| Clone Name | rbags16d12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009114.1| Triticum aestivum clone wl1.pk0012.c2:fis, full insert mRNA sequence Length = 1264 Score = 791 bits (399), Expect = 0.0 Identities = 425/434 (97%) Strand = Plus / Minus Query: 182 gctggtgctcagatatgatcgcaaactacttttgtgtagtctgatgttgatgacttccca 241 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1016 gctggtgctcagatatgatcgcaaactgcttttgtgtagtctgatgttgatgacttccca 957 Query: 242 ccaagatcagcggttctgtacttcccctcggcgattgtctggaggatggcattgtggatc 301 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 956 ccaagatcagcggttctgtacttcccctcggcaattgtctggaggatggcattgtggatc 897 Query: 302 cggtctgcttggtcgttgaattgcaagtgacgcaacatcataacagcactcaacataaga 361 |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 896 cggtctgcttggtcattgaattgcaagtggcgcaacatcataacagcactcaacataaga 837 Query: 362 gcagttgggtttgcaaggttcttgccagagatatcaggtgcagaaccatgaacagcctct 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 836 gcagttgggtttgcaaggttcttgccagagatatcaggtgcagaaccatgaacagcctct 777 Query: 422 gccagacaaatgccaccttcaccaatgttgcagctgggagttaagcccaagcctccgatc 481 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 776 gccagacaaatgccaccttcaccaatgttgcagctgggagttaagcccaatcctccgatc 717 Query: 482 aaaccagcacatagatcactaataatgtcaccatacagatttggcatcactaatacatca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 aaaccagcacatagatcactaataatgtcaccatacagatttggcatcactaatacatca 657 Query: 542 aatgtaccaggattctttacnagcgtcatgcagcaattgtcaataatgacttcctcgtat 601 ||||||||||||||||| || || |||||||||||||||||||||||||||||||| ||| Sbjct: 656 aatgtaccaggattcttcacgagtgtcatgcagcaattgtcaataatgacttcctcatat 597 Query: 602 gtgatttcagggta 615 |||||||||||||| Sbjct: 596 gtgatttcagggta 583 Score = 111 bits (56), Expect = 3e-21 Identities = 135/159 (84%), Gaps = 4/159 (2%) Strand = Plus / Minus Query: 1 gattcttangcttgactgcantgactggtaaaactttttnaggancaagcaatgtgagga 60 ||||||| ||||||||||| || |||||||||||||| | | |||| |||| ||| | Sbjct: 1204 gattcttcagcttgactgcaatg-ctggtaaaacttttccaaggacaag-aatgcgagaa 1147 Query: 61 ttattcaggagtcttaaacggggtc--aacacccaaggaaattgaggtgtccgtcactta 118 ||||||||||| |||||| || ||| ||||||||||||||| |||||| | | |||||| Sbjct: 1146 ttattcaggagccttaaatggtgtcttaacacccaaggaaatcgaggtgcctgccactta 1087 Query: 119 acctactccggctaaagctcctgccatgcaacaaaatta 157 |||||||| |||||||||||||| |||||||||||||| Sbjct: 1086 acctactcaggctaaagctcctggtatgcaacaaaatta 1048
>gb|BT009215.1| Triticum aestivum clone wle1n.pk0059.e6:fis, full insert mRNA sequence Length = 1514 Score = 783 bits (395), Expect = 0.0 Identities = 424/434 (97%) Strand = Plus / Minus Query: 182 gctggtgctcagatatgatcgcaaactacttttgtgtagtctgatgttgatgacttccca 241 ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 1251 gctggtgctcagatatgatcgcaaactgcttttgtgtagtctgacgttgatgacttccca 1192 Query: 242 ccaagatcagcggttctgtacttcccctcggcgattgtctggaggatggcattgtggatc 301 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1191 ccaagatcagcggttctgtacttcccctcggcaattgtctggaggatggcattgtggatc 1132 Query: 302 cggtctgcttggtcgttgaattgcaagtgacgcaacatcataacagcactcaacataaga 361 |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1131 cggtctgcttggtcattgaattgcaagtggcgcaacatcataacagcactcaacataaga 1072 Query: 362 gcagttgggtttgcaaggttcttgccagagatatcaggtgcagaaccatgaacagcctct 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1071 gcagttgggtttgcaaggttcttgccagagatatcaggtgcagaaccatgaacagcctct 1012 Query: 422 gccagacaaatgccaccttcaccaatgttgcagctgggagttaagcccaagcctccgatc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1011 gccagacaaatgccaccttcaccaatgttgcagctgggagttaagcccaagcctccaatc 952 Query: 482 aaaccagcacatagatcactaataatgtcaccatacagatttggcatcactaatacatca 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 951 aaaccagcacatagatcactaataatgtcaccatacagatttggcatcactaatacatca 892 Query: 542 aatgtaccaggattctttacnagcgtcatgcagcaattgtcaataatgacttcctcgtat 601 ||||||||||||||||| || || |||||||||||||||||||||||||||||||| ||| Sbjct: 891 aatgtaccaggattcttcacgagtgtcatgcagcaattgtcaataatgacttcctcatat 832 Query: 602 gtgatttcagggta 615 |||||||||||||| Sbjct: 831 gtgatttcagggta 818 Score = 103 bits (52), Expect = 7e-19 Identities = 135/159 (84%), Gaps = 5/159 (3%) Strand = Plus / Minus Query: 1 gattcttangcttgactgcantgactggtaaaactttttnaggancaagcaatgtgagga 60 ||||||| ||||||||||| || |||||||||||||| | | |||| |||| ||||| Sbjct: 1438 gattcttcagcttgactgcaatg-ctggtaaaacttttccaaggacaag-aatgcgagga 1381 Query: 61 ttattcaggagtcttaaacgggg--tcaacacccaaggaaattgaggtgtccgtcactta 118 ||||||||||| ||||||||| | ||||||||||||||||| |||||| | | ||||| Sbjct: 1380 ttattcaggagccttaaacggtgtctcaacacccaaggaaatcgaggtgcctgccactt- 1322 Query: 119 acctactccggctaaagctcctgccatgcaacaaaatta 157 |||||||| |||||||||||| | |||||||||||||| Sbjct: 1321 acctactcaggctaaagctcccggtatgcaacaaaatta 1283
>ref|NM_188089.1| Oryza sativa (japonica cultivar-group), Ozsa8521 predicted mRNA Length = 1089 Score = 434 bits (219), Expect = e-118 Identities = 374/426 (87%) Strand = Plus / Minus Query: 190 tcagatatgatcgcaaactacttttgtgtagtctgatgttgatgacttcccaccaagatc 249 |||||||||||| || ||| | || ||| ||||||| || || | ||| || || ||||| Sbjct: 1089 tcagatatgatcacagactgccttcgtgaagtctgaagtcgacgcctttccgccgagatc 1030 Query: 250 agcggttctgtacttcccctcggcgattgtctggaggatggcattgtggatccggtctgc 309 ||| || ||| | |||||||||| ||| |||||||||||||| ||||||||||||||||| Sbjct: 1029 agcagtcctgaatttcccctcggagatggtctggaggatggcgttgtggatccggtctgc 970 Query: 310 ttggtcgttgaattgcaagtgacgcaacatcataacagcactcaacataagagcagttgg 369 ||||| |||||||||||||| |||||||||||||||||||||| ||||||||| || || Sbjct: 969 ttggttattgaattgcaagtggcgcaacatcataacagcactcagcataagagcggtcgg 910 Query: 370 gtttgcaaggttcttgccagagatatcaggtgcagaaccatgaacagcctctgccagaca 429 |||||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||| Sbjct: 909 gtttgcaaggttcttgccagcaatatcaggagcagaaccgtgaacagcttctgccagaca 850 Query: 430 aatgccaccttcaccaatgttgcagctgggagttaagcccaagcctccgatcaaaccagc 489 |||||||||||||||||||||||||||||| || |||||||||||||| |||| |||||| Sbjct: 849 aatgccaccttcaccaatgttgcagctgggtgtcaagcccaagcctccaatcagaccagc 790 Query: 490 acatagatcactaataatgtcaccatacagatttggcatcactaatacatcaaatgtacc 549 ||| |||||||||||||| |||||||| |||||||||||||| | ||||||||| ||| Sbjct: 789 acaaagatcactaataatatcaccataaagatttggcatcaccagtacatcaaaaagacc 730 Query: 550 aggattctttacnagcgtcatgcagcaattgtcaataatgacttcctcgtatgtgatttc 609 ||||||||| || |||||||| || ||||||||||| ||||| ||||||||| ||||| Sbjct: 729 aggattcttcacaagcgtcatacaacaattgtcaatgatgacctcctcgtatacaatttc 670 Query: 610 agggta 615 |||||| Sbjct: 669 agggta 664
>dbj|AB189167.1| Oryza sativa (japonica cultivar-group) OsIDHa mRNA for NAD-dependent isocitrate dehydrogenase a, complete cds Length = 1424 Score = 434 bits (219), Expect = e-118 Identities = 374/426 (87%) Strand = Plus / Minus Query: 190 tcagatatgatcgcaaactacttttgtgtagtctgatgttgatgacttcccaccaagatc 249 |||||||||||| || ||| | || ||| ||||||| || || | ||| || || ||||| Sbjct: 1215 tcagatatgatcacagactgccttcgtgaagtctgaagtcgacgcctttccgccgagatc 1156 Query: 250 agcggttctgtacttcccctcggcgattgtctggaggatggcattgtggatccggtctgc 309 ||| || ||| | |||||||||| ||| |||||||||||||| ||||||||||||||||| Sbjct: 1155 agcagtcctgaatttcccctcggagatggtctggaggatggcgttgtggatccggtctgc 1096 Query: 310 ttggtcgttgaattgcaagtgacgcaacatcataacagcactcaacataagagcagttgg 369 ||||| |||||||||||||| |||||||||||||||||||||| ||||||||| || || Sbjct: 1095 ttggttattgaattgcaagtggcgcaacatcataacagcactcagcataagagcggtcgg 1036 Query: 370 gtttgcaaggttcttgccagagatatcaggtgcagaaccatgaacagcctctgccagaca 429 |||||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||| Sbjct: 1035 gtttgcaaggttcttgccagcaatatcaggagcagaaccgtgaacagcttctgccagaca 976 Query: 430 aatgccaccttcaccaatgttgcagctgggagttaagcccaagcctccgatcaaaccagc 489 |||||||||||||||||||||||||||||| || |||||||||||||| |||| |||||| Sbjct: 975 aatgccaccttcaccaatgttgcagctgggtgtcaagcccaagcctccaatcagaccagc 916 Query: 490 acatagatcactaataatgtcaccatacagatttggcatcactaatacatcaaatgtacc 549 ||| |||||||||||||| |||||||| |||||||||||||| | ||||||||| ||| Sbjct: 915 acaaagatcactaataatatcaccataaagatttggcatcaccagtacatcaaaaagacc 856 Query: 550 aggattctttacnagcgtcatgcagcaattgtcaataatgacttcctcgtatgtgatttc 609 ||||||||| || |||||||| || ||||||||||| ||||| ||||||||| ||||| Sbjct: 855 aggattcttcacaagcgtcatacaacaattgtcaatgatgacctcctcgtatacaatttc 796 Query: 610 agggta 615 |||||| Sbjct: 795 agggta 790
>dbj|AK059596.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-D11, full insert sequence Length = 1522 Score = 426 bits (215), Expect = e-116 Identities = 373/426 (87%) Strand = Plus / Minus Query: 190 tcagatatgatcgcaaactacttttgtgtagtctgatgttgatgacttcccaccaagatc 249 |||||||||||| || ||| | || ||| ||||||| || || | ||| || || ||||| Sbjct: 1229 tcagatatgatcacagactgccttcgtgaagtctgaagtcgacgcctttccgccgagatc 1170 Query: 250 agcggttctgtacttcccctcggcgattgtctggaggatggcattgtggatccggtctgc 309 ||| || ||| | |||||||||| ||| |||||||||||||| ||||||||||||||||| Sbjct: 1169 agcagtcctgaatttcccctcggagatggtctggaggatggcgttgtggatccggtctgc 1110 Query: 310 ttggtcgttgaattgcaagtgacgcaacatcataacagcactcaacataagagcagttgg 369 ||||| |||||||||||||| |||||||||||||||||||||| ||||||||| || || Sbjct: 1109 ttggttattgaattgcaagtggcgcaacatcataacagcactcagcataagagcggtcgg 1050 Query: 370 gtttgcaaggttcttgccagagatatcaggtgcagaaccatgaacagcctctgccagaca 429 |||||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||| Sbjct: 1049 gtttgcaaggttcttgccagcaatatcaggagcagaaccgtgaacagcttctgccagaca 990 Query: 430 aatgccaccttcaccaatgttgcagctgggagttaagcccaagcctccgatcaaaccagc 489 ||||||||| |||||||||||||||||||| || |||||||||||||| |||| |||||| Sbjct: 989 aatgccaccctcaccaatgttgcagctgggtgtcaagcccaagcctccaatcagaccagc 930 Query: 490 acatagatcactaataatgtcaccatacagatttggcatcactaatacatcaaatgtacc 549 ||| |||||||||||||| |||||||| |||||||||||||| | ||||||||| ||| Sbjct: 929 acaaagatcactaataatatcaccataaagatttggcatcaccagtacatcaaaaagacc 870 Query: 550 aggattctttacnagcgtcatgcagcaattgtcaataatgacttcctcgtatgtgatttc 609 ||||||||| || |||||||| || ||||||||||| ||||| ||||||||| ||||| Sbjct: 869 aggattcttcacaagcgtcatacaacaattgtcaatgatgacctcctcgtatacaatttc 810 Query: 610 agggta 615 |||||| Sbjct: 809 agggta 804
>gb|AY109823.1| Zea mays CL1046_1 mRNA sequence Length = 1535 Score = 396 bits (200), Expect = e-107 Identities = 309/349 (88%) Strand = Plus / Minus Query: 267 cctcggcgattgtctggaggatggcattgtggatccggtctgcttggtcgttgaattgca 326 |||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 1136 cctcggcgatggtctggaggatggcgttgtggatccggtctgctttgtcgttgaattgca 1077 Query: 327 agtgacgcaacatcataacagcactcaacataagagcagttgggtttgcaaggttcttgc 386 ||| ||||||| ||| |||||||||| |||||||||||| ||||| || |||||||||| Sbjct: 1076 tgtggcgcaacaacatgacagcactcagcataagagcagtcgggttcgcgaggttcttgc 1017 Query: 387 cagagatatcaggtgcagaaccatgaacagcctctgccagacaaatgccaccttcaccaa 446 ||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1016 cagcaatatcaggagcagaaccatgaacagcttctgccagacaaatgccaccttcaccaa 957 Query: 447 tgttgcagctgggagttaagcccaagcctccgatcaaaccagcacatagatcactaataa 506 | ||||| ||||| |||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 956 tattgcaactgggtgttaggcccaagnnnnngatcaaaccagcacatagatcactaataa 897 Query: 507 tgtcaccatacagatttggcatcactaatacatcaaatgtaccaggattctttacnagcg 566 |||||||||| ||||||||||||||||||||||| |||||||||||| || |||| Sbjct: 896 tgtcaccatagagatttggcatcactaatacatcnnnnngaccaggattcttcacaagcg 837 Query: 567 tcatgcagcaattgtcaataatgacttcctcgtatgtgatttcagggta 615 |||| || ||||||||||| ||||| ||||||||| ||||||||||| Sbjct: 836 tcatacaacaattgtcaatgatgacctcctcgtattgaatttcagggta 788
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 178 bits (90), Expect = 1e-41 Identities = 168/194 (86%) Strand = Plus / Minus Query: 190 tcagatatgatcgcaaactacttttgtgtagtctgatgttgatgacttcccaccaagatc 249 |||||||||||| || ||| | || ||| ||||||| || || | ||| || || ||||| Sbjct: 9668794 tcagatatgatcacagactgccttcgtgaagtctgaagtcgacgcctttccgccgagatc 9668735 Query: 250 agcggttctgtacttcccctcggcgattgtctggaggatggcattgtggatccggtctgc 309 ||| || ||| | |||||||||| ||| |||||||||||||| ||||||||||||||||| Sbjct: 9668734 agcagtcctgaatttcccctcggagatggtctggaggatggcgttgtggatccggtctgc 9668675 Query: 310 ttggtcgttgaattgcaagtgacgcaacatcataacagcactcaacataagagcagttgg 369 ||||| |||||||||||||| |||||||||||||||||||||| ||||||||| || || Sbjct: 9668674 ttggttattgaattgcaagtggcgcaacatcataacagcactcagcataagagcggtcgg 9668615 Query: 370 gtttgcaaggttct 383 |||||||||||||| Sbjct: 9668614 gtttgcaaggttct 9668601 Score = 119 bits (60), Expect = 1e-23 Identities = 75/80 (93%) Strand = Plus / Minus Query: 382 cttgccagagatatcaggtgcagaaccatgaacagcctctgccagacaaatgccaccttc 441 |||||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct: 9668217 cttgccagcaatatcaggagcagaaccgtgaacagcttctgccagacaaatgccaccttc 9668158 Query: 442 accaatgttgcagctgggag 461 |||||||||||||||||||| Sbjct: 9668157 accaatgttgcagctgggag 9668138 Score = 111 bits (56), Expect = 3e-21 Identities = 92/104 (88%) Strand = Plus / Minus Query: 455 ctgggagttaagcccaagcctccgatcaaaccagcacatagatcactaataatgtcacca 514 ||||| || |||||||||||||| |||| ||||||||| |||||||||||||| |||||| Sbjct: 9668066 ctgggtgtcaagcccaagcctccaatcagaccagcacaaagatcactaataatatcacca 9668007 Query: 515 tacagatttggcatcactaatacatcaaatgtaccaggattctt 558 || |||||||||||||| | ||||||||| |||||||||||| Sbjct: 9668006 taaagatttggcatcaccagtacatcaaaaagaccaggattctt 9667963 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 565 cgtcatgcagcaattgtcaataatgacttcctcgtatgtgatttcagggta 615 |||||| || ||||||||||| ||||| ||||||||| ||||||||||| Sbjct: 9667763 cgtcatacaacaattgtcaatgatgacctcctcgtatacaatttcagggta 9667713
>dbj|AP000836.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0038F12 Length = 190014 Score = 178 bits (90), Expect = 1e-41 Identities = 168/194 (86%) Strand = Plus / Minus Query: 190 tcagatatgatcgcaaactacttttgtgtagtctgatgttgatgacttcccaccaagatc 249 |||||||||||| || ||| | || ||| ||||||| || || | ||| || || ||||| Sbjct: 106797 tcagatatgatcacagactgccttcgtgaagtctgaagtcgacgcctttccgccgagatc 106738 Query: 250 agcggttctgtacttcccctcggcgattgtctggaggatggcattgtggatccggtctgc 309 ||| || ||| | |||||||||| ||| |||||||||||||| ||||||||||||||||| Sbjct: 106737 agcagtcctgaatttcccctcggagatggtctggaggatggcgttgtggatccggtctgc 106678 Query: 310 ttggtcgttgaattgcaagtgacgcaacatcataacagcactcaacataagagcagttgg 369 ||||| |||||||||||||| |||||||||||||||||||||| ||||||||| || || Sbjct: 106677 ttggttattgaattgcaagtggcgcaacatcataacagcactcagcataagagcggtcgg 106618 Query: 370 gtttgcaaggttct 383 |||||||||||||| Sbjct: 106617 gtttgcaaggttct 106604 Score = 119 bits (60), Expect = 1e-23 Identities = 75/80 (93%) Strand = Plus / Minus Query: 382 cttgccagagatatcaggtgcagaaccatgaacagcctctgccagacaaatgccaccttc 441 |||||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||| Sbjct: 106220 cttgccagcaatatcaggagcagaaccgtgaacagcttctgccagacaaatgccaccttc 106161 Query: 442 accaatgttgcagctgggag 461 |||||||||||||||||||| Sbjct: 106160 accaatgttgcagctgggag 106141 Score = 111 bits (56), Expect = 3e-21 Identities = 92/104 (88%) Strand = Plus / Minus Query: 455 ctgggagttaagcccaagcctccgatcaaaccagcacatagatcactaataatgtcacca 514 ||||| || |||||||||||||| |||| ||||||||| |||||||||||||| |||||| Sbjct: 106069 ctgggtgtcaagcccaagcctccaatcagaccagcacaaagatcactaataatatcacca 106010 Query: 515 tacagatttggcatcactaatacatcaaatgtaccaggattctt 558 || |||||||||||||| | ||||||||| |||||||||||| Sbjct: 106009 taaagatttggcatcaccagtacatcaaaaagaccaggattctt 105966 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 565 cgtcatgcagcaattgtcaataatgacttcctcgtatgtgatttcagggta 615 |||||| || ||||||||||| ||||| ||||||||| ||||||||||| Sbjct: 105766 cgtcatacaacaattgtcaatgatgacctcctcgtatacaatttcagggta 105716
>emb|X96727.1|NTNADI N.tabacum mRNA for NAD-dependent isocitrate dehydrogenase Length = 1468 Score = 111 bits (56), Expect = 3e-21 Identities = 155/188 (82%) Strand = Plus / Minus Query: 344 acagcactcaacataagagcagttgggtttgcaaggttcttgccagagatatcaggtgca 403 ||||||||||| | | ||||||||| ||||| | |||||| |||| ||||||||||| Sbjct: 1047 acagcactcaaaagcaaagcagttggatttgccaagttctttccagcaatatcaggtgct 988 Query: 404 gaaccatgaacagcctctgccagacaaatgccaccttcaccaatgttgcagctgggagtt 463 |||||||| |||||||| || ||| ||| || || |||||||| ||||| || |||||| Sbjct: 987 gaaccatgcacagcctcagcaagagcaatacctccctcaccaatattgcaacttggagtt 928 Query: 464 aagcccaagcctccgatcaaaccagcacatagatcactaataatgtcaccatacagattt 523 | |||||| || || |||| ||||||||| || ||||| |||||||||||||| || || Sbjct: 927 aggcccaaaccaccaatcacaccagcacaaaggtcactgataatgtcaccataaaggtta 868 Query: 524 ggcatcac 531 |||||||| Sbjct: 867 ggcatcac 860 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 239 ccaccaagatcagcggttctgtacttcccctcggcgattgt 279 |||||||||||| | |||| |||||||||||| || ||||| Sbjct: 1152 ccaccaagatcacctgttcggtacttcccctccgcaattgt 1112
>emb|X67310.1|TBBISODEH S.tuberosum mRNA for beta-isopropylmalate dehydrogenase Length = 1406 Score = 103 bits (52), Expect = 7e-19 Identities = 118/140 (84%) Strand = Plus / Minus Query: 392 atatcaggtgcagaaccatgaacagcctctgccagacaaatgccaccttcaccaatgttg 451 ||||||||||| |||||||| |||||||| || || ||| || || || ||||| ||| Sbjct: 954 atatcaggtgctgaaccatgcacagcctcagcaagggcaatacctccctcgccaatattg 895 Query: 452 cagctgggagttaagcccaagcctccgatcaaaccagcacatagatcactaataatgtca 511 || || |||||||||||||| || || |||||||||||||| |||||||| || |||||| Sbjct: 894 caacttggagttaagcccaaaccaccaatcaaaccagcacaaagatcactgattatgtca 835 Query: 512 ccatacagatttggcatcac 531 ||||| ||||| |||||||| Sbjct: 834 ccataaagattaggcatcac 815
>gb|AY389557.1| Hyacinthus orientalis isocitrate dehydrogenases (NAD) mRNA, partial cds Length = 652 Score = 101 bits (51), Expect = 3e-18 Identities = 195/243 (80%) Strand = Plus / Minus Query: 259 gtacttcccctcggcgattgtctggaggatggcattgtggatccggtctgcttggtcgtt 318 ||||||||| || ||||| |||| || || ||||| ||||||||||| |||| ||||| Sbjct: 256 gtacttcccttcagcgatggtcttaagaatcgcattttggatccggtcagctttatcgtt 197 Query: 319 gaattgcaagtgacgcaacatcataacagcactcaacataagagcagttgggtttgcaag 378 | |||||||| |||| |||||| || | ||||| | || || ||||| || || | Sbjct: 196 tagctgcaagtgtcgcagcatcatgacggaactcagtaggagggctgttggattcgccaa 137 Query: 379 gttcttgccagagatatcaggtgcagaaccatgaacagcctctgccagacaaatgccacc 438 |||||||||| |||||||| || |||||||| ||||| ||||||||||| ||||| || Sbjct: 136 attcttgccagcaatatcaggagccgaaccatgtacagcttctgccagacagatgcctcc 77 Query: 439 ttcaccaatgttgcagctgggagttaagcccaagcctccgatcaaaccagcacatagatc 498 ||||||||| ||||| || || || |||||||| || || ||||| ||||||||||| || Sbjct: 76 ttcaccaatattgcaactaggggtcaagcccaaaccaccaatcaacccagcacataggtc 17 Query: 499 act 501 ||| Sbjct: 16 act 14
>gb|BT014261.1| Lycopersicon esculentum clone 133481F, mRNA sequence Length = 1412 Score = 87.7 bits (44), Expect = 4e-14 Identities = 116/140 (82%) Strand = Plus / Minus Query: 392 atatcaggtgcagaaccatgaacagcctctgccagacaaatgccaccttcaccaatgttg 451 ||||||||||| |||||||| |||||||| || || ||| || || || ||||| ||| Sbjct: 903 atatcaggtgctgaaccatgcacagcctcagcaagggcaatacctccctcgccaatattg 844 Query: 452 cagctgggagttaagcccaagcctccgatcaaaccagcacatagatcactaataatgtca 511 || || |||||||||||||| || || |||||||||||||| || ||||| || |||||| Sbjct: 843 caacttggagttaagcccaaaccacctatcaaaccagcacaaaggtcactgattatgtca 784 Query: 512 ccatacagatttggcatcac 531 ||||| || || |||||||| Sbjct: 783 ccataaaggttaggcatcac 764
>ref|NM_120407.3| Arabidopsis thaliana isocitrate dehydrogenase (NAD+)/ oxidoreductase AT5G03290 mRNA, complete cds Length = 1240 Score = 73.8 bits (37), Expect = 6e-10 Identities = 139/173 (80%) Strand = Plus / Minus Query: 242 ccaagatcagcggttctgtacttcccctcggcgattgtctggaggatggcattgtggatc 301 |||||||| ||||||||||| || ||||| || || || | || ||| ||| ||||||| Sbjct: 1131 ccaagatccgcggttctgtatttgccctctgctatggtgttgatgattgcactgtggatt 1072 Query: 302 cggtctgcttggtcgttgaattgcaagtgacgcaacatcataacagcactcaacataaga 361 | |||||||| |||||||| | || ||||||||||||||| || |||||| | | Sbjct: 1071 tgttctgcttgttcgttgaacttcaggtgacgcaacatcatcactccactcagaagcaac 1012 Query: 362 gcagttgggtttgcaaggttcttgccagagatatcaggtgcagaaccatgaac 414 || |||||||| || | |||||| |||| |||||||||||||||||| ||||| Sbjct: 1011 gcggttgggttcgccaagttctttccagcgatatcaggtgcagaaccgtgaac 959 Score = 67.9 bits (34), Expect = 4e-08 Identities = 102/125 (81%) Strand = Plus / Minus Query: 488 gcacatagatcactaataatgtcaccatacagatttggcatcactaatacatcaaatgta 547 ||||| ||||| |||||||||||||| ||||| ||||||||||| || |||||||| Sbjct: 885 gcacacagatcgctaataatgtcaccgtacaggtttggcatcaccaagacatcaaaaagt 826 Query: 548 ccaggattctttacnagcgtcatgcagcaattgtcaataatgacttcctcgtatgtgatt 607 | || || || || ||| |||| ||||| |||||||||| ||| |||||||| ||||| Sbjct: 825 gctgggtttttcacaagcatcatacagcagttgtcaataacgacctcctcgtaagtgatc 766 Query: 608 tcagg 612 ||||| Sbjct: 765 tcagg 761
>gb|BT008460.1| Arabidopsis thaliana At5g03290 gene, complete cds Length = 1125 Score = 73.8 bits (37), Expect = 6e-10 Identities = 139/173 (80%) Strand = Plus / Minus Query: 242 ccaagatcagcggttctgtacttcccctcggcgattgtctggaggatggcattgtggatc 301 |||||||| ||||||||||| || ||||| || || || | || ||| ||| ||||||| Sbjct: 1073 ccaagatccgcggttctgtatttgccctctgctatggtgttgatgattgcactgtggatt 1014 Query: 302 cggtctgcttggtcgttgaattgcaagtgacgcaacatcataacagcactcaacataaga 361 | |||||||| |||||||| | || ||||||||||||||| || |||||| | | Sbjct: 1013 tgttctgcttgttcgttgaacttcaggtgacgcaacatcatcactccactcagaagcaac 954 Query: 362 gcagttgggtttgcaaggttcttgccagagatatcaggtgcagaaccatgaac 414 || |||||||| || | |||||| |||| |||||||||||||||||| ||||| Sbjct: 953 gcggttgggttcgccaagttctttccagcgatatcaggtgcagaaccgtgaac 901 Score = 67.9 bits (34), Expect = 4e-08 Identities = 102/125 (81%) Strand = Plus / Minus Query: 488 gcacatagatcactaataatgtcaccatacagatttggcatcactaatacatcaaatgta 547 ||||| ||||| |||||||||||||| ||||| ||||||||||| || |||||||| Sbjct: 827 gcacacagatcgctaataatgtcaccgtacaggtttggcatcaccaagacatcaaaaagt 768 Query: 548 ccaggattctttacnagcgtcatgcagcaattgtcaataatgacttcctcgtatgtgatt 607 | || || || || ||| |||| ||||| |||||||||| ||| |||||||| ||||| Sbjct: 767 gctgggtttttcacaagcatcatacagcagttgtcaataacgacctcctcgtaagtgatc 708 Query: 608 tcagg 612 ||||| Sbjct: 707 tcagg 703
>gb|AY099823.1| Arabidopsis thaliana putative protein (At5g03290) mRNA, complete cds Length = 1363 Score = 73.8 bits (37), Expect = 6e-10 Identities = 139/173 (80%) Strand = Plus / Minus Query: 242 ccaagatcagcggttctgtacttcccctcggcgattgtctggaggatggcattgtggatc 301 |||||||| ||||||||||| || ||||| || || || | || ||| ||| ||||||| Sbjct: 1121 ccaagatccgcggttctgtatttgccctctgctatggtgttgatgattgcactgtggatt 1062 Query: 302 cggtctgcttggtcgttgaattgcaagtgacgcaacatcataacagcactcaacataaga 361 | |||||||| |||||||| | || ||||||||||||||| || |||||| | | Sbjct: 1061 tgttctgcttgttcgttgaacttcaggtgacgcaacatcatcactccactcagaagcaac 1002 Query: 362 gcagttgggtttgcaaggttcttgccagagatatcaggtgcagaaccatgaac 414 || |||||||| || | |||||| |||| |||||||||||||||||| ||||| Sbjct: 1001 gcggttgggttcgccaagttctttccagcgatatcaggtgcagaaccgtgaac 949 Score = 67.9 bits (34), Expect = 4e-08 Identities = 102/125 (81%) Strand = Plus / Minus Query: 488 gcacatagatcactaataatgtcaccatacagatttggcatcactaatacatcaaatgta 547 ||||| ||||| |||||||||||||| ||||| ||||||||||| || |||||||| Sbjct: 875 gcacacagatcgctaataatgtcaccgtacaggtttggcatcaccaagacatcaaaaagt 816 Query: 548 ccaggattctttacnagcgtcatgcagcaattgtcaataatgacttcctcgtatgtgatt 607 | || || || || ||| |||| ||||| |||||||||| ||| |||||||| ||||| Sbjct: 815 gctgggtttttcacaagcatcatacagcagttgtcaataacgacctcctcgtaagtgatc 756 Query: 608 tcagg 612 ||||| Sbjct: 755 tcagg 751
>gb|AF412100.1|AF412100 Arabidopsis thaliana W25EPL23M/W25EPL23M mRNA, complete cds Length = 1420 Score = 73.8 bits (37), Expect = 6e-10 Identities = 139/173 (80%) Strand = Plus / Minus Query: 242 ccaagatcagcggttctgtacttcccctcggcgattgtctggaggatggcattgtggatc 301 |||||||| ||||||||||| || ||||| || || || | || ||| ||| ||||||| Sbjct: 1133 ccaagatccgcggttctgtatttgccctctgctatggtgttgatgattgcactgtggatt 1074 Query: 302 cggtctgcttggtcgttgaattgcaagtgacgcaacatcataacagcactcaacataaga 361 | |||||||| |||||||| | || ||||||||||||||| || |||||| | | Sbjct: 1073 tgttctgcttgttcgttgaacttcaggtgacgcaacatcatcactccactcagaagcaac 1014 Query: 362 gcagttgggtttgcaaggttcttgccagagatatcaggtgcagaaccatgaac 414 || |||||||| || | |||||| |||| |||||||||||||||||| ||||| Sbjct: 1013 gcggttgggttcgccaagttctttccagcgatatcaggtgcagaaccgtgaac 961 Score = 67.9 bits (34), Expect = 4e-08 Identities = 102/125 (81%) Strand = Plus / Minus Query: 488 gcacatagatcactaataatgtcaccatacagatttggcatcactaatacatcaaatgta 547 ||||| ||||| |||||||||||||| ||||| ||||||||||| || |||||||| Sbjct: 887 gcacacagatcgctaataatgtcaccgtacaggtttggcatcaccaagacatcaaaaagt 828 Query: 548 ccaggattctttacnagcgtcatgcagcaattgtcaataatgacttcctcgtatgtgatt 607 | || || || || ||| |||| ||||| |||||||||| ||| |||||||| ||||| Sbjct: 827 gctgggtttttcacaagcatcatacagcagttgtcaataacgacctcctcgtaagtgatc 768 Query: 608 tcagg 612 ||||| Sbjct: 767 tcagg 763
>ref|NM_180218.1| Arabidopsis thaliana AT3G09805; isocitrate dehydrogenase (NAD+)/ oxidoreductase AT3G09810 (AT3G09805) mRNA, complete cds Length = 1551 Score = 65.9 bits (33), Expect = 1e-07 Identities = 138/173 (79%) Strand = Plus / Minus Query: 245 agatcagcggttctgtacttcccctcggcgattgtctggaggatggcattgtggatccgg 304 |||||||| ||||| ||||| |||||||| ||||| | || ||||||| ||||||| | Sbjct: 1129 agatcagcagttctatactttccctcggctattgtgttgatgatggcactgtggatttgc 1070 Query: 305 tctgcttggtcgttgaattgcaagtgacgcaacatcataacagcactcaacataagagca 364 |||||||| | ||||| | || ||| ||||||||||| || |||||| | | ||| Sbjct: 1069 tctgcttgtttgttgagcttcaggtgccgcaacatcatcactccactcagtagcaaagct 1010 Query: 365 gttgggtttgcaaggttcttgccagagatatcaggtgcagaaccatgaacagc 417 |||||||| || |||||| | |||| |||||||||||||| || |||||||| Sbjct: 1009 gttgggttcgccaggttcattccagcaatatcaggtgcagagccgtgaacagc 957 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Minus Query: 485 ccagcacatagatcactaataatgtcaccatacagatttggcatcactaatacatcaaa 543 |||||||| | ||| || ||||| || ||||| |||||||||||||| || |||||||| Sbjct: 889 ccagcacacaaatcgctgataatatctccatagagatttggcatcaccaagacatcaaa 831
>gb|AF339723.1| Arabidopsis thaliana putative (NAD+) isocitrate dehydrogenase (At3g09805) mRNA, complete cds Length = 1175 Score = 65.9 bits (33), Expect = 1e-07 Identities = 138/173 (79%) Strand = Plus / Minus Query: 245 agatcagcggttctgtacttcccctcggcgattgtctggaggatggcattgtggatccgg 304 |||||||| ||||| ||||| |||||||| ||||| | || ||||||| ||||||| | Sbjct: 1070 agatcagcagttctatactttccctcggctattgtgttgatgatggcactgtggatttgc 1011 Query: 305 tctgcttggtcgttgaattgcaagtgacgcaacatcataacagcactcaacataagagca 364 |||||||| | ||||| | || ||| ||||||||||| || |||||| | | ||| Sbjct: 1010 tctgcttgtttgttgagcttcaggtgccgcaacatcatcactccactcagtagcaaagct 951 Query: 365 gttgggtttgcaaggttcttgccagagatatcaggtgcagaaccatgaacagc 417 |||||||| || |||||| | |||| |||||||||||||| || |||||||| Sbjct: 950 gttgggttcgccaggttcattccagcaatatcaggtgcagagccgtgaacagc 898 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Minus Query: 485 ccagcacatagatcactaataatgtcaccatacagatttggcatcactaatacatcaaa 543 |||||||| | ||| || ||||| || ||||| |||||||||||||| || |||||||| Sbjct: 830 ccagcacacaaatcgctgataatatctccatagagatttggcatcaccaagacatcaaa 772
>gb|AF327427.1| Arabidopsis thaliana putative (NAD+) isocitrate dehydrogenase (At3g09805) mRNA, complete cds Length = 1550 Score = 65.9 bits (33), Expect = 1e-07 Identities = 138/173 (79%) Strand = Plus / Minus Query: 245 agatcagcggttctgtacttcccctcggcgattgtctggaggatggcattgtggatccgg 304 |||||||| ||||| ||||| |||||||| ||||| | || ||||||| ||||||| | Sbjct: 1129 agatcagcagttctatactttccctcggctattgtgttgatgatggcactgtggatttgc 1070 Query: 305 tctgcttggtcgttgaattgcaagtgacgcaacatcataacagcactcaacataagagca 364 |||||||| | ||||| | || ||| ||||||||||| || |||||| | | ||| Sbjct: 1069 tctgcttgtttgttgagcttcaggtgccgcaacatcatcactccactcagtagcaaagct 1010 Query: 365 gttgggtttgcaaggttcttgccagagatatcaggtgcagaaccatgaacagc 417 |||||||| || |||||| | |||| |||||||||||||| || |||||||| Sbjct: 1009 gttgggttcgccaggttcattccagcaatatcaggtgcagagccgtgaacagc 957 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Minus Query: 485 ccagcacatagatcactaataatgtcaccatacagatttggcatcactaatacatcaaa 543 |||||||| | ||| || ||||| || ||||| |||||||||||||| || |||||||| Sbjct: 889 ccagcacacaaatcgctgataatatctccatagagatttggcatcaccaagacatcaaa 831
>gb|AF324664.2|AF324664 Arabidopsis thaliana F8A24.14 (F8A24.14) mRNA, complete cds Length = 1530 Score = 65.9 bits (33), Expect = 1e-07 Identities = 138/173 (79%) Strand = Plus / Minus Query: 245 agatcagcggttctgtacttcccctcggcgattgtctggaggatggcattgtggatccgg 304 |||||||| ||||| ||||| |||||||| ||||| | || ||||||| ||||||| | Sbjct: 1129 agatcagcagttctatactttccctcggctattgtgttgatgatggcactgtggatttgc 1070 Query: 305 tctgcttggtcgttgaattgcaagtgacgcaacatcataacagcactcaacataagagca 364 |||||||| | ||||| | || ||| ||||||||||| || |||||| | | ||| Sbjct: 1069 tctgcttgtttgttgagcttcaggtgccgcaacatcatcactccactcagtagcaaagct 1010 Query: 365 gttgggtttgcaaggttcttgccagagatatcaggtgcagaaccatgaacagc 417 |||||||| || |||||| | |||| |||||||||||||| || |||||||| Sbjct: 1009 gttgggttcgccaggttcattccagcaatatcaggtgcagagccgtgaacagc 957 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Minus Query: 485 ccagcacatagatcactaataatgtcaccatacagatttggcatcactaatacatcaaa 543 |||||||| | ||| || ||||| || ||||| |||||||||||||| || |||||||| Sbjct: 889 ccagcacacaaatcgctgataatatctccatagagatttggcatcaccaagacatcaaa 831
>gb|AY216770.1| Brassica napus cultivar Keng C1 NAD-dependent isocitrate dehydrogenase alpha subunit mRNA, complete cds Length = 1290 Score = 65.9 bits (33), Expect = 1e-07 Identities = 138/173 (79%) Strand = Plus / Minus Query: 242 ccaagatcagcggttctgtacttcccctcggcgattgtctggaggatggcattgtggatc 301 |||||||| ||||||||||| || ||||| || || || | || ||| || |||||||| Sbjct: 941 ccaagatccgcggttctgtattttccctctgctatggtgttgatgattgctctgtggatc 882 Query: 302 cggtctgcttggtcgttgaattgcaagtgacgcaacatcataacagcactcaacataaga 361 | |||||||| ||||| | | || ||||||||||||||| || |||||| | | Sbjct: 881 tgttctgcttgttcgttcagcttcaggtgacgcaacatcatcactccactcagtagcaat 822 Query: 362 gcagttgggtttgcaaggttcttgccagagatatcaggtgcagaaccatgaac 414 || ||||||||||| | |||||| |||| |||||||||||||||||| ||||| Sbjct: 821 gctgttgggtttgccaagttctttccagcgatatcaggtgcagaaccgtgaac 769 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 503 ataatgtcaccatacagatttggcatcactaatacatcaaa 543 ||||||||||| ||||| ||||||||||| || |||||||| Sbjct: 680 ataatgtcaccgtacaggtttggcatcaccaacacatcaaa 640
>gb|AY084425.1| Arabidopsis thaliana clone 108082 mRNA, complete sequence Length = 1526 Score = 65.9 bits (33), Expect = 1e-07 Identities = 138/173 (79%) Strand = Plus / Minus Query: 245 agatcagcggttctgtacttcccctcggcgattgtctggaggatggcattgtggatccgg 304 |||||||| ||||| ||||| |||||||| ||||| | || ||||||| ||||||| | Sbjct: 1129 agatcagcagttctatactttccctcggctattgtgttgatgatggcactgtggatttgc 1070 Query: 305 tctgcttggtcgttgaattgcaagtgacgcaacatcataacagcactcaacataagagca 364 |||||||| | ||||| | || ||| ||||||||||| || |||||| | | ||| Sbjct: 1069 tctgcttgtttgttgagcttcaggtgccgcaacatcatcactccactcagtagcaaagct 1010 Query: 365 gttgggtttgcaaggttcttgccagagatatcaggtgcagaaccatgaacagc 417 |||||||| || |||||| | |||| |||||||||||||| || |||||||| Sbjct: 1009 gttgggttcgccaggttcattccagcaatatcaggtgcagagccgtgaacagc 957 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Minus Query: 485 ccagcacatagatcactaataatgtcaccatacagatttggcatcactaatacatcaaa 543 |||||||| | ||| || ||||| || ||||| |||||||||||||| || |||||||| Sbjct: 889 ccagcacacaaatcgctgataatatctccatagagatttggcatcaccaagacatcaaa 831
>dbj|AK176269.1| Arabidopsis thaliana mRNA, complete cds, clone: RAFL23-17-J10 Length = 1540 Score = 65.9 bits (33), Expect = 1e-07 Identities = 138/173 (79%) Strand = Plus / Minus Query: 245 agatcagcggttctgtacttcccctcggcgattgtctggaggatggcattgtggatccgg 304 |||||||| ||||| ||||| |||||||| ||||| | || ||||||| ||||||| | Sbjct: 1129 agatcagcagttctatactttccctcggctattgtgttgatgatggcactgtggatttgc 1070 Query: 305 tctgcttggtcgttgaattgcaagtgacgcaacatcataacagcactcaacataagagca 364 |||||||| | ||||| | || ||| ||||||||||| || |||||| | | ||| Sbjct: 1069 tctgcttgtttgttgagcttcaggtgccgcaacatcatcactccactcagtagcaaagct 1010 Query: 365 gttgggtttgcaaggttcttgccagagatatcaggtgcagaaccatgaacagc 417 |||||||| || |||||| | |||| |||||||||||||| || |||||||| Sbjct: 1009 gttgggttcgccaggttcattccagcaatatcaggtgcagagccgtgaacagc 957 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Minus Query: 485 ccagcacatagatcactaataatgtcaccatacagatttggcatcactaatacatcaaa 543 |||||||| | ||| || ||||| || ||||| |||||||||||||| || |||||||| Sbjct: 889 ccagcacacaaatcgctgataatatctccatagagatttggcatcaccaagacatcaaa 831
>emb|AL163002.1|ATF15A17 Arabidopsis thaliana DNA chromosome 5, BAC clone F15A17 (ESSA project) Length = 99008 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 488 gcacatagatcactaataatgtcaccatacagatttggcatcactaatacatcaaa 543 ||||| ||||| |||||||||||||| ||||| ||||||||||| || |||||||| Sbjct: 98425 gcacacagatcgctaataatgtcaccgtacaggtttggcatcaccaagacatcaaa 98370 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 242 ccaagatcagcggttctgtacttcccctcggcgattgtctggaggatggcattgtggatc 301 |||||||| ||||||||||| || ||||| || || || | || ||| ||| ||||||| Sbjct: 98899 ccaagatccgcggttctgtatttgccctctgctatggtgttgatgattgcactgtggatt 98840 Query: 302 cggtctgcttggtcgttgaattgcaagtgacgcaacatcat 342 | |||||||| |||||||| | || ||||||||||||||| Sbjct: 98839 tgttctgcttgttcgttgaacttcaggtgacgcaacatcat 98799 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 386 ccagagatatcaggtgcagaaccatgaac 414 |||| |||||||||||||||||| ||||| Sbjct: 98619 ccagcgatatcaggtgcagaaccgtgaac 98591
>emb|AL162751.1|ATF12E4 Arabidopsis thaliana DNA chromosome 5, BAC clone F12E4 (ESSA project) Length = 121552 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 488 gcacatagatcactaataatgtcaccatacagatttggcatcactaatacatcaaa 543 ||||| ||||| |||||||||||||| ||||| ||||||||||| || |||||||| Sbjct: 9224 gcacacagatcgctaataatgtcaccgtacaggtttggcatcaccaagacatcaaa 9169 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 242 ccaagatcagcggttctgtacttcccctcggcgattgtctggaggatggcattgtggatc 301 |||||||| ||||||||||| || ||||| || || || | || ||| ||| ||||||| Sbjct: 9698 ccaagatccgcggttctgtatttgccctctgctatggtgttgatgattgcactgtggatt 9639 Query: 302 cggtctgcttggtcgttgaattgcaagtgacgcaacatcat 342 | |||||||| |||||||| | || ||||||||||||||| Sbjct: 9638 tgttctgcttgttcgttgaacttcaggtgacgcaacatcat 9598 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 386 ccagagatatcaggtgcagaaccatgaac 414 |||| |||||||||||||||||| ||||| Sbjct: 9418 ccagcgatatcaggtgcagaaccgtgaac 9390
>dbj|AB005240.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOK16 Length = 80770 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Minus Query: 488 gcacatagatcactaataatgtcaccatacagatttggcatcactaatacatcaaa 543 ||||| ||||| |||||||||||||| ||||| ||||||||||| || |||||||| Sbjct: 69564 gcacacagatcgctaataatgtcaccgtacaggtttggcatcaccaagacatcaaa 69509 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 242 ccaagatcagcggttctgtacttcccctcggcgattgtctggaggatggcattgtggatc 301 |||||||| ||||||||||| || ||||| || || || | || ||| ||| ||||||| Sbjct: 70038 ccaagatccgcggttctgtatttgccctctgctatggtgttgatgattgcactgtggatt 69979 Query: 302 cggtctgcttggtcgttgaattgcaagtgacgcaacatcat 342 | |||||||| |||||||| | || ||||||||||||||| Sbjct: 69978 tgttctgcttgttcgttgaacttcaggtgacgcaacatcat 69938 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 386 ccagagatatcaggtgcagaaccatgaac 414 |||| |||||||||||||||||| ||||| Sbjct: 69758 ccagcgatatcaggtgcagaaccgtgaac 69730
>emb|CR704849.2|CNS0G6T9 Tetraodon nigroviridis full-length cDNA Length = 1155 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 485 ccagcacatagatcactaataatgtcaccatacagatttggcatcactaatacatcaaa 543 |||||||| |||||||| | |||||| ||||||||||| |||||||| || |||||||| Sbjct: 831 ccagcacacagatcactcaaaatgtctccatacagattcggcatcaccaacacatcaaa 773
>emb|CR662891.2|CNS0FAGH Tetraodon nigroviridis full-length cDNA Length = 1444 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 485 ccagcacatagatcactaataatgtcaccatacagatttggcatcactaatacatcaaa 543 |||||||| |||||||| | |||||| ||||||||||| |||||||| || |||||||| Sbjct: 804 ccagcacacagatcactcaaaatgtctccatacagattcggcatcaccaacacatcaaa 746
>gb|AY216769.1| Brassica napus cultivar Shan 2B NAD-dependent isocitrate dehydrogenase alpha subunit mRNA, complete cds Length = 1290 Score = 58.0 bits (29), Expect = 4e-05 Identities = 137/173 (79%) Strand = Plus / Minus Query: 242 ccaagatcagcggttctgtacttcccctcggcgattgtctggaggatggcattgtggatc 301 |||||||| ||||||||||| || ||||| || || || | || ||| || |||||||| Sbjct: 941 ccaagatccgcggttctgtattttccctccgctatggtgttgatgattgctctgtggatc 882 Query: 302 cggtctgcttggtcgttgaattgcaagtgacgcaacatcataacagcactcaacataaga 361 | |||||||| ||||| | | || ||||||||||||||| || |||||| | | Sbjct: 881 tgttctgcttgttcgttcagcttcaggtgacgcaacatcatcactccactcagtagcaat 822 Query: 362 gcagttgggtttgcaaggttcttgccagagatatcaggtgcagaaccatgaac 414 || |||||||| || | |||||| |||| |||||||||||||||||| ||||| Sbjct: 821 gctgttgggttcgccaagttctttccagcgatatcaggtgcagaaccgtgaac 769 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 503 ataatgtcaccatacagatttggcatcactaatacatcaaa 543 ||||||||||| ||||| ||||||||||| || |||||||| Sbjct: 680 ataatgtcaccgtacaggtttggcatcaccaacacatcaaa 640
>gb|AY216768.1| Brassica napus cultivar Shan 2A NAD-dependent isocitrate dehydrogenase alpha subunit mRNA, complete cds Length = 1290 Score = 58.0 bits (29), Expect = 4e-05 Identities = 137/173 (79%) Strand = Plus / Minus Query: 242 ccaagatcagcggttctgtacttcccctcggcgattgtctggaggatggcattgtggatc 301 |||||||| ||||||||||| || ||||| || || || | || ||| || |||||||| Sbjct: 941 ccaagatccgcggttctgtattttccctccgctatggtgttgatgattgctctgtggatc 882 Query: 302 cggtctgcttggtcgttgaattgcaagtgacgcaacatcataacagcactcaacataaga 361 | |||||||| ||||| | | || ||||||||||||||| || |||||| | | Sbjct: 881 tgttctgcttgttcgttcagcttcaggtgacgcaacatcatcactccactcagtagcaat 822 Query: 362 gcagttgggtttgcaaggttcttgccagagatatcaggtgcagaaccatgaac 414 || |||||||| || | |||||| |||| |||||||||||||||||| ||||| Sbjct: 821 gctgttgggttcgccaagttctttccagcgatatcaggtgcagaaccgtgaac 769 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 503 ataatgtcaccatacagatttggcatcactaatacatcaaa 543 ||||||||||| ||||| ||||||||||| || |||||||| Sbjct: 680 ataatgtcaccgtacaggtttggcatcaccaacacatcaaa 640
>gb|AY609663.1| Sus scrofa clone Clu_241.scr.msk.p1.Contig4, mRNA sequence Length = 2579 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 473 cctccgatcaaaccagcacatagatcactaataatgtcaccatacagatttggcat 528 ||||||||||| || ||||| || ||||||| |||||| ||||||| ||||||||| Sbjct: 819 cctccgatcaatcccgcacacaggtcactaagaatgtctccatacaaatttggcat 764
>ref|XM_389756.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09580.1) partial mRNA Length = 1146 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 362 gcagttgggtttgcaaggttcttgccagagatatcaggtgcagaacc 408 ||||| ||||| |||||||||||||||| ||||||||| || ||||| Sbjct: 974 gcagtggggttggcaaggttcttgccagcgatatcaggggcggaacc 928
>gb|AC015985.10|ATAC015985 Arabidopsis thaliana chromosome III BAC F8A24 genomic sequence, complete sequence Length = 72902 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Plus Query: 245 agatcagcggttctgtacttcccctcggcgattgtctggaggatggcattgtggatccgg 304 |||||||| ||||| ||||| |||||||| ||||| | || ||||||| ||||||| | Sbjct: 55707 agatcagcagttctatactttccctcggctattgtgttgatgatggcactgtggatttgc 55766 Query: 305 tctgcttggtcgttgaattgcaagtgacgcaacatcat 342 |||||||| | ||||| | || ||| ||||||||||| Sbjct: 55767 tctgcttgtttgttgagcttcaggtgccgcaacatcat 55804 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 485 ccagcacatagatcactaataatgtcaccatacagatttggcatcactaatacatcaaa 543 |||||||| | ||| || ||||| || ||||| |||||||||||||| || |||||||| Sbjct: 56520 ccagcacacaaatcgctgataatatctccatagagatttggcatcaccaagacatcaaa 56578
>gb|AF180896.1|AF180896 Arabidopsis thaliana adenosine kinase 1 (ADK1) gene, complete cds Length = 4962 Score = 52.0 bits (26), Expect = 0.002 Identities = 80/98 (81%) Strand = Plus / Minus Query: 245 agatcagcggttctgtacttcccctcggcgattgtctggaggatggcattgtggatccgg 304 |||||||| ||||| ||||| |||||||| ||||| | || ||||||| ||||||| | Sbjct: 990 agatcagcagttctatactttccctcggctattgtgttgatgatggcactgtggatttgc 931 Query: 305 tctgcttggtcgttgaattgcaagtgacgcaacatcat 342 |||||||| | ||||| | || ||| ||||||||||| Sbjct: 930 tctgcttgtttgttgagcttcaggtgccgcaacatcat 893 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Minus Query: 485 ccagcacatagatcactaataatgtcaccatacagatttggcatcactaatacatcaaa 543 |||||||| | ||| || ||||| || ||||| |||||||||||||| || |||||||| Sbjct: 177 ccagcacacaaatcgctgataatatctccatagagatttggcatcaccaagacatcaaa 119
>gb|BC064220.1| Xenopus tropicalis isocitrate dehydrogenase 3 (NAD+) alpha, mRNA (cDNA clone MGC:76128 IMAGE:5309202), complete cds Length = 1992 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 467 cccaagcctccgatcaaaccagcacatagatcactaataatgtcaccatacagatttggc 526 |||| |||||| || ||||| ||||| || ||||| | ||||||||||| || |||||| Sbjct: 816 cccaggcctccaattaaacctgcacaaaggtcactcaagatgtcaccataaaggtttggc 757 Query: 527 atcactaatacatcaaa 543 || ||||| |||||||| Sbjct: 756 atgactaacacatcaaa 740
>ref|NM_204021.1| Xenopus tropicalis isocitrate dehydrogenase 3 (NAD+) alpha (idh3a), mRNA Length = 1992 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 467 cccaagcctccgatcaaaccagcacatagatcactaataatgtcaccatacagatttggc 526 |||| |||||| || ||||| ||||| || ||||| | ||||||||||| || |||||| Sbjct: 816 cccaggcctccaattaaacctgcacaaaggtcactcaagatgtcaccataaaggtttggc 757 Query: 527 atcactaatacatcaaa 543 || ||||| |||||||| Sbjct: 756 atgactaacacatcaaa 740
>ref|XM_640538.1| Dictyostelium discoideum isocitrate dehydrogenase subunit alpha (DDB0231288), partial mRNA Length = 1065 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Minus Query: 482 aaaccagcacatagatcactaataatgtcaccatacagatttgg 525 ||||||||||||| |||||||| || |||||||| |||||||| Sbjct: 755 aaaccagcacataaatcactaacgatatcaccatagagatttgg 712
>emb|CR352310.15| Zebrafish DNA sequence from clone CH211-254E10 in linkage group 24, complete sequence Length = 181023 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 394 atcaggtgcagaaccatgaacagc 417 |||||||||||||||||||||||| Sbjct: 32988 atcaggtgcagaaccatgaacagc 33011
>emb|X87172.1|MFNADISDH M.fascicularis mRNA for NAD+-isocitrate dehydrogenase, alpha subunit Length = 1024 Score = 48.1 bits (24), Expect = 0.034 Identities = 48/56 (85%) Strand = Plus / Minus Query: 473 cctccgatcaaaccagcacatagatcactaataatgtcaccatacagatttggcat 528 ||||||||||| || ||||| || ||||||| ||||| ||||||| ||||||||| Sbjct: 729 cctccgatcaatcctgcacacaggtcactaaggatgtctccatacaaatttggcat 674
>emb|AL691521.7| Zebrafish DNA sequence from clone BUSM1-186K12 in linkage group 7 Contains then men1 gene for multiple endocrine neoplasia type 1 (menin 1), a gene for a novel protein kinase, three gene for novel immune-type receptors and a CpG island, complete sequence Length = 109831 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 394 atcaggtgcagaaccatgaacagc 417 |||||||||||||||||||||||| Sbjct: 95657 atcaggtgcagaaccatgaacagc 95680
>emb|BX511222.10| Zebrafish DNA sequence from clone DKEY-250J7 in linkage group 18, complete sequence Length = 151023 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 394 atcaggtgcagaaccatgaacagc 417 |||||||||||||||||||||||| Sbjct: 9002 atcaggtgcagaaccatgaacagc 8979
>emb|BX247869.21| Zebrafish DNA sequence from clone CH211-67D2 in linkage group 21, complete sequence Length = 181119 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 394 atcaggtgcagaaccatgaacagc 417 |||||||||||||||||||||||| Sbjct: 45150 atcaggtgcagaaccatgaacagc 45127
>emb|CR860617.1| Pongo pygmaeus mRNA; cDNA DKFZp459J1325 (from clone DKFZp459J1325) Length = 2682 Score = 48.1 bits (24), Expect = 0.034 Identities = 48/56 (85%) Strand = Plus / Minus Query: 473 cctccgatcaaaccagcacatagatcactaataatgtcaccatacagatttggcat 528 ||||||||||| || ||||| || ||||||| ||||| ||||||| ||||||||| Sbjct: 844 cctccgatcaatcctgcacacaggtcactaaggatgtctccatacaaatttggcat 789
>emb|CR858162.1| Pongo pygmaeus mRNA; cDNA DKFZp468K2311 (from clone DKFZp468K2311) Length = 2683 Score = 48.1 bits (24), Expect = 0.034 Identities = 48/56 (85%) Strand = Plus / Minus Query: 473 cctccgatcaaaccagcacatagatcactaataatgtcaccatacagatttggcat 528 ||||||||||| || ||||| || ||||||| ||||| ||||||| ||||||||| Sbjct: 852 cctccgatcaatcctgcacacaggtcactaaggatgtctccatacaaatttggcat 797
>gb|AY680462.1| Macaca mulatta clone ds2_h11_t7_071 isocitrate dehydrogenase 3 (NAD+) alpha (IDH3A) mRNA, partial cds Length = 488 Score = 48.1 bits (24), Expect = 0.034 Identities = 48/56 (85%) Strand = Plus / Minus Query: 473 cctccgatcaaaccagcacatagatcactaataatgtcaccatacagatttggcat 528 ||||||||||| || ||||| || ||||||| ||||| ||||||| ||||||||| Sbjct: 86 cctccgatcaatcctgcacacaggtcactaaggatgtctccatacaaatttggcat 31
>emb|AL772141.7| Zebrafish DNA sequence from clone CH211-154O2 in linkage group 18, complete sequence Length = 150428 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 394 atcaggtgcagaaccatgaacagc 417 |||||||||||||||||||||||| Sbjct: 135685 atcaggtgcagaaccatgaacagc 135662
>emb|BX323987.12| Zebrafish DNA sequence from clone DKEY-125E8, complete sequence Length = 164299 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 394 atcaggtgcagaaccatgaacagc 417 |||||||||||||||||||||||| Sbjct: 102243 atcaggtgcagaaccatgaacagc 102220
>emb|BX321919.10| Zebrafish DNA sequence from clone CH211-236B8, complete sequence Length = 163495 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 394 atcaggtgcagaaccatgaacagc 417 |||||||||||||||||||||||| Sbjct: 140633 atcaggtgcagaaccatgaacagc 140610
>emb|CR536616.7| Zebrafish DNA sequence from clone CH211-264E16 in linkage group 18, complete sequence Length = 154119 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 394 atcaggtgcagaaccatgaacagc 417 |||||||||||||||||||||||| Sbjct: 103497 atcaggtgcagaaccatgaacagc 103520
>emb|AL732544.12| Zebrafish DNA sequence from clone BUSM1-6I1 in linkage group 7, complete sequence Length = 135141 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 394 atcaggtgcagaaccatgaacagc 417 |||||||||||||||||||||||| Sbjct: 71968 atcaggtgcagaaccatgaacagc 71991
>emb|BX072538.10| Zebrafish DNA sequence from clone DKEY-217K21 in linkage group 4, complete sequence Length = 179453 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 394 atcaggtgcagaaccatgaacagc 417 |||||||||||||||||||||||| Sbjct: 20485 atcaggtgcagaaccatgaacagc 20508
>emb|BX001030.7| Zebrafish DNA sequence from clone CH211-234P6 in linkage group 24, complete sequence Length = 156560 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 394 atcaggtgcagaaccatgaacagc 417 |||||||||||||||||||||||| Sbjct: 39242 atcaggtgcagaaccatgaacagc 39219
>emb|BX005289.15| Zebrafish DNA sequence from clone DKEY-68I6 in linkage group 18, complete sequence Length = 155905 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Minus Query: 394 atcaggtgcagaaccatgaacagc 417 |||||||||||||||||||||||| Sbjct: 91745 atcaggtgcagaaccatgaacagc 91722
>gb|AY433046.1| Aedes aegypti ASAP ID: 36415 isocitrate dehydrogenase mRNA sequence Length = 493 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Minus Query: 506 atgtcaccatacagatttggcatcactaatacatcaaat 544 |||||||| |||||||||||||| || || ||||||||| Sbjct: 150 atgtcaccgtacagatttggcatgaccaagacatcaaat 112
>emb|BX511097.21| Zebrafish DNA sequence from clone DKEYP-93C5 in linkage group 2, complete sequence Length = 134883 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 394 atcaggtgcagaaccatgaacag 416 ||||||||||||||||||||||| Sbjct: 8184 atcaggtgcagaaccatgaacag 8162
>gb|AC150977.12| Medicago truncatula clone mth2-32m9, complete sequence Length = 125772 Score = 44.1 bits (22), Expect = 0.54 Identities = 31/34 (91%) Strand = Plus / Plus Query: 567 tcatgcagcaattgtcaataatgacttcctcgta 600 ||||||||||||||||||| | ||||||||||| Sbjct: 17978 tcatgcagcaattgtcaatgacaacttcctcgta 18011 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 392 atatcaggtgcagaaccatgaacagcctc 420 ||||||||||| |||||||| |||||||| Sbjct: 17616 atatcaggtgctgaaccatgtacagcctc 17644 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 239 ccaccaagatcagcggttctgtacttccc 267 |||||||||||||| |||| ||||||||| Sbjct: 15491 ccaccaagatcagcagttcggtacttccc 15519 Score = 40.1 bits (20), Expect = 8.4 Identities = 65/80 (81%) Strand = Plus / Plus Query: 464 aagcccaagcctccgatcaaaccagcacatagatcactaataatgtcaccatacagattt 523 |||||||| || || ||||| |||||||| || || || || || ||||| || || || Sbjct: 17778 aagcccaatcccccaatcaagccagcacacaggtcgctgattatatcaccgtaaaggtta 17837 Query: 524 ggcatcactaatacatcaaa 543 |||||||| ||||||||||| Sbjct: 17838 ggcatcaccaatacatcaaa 17857
>gb|CP000237.1| Neorickettsia sennetsu strain Miyayama, complete genome Length = 859006 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 395 tcaggtgcagaaccatgaacagcctc 420 ||||||||||||||||| |||||||| Sbjct: 141823 tcaggtgcagaaccatgtacagcctc 141848
>gb|AC119915.12| Mus musculus chromosome 7, clone RP24-244N16, complete sequence Length = 168834 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 277 tgtctggaggatggcattgtg 297 ||||||||||||||||||||| Sbjct: 104564 tgtctggaggatggcattgtg 104584
>gb|AC113514.9| Mus musculus chromosome 19, clone RP23-475D11, complete sequence Length = 170366 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 500 ctaataatgtcaccatacaga 520 ||||||||||||||||||||| Sbjct: 104279 ctaataatgtcaccatacaga 104299
>emb|BX901917.9| Zebrafish DNA sequence from clone DKEY-32E10 in linkage group 5, complete sequence Length = 238589 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 394 atcaggtgcagaaccatgaac 414 ||||||||||||||||||||| Sbjct: 6050 atcaggtgcagaaccatgaac 6030
>gb|AC023114.5| Homo sapiens BAC clone RP11-266O8 from 15, complete sequence Length = 164242 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 526 catcactaatacatcaaatgt 546 ||||||||||||||||||||| Sbjct: 112925 catcactaatacatcaaatgt 112945
>ref|NM_106704.2| Arabidopsis thaliana 3-isopropylmalate dehydrogenase/ oxidoreductase AT1G80560 mRNA, complete cds Length = 1432 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 atatcaggtgcagaaccatg 411 |||||||||||||||||||| Sbjct: 1023 atatcaggtgcagaaccatg 1004
>gb|AC169502.1| Mus musculus BAC clone RP24-409G12 from chromosome 9, complete sequence Length = 146217 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 tgaacagcctctgccagaca 429 |||||||||||||||||||| Sbjct: 48236 tgaacagcctctgccagaca 48217
>gb|AY813425.1| Schistosoma japonicum SJCHGC02901 protein mRNA, complete cds Length = 1538 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 520 atttggcatcactaatacatcaaa 543 ||||||||| |||||||||||||| Sbjct: 734 atttggcataactaatacatcaaa 711
>emb|BX469901.13| Zebrafish DNA sequence from clone CH211-150E8 in linkage group 8, complete sequence Length = 180553 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 394 atcaggtgcagaaccatgaacagc 417 ||||| |||||||||||||||||| Sbjct: 38402 atcagatgcagaaccatgaacagc 38379
>ref|NM_005530.2| Homo sapiens isocitrate dehydrogenase 3 (NAD+) alpha (IDH3A), nuclear gene encoding mitochondrial protein, mRNA Length = 2701 Score = 40.1 bits (20), Expect = 8.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 473 cctccgatcaaaccagcacatagatcactaataatgtcaccatacagatttggcat 528 ||||||||||| || ||||| | ||||||| ||||| ||||||| ||||||||| Sbjct: 833 cctccgatcaatcctgcacacaagtcactaaggatgtctccatacaaatttggcat 778
>emb|Y10216.1|ATIMDH A.thaliana mRNA for hypothetical 3-isopropylmalate dehydrogenase Length = 1457 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 atatcaggtgcagaaccatg 411 |||||||||||||||||||| Sbjct: 1023 atatcaggtgcagaaccatg 1004
>emb|X59970.1|BNIPMDH B.napus mRNA for 3-isopropylmalate dehydrogenase Length = 1428 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 atatcaggtgcagaaccatg 411 |||||||||||||||||||| Sbjct: 999 atatcaggtgcagaaccatg 980
>emb|AL442090.1|HSM802824 Homo sapiens mRNA; cDNA DKFZp761L1216 (from clone DKFZp761L1216) Length = 2606 Score = 40.1 bits (20), Expect = 8.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 473 cctccgatcaaaccagcacatagatcactaataatgtcaccatacagatttggcat 528 ||||||||||| || ||||| | ||||||| ||||| ||||||| ||||||||| Sbjct: 755 cctccgatcaatcctgcacacaagtcactaaggatgtctccatacaaatttggcat 700
>emb|CR376736.5| Zebrafish DNA sequence from clone DKEYP-86G11 in linkage group 24, complete sequence Length = 204538 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 394 atcaggtgcagaaccatgaacagc 417 ||||||| |||||||||||||||| Sbjct: 13258 atcaggtacagaaccatgaacagc 13281
>gb|BT007473.1| Synthetic construct Homo sapiens isocitrate dehydrogenase 3 (NAD+) alpha mRNA, partial cds Length = 1101 Score = 40.1 bits (20), Expect = 8.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 473 cctccgatcaaaccagcacatagatcactaataatgtcaccatacagatttggcat 528 ||||||||||| || ||||| | ||||||| ||||| ||||||| ||||||||| Sbjct: 806 cctccgatcaatcctgcacacaagtcactaaggatgtctccatacaaatttggcat 751
>emb|CR354424.7| Zebrafish DNA sequence from clone CH211-125L9 in linkage group 24, complete sequence Length = 156999 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 tcactaatacatcaaatgta 547 |||||||||||||||||||| Sbjct: 112183 tcactaatacatcaaatgta 112164
>emb|AL672281.18| Mouse DNA sequence from clone DN-322E23 on chromosome 3 Contains the 5' end of the Ptgfrn gene for prostaglandin F2 receptor negative regulator and a CpG island, complete sequence Length = 73520 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 293 ttgtggatccggtctgcttggtcgttga 320 |||||||| |||||||||||||| |||| Sbjct: 27452 ttgtggattcggtctgcttggtccttga 27425
>emb|AL606702.7| Zebrafish DNA sequence from clone BUSM1-172K9 in linkage group 15 Contains a novel transposase pseudogene and a putative novel gene, complete sequence Length = 102736 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 394 atcaggtgcagaaccatgaacagc 417 |||||| ||||||||||||||||| Sbjct: 18486 atcaggagcagaaccatgaacagc 18509
>emb|CR361551.8| Zebrafish DNA sequence from clone CH211-224M9 in linkage group 1, complete sequence Length = 177606 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 394 atcaggtgcagaaccatgaacagc 417 |||||||||||| ||||||||||| Sbjct: 93163 atcaggtgcagatccatgaacagc 93186
>gb|BC021967.2| Homo sapiens isocitrate dehydrogenase 3 (NAD+) alpha, mRNA (cDNA clone MGC:1406 IMAGE:2989636), complete cds Length = 1803 Score = 40.1 bits (20), Expect = 8.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 473 cctccgatcaaaccagcacatagatcactaataatgtcaccatacagatttggcat 528 ||||||||||| || ||||| | ||||||| ||||| ||||||| ||||||||| Sbjct: 826 cctccgatcaatcctgcacacaagtcactaaggatgtctccatacaaatttggcat 771
>emb|CR749548.1| Homo sapiens mRNA; cDNA DKFZp686A08194 (from clone DKFZp686A08194) Length = 2474 Score = 40.1 bits (20), Expect = 8.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 473 cctccgatcaaaccagcacatagatcactaataatgtcaccatacagatttggcat 528 ||||||||||| || ||||| | ||||||| ||||| ||||||| ||||||||| Sbjct: 1497 cctccgatcaatcctgcacacaagtcactaaggatgtctccatacaaatttggcat 1442
>emb|CR624257.1| full-length cDNA clone CS0DI013YM10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1349 Score = 40.1 bits (20), Expect = 8.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 473 cctccgatcaaaccagcacatagatcactaataatgtcaccatacagatttggcat 528 ||||||||||| || ||||| | ||||||| ||||| ||||||| ||||||||| Sbjct: 821 cctccgatcaatcctgcacacaagtcactaaggatgtctccatacaaatttggcat 766
>gb|AY114627.1| Arabidopsis thaliana putative 3-isopropylmalate dehydrogenase (At1g80560) mRNA, complete cds Length = 1356 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 atatcaggtgcagaaccatg 411 |||||||||||||||||||| Sbjct: 980 atatcaggtgcagaaccatg 961
>emb|CR599067.1| full-length cDNA clone CS0DN003YH19 of Adult brain of Homo sapiens (human) Length = 2081 Score = 40.1 bits (20), Expect = 8.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 473 cctccgatcaaaccagcacatagatcactaataatgtcaccatacagatttggcat 528 ||||||||||| || ||||| | ||||||| ||||| ||||||| ||||||||| Sbjct: 1076 cctccgatcaatcctgcacacaagtcactaaggatgtctccatacaaatttggcat 1021
>gb|AC110774.3| Homo sapiens BAC clone RP11-254A24 from 4, complete sequence Length = 121016 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 actaataatgtcaccataca 518 |||||||||||||||||||| Sbjct: 72640 actaataatgtcaccataca 72621
>gb|AY062441.1| Arabidopsis thaliana putative 3-isopropylmalate dehydrogenase (At1g80560; T21F11.11) mRNA, complete cds Length = 1406 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 atatcaggtgcagaaccatg 411 |||||||||||||||||||| Sbjct: 1001 atatcaggtgcagaaccatg 982
>emb|AL929396.18| Zebrafish DNA sequence from clone CH211-93G23 in linkage group 1, complete sequence Length = 169067 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 394 atcaggtgcagaaccatgaacagc 417 |||||| ||||||||||||||||| Sbjct: 135666 atcaggagcagaaccatgaacagc 135689
>emb|BX815110.1|CNS0ABD5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS33ZE01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1375 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 atatcaggtgcagaaccatg 411 |||||||||||||||||||| Sbjct: 1001 atatcaggtgcagaaccatg 982
>dbj|AK222973.1| Homo sapiens mRNA for isocitrate dehydrogenase 3 (NAD+) alpha precursor variant, clone: HSI02474 Length = 1332 Score = 40.1 bits (20), Expect = 8.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 473 cctccgatcaaaccagcacatagatcactaataatgtcaccatacagatttggcat 528 ||||||||||| || ||||| | ||||||| ||||| ||||||| ||||||||| Sbjct: 817 cctccgatcaatcctgcacacaagtcactaaggatgtctccatacaaatttggcat 762
>gb|AC018848.6|AC018848 Arabidopsis thaliana chromosome 1 BAC F5I6 genomic sequence, complete sequence Length = 132990 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 atatcaggtgcagaaccatg 411 |||||||||||||||||||| Sbjct: 117161 atatcaggtgcagaaccatg 117142
>gb|AC018849.2|AC018849 Arabidopsis thaliana chromosome 1 BAC T21F11 genomic sequence, complete sequence Length = 89811 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 atatcaggtgcagaaccatg 411 |||||||||||||||||||| Sbjct: 28989 atatcaggtgcagaaccatg 29008
>gb|AY085451.1| Arabidopsis thaliana clone 152141 mRNA, complete sequence Length = 1420 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 atatcaggtgcagaaccatg 411 |||||||||||||||||||| Sbjct: 1015 atatcaggtgcagaaccatg 996
>emb|AL954187.5| Zebrafish DNA sequence from clone CH211-69P5 in linkage group 15, complete sequence Length = 185137 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 acagcactcaacataagagc 363 |||||||||||||||||||| Sbjct: 139568 acagcactcaacataagagc 139587
>gb|AY892667.1| Synthetic construct Homo sapiens clone FLH024936.01L isocitrate dehydrogenase 3 (NAD+) alpha (IDH3A) mRNA, partial cds Length = 1101 Score = 40.1 bits (20), Expect = 8.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 473 cctccgatcaaaccagcacatagatcactaataatgtcaccatacagatttggcat 528 ||||||||||| || ||||| | ||||||| ||||| ||||||| ||||||||| Sbjct: 806 cctccgatcaatcctgcacacaagtcactaaggatgtctccatacaaatttggcat 751
>gb|AY892666.1| Synthetic construct Homo sapiens clone FLH024935.01L isocitrate dehydrogenase 3 (NAD+) alpha (IDH3A) mRNA, partial cds Length = 1101 Score = 40.1 bits (20), Expect = 8.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 473 cctccgatcaaaccagcacatagatcactaataatgtcaccatacagatttggcat 528 ||||||||||| || ||||| | ||||||| ||||| ||||||| ||||||||| Sbjct: 806 cctccgatcaatcctgcacacaagtcactaaggatgtctccatacaaatttggcat 751
>emb|BX294130.5| Zebrafish DNA sequence from clone DKEY-263O22 in linkage group 19, complete sequence Length = 205973 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 394 atcaggtgcagaaccatgaacagc 417 |||||| ||||||||||||||||| Sbjct: 159720 atcaggagcagaaccatgaacagc 159743
>emb|AL110096.1|IROEST002 Homo sapiens EST from clone 501821, 5' end Length = 583 Score = 40.1 bits (20), Expect = 8.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 473 cctccgatcaaaccagcacatagatcactaataatgtcaccatacagatttggcat 528 ||||||||||| || ||||| | ||||||| ||||| ||||||| ||||||||| Sbjct: 480 cctccgatcaatcctgcacacaagtcactaaggatgtctccatacaaatttggcat 425
>emb|BX000451.4| Zebrafish DNA sequence from clone CH211-30E10, complete sequence Length = 153155 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 394 atcaggtgcagaaccatgaacagc 417 ||||||||||||||||| |||||| Sbjct: 31692 atcaggtgcagaaccataaacagc 31715
>emb|AL954326.7| Zebrafish DNA sequence from clone DKEY-28N4, complete sequence Length = 147387 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 acagcactcaacataagagc 363 |||||||||||||||||||| Sbjct: 27723 acagcactcaacataagagc 27742
>gb|DQ153051.1| Uncultured bacterium clone FaeML-4 formaldehyde-activating enzyme (fae) gene, partial cds Length = 301 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 cgattgtctggaggatggca 292 |||||||||||||||||||| Sbjct: 228 cgattgtctggaggatggca 247
>gb|AC171198.1| Mus musculus BAC clone RP23-251J18 from chromosome 9, complete sequence Length = 178608 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 tgaacagcctctgccagaca 429 |||||||||||||||||||| Sbjct: 148399 tgaacagcctctgccagaca 148380
>gb|U07681.1|HSU07681 Human NAD(H)-specific isocitrate dehydrogenase alpha subunit precursor mRNA, complete cds Length = 2628 Score = 40.1 bits (20), Expect = 8.4 Identities = 47/56 (83%) Strand = Plus / Minus Query: 473 cctccgatcaaaccagcacatagatcactaataatgtcaccatacagatttggcat 528 ||||||||||| || ||||| | ||||||| ||||| ||||||| ||||||||| Sbjct: 811 cctccgatcaatcctgcacacaagtcactaaggatgtctccatacaaatttggcat 756
>emb|AL645930.15| Mouse DNA sequence from clone RP23-434L7 on chromosome 3, complete sequence Length = 227993 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 293 ttgtggatccggtctgcttggtcgttga 320 |||||||| |||||||||||||| |||| Sbjct: 45533 ttgtggattcggtctgcttggtccttga 45506
>gb|M75903.1|SPU3ID S.platensis 3-isopropylmalate dehydrogenase (leuB) gene, 5' end Length = 1065 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 331 acgcaacatcataacagcactcaa 354 ||||||||||||| |||||||||| Sbjct: 927 acgcaacatcatagcagcactcaa 904 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,545,199 Number of Sequences: 3902068 Number of extensions: 4545199 Number of successful extensions: 81052 Number of sequences better than 10.0: 100 Number of HSP's better than 10.0 without gapping: 100 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 80812 Number of HSP's gapped (non-prelim): 223 length of query: 615 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 592 effective length of database: 17,143,297,704 effective search space: 10148832240768 effective search space used: 10148832240768 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)