ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags16d14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_474399.1| Oryza sativa (japonica cultivar-group), predic... 569 e-159
2dbj|AK121846.1| Oryza sativa (japonica cultivar-group) cDNA clon... 569 e-159
3dbj|AK068406.1| Oryza sativa (japonica cultivar-group) cDNA clon... 569 e-159
4gb|AY108304.1| Zea mays PCO072828 mRNA sequence 486 e-134
5dbj|AK103142.1| Oryza sativa (japonica cultivar-group) cDNA clon... 420 e-114
6emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4,... 240 5e-60
7dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 240 5e-60
8emb|AL732352.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 240 5e-60
9gb|AC123899.15| Medicago truncatula clone mth2-33n6, complete se... 121 3e-24
10gb|AC148817.3| Medicago truncatula chromosome 7 BAC clone mth2-2... 121 3e-24
11ref|NM_116288.2| Arabidopsis thaliana KEA2; potassium:hydrogen a... 117 5e-23
12dbj|AP006402.1| Lotus japonicus genomic DNA, chromosome 1, clone... 96 2e-16
13emb|AL161472.2|ATCHRIV2 Arabidopsis thaliana DNA chromosome 4, c... 74 7e-10
14gb|AF058919.2|F6N23 Arabidopsis thaliana BAC F6N23 74 7e-10
15ref|NM_100062.2| Arabidopsis thaliana KEA1 (K EFFLUX ANTIPORTER ... 62 3e-06
16gb|AF003382.1|AF003382 Arabidopsis thaliana K efflux antiporter ... 62 3e-06
17gb|M25090.1|RABUTERG1 Oryctolagus cuniculus uteroglobin (UGL) ge... 44 0.62
18gb|AC009273.2|T1N6 Sequence of BAC T1N6 from Arabidopsis thalian... 44 0.62
19emb|X01423.1|OCUTGLOB Rabbit uteroglobin gene 44 0.62
20gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 42 2.5
21ref|XM_428870.1| PREDICTED: Gallus gallus LOC431319 (LOC431319),... 42 2.5
22emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete g... 42 2.5
23emb|CR406592.1| Gallus gallus finished cDNA, clone ChEST657j15 42 2.5
24dbj|AP001875.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 2.5
25emb|CR933780.12| Zebrafish DNA sequence from clone DKEY-60F6 in ... 42 2.5
26gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete ... 40 9.7
27gb|AC122354.4| Mus musculus BAC clone RP23-401A2 from chromosome... 40 9.7
28gb|AC090821.13| Homo sapiens chromosome 8, clone CTD-2309H9, com... 40 9.7
29gb|U50068.2| Caenorhabditis elegans cosmid C01G5, complete sequence 40 9.7
30gb|AC143341.8| Medicago truncatula clone mth2-7a11, complete seq... 40 9.7
31emb|CR855865.5| Zebrafish DNA sequence from clone DKEY-267L2 in ... 40 9.7
32emb|AL139349.36| Human DNA sequence from clone RP11-261P9 on chr... 40 9.7
33emb|AL138823.14| Human DNA sequence from clone RP11-64J21 on chr... 40 9.7
34emb|BX901909.5| Zebrafish DNA sequence from clone CH211-42I14 in... 40 9.7
35emb|AL596255.17| Mouse DNA sequence from clone RP23-6K20 on chro... 40 9.7
36emb|BX004866.22| Mouse DNA sequence from clone RP23-360A7 on chr... 40 9.7
37ref|NM_068595.1| Caenorhabditis elegans C01G5.3 (C01G5.3) mRNA, ... 40 9.7
38gb|AC154576.2| Mus musculus BAC clone RP23-372B6 from chromosome... 40 9.7
39emb|BX322570.4| Zebrafish DNA sequence from clone DKEY-27H10 in ... 40 9.7
40emb|AL844217.7| Zebrafish DNA sequence from clone DKEY-218L17, c... 40 9.7
41emb|BX927169.7| Zebrafish DNA sequence from clone DKEY-115P24 in... 40 9.7
42emb|AL591669.5| Zebrafish DNA sequence from clone BUSM1-163L24 i... 40 9.7
43gb|AY110567.1| Zea mays CL7839_1 mRNA sequence 40 9.7
44gb|AC172989.2| Mus musculus BAC clone RP24-556J6 from chromosome... 40 9.7
45gb|AC167818.4| Mus musculus BAC clone RP23-120O24 from chromosom... 40 9.7
46emb|CR974587.14| Pig DNA sequence from clone CH242-288P9 on chro... 40 9.7

>ref|XM_474399.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3465

 Score =  569 bits (287), Expect = e-159
 Identities = 443/495 (89%)
 Strand = Plus / Minus

                                                                        
Query: 214  gacatgactcgagagaagccatagcccagggagctcccacttgtagaacaaagctccgtg 273
            ||||||||||  ||| | || |||||||| || || |||||||||| ||| | ||| |||
Sbjct: 3395 gacatgactctcgagtatccgtagcccagagaacttccacttgtagcacataactctgtg 3336

                                                                        
Query: 274  agttctgacaaatgacgattcctgaactcgttgatcgttgttgcaatctcagacattgga 333
            || ||||||| |||||| ||||||||||| ||||  |||| ||||||||| |||||||| 
Sbjct: 3335 agctctgacagatgacggttcctgaactcattgacagttgctgcaatctctgacattggg 3276

                                                                        
Query: 334  agttttgcttgagcaagaacagcagcagccaattggagacttggttctaaggtctcaggg 393
            |||||||| || |||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 3275 agttttgcctgtgcaagaacagcagcagccaactggagacttggttccaaggtctcaggg 3216

                                                                        
Query: 394  acaaccgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctg 453
            |||||||||| |||||||||||||||||| |||||||||||||| |||||||| |||| |
Sbjct: 3215 acaaccgctgttgcaccagctttctccaagttaacaccatgatccacatcatgcgctcgg 3156

                                                                        
Query: 454  acaaatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgca 513
            || |||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||
Sbjct: 3155 acgaatgtcttcacatttggaaaatatttgctcaaagcccagacagctctataatttgca 3096

                                                                        
Query: 514  ccaggagtatctaaagtaatggcagcagcacatgccctctcagctccaactttgtgcagt 573
            ||||| |||||||||||||| ||||| || || ||||||||||| |||||||||||||||
Sbjct: 3095 ccaggggtatctaaagtaatagcagctgcgcaggccctctcagccccaactttgtgcagt 3036

                                                                        
Query: 574  acctctctgctccctgcatcaccgaaatatactggtaggtcaagtgcacgcccaactgct 633
            |||||||| || |||||||| ||||||||||||||||||||||| || || |||||||| 
Sbjct: 3035 acctctctacttcctgcatccccgaaatatactggtaggtcaagcgcgcgtccaactgcc 2976

                                                                        
Query: 634  acccgatcacttcgaacatcaagcgcaacaaatggaattaaccgttctgacaggagttgg 693
            ||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||| 
Sbjct: 2975 acccgatcacttcgaacatcaagtgcaacaaatggaattaatctttctgacaggagttgt 2916

                           
Query: 694  gcgatgatctgccca 708
            ||||| |||||||||
Sbjct: 2915 gcgattatctgccca 2901



to top

>dbj|AK121846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101J11, full
            insert sequence
          Length = 4264

 Score =  569 bits (287), Expect = e-159
 Identities = 443/495 (89%)
 Strand = Plus / Minus

                                                                        
Query: 214  gacatgactcgagagaagccatagcccagggagctcccacttgtagaacaaagctccgtg 273
            ||||||||||  ||| | || |||||||| || || |||||||||| ||| | ||| |||
Sbjct: 3740 gacatgactctcgagtatccgtagcccagagaacttccacttgtagcacataactctgtg 3681

                                                                        
Query: 274  agttctgacaaatgacgattcctgaactcgttgatcgttgttgcaatctcagacattgga 333
            || ||||||| |||||| ||||||||||| ||||  |||| ||||||||| |||||||| 
Sbjct: 3680 agctctgacagatgacggttcctgaactcattgacagttgctgcaatctctgacattggg 3621

                                                                        
Query: 334  agttttgcttgagcaagaacagcagcagccaattggagacttggttctaaggtctcaggg 393
            |||||||| || |||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 3620 agttttgcctgtgcaagaacagcagcagccaactggagacttggttccaaggtctcaggg 3561

                                                                        
Query: 394  acaaccgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctg 453
            |||||||||| |||||||||||||||||| |||||||||||||| |||||||| |||| |
Sbjct: 3560 acaaccgctgttgcaccagctttctccaagttaacaccatgatccacatcatgcgctcgg 3501

                                                                        
Query: 454  acaaatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgca 513
            || |||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||
Sbjct: 3500 acgaatgtcttcacatttggaaaatatttgctcaaagcccagacagctctataatttgca 3441

                                                                        
Query: 514  ccaggagtatctaaagtaatggcagcagcacatgccctctcagctccaactttgtgcagt 573
            ||||| |||||||||||||| ||||| || || ||||||||||| |||||||||||||||
Sbjct: 3440 ccaggggtatctaaagtaatagcagctgcgcaggccctctcagccccaactttgtgcagt 3381

                                                                        
Query: 574  acctctctgctccctgcatcaccgaaatatactggtaggtcaagtgcacgcccaactgct 633
            |||||||| || |||||||| ||||||||||||||||||||||| || || |||||||| 
Sbjct: 3380 acctctctacttcctgcatccccgaaatatactggtaggtcaagcgcgcgtccaactgcc 3321

                                                                        
Query: 634  acccgatcacttcgaacatcaagcgcaacaaatggaattaaccgttctgacaggagttgg 693
            ||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||| 
Sbjct: 3320 acccgatcacttcgaacatcaagtgcaacaaatggaattaatctttctgacaggagttgt 3261

                           
Query: 694  gcgatgatctgccca 708
            ||||| |||||||||
Sbjct: 3260 gcgattatctgccca 3246



to top

>dbj|AK068406.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151M09, full
            insert sequence
          Length = 2581

 Score =  569 bits (287), Expect = e-159
 Identities = 443/495 (89%)
 Strand = Plus / Minus

                                                                        
Query: 214  gacatgactcgagagaagccatagcccagggagctcccacttgtagaacaaagctccgtg 273
            ||||||||||  ||| | || |||||||| || || |||||||||| ||| | ||| |||
Sbjct: 2029 gacatgactctcgagtatccgtagcccagagaacttccacttgtagcacataactctgtg 1970

                                                                        
Query: 274  agttctgacaaatgacgattcctgaactcgttgatcgttgttgcaatctcagacattgga 333
            || ||||||| |||||| ||||||||||| ||||  |||| ||||||||| |||||||| 
Sbjct: 1969 agctctgacagatgacggttcctgaactcattgacagttgctgcaatctctgacattggg 1910

                                                                        
Query: 334  agttttgcttgagcaagaacagcagcagccaattggagacttggttctaaggtctcaggg 393
            |||||||| || |||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 1909 agttttgcctgtgcaagaacagcagcagccaactggagacttggttccaaggtctcaggg 1850

                                                                        
Query: 394  acaaccgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctg 453
            |||||||||| |||||||||||||||||| |||||||||||||| |||||||| |||| |
Sbjct: 1849 acaaccgctgttgcaccagctttctccaagttaacaccatgatccacatcatgcgctcgg 1790

                                                                        
Query: 454  acaaatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgca 513
            || |||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||
Sbjct: 1789 acgaatgtcttcacatttggaaaatatttgctcaaagcccagacagctctataatttgca 1730

                                                                        
Query: 514  ccaggagtatctaaagtaatggcagcagcacatgccctctcagctccaactttgtgcagt 573
            ||||| |||||||||||||| ||||| || || ||||||||||| |||||||||||||||
Sbjct: 1729 ccaggggtatctaaagtaatagcagctgcgcaggccctctcagccccaactttgtgcagt 1670

                                                                        
Query: 574  acctctctgctccctgcatcaccgaaatatactggtaggtcaagtgcacgcccaactgct 633
            |||||||| || |||||||| ||||||||||||||||||||||| || || |||||||| 
Sbjct: 1669 acctctctacttcctgcatccccgaaatatactggtaggtcaagcgcgcgtccaactgcc 1610

                                                                        
Query: 634  acccgatcacttcgaacatcaagcgcaacaaatggaattaaccgttctgacaggagttgg 693
            ||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||| 
Sbjct: 1609 acccgatcacttcgaacatcaagtgcaacaaatggaattaatctttctgacaggagttgt 1550

                           
Query: 694  gcgatgatctgccca 708
            ||||| |||||||||
Sbjct: 1549 gcgattatctgccca 1535



to top

>gb|AY108304.1| Zea mays PCO072828 mRNA sequence
          Length = 879

 Score =  486 bits (245), Expect = e-134
 Identities = 388/433 (89%), Gaps = 2/433 (0%)
 Strand = Plus / Plus

                                                                       
Query: 277 tctgacaaatgacgattcctgaactcgttgat-cgttgttgcaatctcagacattggaag 335
           ||||||| ||||||||||| |||||||||||| | ||  || |||||| |||||||| ||
Sbjct: 365 tctgacagatgacgattccggaactcgttgatgctttcctg-aatctctgacattgggag 423

                                                                       
Query: 336 ttttgcttgagcaagaacagcagcagccaattggagacttggttctaaggtctcagggac 395
           ||||||||| ||||||||||||||||| |  || |||||||| || ||||||||||||||
Sbjct: 424 ttttgcttgtgcaagaacagcagcagctagctgaagacttggctccaaggtctcagggac 483

                                                                       
Query: 396 aaccgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctgac 455
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 484 aaccgctgttgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctaac 543

                                                                       
Query: 456 aaatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgcacc 515
           |||||||||||||||||| || |||||| |||  ||||| ||||||||||| ||||||||
Sbjct: 544 aaatgtcttcacatttgggaaatatttgttcaatgcccagacagctctatagtttgcacc 603

                                                                       
Query: 516 aggagtatctaaagtaatggcagcagcacatgccctctcagctccaactttgtgcagtac 575
           ||| ||||| |||||||| ||||||||||| || || |||||||||||||||||||||||
Sbjct: 604 aggggtatccaaagtaattgcagcagcacaagctctttcagctccaactttgtgcagtac 663

                                                                       
Query: 576 ctctctgctccctgcatcaccgaaatatactggtaggtcaagtgcacgcccaactgctac 635
           ||||||||| || ||||| || |||||||| || ||||||||||||||||||||||| ||
Sbjct: 664 ctctctgcttccagcatccccaaaatataccggaaggtcaagtgcacgcccaactgcaac 723

                                                                       
Query: 636 ccgatcacttcgaacatcaagcgcaacaaatggaattaaccgttctgacaggagttgggc 695
           ||||||||||| ||||||||| |||||||| ||||||||||| |||||||||||||| ||
Sbjct: 724 ccgatcacttctaacatcaagggcaacaaaaggaattaaccgctctgacaggagttgcgc 783

                        
Query: 696 gatgatctgccca 708
            | ||||||||||
Sbjct: 784 aacgatctgccca 796



to top

>dbj|AK103142.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033120G14, full
            insert sequence
          Length = 1306

 Score =  420 bits (212), Expect = e-114
 Identities = 293/320 (91%)
 Strand = Plus / Minus

                                                                        
Query: 389  cagggacaaccgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtg 448
            ||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||| |
Sbjct: 1306 cagggacaaccgctgttgcaccagctttctccaagttaacaccatgatccacatcatgcg 1247

                                                                        
Query: 449  ctctgacaaatgtcttcacatttggaaagtatttgctcagagcccatacagctctataat 508
            ||| ||| |||||||||||||||||||| |||||||||| |||||| |||||||||||||
Sbjct: 1246 ctcggacgaatgtcttcacatttggaaaatatttgctcaaagcccagacagctctataat 1187

                                                                        
Query: 509  ttgcaccaggagtatctaaagtaatggcagcagcacatgccctctcagctccaactttgt 568
            |||||||||| |||||||||||||| ||||| || || ||||||||||| ||||||||||
Sbjct: 1186 ttgcaccaggggtatctaaagtaatagcagctgcgcaggccctctcagccccaactttgt 1127

                                                                        
Query: 569  gcagtacctctctgctccctgcatcaccgaaatatactggtaggtcaagtgcacgcccaa 628
            ||||||||||||| || |||||||| ||||||||||||||||||||||| || || ||||
Sbjct: 1126 gcagtacctctctacttcctgcatccccgaaatatactggtaggtcaagcgcgcgtccaa 1067

                                                                        
Query: 629  ctgctacccgatcacttcgaacatcaagcgcaacaaatggaattaaccgttctgacagga 688
            |||| ||||||||||||||||||||||| ||||||||||||||||| | |||||||||||
Sbjct: 1066 ctgccacccgatcacttcgaacatcaagtgcaacaaatggaattaatctttctgacagga 1007

                                
Query: 689  gttgggcgatgatctgccca 708
            |||| ||||| |||||||||
Sbjct: 1006 gttgtgcgattatctgccca 987



to top

>emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032F06,
              complete sequence
          Length = 148023

 Score =  240 bits (121), Expect = 5e-60
 Identities = 166/181 (91%)
 Strand = Plus / Plus

                                                                          
Query: 397    accgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctgaca 456
              ||||||| |||||||||||||||||| |||||||||||||| |||||||| |||| ||| 
Sbjct: 103287 accgctgttgcaccagctttctccaagttaacaccatgatccacatcatgcgctcggacg 103346

                                                                          
Query: 457    aatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgcacca 516
              |||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||
Sbjct: 103347 aatgtcttcacatttggaaaatatttgctcaaagcccagacagctctataatttgcacca 103406

                                                                          
Query: 517    ggagtatctaaagtaatggcagcagcacatgccctctcagctccaactttgtgcagtacc 576
              || |||||||||||||| ||||| || || ||||||||||| ||||||||||||||||||
Sbjct: 103407 ggggtatctaaagtaatagcagctgcgcaggccctctcagccccaactttgtgcagtacc 103466

               
Query: 577    t 577
              |
Sbjct: 103467 t 103467



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 52/54 (96%)
 Strand = Plus / Plus

                                                                    
Query: 346    gcaagaacagcagcagccaattggagacttggttctaaggtctcagggacaacc 399
              |||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 102617 gcaagaacagcagcagccaactggagacttggttccaaggtctcagggacaacc 102670



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 65/72 (90%)
 Strand = Plus / Plus

                                                                          
Query: 573    tacctctctgctccctgcatcaccgaaatatactggtaggtcaagtgcacgcccaactgc 632
              ||||||||| || |||||||| ||||||||||||||||||||||| || || ||||||||
Sbjct: 103536 tacctctctacttcctgcatccccgaaatatactggtaggtcaagcgcgcgtccaactgc 103595

                          
Query: 633    tacccgatcact 644
               |||||||||||
Sbjct: 103596 cacccgatcact 103607



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 56/61 (91%)
 Strand = Plus / Plus

                                                                          
Query: 643    cttcgaacatcaagcgcaacaaatggaattaaccgttctgacaggagttgggcgatgatc 702
              |||||||||||||| ||||||||||||||||| | ||||||||||||||| ||||| |||
Sbjct: 104156 cttcgaacatcaagtgcaacaaatggaattaatctttctgacaggagttgtgcgattatc 104215

               
Query: 703    t 703
              |
Sbjct: 104216 t 104216



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                          
Query: 261    acaaagctccgtgagttctgacaaatgacgattcctgaactcgttgatcgttgttgcaat 320
              ||||| ||| ||||| ||||||| |||||| ||||||||||| ||||  |||| ||||||
Sbjct: 102436 acaaacctctgtgagctctgacagatgacggttcctgaactcattgacagttgctgcaat 102495

                                   
Query: 321    ctcagacattggaagttttgc 341
              ||| |||||||| ||||||||
Sbjct: 102496 ctctgacattgggagttttgc 102516



to top

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  240 bits (121), Expect = 5e-60
 Identities = 166/181 (91%)
 Strand = Plus / Plus

                                                                            
Query: 397      accgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctgaca 456
                ||||||| |||||||||||||||||| |||||||||||||| |||||||| |||| ||| 
Sbjct: 34897174 accgctgttgcaccagctttctccaagttaacaccatgatccacatcatgcgctcggacg 34897233

                                                                            
Query: 457      aatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgcacca 516
                |||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||
Sbjct: 34897234 aatgtcttcacatttggaaaatatttgctcaaagcccagacagctctataatttgcacca 34897293

                                                                            
Query: 517      ggagtatctaaagtaatggcagcagcacatgccctctcagctccaactttgtgcagtacc 576
                || |||||||||||||| ||||| || || ||||||||||| ||||||||||||||||||
Sbjct: 34897294 ggggtatctaaagtaatagcagctgcgcaggccctctcagccccaactttgtgcagtacc 34897353

                 
Query: 577      t 577
                |
Sbjct: 34897354 t 34897354



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 52/54 (96%)
 Strand = Plus / Plus

                                                                      
Query: 346      gcaagaacagcagcagccaattggagacttggttctaaggtctcagggacaacc 399
                |||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 34896504 gcaagaacagcagcagccaactggagacttggttccaaggtctcagggacaacc 34896557



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 65/72 (90%)
 Strand = Plus / Plus

                                                                            
Query: 573      tacctctctgctccctgcatcaccgaaatatactggtaggtcaagtgcacgcccaactgc 632
                ||||||||| || |||||||| ||||||||||||||||||||||| || || ||||||||
Sbjct: 34897423 tacctctctacttcctgcatccccgaaatatactggtaggtcaagcgcgcgtccaactgc 34897482

                            
Query: 633      tacccgatcact 644
                 |||||||||||
Sbjct: 34897483 cacccgatcact 34897494



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 56/61 (91%)
 Strand = Plus / Plus

                                                                            
Query: 643      cttcgaacatcaagcgcaacaaatggaattaaccgttctgacaggagttgggcgatgatc 702
                |||||||||||||| ||||||||||||||||| | ||||||||||||||| ||||| |||
Sbjct: 34898043 cttcgaacatcaagtgcaacaaatggaattaatctttctgacaggagttgtgcgattatc 34898102

                 
Query: 703      t 703
                |
Sbjct: 34898103 t 34898103



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                            
Query: 261      acaaagctccgtgagttctgacaaatgacgattcctgaactcgttgatcgttgttgcaat 320
                ||||| ||| ||||| ||||||| |||||| ||||||||||| ||||  |||| ||||||
Sbjct: 34896323 acaaacctctgtgagctctgacagatgacggttcctgaactcattgacagttgctgcaat 34896382

                                     
Query: 321      ctcagacattggaagttttgc 341
                ||| |||||||| ||||||||
Sbjct: 34896383 ctctgacattgggagttttgc 34896403



to top

>emb|AL732352.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0124B04, complete
             sequence
          Length = 115564

 Score =  240 bits (121), Expect = 5e-60
 Identities = 166/181 (91%)
 Strand = Plus / Plus

                                                                         
Query: 397   accgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctgaca 456
             ||||||| |||||||||||||||||| |||||||||||||| |||||||| |||| ||| 
Sbjct: 76613 accgctgttgcaccagctttctccaagttaacaccatgatccacatcatgcgctcggacg 76672

                                                                         
Query: 457   aatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgcacca 516
             |||||||||||||||||||| |||||||||| |||||| |||||||||||||||||||||
Sbjct: 76673 aatgtcttcacatttggaaaatatttgctcaaagcccagacagctctataatttgcacca 76732

                                                                         
Query: 517   ggagtatctaaagtaatggcagcagcacatgccctctcagctccaactttgtgcagtacc 576
             || |||||||||||||| ||||| || || ||||||||||| ||||||||||||||||||
Sbjct: 76733 ggggtatctaaagtaatagcagctgcgcaggccctctcagccccaactttgtgcagtacc 76792

              
Query: 577   t 577
             |
Sbjct: 76793 t 76793



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 52/54 (96%)
 Strand = Plus / Plus

                                                                   
Query: 346   gcaagaacagcagcagccaattggagacttggttctaaggtctcagggacaacc 399
             |||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 75943 gcaagaacagcagcagccaactggagacttggttccaaggtctcagggacaacc 75996



 Score = 87.7 bits (44), Expect = 5e-14
 Identities = 65/72 (90%)
 Strand = Plus / Plus

                                                                         
Query: 573   tacctctctgctccctgcatcaccgaaatatactggtaggtcaagtgcacgcccaactgc 632
             ||||||||| || |||||||| ||||||||||||||||||||||| || || ||||||||
Sbjct: 76862 tacctctctacttcctgcatccccgaaatatactggtaggtcaagcgcgcgtccaactgc 76921

                         
Query: 633   tacccgatcact 644
              |||||||||||
Sbjct: 76922 cacccgatcact 76933



 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 56/61 (91%)
 Strand = Plus / Plus

                                                                         
Query: 643   cttcgaacatcaagcgcaacaaatggaattaaccgttctgacaggagttgggcgatgatc 702
             |||||||||||||| ||||||||||||||||| | ||||||||||||||| ||||| |||
Sbjct: 77446 cttcgaacatcaagtgcaacaaatggaattaatctttctgacaggagttgtgcgattatc 77505

              
Query: 703   t 703
             |
Sbjct: 77506 t 77506



 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 70/81 (86%)
 Strand = Plus / Plus

                                                                         
Query: 261   acaaagctccgtgagttctgacaaatgacgattcctgaactcgttgatcgttgttgcaat 320
             ||||| ||| ||||| ||||||| |||||| ||||||||||| ||||  |||| ||||||
Sbjct: 75762 acaaacctctgtgagctctgacagatgacggttcctgaactcattgacagttgctgcaat 75821

                                  
Query: 321   ctcagacattggaagttttgc 341
             ||| |||||||| ||||||||
Sbjct: 75822 ctctgacattgggagttttgc 75842



to top

>gb|AC123899.15| Medicago truncatula clone mth2-33n6, complete sequence
          Length = 127126

 Score =  121 bits (61), Expect = 3e-24
 Identities = 127/149 (85%)
 Strand = Plus / Minus

                                                                          
Query: 409    ccagctttctccaaattaacaccatgatcaacatcatgtgctctgacaaatgtcttcaca 468
              ||||| ||||| ||||| || ||||||||||| ||||| || |  ||||| |||||||||
Sbjct: 113720 ccagccttctctaaattcactccatgatcaacgtcatgggcgcgaacaaaagtcttcaca 113661

                                                                          
Query: 469    tttggaaagtatttgctcagagcccatacagctctataatttgcaccaggagtatctaaa 528
              ||||| ||||| || ||||||||||| || | |||||||||||| ||||| ||||||| |
Sbjct: 113660 tttgggaagtacttactcagagcccaaactgttctataatttgctccaggcgtatctaga 113601

                                           
Query: 529    gtaatggcagcagcacatgccctctcagc 557
              ||||| || |||||||||||||| |||||
Sbjct: 113600 gtaatagctgcagcacatgccctttcagc 113572



to top

>gb|AC148817.3| Medicago truncatula chromosome 7 BAC clone mth2-22c10, complete
            sequence
          Length = 123020

 Score =  121 bits (61), Expect = 3e-24
 Identities = 127/149 (85%)
 Strand = Plus / Minus

                                                                        
Query: 409  ccagctttctccaaattaacaccatgatcaacatcatgtgctctgacaaatgtcttcaca 468
            ||||| ||||| ||||| || ||||||||||| ||||| || |  ||||| |||||||||
Sbjct: 5917 ccagccttctctaaattcactccatgatcaacgtcatgggcgcgaacaaaagtcttcaca 5858

                                                                        
Query: 469  tttggaaagtatttgctcagagcccatacagctctataatttgcaccaggagtatctaaa 528
            ||||| ||||| || ||||||||||| || | |||||||||||| ||||| ||||||| |
Sbjct: 5857 tttgggaagtacttactcagagcccaaactgttctataatttgctccaggcgtatctaga 5798

                                         
Query: 529  gtaatggcagcagcacatgccctctcagc 557
            ||||| || |||||||||||||| |||||
Sbjct: 5797 gtaatagctgcagcacatgccctttcagc 5769



to top

>ref|NM_116288.2| Arabidopsis thaliana KEA2; potassium:hydrogen antiporter AT4G00630
            (KEA2) mRNA, complete cds
          Length = 1884

 Score =  117 bits (59), Expect = 5e-23
 Identities = 311/395 (78%)
 Strand = Plus / Minus

                                                                        
Query: 274  agttctgacaaatgacgattcctgaactcgttgatcgttgttgcaatctcagacattgga 333
            ||||| ||||| ||||||   ||||||||||||||||||||||| || || ||  | || 
Sbjct: 1751 agttcagacaagtgacgagatctgaactcgttgatcgttgttgctatttctgatgtaggt 1692

                                                                        
Query: 334  agttttgcttgagcaagaacagcagcagccaattggagacttggttctaaggtctcaggg 393
            | ||| || || |||||||||||||| || || || ||||||||||| |  |||||||| 
Sbjct: 1691 aatttggcctgtgcaagaacagcagctgctaactgaagacttggttccagcgtctcagga 1632

                                                                        
Query: 394  acaaccgctgatgcaccagctttctccaaattaacaccatgatcaacatcatgtgctctg 453
            ||||| || |  || || ||||| || | ||| | |||||||||||| |||||||| | |
Sbjct: 1631 acaacagcggtagcgccggctttttcaagattgagaccatgatcaacgtcatgtgcacgg 1572

                                                                        
Query: 454  acaaatgtcttcacatttggaaagtatttgctcagagcccatacagctctataatttgca 513
            ||||| || || ||||| || || |||||||| |||||||| |||   || |||||||| 
Sbjct: 1571 acaaaggttttgacattggggaaatatttgctaagagcccagacacacctgtaatttgct 1512

                                                                        
Query: 514  ccaggagtatctaaagtaatggcagcagcacatgccctctcagctccaactttgtgcagt 573
            ||||| || ||||||| ||| || ||||||||||| || || || || | |||||| |||
Sbjct: 1511 ccaggtgtgtctaaagcaatagccgcagcacatgctctatctgccccgattttgtggagt 1452

                                                                        
Query: 574  acctctctgctccctgcatcaccgaaatatactggtaggtcaagtgcacgcccaactgct 633
            |||||||| || || || || || ||||| ||||| || || || | ||| |||| ||||
Sbjct: 1451 acctctctactaccagcgtctccaaaataaactggaagatctagggaacgaccaattgct 1392

                                               
Query: 634  acccgatcacttcgaacatcaagcgcaacaaatgg 668
            || | |||||| |  ||||| || |||||||||||
Sbjct: 1391 actctatcactgctgacatcgagggcaacaaatgg 1357



to top

>dbj|AP006402.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT34J23, TM0284,
             complete sequence
          Length = 92675

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 123/148 (83%)
 Strand = Plus / Plus

                                                                         
Query: 430   ccatgatcaacatcatgtgctctgacaaatgtcttcacatttggaaagtatttgctcaga 489
             ||||||||||| ||||| || |  ||||| ||||||||||| || ||||| ||||| |||
Sbjct: 56792 ccatgatcaacgtcatgggcacgaacaaaagtcttcacattagggaagtacttgctaaga 56851

                                                                         
Query: 490   gcccatacagctctataatttgcaccaggagtatctaaagtaatggcagcagcacatgcc 549
             ||||| || | |||||||||||| || || ||||||| ||| || || ||||||||||||
Sbjct: 56852 gcccaaactgttctataatttgctcccggcgtatctagagttattgctgcagcacatgcc 56911

                                         
Query: 550   ctctcagctccaactttgtgcagtacct 577
             || ||||| ||||  ||||| |||||||
Sbjct: 56912 ctttcagccccaatcttgtgtagtacct 56939



to top

>emb|AL161472.2|ATCHRIV2 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 2
          Length = 197975

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 121/149 (81%)
 Strand = Plus / Plus

                                                                         
Query: 429   accatgatcaacatcatgtgctctgacaaatgtcttcacatttggaaagtatttgctcag 488
             |||||||||||| |||||||| | |||||| || || ||||| || || |||||||| ||
Sbjct: 68879 accatgatcaacgtcatgtgcacggacaaaggttttgacattggggaaatatttgctaag 68938

                                                                         
Query: 489   agcccatacagctctataatttgcaccaggagtatctaaagtaatggcagcagcacatgc 548
             |||||| |||   || |||||||| ||||| || ||||||| ||| || |||||||||||
Sbjct: 68939 agcccagacacacctgtaatttgctccaggtgtgtctaaagcaatagccgcagcacatgc 68998

                                          
Query: 549   cctctcagctccaactttgtgcagtacct 577
              || || || || | |||||| |||||||
Sbjct: 68999 tctatctgccccgattttgtggagtacct 69027



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 274   agttctgacaaatgacgattcctgaactcgttgatcgttgttgc 317
             ||||| ||||| ||||||   |||||||||||||||||||||||
Sbjct: 68548 agttcagacaagtgacgagatctgaactcgttgatcgttgttgc 68591



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                   
Query: 346   gcaagaacagcagcagccaattggagacttggttctaaggtctcagggacaacc 399
             |||||||||||||| || || || ||||||||||| |  |||||||| ||||||
Sbjct: 68703 gcaagaacagcagctgctaactgaagacttggttccagcgtctcaggaacaacc 68756



to top

>gb|AF058919.2|F6N23 Arabidopsis thaliana BAC F6N23
          Length = 91849

 Score = 73.8 bits (37), Expect = 7e-10
 Identities = 121/149 (81%)
 Strand = Plus / Plus

                                                                         
Query: 429   accatgatcaacatcatgtgctctgacaaatgtcttcacatttggaaagtatttgctcag 488
             |||||||||||| |||||||| | |||||| || || ||||| || || |||||||| ||
Sbjct: 50005 accatgatcaacgtcatgtgcacggacaaaggttttgacattggggaaatatttgctaag 50064

                                                                         
Query: 489   agcccatacagctctataatttgcaccaggagtatctaaagtaatggcagcagcacatgc 548
             |||||| |||   || |||||||| ||||| || ||||||| ||| || |||||||||||
Sbjct: 50065 agcccagacacacctgtaatttgctccaggtgtgtctaaagcaatagccgcagcacatgc 50124

                                          
Query: 549   cctctcagctccaactttgtgcagtacct 577
              || || || || | |||||| |||||||
Sbjct: 50125 tctatctgccccgattttgtggagtacct 50153



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 274   agttctgacaaatgacgattcctgaactcgttgatcgttgttgc 317
             ||||| ||||| ||||||   |||||||||||||||||||||||
Sbjct: 49674 agttcagacaagtgacgagatctgaactcgttgatcgttgttgc 49717



 Score = 44.1 bits (22), Expect = 0.62
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                   
Query: 346   gcaagaacagcagcagccaattggagacttggttctaaggtctcagggacaacc 399
             |||||||||||||| || || || ||||||||||| |  |||||||| ||||||
Sbjct: 49829 gcaagaacagcagctgctaactgaagacttggttccagcgtctcaggaacaacc 49882



to top

>ref|NM_100062.2| Arabidopsis thaliana KEA1 (K EFFLUX ANTIPORTER 1); potassium:hydrogen
            antiporter AT1G01790 (KEA1) mRNA, complete cds
          Length = 2385

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 244/315 (77%)
 Strand = Plus / Minus

                                                                        
Query: 265  agctccgtgagttctgacaaatgacgattcctgaactcgttgatcgttgttgcaatctca 324
            ||||| || ||||| ||||| |||||  | ||||||||||| |||||  ||||||| || 
Sbjct: 2044 agctcggtcagttcagacaagtgacgggttctgaactcgttaatcgtgtttgcaatttcc 1985

                                                                        
Query: 325  gacattggaagttttgcttgagcaagaacagcagcagccaattggagacttggttctaag 384
            ||  | || | |||||| ||||||||||||||||| ||||| || ||||| || || |  
Sbjct: 1984 gatgtcggtaattttgcctgagcaagaacagcagctgccaactgtagactaggctccaga 1925

                                                                        
Query: 385  gtctcagggacaaccgctgatgcaccagctttctccaaattaacaccatgatcaacatca 444
            ||||| |||||||| || |  ||||| ||||| || | ||||| ||||||| ||||||| 
Sbjct: 1924 gtctccgggacaactgcagtagcaccggctttttctagattaagaccatgaacaacatcg 1865

                                                                        
Query: 445  tgtgctctgacaaatgtcttcacatttggaaagtatttgctcagagcccatacagctcta 504
            || || | |||||| || || ||||| ||  |  | ||||||| |||||| |||  ||| 
Sbjct: 1864 tgagcacggacaaaagttttgacattggggtaaaacttgctcaaagcccaaacacatctg 1805

                                                                        
Query: 505  taatttgcaccaggagtatctaaagtaatggcagcagcacatgccctctcagctccaact 564
            || ||||| || || |  ||||| | ||   ||||||||||||| ||| ||||||||| |
Sbjct: 1804 tagtttgctcctggtgcgtctaaggcaaccacagcagcacatgctctcccagctccaatt 1745

                           
Query: 565  ttgtgcagtacctct 579
            ||||| || ||||||
Sbjct: 1744 ttgtggagaacctct 1730



to top

>gb|AF003382.1|AF003382 Arabidopsis thaliana K efflux antiporter KEA1 mRNA, complete cds
          Length = 2350

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 244/315 (77%)
 Strand = Plus / Minus

                                                                        
Query: 265  agctccgtgagttctgacaaatgacgattcctgaactcgttgatcgttgttgcaatctca 324
            ||||| || ||||| ||||| |||||  | ||||||||||| |||||  ||||||| || 
Sbjct: 2044 agctcggtcagttcagacaagtgacgggttctgaactcgttaatcgtgtttgcaatttcc 1985

                                                                        
Query: 325  gacattggaagttttgcttgagcaagaacagcagcagccaattggagacttggttctaag 384
            ||  | || | |||||| ||||||||||||||||| ||||| || ||||| || || |  
Sbjct: 1984 gatgtcggtaattttgcctgagcaagaacagcagctgccaactgtagactaggctccaga 1925

                                                                        
Query: 385  gtctcagggacaaccgctgatgcaccagctttctccaaattaacaccatgatcaacatca 444
            ||||| |||||||| || |  ||||| ||||| || | ||||| ||||||| ||||||| 
Sbjct: 1924 gtctccgggacaactgcagtagcaccggctttttctagattaagaccatgaacaacatcg 1865

                                                                        
Query: 445  tgtgctctgacaaatgtcttcacatttggaaagtatttgctcagagcccatacagctcta 504
            || || | |||||| || || ||||| ||  |  | ||||||| |||||| |||  ||| 
Sbjct: 1864 tgagcacggacaaaagttttgacattggggtaaaacttgctcaaagcccaaacacatctg 1805

                                                                        
Query: 505  taatttgcaccaggagtatctaaagtaatggcagcagcacatgccctctcagctccaact 564
            || ||||| || || |  ||||| | ||   ||||||||||||| ||| ||||||||| |
Sbjct: 1804 tagtttgctcctggtgcgtctaaggcaaccacagcagcacatgctctcccagctccaatt 1745

                           
Query: 565  ttgtgcagtacctct 579
            ||||| || ||||||
Sbjct: 1744 ttgtggagaacctct 1730



to top

>gb|M25090.1|RABUTERG1 Oryctolagus cuniculus uteroglobin (UGL) gene, exon 1
          Length = 2161

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 351  aacagcagcagccaattggagacttg 376
            |||||||||||||| |||||||||||
Sbjct: 1089 aacagcagcagccacttggagacttg 1064



to top

>gb|AC009273.2|T1N6 Sequence of BAC T1N6 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 76175

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 536   cagcagcacatgccctctcagctccaactttgtg 569
             ||||||||||||| ||| ||||||||| ||||||
Sbjct: 61385 cagcagcacatgctctcccagctccaattttgtg 61352



 Score = 42.1 bits (21), Expect = 2.5
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                      
Query: 343   tgagcaagaacagcagcagccaattggagacttggttctaaggtctcagggacaacc 399
             ||||||||||||||||| ||||| || ||||| || || |  ||||| |||||||||
Sbjct: 61670 tgagcaagaacagcagctgccaactgtagactaggctccagagtctccgggacaacc 61614



to top

>emb|X01423.1|OCUTGLOB Rabbit uteroglobin gene
          Length = 6568

 Score = 44.1 bits (22), Expect = 0.62
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 351  aacagcagcagccaattggagacttg 376
            |||||||||||||| |||||||||||
Sbjct: 3945 aacagcagcagccacttggagacttg 3920



to top

>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 178     tcgctctcgtcgtcggagacc 198
               |||||||||||||||||||||
Sbjct: 2819784 tcgctctcgtcgtcggagacc 2819764



to top

>ref|XM_428870.1| PREDICTED: Gallus gallus LOC431319 (LOC431319), mRNA
          Length = 663

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 232 ccatagcccagggagctccca 252
           |||||||||||||||||||||
Sbjct: 335 ccatagcccagggagctccca 315



to top

>emb|BX908798.1| Parachlamydia-related symbiont UWE25, complete genome
          Length = 2414465

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 332     gaagttttgcttgagcaagaa 352
               |||||||||||||||||||||
Sbjct: 2001471 gaagttttgcttgagcaagaa 2001491



to top

>emb|CR406592.1| Gallus gallus finished cDNA, clone ChEST657j15
          Length = 1160

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 338 ttgcttgagcaagaacagcagcagc 362
           ||||||||||||||| |||||||||
Sbjct: 530 ttgcttgagcaagaaaagcagcagc 554



to top

>dbj|AP001875.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2307G24, complete
             sequence
          Length = 34000

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 338   ttgcttgagcaagaacagcagcagc 362
             |||||||||||| ||||||||||||
Sbjct: 16593 ttgcttgagcaataacagcagcagc 16569



to top

>emb|CR933780.12| Zebrafish DNA sequence from clone DKEY-60F6 in linkage group 5, complete
              sequence
          Length = 227454

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 539    cagcacatgccctctcagctccaac 563
              ||||| |||||||||||||||||||
Sbjct: 161466 cagcagatgccctctcagctccaac 161442



to top

>gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete genome
          Length = 1913428

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 339     tgcttgagcaagaacagcagcagc 362
               ||||||||||||||| ||||||||
Sbjct: 1136447 tgcttgagcaagaacggcagcagc 1136470



to top

>gb|AC122354.4| Mus musculus BAC clone RP23-401A2 from chromosome 12, complete sequence
          Length = 192581

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 348   aagaacagcagcagccaattggag 371
             ||||||||||||||||||| ||||
Sbjct: 45909 aagaacagcagcagccaatgggag 45886



to top

>gb|AC090821.13| Homo sapiens chromosome 8, clone CTD-2309H9, complete sequence
          Length = 166843

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    atggaagagctgaaatgttg 38
             ||||||||||||||||||||
Sbjct: 80122 atggaagagctgaaatgttg 80103



to top

>gb|U50068.2| Caenorhabditis elegans cosmid C01G5, complete sequence
          Length = 38627

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 334   agttttgcttgagcaagaac 353
             ||||||||||||||||||||
Sbjct: 25164 agttttgcttgagcaagaac 25145



to top

>gb|AC143341.8| Medicago truncatula clone mth2-7a11, complete sequence
          Length = 111446

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 494   atacagctctataatttgca 513
             ||||||||||||||||||||
Sbjct: 67490 atacagctctataatttgca 67471



to top

>emb|CR855865.5| Zebrafish DNA sequence from clone DKEY-267L2 in linkage group 3,
             complete sequence
          Length = 149895

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 655   agcgcaacaaatggaattaa 674
             ||||||||||||||||||||
Sbjct: 86548 agcgcaacaaatggaattaa 86529



to top

>emb|AL139349.36| Human DNA sequence from clone RP11-261P9 on chromosome 20 Contains the
             3' end of the STX16 gene for syntaxin 16, the NPEPL1 gene
             for aminopeptidase-like 1 and one CpG island, complete
             sequence
          Length = 68743

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 314   ttgcaatctcagacattgga 333
             ||||||||||||||||||||
Sbjct: 36092 ttgcaatctcagacattgga 36111



to top

>emb|AL138823.14| Human DNA sequence from clone RP11-64J21 on chromosome 13 Contains part
              of a novel gene similar to tumour-associated hydroquinone
              (NADH) oxidase TNOX, a ribosomal protein L36 (RPL36)
              pseudogene and a CpG island, complete sequence
          Length = 175112

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 268    tccgtgagttctgacaaatg 287
              ||||||||||||||||||||
Sbjct: 171395 tccgtgagttctgacaaatg 171376



to top

>emb|BX901909.5| Zebrafish DNA sequence from clone CH211-42I14 in linkage group 3,
             complete sequence
          Length = 90216

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 655   agcgcaacaaatggaattaa 674
             ||||||||||||||||||||
Sbjct: 32474 agcgcaacaaatggaattaa 32455



to top

>emb|AL596255.17| Mouse DNA sequence from clone RP23-6K20 on chromosome 11 Contains the
             3' end of the Myh13 gene for skeletal muscle myosin heavy
             polypeptide 13, the 5' end of the Gas7 gene for growth
             arrest specific 7, a novel gene and a CpG island, complete
             sequence
          Length = 251096

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 342   ttgagcaagaacagcagcagccaa 365
             |||||||||||||||||| |||||
Sbjct: 59681 ttgagcaagaacagcagctgccaa 59704



to top

>emb|BX004866.22| Mouse DNA sequence from clone RP23-360A7 on chromosome 4 Contains a
             ribosomal protein 7a (Rpl7a) pseudogene, complete sequence
          Length = 161600

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 450   tctgacaaatgtcttcacat 469
             ||||||||||||||||||||
Sbjct: 27418 tctgacaaatgtcttcacat 27437



to top

>ref|NM_068595.1| Caenorhabditis elegans C01G5.3 (C01G5.3) mRNA, complete cds
          Length = 1440

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 334  agttttgcttgagcaagaac 353
            ||||||||||||||||||||
Sbjct: 1434 agttttgcttgagcaagaac 1415



to top

>gb|AC154576.2| Mus musculus BAC clone RP23-372B6 from chromosome 14, complete sequence
          Length = 152380

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 3      atgtcctacctaccaaatgg 22
              ||||||||||||||||||||
Sbjct: 114722 atgtcctacctaccaaatgg 114703



to top

>emb|BX322570.4| Zebrafish DNA sequence from clone DKEY-27H10 in linkage group 1,
             complete sequence
          Length = 185032

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    agctgaaatgttgccaaaga 45
             ||||||||||||||||||||
Sbjct: 58010 agctgaaatgttgccaaaga 58029



to top

>emb|AL844217.7| Zebrafish DNA sequence from clone DKEY-218L17, complete sequence
          Length = 246026

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    agctgaaatgttgccaaaga 45
             ||||||||||||||||||||
Sbjct: 22053 agctgaaatgttgccaaaga 22072



to top

>emb|BX927169.7| Zebrafish DNA sequence from clone DKEY-115P24 in linkage group 18,
             complete sequence
          Length = 29649

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 431   catgatcaacatcatgtgct 450
             ||||||||||||||||||||
Sbjct: 10363 catgatcaacatcatgtgct 10382



to top

>emb|AL591669.5| Zebrafish DNA sequence from clone BUSM1-163L24 in linkage group 3,
             complete sequence
          Length = 107839

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 655   agcgcaacaaatggaattaa 674
             ||||||||||||||||||||
Sbjct: 62208 agcgcaacaaatggaattaa 62189



to top

>gb|AY110567.1| Zea mays CL7839_1 mRNA sequence
          Length = 1734

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 250  ccacttgtagaacaaagctc 269
            ||||||||||||||||||||
Sbjct: 1612 ccacttgtagaacaaagctc 1593



to top

>gb|AC172989.2| Mus musculus BAC clone RP24-556J6 from chromosome 15, complete sequence
          Length = 184996

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 229    aagccatagcccagggagctccca 252
              |||||||| |||||||||||||||
Sbjct: 161496 aagccataccccagggagctccca 161519



to top

>gb|AC167818.4| Mus musculus BAC clone RP23-120O24 from chromosome 15, complete sequence
          Length = 203474

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 229    aagccatagcccagggagctccca 252
              |||||||| |||||||||||||||
Sbjct: 126055 aagccataccccagggagctccca 126078



to top

>emb|CR974587.14| Pig DNA sequence from clone CH242-288P9 on chromosome 7, complete
              sequence
          Length = 165092

 Score = 40.1 bits (20), Expect = 9.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 239    ccagggagctcccacttgta 258
              ||||||||||||||||||||
Sbjct: 116238 ccagggagctcccacttgta 116219


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,049,683
Number of Sequences: 3902068
Number of extensions: 6049683
Number of successful extensions: 117585
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117391
Number of HSP's gapped (non-prelim): 191
length of query: 708
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 685
effective length of database: 17,143,297,704
effective search space: 11743158927240
effective search space used: 11743158927240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top