcctgaactcgttgatcgttgttgcaatctcagacattgga 333 || ||||||| |||||| ||||||||||| |||| |||| ||||||||| |||||||| Sbjct: 3335 agctctgacagatgacggttcctgaactcattgacagttgctgcaatctctgacattggg 3276 Query: 334 agttttgcttgagcaagaacagcagcagccaattggagacttggttctaaggtctcaggg 393 |||||||| || |||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 3275 agttttgcctgtgcaagaacagcagcagccaactggagacttggttccaaggtctcaggg 3216 Query: 394 acaaccgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctg 453 |||||||||| |||||||||||||||||| |||||||||||||| |||||||| |||| | Sbjct: 3215 acaaccgctgttgcaccagctttctccaagttaacaccatgatccacatcatgcgctcgg 3156 Query: 454 acaaatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgca 513 || |||||||||||||||||||| |||||||||| |||||| |||||||||||||||||| Sbjct: 3155 acgaatgtcttcacatttggaaaatatttgctcaaagcccagacagctctataatttgca 3096 Query: 514 ccaggagtatctaaagtaatggcagcagcacatgccctctcagctccaactttgtgcagt 573 ||||| |||||||||||||| ||||| || || ||||||||||| ||||||||||||||| Sbjct: 3095 ccaggggtatctaaagtaatagcagctgcgcaggccctctcagccccaactttgtgcagt 3036 Query: 574 acctctctgctccctgcatcaccgaaatatactggtaggtcaagtgcacgcccaactgct 633 |||||||| || |||||||| ||||||||||||||||||||||| || || |||||||| Sbjct: 3035 acctctctacttcctgcatccccgaaatatactggtaggtcaagcgcgcgtccaactgcc 2976 Query: 634 acccgatcacttcgaacatcaagcgcaacaaatggaattaaccgttctgacaggagttgg 693 ||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||| Sbjct: 2975 acccgatcacttcgaacatcaagtgcaacaaatggaattaatctttctgacaggagttgt 2916 Query: 694 gcgatgatctgccca 708 ||||| ||||||||| Sbjct: 2915 gcgattatctgccca 2901
>dbj|AK121846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101J11, full insert sequence Length = 4264 Score = 569 bits (287), Expect = e-159 Identities = 443/495 (89%) Strand = Plus / Minus Query: 214 gacatgactcgagagaagccatagcccagggagctcccacttgtagaacaaagctccgtg 273 |||||||||| ||| | || |||||||| || || |||||||||| ||| | ||| ||| Sbjct: 3740 gacatgactctcgagtatccgtagcccagagaacttccacttgtagcacataactctgtg 3681 Query: 274 agttctgacaaatgacgattcctgaactcgttgatcgttgttgcaatctcagacattgga 333 || ||||||| |||||| ||||||||||| |||| |||| ||||||||| |||||||| Sbjct: 3680 agctctgacagatgacggttcctgaactcattgacagttgctgcaatctctgacattggg 3621 Query: 334 agttttgcttgagcaagaacagcagcagccaattggagacttggttctaaggtctcaggg 393 |||||||| || |||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 3620 agttttgcctgtgcaagaacagcagcagccaactggagacttggttccaaggtctcaggg 3561 Query: 394 acaaccgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctg 453 |||||||||| |||||||||||||||||| |||||||||||||| |||||||| |||| | Sbjct: 3560 acaaccgctgttgcaccagctttctccaagttaacaccatgatccacatcatgcgctcgg 3501 Query: 454 acaaatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgca 513 || |||||||||||||||||||| |||||||||| |||||| |||||||||||||||||| Sbjct: 3500 acgaatgtcttcacatttggaaaatatttgctcaaagcccagacagctctataatttgca 3441 Query: 514 ccaggagtatctaaagtaatggcagcagcacatgccctctcagctccaactttgtgcagt 573 ||||| |||||||||||||| ||||| || || ||||||||||| ||||||||||||||| Sbjct: 3440 ccaggggtatctaaagtaatagcagctgcgcaggccctctcagccccaactttgtgcagt 3381 Query: 574 acctctctgctccctgcatcaccgaaatatactggtaggtcaagtgcacgcccaactgct 633 |||||||| || |||||||| ||||||||||||||||||||||| || || |||||||| Sbjct: 3380 acctctctacttcctgcatccccgaaatatactggtaggtcaagcgcgcgtccaactgcc 3321 Query: 634 acccgatcacttcgaacatcaagcgcaacaaatggaattaaccgttctgacaggagttgg 693 ||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||| Sbjct: 3320 acccgatcacttcgaacatcaagtgcaacaaatggaattaatctttctgacaggagttgt 3261 Query: 694 gcgatgatctgccca 708 ||||| ||||||||| Sbjct: 3260 gcgattatctgccca 3246
>dbj|AK068406.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151M09, full insert sequence Length = 2581 Score = 569 bits (287), Expect = e-159 Identities = 443/495 (89%) Strand = Plus / Minus Query: 214 gacatgactcgagagaagccatagcccagggagctcccacttgtagaacaaagctccgtg 273 |||||||||| ||| | || |||||||| || || |||||||||| ||| | ||| ||| Sbjct: 2029 gacatgactctcgagtatccgtagcccagagaacttccacttgtagcacataactctgtg 1970 Query: 274 agttctgacaaatgacgattcctgaactcgttgatcgttgttgcaatctcagacattgga 333 || ||||||| |||||| ||||||||||| |||| |||| ||||||||| |||||||| Sbjct: 1969 agctctgacagatgacggttcctgaactcattgacagttgctgcaatctctgacattggg 1910 Query: 334 agttttgcttgagcaagaacagcagcagccaattggagacttggttctaaggtctcaggg 393 |||||||| || |||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 1909 agttttgcctgtgcaagaacagcagcagccaactggagacttggttccaaggtctcaggg 1850 Query: 394 acaaccgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctg 453 |||||||||| |||||||||||||||||| |||||||||||||| |||||||| |||| | Sbjct: 1849 acaaccgctgttgcaccagctttctccaagttaacaccatgatccacatcatgcgctcgg 1790 Query: 454 acaaatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgca 513 || |||||||||||||||||||| |||||||||| |||||| |||||||||||||||||| Sbjct: 1789 acgaatgtcttcacatttggaaaatatttgctcaaagcccagacagctctataatttgca 1730 Query: 514 ccaggagtatctaaagtaatggcagcagcacatgccctctcagctccaactttgtgcagt 573 ||||| |||||||||||||| ||||| || || ||||||||||| ||||||||||||||| Sbjct: 1729 ccaggggtatctaaagtaatagcagctgcgcaggccctctcagccccaactttgtgcagt 1670 Query: 574 acctctctgctccctgcatcaccgaaatatactggtaggtcaagtgcacgcccaactgct 633 |||||||| || |||||||| ||||||||||||||||||||||| || || |||||||| Sbjct: 1669 acctctctacttcctgcatccccgaaatatactggtaggtcaagcgcgcgtccaactgcc 1610 Query: 634 acccgatcacttcgaacatcaagcgcaacaaatggaattaaccgttctgacaggagttgg 693 ||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||| Sbjct: 1609 acccgatcacttcgaacatcaagtgcaacaaatggaattaatctttctgacaggagttgt 1550 Query: 694 gcgatgatctgccca 708 ||||| ||||||||| Sbjct: 1549 gcgattatctgccca 1535
>gb|AY108304.1| Zea mays PCO072828 mRNA sequence Length = 879 Score = 486 bits (245), Expect = e-134 Identities = 388/433 (89%), Gaps = 2/433 (0%) Strand = Plus / Plus Query: 277 tctgacaaatgacgattcctgaactcgttgat-cgttgttgcaatctcagacattggaag 335 ||||||| ||||||||||| |||||||||||| | || || |||||| |||||||| || Sbjct: 365 tctgacagatgacgattccggaactcgttgatgctttcctg-aatctctgacattgggag 423 Query: 336 ttttgcttgagcaagaacagcagcagccaattggagacttggttctaaggtctcagggac 395 ||||||||| ||||||||||||||||| | || |||||||| || |||||||||||||| Sbjct: 424 ttttgcttgtgcaagaacagcagcagctagctgaagacttggctccaaggtctcagggac 483 Query: 396 aaccgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctgac 455 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 484 aaccgctgttgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctaac 543 Query: 456 aaatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgcacc 515 |||||||||||||||||| || |||||| ||| ||||| ||||||||||| |||||||| Sbjct: 544 aaatgtcttcacatttgggaaatatttgttcaatgcccagacagctctatagtttgcacc 603 Query: 516 aggagtatctaaagtaatggcagcagcacatgccctctcagctccaactttgtgcagtac 575 ||| ||||| |||||||| ||||||||||| || || ||||||||||||||||||||||| Sbjct: 604 aggggtatccaaagtaattgcagcagcacaagctctttcagctccaactttgtgcagtac 663 Query: 576 ctctctgctccctgcatcaccgaaatatactggtaggtcaagtgcacgcccaactgctac 635 ||||||||| || ||||| || |||||||| || ||||||||||||||||||||||| || Sbjct: 664 ctctctgcttccagcatccccaaaatataccggaaggtcaagtgcacgcccaactgcaac 723 Query: 636 ccgatcacttcgaacatcaagcgcaacaaatggaattaaccgttctgacaggagttgggc 695 ||||||||||| ||||||||| |||||||| ||||||||||| |||||||||||||| || Sbjct: 724 ccgatcacttctaacatcaagggcaacaaaaggaattaaccgctctgacaggagttgcgc 783 Query: 696 gatgatctgccca 708 | |||||||||| Sbjct: 784 aacgatctgccca 796
>dbj|AK103142.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033120G14, full insert sequence Length = 1306 Score = 420 bits (212), Expect = e-114 Identities = 293/320 (91%) Strand = Plus / Minus Query: 389 cagggacaaccgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtg 448 ||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||| | Sbjct: 1306 cagggacaaccgctgttgcaccagctttctccaagttaacaccatgatccacatcatgcg 1247 Query: 449 ctctgacaaatgtcttcacatttggaaagtatttgctcagagcccatacagctctataat 508 ||| ||| |||||||||||||||||||| |||||||||| |||||| ||||||||||||| Sbjct: 1246 ctcggacgaatgtcttcacatttggaaaatatttgctcaaagcccagacagctctataat 1187 Query: 509 ttgcaccaggagtatctaaagtaatggcagcagcacatgccctctcagctccaactttgt 568 |||||||||| |||||||||||||| ||||| || || ||||||||||| |||||||||| Sbjct: 1186 ttgcaccaggggtatctaaagtaatagcagctgcgcaggccctctcagccccaactttgt 1127 Query: 569 gcagtacctctctgctccctgcatcaccgaaatatactggtaggtcaagtgcacgcccaa 628 ||||||||||||| || |||||||| ||||||||||||||||||||||| || || |||| Sbjct: 1126 gcagtacctctctacttcctgcatccccgaaatatactggtaggtcaagcgcgcgtccaa 1067 Query: 629 ctgctacccgatcacttcgaacatcaagcgcaacaaatggaattaaccgttctgacagga 688 |||| ||||||||||||||||||||||| ||||||||||||||||| | ||||||||||| Sbjct: 1066 ctgccacccgatcacttcgaacatcaagtgcaacaaatggaattaatctttctgacagga 1007 Query: 689 gttgggcgatgatctgccca 708 |||| ||||| ||||||||| Sbjct: 1006 gttgtgcgattatctgccca 987
>emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032F06, complete sequence Length = 148023 Score = 240 bits (121), Expect = 5e-60 Identities = 166/181 (91%) Strand = Plus / Plus Query: 397 accgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctgaca 456 ||||||| |||||||||||||||||| |||||||||||||| |||||||| |||| ||| Sbjct: 103287 accgctgttgcaccagctttctccaagttaacaccatgatccacatcatgcgctcggacg 103346 Query: 457 aatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgcacca 516 |||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||| Sbjct: 103347 aatgtcttcacatttggaaaatatttgctcaaagcccagacagctctataatttgcacca 103406 Query: 517 ggagtatctaaagtaatggcagcagcacatgccctctcagctccaactttgtgcagtacc 576 || |||||||||||||| ||||| || || ||||||||||| |||||||||||||||||| Sbjct: 103407 ggggtatctaaagtaatagcagctgcgcaggccctctcagccccaactttgtgcagtacc 103466 Query: 577 t 577 | Sbjct: 103467 t 103467 Score = 91.7 bits (46), Expect = 3e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 346 gcaagaacagcagcagccaattggagacttggttctaaggtctcagggacaacc 399 |||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 102617 gcaagaacagcagcagccaactggagacttggttccaaggtctcagggacaacc 102670 Score = 87.7 bits (44), Expect = 5e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 573 tacctctctgctccctgcatcaccgaaatatactggtaggtcaagtgcacgcccaactgc 632 ||||||||| || |||||||| ||||||||||||||||||||||| || || |||||||| Sbjct: 103536 tacctctctacttcctgcatccccgaaatatactggtaggtcaagcgcgcgtccaactgc 103595 Query: 633 tacccgatcact 644 ||||||||||| Sbjct: 103596 cacccgatcact 103607 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 643 cttcgaacatcaagcgcaacaaatggaattaaccgttctgacaggagttgggcgatgatc 702 |||||||||||||| ||||||||||||||||| | ||||||||||||||| ||||| ||| Sbjct: 104156 cttcgaacatcaagtgcaacaaatggaattaatctttctgacaggagttgtgcgattatc 104215 Query: 703 t 703 | Sbjct: 104216 t 104216 Score = 73.8 bits (37), Expect = 7e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 261 acaaagctccgtgagttctgacaaatgacgattcctgaactcgttgatcgttgttgcaat 320 ||||| ||| ||||| ||||||| |||||| ||||||||||| |||| |||| |||||| Sbjct: 102436 acaaacctctgtgagctctgacagatgacggttcctgaactcattgacagttgctgcaat 102495 Query: 321 ctcagacattggaagttttgc 341 ||| |||||||| |||||||| Sbjct: 102496 ctctgacattgggagttttgc 102516
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 240 bits (121), Expect = 5e-60 Identities = 166/181 (91%) Strand = Plus / Plus Query: 397 accgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctgaca 456 ||||||| |||||||||||||||||| |||||||||||||| |||||||| |||| ||| Sbjct: 34897174 accgctgttgcaccagctttctccaagttaacaccatgatccacatcatgcgctcggacg 34897233 Query: 457 aatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgcacca 516 |||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||| Sbjct: 34897234 aatgtcttcacatttggaaaatatttgctcaaagcccagacagctctataatttgcacca 34897293 Query: 517 ggagtatctaaagtaatggcagcagcacatgccctctcagctccaactttgtgcagtacc 576 || |||||||||||||| ||||| || || ||||||||||| |||||||||||||||||| Sbjct: 34897294 ggggtatctaaagtaatagcagctgcgcaggccctctcagccccaactttgtgcagtacc 34897353 Query: 577 t 577 | Sbjct: 34897354 t 34897354 Score = 91.7 bits (46), Expect = 3e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 346 gcaagaacagcagcagccaattggagacttggttctaaggtctcagggacaacc 399 |||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 34896504 gcaagaacagcagcagccaactggagacttggttccaaggtctcagggacaacc 34896557 Score = 87.7 bits (44), Expect = 5e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 573 tacctctctgctccctgcatcaccgaaatatactggtaggtcaagtgcacgcccaactgc 632 ||||||||| || |||||||| ||||||||||||||||||||||| || || |||||||| Sbjct: 34897423 tacctctctacttcctgcatccccgaaatatactggtaggtcaagcgcgcgtccaactgc 34897482 Query: 633 tacccgatcact 644 ||||||||||| Sbjct: 34897483 cacccgatcact 34897494 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 643 cttcgaacatcaagcgcaacaaatggaattaaccgttctgacaggagttgggcgatgatc 702 |||||||||||||| ||||||||||||||||| | ||||||||||||||| ||||| ||| Sbjct: 34898043 cttcgaacatcaagtgcaacaaatggaattaatctttctgacaggagttgtgcgattatc 34898102 Query: 703 t 703 | Sbjct: 34898103 t 34898103 Score = 73.8 bits (37), Expect = 7e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 261 acaaagctccgtgagttctgacaaatgacgattcctgaactcgttgatcgttgttgcaat 320 ||||| ||| ||||| ||||||| |||||| ||||||||||| |||| |||| |||||| Sbjct: 34896323 acaaacctctgtgagctctgacagatgacggttcctgaactcattgacagttgctgcaat 34896382 Query: 321 ctcagacattggaagttttgc 341 ||| |||||||| |||||||| Sbjct: 34896383 ctctgacattgggagttttgc 34896403
>emb|AL732352.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0124B04, complete sequence Length = 115564 Score = 240 bits (121), Expect = 5e-60 Identities = 166/181 (91%) Strand = Plus / Plus Query: 397 accgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctgaca 456 ||||||| |||||||||||||||||| |||||||||||||| |||||||| |||| ||| Sbjct: 76613 accgctgttgcaccagctttctccaagttaacaccatgatccacatcatgcgctcggacg 76672 Query: 457 aatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgcacca 516 |||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||| Sbjct: 76673 aatgtcttcacatttggaaaatatttgctcaaagcccagacagctctataatttgcacca 76732 Query: 517 ggagtatctaaagtaatggcagcagcacatgccctctcagctccaactttgtgcagtacc 576 || |||||||||||||| ||||| || || ||||||||||| |||||||||||||||||| Sbjct: 76733 ggggtatctaaagtaatagcagctgcgcaggccctctcagccccaactttgtgcagtacc 76792 Query: 577 t 577 | Sbjct: 76793 t 76793 Score = 91.7 bits (46), Expect = 3e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 346 gcaagaacagcagcagccaattggagacttggttctaaggtctcagggacaacc 399 |||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 75943 gcaagaacagcagcagccaactggagacttggttccaaggtctcagggacaacc 75996 Score = 87.7 bits (44), Expect = 5e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 573 tacctctctgctccctgcatcaccgaaatatactggtaggtcaagtgcacgcccaactgc 632 ||||||||| || |||||||| ||||||||||||||||||||||| || || |||||||| Sbjct: 76862 tacctctctacttcctgcatccccgaaatatactggtaggtcaagcgcgcgtccaactgc 76921 Query: 633 tacccgatcact 644 ||||||||||| Sbjct: 76922 cacccgatcact 76933 Score = 81.8 bits (41), Expect = 3e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 643 cttcgaacatcaagcgcaacaaatggaattaaccgttctgacaggagttgggcgatgatc 702 |||||||||||||| ||||||||||||||||| | ||||||||||||||| ||||| ||| Sbjct: 77446 cttcgaacatcaagtgcaacaaatggaattaatctttctgacaggagttgtgcgattatc 77505 Query: 703 t 703 | Sbjct: 77506 t 77506 Score = 73.8 bits (37), Expect = 7e-10 Identities = 70/81 (86%) Strand = Plus / Plus Query: 261 acaaagctccgtgagttctgacaaatgacgattcctgaactcgttgatcgttgttgcaat 320 ||||| ||| ||||| ||||||| |||||| ||||||||||| |||| |||| |||||| Sbjct: 75762 acaaacctctgtgagctctgacagatgacggttcctgaactcattgacagttgctgcaat 75821 Query: 321 ctcagacattggaagttttgc 341 ||| |||||||| |||||||| Sbjct: 75822 ctctgacattgggagttttgc 75842
>gb|AC123899.15| Medicago truncatula clone mth2-33n6, complete sequence Length = 127126 Score = 121 bits (61), Expect = 3e-24 Identities = 127/149 (85%) Strand = Plus / Minus Query: 409 ccagctttctccaaattaacaccatgatcaacatcatgtgctctgacaaatgtcttcaca 468 ||||| ||||| ||||| || ||||||||||| ||||| || | ||||| ||||||||| Sbjct: 113720 ccagccttctctaaattcactccatgatcaacgtcatgggcgcgaacaaaagtcttcaca 113661 Query: 469 tttggaaagtatttgctcagagcccatacagctctataatttgcaccaggagtatctaaa 528 ||||| ||||| || ||||||||||| || | |||||||||||| ||||| ||||||| | Sbjct: 113660 tttgggaagtacttactcagagcccaaactgttctataatttgctccaggcgtatctaga 113601 Query: 529 gtaatggcagcagcacatgccctctcagc 557 ||||| || |||||||||||||| ||||| Sbjct: 113600 gtaatagctgcagcacatgccctttcagc 113572
>gb|AC148817.3| Medicago truncatula chromosome 7 BAC clone mth2-22c10, complete sequence Length = 123020 Score = 121 bits (61), Expect = 3e-24 Identities = 127/149 (85%) Strand = Plus / Minus Query: 409 ccagctttctccaaattaacaccatgatcaacatcatgtgctctgacaaatgtcttcaca 468 ||||| ||||| ||||| || ||||||||||| ||||| || | ||||| ||||||||| Sbjct: 5917 ccagccttctctaaattcactccatgatcaacgtcatgggcgcgaacaaaagtcttcaca 5858 Query: 469 tttggaaagtatttgctcagagcccatacagctctataatttgcaccaggagtatctaaa 528 ||||| ||||| || ||||||||||| || | |||||||||||| ||||| ||||||| | Sbjct: 5857 tttgggaagtacttactcagagcccaaactgttctataatttgctccaggcgtatctaga 5798 Query: 529 gtaatggcagcagcacatgccctctcagc 557 ||||| || |||||||||||||| ||||| Sbjct: 5797 gtaatagctgcagcacatgccctttcagc 5769
>ref|NM_116288.2| Arabidopsis thaliana KEA2; potassium:hydrogen antiporter AT4G00630 (KEA2) mRNA, complete cds Length = 1884 Score = 117 bits (59), Expect = 5e-23 Identities = 311/395 (78%) Strand = Plus / Minus Query: 274 agttctgacaaatgacgattcctgaactcgttgatcgttgttgcaatctcagacattgga 333 ||||| ||||| |||||| ||||||||||||||||||||||| || || || | || Sbjct: 1751 agttcagacaagtgacgagatctgaactcgttgatcgttgttgctatttctgatgtaggt 1692 Query: 334 agttttgcttgagcaagaacagcagcagccaattggagacttggttctaaggtctcaggg 393 | ||| || || |||||||||||||| || || || ||||||||||| | |||||||| Sbjct: 1691 aatttggcctgtgcaagaacagcagctgctaactgaagacttggttccagcgtctcagga 1632 Query: 394 acaaccgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctg 453 ||||| || | || || ||||| || | ||| | |||||||||||| |||||||| | | Sbjct: 1631 acaacagcggtagcgccggctttttcaagattgagaccatgatcaacgtcatgtgcacgg 1572 Query: 454 acaaatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgca 513 ||||| || || ||||| || || |||||||| |||||||| ||| || |||||||| Sbjct: 1571 acaaaggttttgacattggggaaatatttgctaagagcccagacacacctgtaatttgct 1512 Query: 514 ccaggagtatctaaagtaatggcagcagcacatgccctctcagctccaactttgtgcagt 573 ||||| || ||||||| ||| || ||||||||||| || || || || | |||||| ||| Sbjct: 1511 ccaggtgtgtctaaagcaatagccgcagcacatgctctatctgccccgattttgtggagt 1452 Query: 574 acctctctgctccctgcatcaccgaaatatactggtaggtcaagtgcacgcccaactgct 633 |||||||| || || || || || ||||| ||||| || || || | ||| |||| |||| Sbjct: 1451 acctctctactaccagcgtctccaaaataaactggaagatctagggaacgaccaattgct 1392 Query: 634 acccgatcacttcgaacatcaagcgcaacaaatgg 668 || | |||||| | ||||| || ||||||||||| Sbjct: 1391 actctatcactgctgacatcgagggcaacaaatgg 1357
>dbj|AP006402.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT34J23, TM0284, complete sequence Length = 92675 Score = 95.6 bits (48), Expect = 2e-16 Identities = 123/148 (83%) Strand = Plus / Plus Query: 430 ccatgatcaacatcatgtgctctgacaaatgtcttcacatttggaaagtatttgctcaga 489 ||||||||||| ||||| || | ||||| ||||||||||| || ||||| ||||| ||| Sbjct: 56792 ccatgatcaacgtcatgggcacgaacaaaagtcttcacattagggaagtacttgctaaga 56851 Query: 490 gcccatacagctctataatttgcaccaggagtatctaaagtaatggcagcagcacatgcc 549 ||||| || | |||||||||||| || || ||||||| ||| || || |||||||||||| Sbjct: 56852 gcccaaactgttctataatttgctcccggcgtatctagagttattgctgcagcacatgcc 56911 Query: 550 ctctcagctccaactttgtgcagtacct 577 || ||||| |||| ||||| ||||||| Sbjct: 56912 ctttcagccccaatcttgtgtagtacct 56939
>emb|AL161472.2|ATCHRIV2 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 2 Length = 197975 Score = 73.8 bits (37), Expect = 7e-10 Identities = 121/149 (81%) Strand = Plus / Plus Query: 429 accatgatcaacatcatgtgctctgacaaatgtcttcacatttggaaagtatttgctcag 488 |||||||||||| |||||||| | |||||| || || ||||| || || |||||||| || Sbjct: 68879 accatgatcaacgtcatgtgcacggacaaaggttttgacattggggaaatatttgctaag 68938 Query: 489 agcccatacagctctataatttgcaccaggagtatctaaagtaatggcagcagcacatgc 548 |||||| ||| || |||||||| ||||| || ||||||| ||| || ||||||||||| Sbjct: 68939 agcccagacacacctgtaatttgctccaggtgtgtctaaagcaatagccgcagcacatgc 68998 Query: 549 cctctcagctccaactttgtgcagtacct 577 || || || || | |||||| ||||||| Sbjct: 68999 tctatctgccccgattttgtggagtacct 69027 Score = 48.1 bits (24), Expect = 0.040 Identities = 39/44 (88%) Strand = Plus / Plus Query: 274 agttctgacaaatgacgattcctgaactcgttgatcgttgttgc 317 ||||| ||||| |||||| ||||||||||||||||||||||| Sbjct: 68548 agttcagacaagtgacgagatctgaactcgttgatcgttgttgc 68591 Score = 44.1 bits (22), Expect = 0.62 Identities = 46/54 (85%) Strand = Plus / Plus Query: 346 gcaagaacagcagcagccaattggagacttggttctaaggtctcagggacaacc 399 |||||||||||||| || || || ||||||||||| | |||||||| |||||| Sbjct: 68703 gcaagaacagcagctgctaactgaagacttggttccagcgtctcaggaacaacc 68756
>gb|AF058919.2|F6N23 Arabidopsis thaliana BAC F6N23 Length = 91849 Score = 73.8 bits (37), Expect = 7e-10 Identities = 121/149 (81%) Strand = Plus / Plus Query: 429 accatgatcaacatcatgtgctctgacaaatgtcttcacatttggaaagtatttgctcag 488 |||||||||||| |||||||| | |||||| || || ||||| || || |||||||| || Sbjct: 50005 accatgatcaacgtcatgtgcacggacaaaggttttgacattggggaaatatttgctaag 50064 Query: 489 agcccatacagctctataatttgcaccaggagtatctaaagtaatggcagcagcacatgc 548 |||||| ||| || |||||||| ||||| || ||||||| ||| || ||||||||||| Sbjct: 50065 agcccagacacacctgtaatttgctccaggtgtgtctaaagcaatagccgcagcacatgc 50124 Query: 549 cctctcagctccaactttgtgcagtacct 577 || || || || | |||||| ||||||| Sbjct: 50125 tctatctgccccgattttgtggagtacct 50153 Score = 48.1 bits (24), Expect = 0.040 Identities = 39/44 (88%) Strand = Plus / Plus Query: 274 agttctgacaaatgacgattcctgaactcgttgatcgttgttgc 317 ||||| ||||| |||||| ||||||||||||||||||||||| Sbjct: 49674 agttcagacaagtgacgagatctgaactcgttgatcgttgttgc 49717 Score = 44.1 bits (22), Expect = 0.62 Identities = 46/54 (85%) Strand = Plus / Plus Query: 346 gcaagaacagcagcagccaattggagacttggttctaaggtctcagggacaacc 399 |||||||||||||| || || || ||||||||||| | |||||||| |||||| Sbjct: 49829 gcaagaacagcagctgctaactgaagacttggttccagcgtctcaggaacaacc 49882
>ref|NM_100062.2| Arabidopsis thaliana KEA1 (K EFFLUX ANTIPORTER 1); potassium:hydrogen antiporter AT1G01790 (KEA1) mRNA, complete cds Length = 2385 Score = 61.9 bits (31), Expect = 3e-06 Identities = 244/315 (77%) Strand = Plus / Minus Query: 265 agctccgtgagttctgacaaatgacgattcctgaactcgttgatcgttgttgcaatctca 324 ||||| || ||||| ||||| ||||| | ||||||||||| ||||| ||||||| || Sbjct: 2044 agctcggtcagttcagacaagtgacgggttctgaactcgttaatcgtgtttgcaatttcc 1985 Query: 325 gacattggaagttttgcttgagcaagaacagcagcagccaattggagacttggttctaag 384 || | || | |||||| ||||||||||||||||| ||||| || ||||| || || | Sbjct: 1984 gatgtcggtaattttgcctgagcaagaacagcagctgccaactgtagactaggctccaga 1925 Query: 385 gtctcagggacaaccgctgatgcaccagctttctccaaattaacaccatgatcaacatca 444 ||||| |||||||| || | ||||| ||||| || | ||||| ||||||| ||||||| Sbjct: 1924 gtctccgggacaactgcagtagcaccggctttttctagattaagaccatgaacaacatcg 1865 Query: 445 tgtgctctgacaaatgtcttcacatttggaaagtatttgctcagagcccatacagctcta 504 || || | |||||| || || ||||| || | | ||||||| |||||| ||| ||| Sbjct: 1864 tgagcacggacaaaagttttgacattggggtaaaacttgctcaaagcccaaacacatctg 1805 Query: 505 taatttgcaccaggagtatctaaagtaatggcagcagcacatgccctctcagctccaact 564 || ||||| || || | ||||| | || ||||||||||||| ||| ||||||||| | Sbjct: 1804 tagtttgctcctggtgcgtctaaggcaaccacagcagcacatgctctcccagctccaatt 1745 Query: 565 ttgtgcagtacctct 579 ||||| || |||||| Sbjct: 1744 ttgtggagaacctct 1730
>gb|AF003382.1|AF003382 Arabidopsis thaliana K efflux antiporter KEA1 mRNA, complete cds Length = 2350 Score = 61.9 bits (31), Expect = 3e-06 Identities = 244/315 (77%) Strand = Plus / Minus Query: 265 agctccgtgagttctgacaaatgacgattcctgaactcgttgatcgttgttgcaatctca 324 ||||| || ||||| ||||| ||||| | ||||||||||| ||||| ||||||| || Sbjct: 2044 agctcggtcagttcagacaagtgacgggttctgaactcgttaatcgtgtttgcaatttcc 1985 Query: 325 gacattggaagttttgcttgagcaagaacagcagcagccaattggagacttggttctaag 384 || | || | |||||| ||||||||||||||||| ||||| || ||||| || || | Sbjct: 1984 gatgtcggtaattttgcctgagcaagaacagcagctgccaactgtagactaggctccaga 1925 Query: 385 gtctcagggacaaccgctgatgcaccagctttctccaaattaacaccatgatcaacatca 444 ||||| |||||||| || | ||||| ||||| || | ||||| ||||||| ||||||| Sbjct: 1924 gtctccgggacaactgcagtagcaccggctttttctagattaagaccatgaacaacatcg 1865 Query: 445 tgtgctctgacaaatgtcttcacatttggaaagtatttgctcagagcccatacagctcta 504 || || | |||||| || || ||||| || | | ||||||| |||||| ||| ||| Sbjct: 1864 tgagcacggacaaaagttttgacattggggtaaaacttgctcaaagcccaaacacatctg 1805 Query: 505 taatttgcaccaggagtatctaaagtaatggcagcagcacatgccctctcagctccaact 564 || ||||| || || | ||||| | || ||||||||||||| ||| ||||||||| | Sbjct: 1804 tagtttgctcctggtgcgtctaaggcaaccacagcagcacatgctctcccagctccaatt 1745 Query: 565 ttgtgcagtacctct 579 ||||| || |||||| Sbjct: 1744 ttgtggagaacctct 1730
>gb|M25090.1|RABUTERG1 Oryctolagus cuniculus uteroglobin (UGL) gene, exon 1 Length = 2161 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 351 aacagcagcagccaattggagacttg 376 |||||||||||||| ||||||||||| Sbjct: 1089 aacagcagcagccacttggagacttg 1064
>gb|AC009273.2|T1N6 Sequence of BAC T1N6 from Arabidopsis thaliana chromosome 1, complete sequence Length = 76175 Score = 44.1 bits (22), Expect = 0.62 Identities = 31/34 (91%) Strand = Plus / Minus Query: 536 cagcagcacatgccctctcagctccaactttgtg 569 ||||||||||||| ||| ||||||||| |||||| Sbjct: 61385 cagcagcacatgctctcccagctccaattttgtg 61352 Score = 42.1 bits (21), Expect = 2.5 Identities = 48/57 (84%) Strand = Plus / Minus Query: 343 tgagcaagaacagcagcagccaattggagacttggttctaaggtctcagggacaacc 399 ||||||||||||||||| ||||| || ||||| || || | ||||| ||||||||| Sbjct: 61670 tgagcaagaacagcagctgccaactgtagactaggctccagagtctccgggacaacc 61614
>emb|X01423.1|OCUTGLOB Rabbit uteroglobin gene Length = 6568 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 351 aacagcagcagccaattggagacttg 376 |||||||||||||| ||||||||||| Sbjct: 3945 aacagcagcagccacttggagacttg 3920
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 tcgctctcgtcgtcggagacc 198 ||||||||||||||||||||| Sbjct: 2819784 tcgctctcgtcgtcggagacc 2819764
>ref|XM_428870.1| PREDICTED: Gallus gallus LOC431319 (LOC431319), mRNA Length = 663 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 232 ccatagcccagggagctccca 252 ||||||||||||||||||||| Sbjct: 335 ccatagcccagggagctccca 315
>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome Length = 2414465 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 gaagttttgcttgagcaagaa 352 ||||||||||||||||||||| Sbjct: 2001471 gaagttttgcttgagcaagaa 2001491
>emb|CR406592.1| Gallus gallus finished cDNA, clone ChEST657j15 Length = 1160 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 338 ttgcttgagcaagaacagcagcagc 362 ||||||||||||||| ||||||||| Sbjct: 530 ttgcttgagcaagaaaagcagcagc 554
>dbj|AP001875.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2307G24, complete sequence Length = 34000 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 338 ttgcttgagcaagaacagcagcagc 362 |||||||||||| |||||||||||| Sbjct: 16593 ttgcttgagcaataacagcagcagc 16569
>emb|CR933780.12| Zebrafish DNA sequence from clone DKEY-60F6 in linkage group 5, complete sequence Length = 227454 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 539 cagcacatgccctctcagctccaac 563 ||||| ||||||||||||||||||| Sbjct: 161466 cagcagatgccctctcagctccaac 161442
>gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete genome Length = 1913428 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 339 tgcttgagcaagaacagcagcagc 362 ||||||||||||||| |||||||| Sbjct: 1136447 tgcttgagcaagaacggcagcagc 1136470
>gb|AC122354.4| Mus musculus BAC clone RP23-401A2 from chromosome 12, complete sequence Length = 192581 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 348 aagaacagcagcagccaattggag 371 ||||||||||||||||||| |||| Sbjct: 45909 aagaacagcagcagccaatgggag 45886
>gb|AC090821.13| Homo sapiens chromosome 8, clone CTD-2309H9, complete sequence Length = 166843 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 atggaagagctgaaatgttg 38 |||||||||||||||||||| Sbjct: 80122 atggaagagctgaaatgttg 80103
>gb|U50068.2| Caenorhabditis elegans cosmid C01G5, complete sequence Length = 38627 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 agttttgcttgagcaagaac 353 |||||||||||||||||||| Sbjct: 25164 agttttgcttgagcaagaac 25145
>gb|AC143341.8| Medicago truncatula clone mth2-7a11, complete sequence Length = 111446 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 atacagctctataatttgca 513 |||||||||||||||||||| Sbjct: 67490 atacagctctataatttgca 67471
>emb|CR855865.5| Zebrafish DNA sequence from clone DKEY-267L2 in linkage group 3, complete sequence Length = 149895 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 655 agcgcaacaaatggaattaa 674 |||||||||||||||||||| Sbjct: 86548 agcgcaacaaatggaattaa 86529
>emb|AL139349.36| Human DNA sequence from clone RP11-261P9 on chromosome 20 Contains the 3' end of the STX16 gene for syntaxin 16, the NPEPL1 gene for aminopeptidase-like 1 and one CpG island, complete sequence Length = 68743 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 ttgcaatctcagacattgga 333 |||||||||||||||||||| Sbjct: 36092 ttgcaatctcagacattgga 36111
>emb|AL138823.14| Human DNA sequence from clone RP11-64J21 on chromosome 13 Contains part of a novel gene similar to tumour-associated hydroquinone (NADH) oxidase TNOX, a ribosomal protein L36 (RPL36) pseudogene and a CpG island, complete sequence Length = 175112 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 tccgtgagttctgacaaatg 287 |||||||||||||||||||| Sbjct: 171395 tccgtgagttctgacaaatg 171376
>emb|BX901909.5| Zebrafish DNA sequence from clone CH211-42I14 in linkage group 3, complete sequence Length = 90216 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 655 agcgcaacaaatggaattaa 674 |||||||||||||||||||| Sbjct: 32474 agcgcaacaaatggaattaa 32455
>emb|AL596255.17| Mouse DNA sequence from clone RP23-6K20 on chromosome 11 Contains the 3' end of the Myh13 gene for skeletal muscle myosin heavy polypeptide 13, the 5' end of the Gas7 gene for growth arrest specific 7, a novel gene and a CpG island, complete sequence Length = 251096 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 ttgagcaagaacagcagcagccaa 365 |||||||||||||||||| ||||| Sbjct: 59681 ttgagcaagaacagcagctgccaa 59704
>emb|BX004866.22| Mouse DNA sequence from clone RP23-360A7 on chromosome 4 Contains a ribosomal protein 7a (Rpl7a) pseudogene, complete sequence Length = 161600 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 450 tctgacaaatgtcttcacat 469 |||||||||||||||||||| Sbjct: 27418 tctgacaaatgtcttcacat 27437
>ref|NM_068595.1| Caenorhabditis elegans C01G5.3 (C01G5.3) mRNA, complete cds Length = 1440 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 agttttgcttgagcaagaac 353 |||||||||||||||||||| Sbjct: 1434 agttttgcttgagcaagaac 1415
>gb|AC154576.2| Mus musculus BAC clone RP23-372B6 from chromosome 14, complete sequence Length = 152380 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 atgtcctacctaccaaatgg 22 |||||||||||||||||||| Sbjct: 114722 atgtcctacctaccaaatgg 114703
>emb|BX322570.4| Zebrafish DNA sequence from clone DKEY-27H10 in linkage group 1, complete sequence Length = 185032 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 agctgaaatgttgccaaaga 45 |||||||||||||||||||| Sbjct: 58010 agctgaaatgttgccaaaga 58029
>emb|AL844217.7| Zebrafish DNA sequence from clone DKEY-218L17, complete sequence Length = 246026 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 agctgaaatgttgccaaaga 45 |||||||||||||||||||| Sbjct: 22053 agctgaaatgttgccaaaga 22072
>emb|BX927169.7| Zebrafish DNA sequence from clone DKEY-115P24 in linkage group 18, complete sequence Length = 29649 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 catgatcaacatcatgtgct 450 |||||||||||||||||||| Sbjct: 10363 catgatcaacatcatgtgct 10382
>emb|AL591669.5| Zebrafish DNA sequence from clone BUSM1-163L24 in linkage group 3, complete sequence Length = 107839 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 655 agcgcaacaaatggaattaa 674 |||||||||||||||||||| Sbjct: 62208 agcgcaacaaatggaattaa 62189
>gb|AY110567.1| Zea mays CL7839_1 mRNA sequence Length = 1734 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 ccacttgtagaacaaagctc 269 |||||||||||||||||||| Sbjct: 1612 ccacttgtagaacaaagctc 1593
>gb|AC172989.2| Mus musculus BAC clone RP24-556J6 from chromosome 15, complete sequence Length = 184996 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 aagccatagcccagggagctccca 252 |||||||| ||||||||||||||| Sbjct: 161496 aagccataccccagggagctccca 161519
>gb|AC167818.4| Mus musculus BAC clone RP23-120O24 from chromosome 15, complete sequence Length = 203474 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 229 aagccatagcccagggagctccca 252 |||||||| ||||||||||||||| Sbjct: 126055 aagccataccccagggagctccca 126078
>emb|CR974587.14| Pig DNA sequence from clone CH242-288P9 on chromosome 7, complete sequence Length = 165092 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 ccagggagctcccacttgta 258 |||||||||||||||||||| Sbjct: 116238 ccagggagctcccacttgta 116219 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,049,683 Number of Sequences: 3902068 Number of extensions: 6049683 Number of successful extensions: 117585 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 46 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 117391 Number of HSP's gapped (non-prelim): 191 length of query: 708 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 685 effective length of database: 17,143,297,704 effective search space: 11743158927240 effective search space used: 11743158927240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)