ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags15o12 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB115914.1| Triticum aestivum Wrab18 mRNA for ABA inducible protein, complete cds Length = 852 Score = 646 bits (326), Expect = 0.0 Identities = 399/422 (94%), Gaps = 1/422 (0%) Strand = Plus / Minus Query: 217 atgcgtctagtgatccccggtgatcttcccagtggtggtgtccttgctggtgttggtgtt 276 ||||||||||||||||| ||||||||| | |||||| |||||||| |||||||||||| Sbjct: 628 atgcgtctagtgatccctagtgatcttctcggtggtgctgtccttggcggtgttggtgtt 569 Query: 277 gtcaccgcccatgcccagcgtgttggccacggcgtccttggcgcccaccacggcgttcac 336 ||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |||| Sbjct: 568 gtcgccgcccatgcccagcgtgttcgccacggcgtccttggcgcccaccacggcgctcac 509 Query: 337 caccgtctcgccggcctgctggagggcgctgccggtcttgtccttgccggcgacggcgga 396 |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 508 caccgtctcgccggcctgctggagcacgctgccggtcttgtccttgccggccacggcgga 449 Query: 397 ctccttggtgtactgcgcggcgtcggaggacctctcctgcgcgtactgcgccgtctccga 456 |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 448 ctccttggtgtactgcgccgcgtcggaggacctctcctgcgcgtactgggccgtctccga 389 Query: 457 cgccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtctt 516 |||||||||||||||||| |||||||||||||||| ||| |||||||||||||||||||| Sbjct: 388 cgccttctgcttggccgcatcggttgcctcggcggtcttctgcttggccgcctccgtctt 329 Query: 517 ctcgccgaggaagctccccgtctggtccttgctctcggcggcgcggtccttggccgcctg 576 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 328 ctcgccgaggaagctgccggtctggtccttgctctcggcggcgcggtccttggccgcctg 269 Query: 577 cgccgtctgtgccgtcttgtccttggcctcgccggccttctgcttggtggccctccgtgg 636 ||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 268 cgccgtctgggccgtcttgtccttggcctctccggccttctgcttggtgg-cctccgtgg 210 Query: 637 cc 638 || Sbjct: 209 cc 208 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/49 (91%), Gaps = 2/49 (4%) Strand = Plus / Minus Query: 62 gtaactcattacagaaccggacacgagta--ccatcaaatcaaaggcaa 108 ||||||||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 788 gtaactcattacagaaccggacacgagtagtacatcaaatcgaaggcaa 740 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/54 (88%), Gaps = 2/54 (3%) Strand = Plus / Minus Query: 137 ggaaacatacaaatatatgtggaaggcccgcgaacgaccaaacgactaaaggaa 190 |||||||||||||||| || | ||||||||||||||||||||| |||||||| Sbjct: 706 ggaaacatacaaatat--gtaaagggcccgcgaacgaccaaacgagtaaaggaa 655
>gb|AY148491.1| Triticum aestivum LEA2 protein (LEA2) mRNA, complete cds Length = 664 Score = 593 bits (299), Expect = e-166 Identities = 381/407 (93%), Gaps = 1/407 (0%) Strand = Plus / Minus Query: 223 ctagtgatccccggtgatcttcc-cagtggtggtgtccttgctggtgttggtgttgtcac 281 ||||||||||| ||||||||| | | ||||||||||||||| ||||||||||||||| | Sbjct: 544 ctagtgatccctggtgatctttctcggtggtggtgtccttggcggtgttggtgttgtcgc 485 Query: 282 cgcccatgcccagcgtgttggccacggcgtccttggcgcccaccacggcgttcaccaccg 341 ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 484 cgcccatgcccagcgtgttcgccaccgcgtccttggcgcccaccacggcgttcaccaccg 425 Query: 342 tctcgccggcctgctggagggcgctgccggtcttgtccttgccggcgacggcggactcct 401 |||||| |||||||||||| ||| || |||||||||||||||||||||||| || |||| Sbjct: 424 tctcgctggcctgctggagcacgccgctggtcttgtccttgccggcgacggctgattcct 365 Query: 402 tggtgtactgcgcggcgtcggaggacctctcctgcgcgtactgcgccgtctccgacgcct 461 |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct: 364 tggtgtactgtgcggcgtcggaggaccgctcctgcgcgtactgcgccgtctccgacgtct 305 Query: 462 tctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttctcgc 521 |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 304 tctgcttggccgcctctgttgcctcggcggccttctgcttggccgcctccgtcttctcgc 245 Query: 522 cgaggaagctccccgtctggtccttgctctcggcggcgcggtccttggccgcctgcgccg 581 |||||||||| || ||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 244 cgaggaagctgcctgtctggtccttgctctcggcggcgcggtccttggctgcctgtgccg 185 Query: 582 tctgtgccgtcttgtccttggcctcgccggccttctgcttggtggcc 628 |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 tctgcgccgtcttgtccttggcctcgccggccttctgcttggtggcc 138 Score = 56.0 bits (28), Expect = 2e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 159 aaggcccgcgaacgaccaaacgactaaaggaa 190 ||||||||||||||||||||||| |||||||| Sbjct: 585 aaggcccgcgaacgaccaaacgagtaaaggaa 554 Score = 46.1 bits (23), Expect = 0.14 Identities = 33/35 (94%), Gaps = 1/35 (2%) Strand = Plus / Minus Query: 604 ctcgccggccttctgcttggtggccctccgtggcc 638 |||||||||||||||||| |||| ||||||||||| Sbjct: 129 ctcgccggccttctgcttagtgg-cctccgtggcc 96
>gb|AF255052.1|AF255052 Triticum aestivum cold-responsive LEA/RAB-related COR protein (Wrab19) mRNA, complete cds Length = 698 Score = 587 bits (296), Expect = e-164 Identities = 361/382 (94%), Gaps = 3/382 (0%) Strand = Plus / Minus Query: 248 gtggtggtgtccttgctggtgttggtgttgtcaccgcccatgcccagcgtgttggccacg 307 ||||||||||||||| ||||| | |||||||| ||||||||||||||||| |||||| Sbjct: 593 gtggtggtgtccttggtggtg---gcattgtcaccacccatgcccagcgtgttcgccacg 537 Query: 308 gcgtccttggcgcccaccacggcgttcaccaccgtctcgccggcctgctggagggcgctg 367 |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| Sbjct: 536 gcgtccttggcgcccaccacggcgcccaccaccgtctcgccggcctgctggagcacgctg 477 Query: 368 ccggtcttgtccttgccggcgacggcggactccttggtgtactgcgcggcgtcggaggac 427 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 476 ccggtcttgtccttgccggccacggcggactccttggtgtactgcgcggcgtcggaggac 417 Query: 428 ctctcctgcgcgtactgcgccgtctccgacgccttctgcttggccgcctcggttgcctcg 487 |||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||| Sbjct: 416 ctctcctgcgcgtactgcgccgcctccgacgccttctgcttggccgcctcggccgtctcg 357 Query: 488 gcggccttgtgcttggccgcctccgtcttctcgccgaggaagctccccgtctggtccttg 547 |||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 356 gcggccttctgcttggccgcctccgtcttctcgccgaggaagctgccggtctggtccttg 297 Query: 548 ctctcggcggcgcggtccttggccgcctgcgccgtctgtgccgtcttgtccttggcctcg 607 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 296 ctctcggcggcgcggtccttggccgcctgcgccgtctgggccgtcttgtccttggcctcg 237 Query: 608 ccggccttctgcttggtggccc 629 |||||||||||||||||||||| Sbjct: 236 ccggccttctgcttggtggccc 215 Score = 44.1 bits (22), Expect = 0.57 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 609 cggccttctgcttggtggccctccgtggcc 638 |||||||||||||||||| ||||||||||| Sbjct: 202 cggccttctgcttggtgg-cctccgtggcc 174
>gb|AF139915.1|AF139915 Triticum aestivum ABA-inducible protein WRAB1 mRNA, complete cds Length = 698 Score = 587 bits (296), Expect = e-164 Identities = 361/382 (94%), Gaps = 3/382 (0%) Strand = Plus / Minus Query: 248 gtggtggtgtccttgctggtgttggtgttgtcaccgcccatgcccagcgtgttggccacg 307 ||||||||||||||| ||||| | |||||||| ||||||||||||||||| |||||| Sbjct: 593 gtggtggtgtccttggtggtg---gcattgtcaccacccatgcccagcgtgttcgccacg 537 Query: 308 gcgtccttggcgcccaccacggcgttcaccaccgtctcgccggcctgctggagggcgctg 367 |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| Sbjct: 536 gcgtccttggcgcccaccacggcgcccaccaccgtctcgccggcctgctggagcacgctg 477 Query: 368 ccggtcttgtccttgccggcgacggcggactccttggtgtactgcgcggcgtcggaggac 427 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 476 ccggtcttgtccttgccggccacggcggactccttggtgtactgcgcggcgtcggaggac 417 Query: 428 ctctcctgcgcgtactgcgccgtctccgacgccttctgcttggccgcctcggttgcctcg 487 |||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||| Sbjct: 416 ctctcctgcgcgtactgcgccgcctccgacgccttctgcttggccgcctcggccgtctcg 357 Query: 488 gcggccttgtgcttggccgcctccgtcttctcgccgaggaagctccccgtctggtccttg 547 |||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 356 gcggccttctgcttggccgcctccgtcttctcgccgaggaagctgccggtctggtccttg 297 Query: 548 ctctcggcggcgcggtccttggccgcctgcgccgtctgtgccgtcttgtccttggcctcg 607 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 296 ctctcggcggcgcggtccttggccgcctgcgccgtctgggccgtcttgtccttggcctcg 237 Query: 608 ccggccttctgcttggtggccc 629 |||||||||||||||||||||| Sbjct: 236 ccggccttctgcttggtggccc 215 Score = 44.1 bits (22), Expect = 0.57 Identities = 29/30 (96%), Gaps = 1/30 (3%) Strand = Plus / Minus Query: 609 cggccttctgcttggtggccctccgtggcc 638 |||||||||||||||||| ||||||||||| Sbjct: 202 cggccttctgcttggtgg-cctccgtggcc 174
>dbj|AB181486.1| Bromus inermis BiLEA2 mRNA for LEA protein, complete cds Length = 866 Score = 385 bits (194), Expect = e-103 Identities = 285/314 (90%), Gaps = 1/314 (0%) Strand = Plus / Minus Query: 272 gtgttgtcaccgcccatgcccagcgtgttggccacggcgtccttggcgcccaccacggcg 331 |||||||| |||||||||||||||||||| ||||||||||||||||| ||||| || || Sbjct: 635 gtgttgtccccgcccatgcccagcgtgttagccacggcgtccttggcacccacgaccacg 576 Query: 332 ttcaccaccgtctcgccggcctgctggagggcgctgccggt-cttgtccttgccggcgac 390 || ||||||||||||||||||||| ||| ||| | |||| |||||||||||||||||| Sbjct: 575 tttttcaccgtctcgccggcctgctgcaggacgccggcggttcttgtccttgccggcgac 516 Query: 391 ggcggactccttggtgtactgcgcggcgtcggaggacctctcctgcgcgtactgcgccgt 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 515 ggcggactccttggtgtactgcgcggcgtcggaggacctctcctgcgcgtactgcgccgt 456 Query: 451 ctccgacgccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctc 510 ||| |||||||||||||| |||||||| || | |||||||||||| ||||| |||||||| Sbjct: 455 ctcggacgccttctgctttgccgcctccgtggtctcggcggccttctgcttcgccgcctc 396 Query: 511 cgtcttctcgccgaggaagctccccgtctggtccttgctctcggcggcgcggtccttggc 570 ||||||||||||||||| ||| || ||||||||||||||| |||||||| |||||||| Sbjct: 395 cgtcttctcgccgaggacgctgccggtctggtccttgctcagagcggcgcgctccttggc 336 Query: 571 cgcctgcgccgtct 584 |||||||| ||||| Sbjct: 335 cgcctgcgtcgtct 322 Score = 109 bits (55), Expect = 1e-20 Identities = 61/63 (96%) Strand = Plus / Minus Query: 563 tccttggccgcctgcgccgtctgtgccgtcttgtccttggcctcgccggccttctgcttg 622 ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 310 tccttggccgcctgcgccgtctgcgccgtcttgtccttggcctcggcggccttctgcttg 251 Query: 623 gtg 625 ||| Sbjct: 250 gtg 248 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 604 ctcgccggccttctgcttggtggcc 628 ||||||||||||||||||||||||| Sbjct: 236 ctcgccggccttctgcttggtggcc 212 Score = 48.1 bits (24), Expect = 0.037 Identities = 30/32 (93%) Strand = Plus / Minus Query: 167 cgaacgaccaaacgactaaaggaaagcaaatt 198 ||||| ||||||| |||||||||||||||||| Sbjct: 772 cgaacaaccaaacaactaaaggaaagcaaatt 741
>gb|AY148490.1| Triticum aestivum LEA1 protein (LEA1) mRNA, complete cds Length = 843 Score = 283 bits (143), Expect = 4e-73 Identities = 161/167 (96%) Strand = Plus / Minus Query: 248 gtggtggtgtccttgctggtgttggtgttgtcaccgcccatgcccagcgtgttggccacg 307 |||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 652 gtggtgttgtccttggtggtgttggtgttgtccccgcccatgcccagcgtgttggccacg 593 Query: 308 gcgtccttggcgcccaccacggcgttcaccaccgtctcgccggcctgctggagggcgctg 367 |||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||| Sbjct: 592 gcgtccttggcgcccaccacggcgttcaccaccgtctcccctgcctgctggaggacgctg 533 Query: 368 ccggtcttgtccttgccggcgacggcggactccttggtgtactgcgc 414 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 532 ccggtcttgtccttgccggcgacggcggactccttggtgtactgcgc 486 Score = 141 bits (71), Expect = 3e-30 Identities = 113/127 (88%) Strand = Plus / Minus Query: 458 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 517 ||||||||| |||||||||| || | |||||||||||| ||||||||||||||||||||| Sbjct: 442 gccttctgcctggccgcctccgtggtctcggcggccttctgcttggccgcctccgtcttc 383 Query: 518 tcgccgaggaagctccccgtctggtccttgctctcggcggcgcggtccttggccgcctgc 577 ||||||||| ||| | ||||||||||||| || ||||||||| |||||||||| |||| Sbjct: 382 tcgccgagggtgctggcggtctggtccttgccctgggcggcgcgctccttggccgactgc 323 Query: 578 gccgtct 584 ||||||| Sbjct: 322 gccgtct 316 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Minus Query: 439 gtactgcgccgtctccgacgccttctgcttggccgcctcggttgcctcggcggccttgtg 498 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 494 gtactgcgccgtctccgacgccttctgcttggccgcctcggtcgcctcggcggccttctg 435 Query: 499 cttggccgcctccgt 513 | ||||||||||||| Sbjct: 434 cctggccgcctccgt 420 Score = 115 bits (58), Expect = 2e-22 Identities = 64/66 (96%) Strand = Plus / Minus Query: 563 tccttggccgcctgcgccgtctgtgccgtcttgtccttggcctcgccggccttctgcttg 622 ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 304 tccttggccgcctgcgccgtctgcgccgtcttgtccttggcctcggcggccttctgcttg 245 Query: 623 gtggcc 628 |||||| Sbjct: 244 gtggcc 239 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/50 (94%), Gaps = 2/50 (4%) Strand = Plus / Minus Query: 130 aaagagtggaaacatacaaatatatgtggaaggcccgcgaacgaccaaac 179 ||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 785 aaagagtggaaacatacaaatat--gtagaaggcccgcgaacgaccaaac 738 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 458 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 517 |||||||||||||||||||| || | |||||||||||| ||||| | |||||||| || Sbjct: 223 gccttctgcttggccgcctccgtggtctcggcggccttctgcttcgtggcctccgtggtc 164 Query: 518 tcgccg 523 |||||| Sbjct: 163 tcgccg 158 Score = 48.1 bits (24), Expect = 0.037 Identities = 48/56 (85%) Strand = Plus / Minus Query: 458 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgt 513 ||||||||||||| ||||||| | |||| |||||| ||||||||||||||||| Sbjct: 256 gccttctgcttggtggcctcggccgtctcgctggccttctgcttggccgcctccgt 201 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 604 ctcgccggccttctgcttggtggcc 628 |||||||||||||||||| |||||| Sbjct: 164 ctcgccggccttctgcttcgtggcc 140 Score = 40.1 bits (20), Expect = 8.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 441 actgcgccgtctccgacgccttctgcttggccgcct 476 ||||||||||||| ||| ||||| ||||||||||| Sbjct: 327 actgcgccgtctcgtacgtcttctccttggccgcct 292
>emb|X56882.1|TA3LEA Wheat mRNA for a group 3 late embryogenesis abundant protein (LEA) Length = 934 Score = 268 bits (135), Expect = 2e-68 Identities = 159/167 (95%) Strand = Plus / Minus Query: 248 gtggtggtgtccttgctggtgttggtgttgtcaccgcccatgcccagcgtgttggccacg 307 |||||| |||||||| ||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 653 gtggtgttgtccttggtggtgatggtgttgtccccgcccatgcccagcgtgttggccacg 594 Query: 308 gcgtccttggcgcccaccacggcgttcaccaccgtctcgccggcctgctggagggcgctg 367 |||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||| Sbjct: 593 gcgtccttggcgcccaccacggcgttcaccaccgtctcccctgcctgctggaggacgctg 534 Query: 368 ccggtcttgtccttgccggcgacggcggactccttggtgtactgcgc 414 ||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 533 ccggtcttgtccttgccggtgacggcggactccttggtgtactgcgc 487 Score = 141 bits (71), Expect = 3e-30 Identities = 113/127 (88%) Strand = Plus / Minus Query: 458 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 517 ||||||||| |||||||||| || | |||||||||||| ||||||||||||||||||||| Sbjct: 443 gccttctgcctggccgcctccgtggtctcggcggccttctgcttggccgcctccgtcttc 384 Query: 518 tcgccgaggaagctccccgtctggtccttgctctcggcggcgcggtccttggccgcctgc 577 ||||||||| ||| | ||||||||||||| || ||||||||| |||||||||| |||| Sbjct: 383 tcgccgagggtgctggcggtctggtccttgccctgggcggcgcgctccttggccgactgc 324 Query: 578 gccgtct 584 ||||||| Sbjct: 323 gccgtct 317 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Minus Query: 439 gtactgcgccgtctccgacgccttctgcttggccgcctcggttgcctcggcggccttgtg 498 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct: 495 gtactgcgccgtctccgacgccttctgcttggccgcctcggtcgcctcggcggccttctg 436 Query: 499 cttggccgcctccgt 513 | ||||||||||||| Sbjct: 435 cctggccgcctccgt 421 Score = 115 bits (58), Expect = 2e-22 Identities = 64/66 (96%) Strand = Plus / Minus Query: 563 tccttggccgcctgcgccgtctgtgccgtcttgtccttggcctcgccggccttctgcttg 622 ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 305 tccttggccgcctgcgccgtctgcgccgtcttgtccttggcctcggcggccttctgcttg 246 Query: 623 gtggcc 628 |||||| Sbjct: 245 gtggcc 240 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/71 (90%), Gaps = 4/71 (5%) Strand = Plus / Minus Query: 130 aaagagtggaaacatacaaatatatgtggaaggcccgcgaacgaccaa--acgactaaag 187 ||||||||||||||||||||||| || |||||||||||||||||||| || ||||||| Sbjct: 786 aaagagtggaaacatacaaatat--gtagaaggcccgcgaacgaccaaacactactaaag 729 Query: 188 gaaagcaaatt 198 |||||||||| Sbjct: 728 caaagcaaatt 718 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 458 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 517 |||||||||||||||||||| || | |||||||||||| ||||| | |||||||| || Sbjct: 224 gccttctgcttggccgcctccgtggtctcggcggccttctgcttcgtggcctccgtggtc 165 Query: 518 tcgccg 523 |||||| Sbjct: 164 tcgccg 159 Score = 48.1 bits (24), Expect = 0.037 Identities = 48/56 (85%) Strand = Plus / Minus Query: 458 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgt 513 ||||||||||||| ||||||| | |||| |||||| ||||||||||||||||| Sbjct: 257 gccttctgcttggtggcctcggccgtctcgctggccttctgcttggccgcctccgt 202 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 604 ctcgccggccttctgcttggtggcc 628 |||||||||||||||||| |||||| Sbjct: 165 ctcgccggccttctgcttcgtggcc 141 Score = 40.1 bits (20), Expect = 8.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 441 actgcgccgtctccgacgccttctgcttggccgcct 476 ||||||||||||| ||| ||||| ||||||||||| Sbjct: 328 actgcgccgtctcgtacgtcttctccttggccgcct 293
>emb|X13498.1|HVABAIP Barley pHVA1 mRNA for an ABA-inducible protein Length = 997 Score = 254 bits (128), Expect = 3e-64 Identities = 164/176 (93%) Strand = Plus / Minus Query: 248 gtggtggtgtccttgctggtgttggtgttgtcaccgcccatgcccagcgtgttggccacg 307 ||||||| ||||||| ||| | |||||||||| || ||||||||||||||||| |||||| Sbjct: 715 gtggtggcgtccttggtggcgctggtgttgtcccctcccatgcccagcgtgtttgccacg 656 Query: 308 gcgtccttggcgcccaccacggcgttcaccaccgtctcgccggcctgctggagggcgctg 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 655 gcgtccttggcgcccaccacggcgttcaccaccgtctcgccggcctgctggaggacgctg 596 Query: 368 ccggtcttgtccttgccggcgacggcggactccttggtgtactgcgcggcgtcgga 423 |||||||||||||||||||| || ||||||||||||||||||||||| | |||||| Sbjct: 595 ccggtcttgtccttgccggccaccgcggactccttggtgtactgcgccgtgtcgga 540 Score = 172 bits (87), Expect = 9e-40 Identities = 132/147 (89%) Strand = Plus / Minus Query: 458 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 517 |||||||||||||||||||| || | |||||||||||| ||||||||||||||||||||| Sbjct: 505 gccttctgcttggccgcctccgtcgtctcggcggccttctgcttggccgcctccgtcttc 446 Query: 518 tcgccgaggaagctccccgtctggtccttgctctcggcggcgcggtccttggccgcctgc 577 ||||||||| ||| || ||||||||||||| || ||||||||| ||||||||||||||| Sbjct: 445 tcgccgagggcgctgccggtctggtccttgccctgggcggcgcgctccttggccgcctgc 386 Query: 578 gccgtctgtgccgtcttgtccttggcc 604 ||||||| |||||||||||||||| Sbjct: 385 gccgtctcgtacgtcttgtccttggcc 359 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Minus Query: 439 gtactgcgccgtctccgacgccttctgcttggccgcctcggttgcctcggcggccttgtg 498 |||||||||||| || ||||||||||||||||||||||||||||||||||||||||| || Sbjct: 557 gtactgcgccgtgtcggacgccttctgcttggccgcctcggttgcctcggcggccttctg 498 Query: 499 cttggccgcctccgtcttctcg 520 |||||||||||||||| ||||| Sbjct: 497 cttggccgcctccgtcgtctcg 476 Score = 109 bits (55), Expect = 1e-20 Identities = 64/67 (95%) Strand = Plus / Minus Query: 562 gtccttggccgcctgcgccgtctgtgccgtcttgtccttggcctcgccggccttctgctt 621 |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 368 gtccttggccgcctgcgccgtctgcgccgtcttgtccttggcctcggcggccttctgctt 309 Query: 622 ggtggcc 628 || |||| Sbjct: 308 ggcggcc 302 Score = 60.0 bits (30), Expect = 1e-05 Identities = 70/82 (85%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 19 ttcgactgtcctcgttatccatctacatcgaagtacattgatcgtaactcattacagaac 78 ||||| |||||||||||||||| |||| | ||| ||| ||| |||||||||||||||| Sbjct: 971 ttcgagtgtcctcgttatccatttacaccaaagcccatggattataactcattacagaac 912 Query: 79 cggacacgagtaccatcaaatc 100 | || ||||||| ||||||||| Sbjct: 911 cagagacgagta-catcaaatc 891 Score = 60.0 bits (30), Expect = 1e-05 Identities = 89/108 (82%), Gaps = 13/108 (12%) Strand = Plus / Minus Query: 130 aaagagtggaaacatacaaat-----atatgtggaaggcccgcgaacgaccaa--acgac 182 ||||||||||||||||||||| |||||| |||||||| ||||||||||| ||||| Sbjct: 855 aaagagtggaaacatacaaatatgaaatatgtagaaggccctcgaacgaccaaacacgac 796 Query: 183 taaaggaaagcaaatttaaactgagcgcgaatgcatgcgtctagtgat 230 |||||||| | |||| | |||||||| |||||||||||||||| Sbjct: 795 taaaggaacggaaat------taagcgcgaacgcatgcgtctagtgat 754 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 604 ctcgccggccttctgcttggtggcc 628 ||||||||||||||||||||||||| Sbjct: 260 ctcgccggccttctgcttggtggcc 236 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 358 gagggcgctgccggtcttgtccttgcc 384 ||||||||||||||||| ||||||||| Sbjct: 440 gagggcgctgccggtctggtccttgcc 414 Score = 44.1 bits (22), Expect = 0.57 Identities = 37/42 (88%) Strand = Plus / Minus Query: 482 gcctcggcggccttgtgcttggccgcctccgtcttctcgccg 523 |||||||||||||| |||||||| ||||| | | |||||||| Sbjct: 328 gcctcggcggccttctgcttggcggcctcggccgtctcgccg 287 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 604 ctcgccggccttctgcttggtggcc 628 |||||||| |||||||||||||||| Sbjct: 293 ctcgccggtcttctgcttggtggcc 269
>emb|X78205.1|HVHVA1 H.vulgare (Himalaya) HVA1 gene Length = 1804 Score = 254 bits (128), Expect = 3e-64 Identities = 164/176 (93%) Strand = Plus / Minus Query: 248 gtggtggtgtccttgctggtgttggtgttgtcaccgcccatgcccagcgtgttggccacg 307 ||||||| ||||||| ||| | |||||||||| || ||||||||||||||||| |||||| Sbjct: 1194 gtggtggcgtccttggtggcgctggtgttgtcccctcccatgcccagcgtgtttgccacg 1135 Query: 308 gcgtccttggcgcccaccacggcgttcaccaccgtctcgccggcctgctggagggcgctg 367 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1134 gcgtccttggcgcccaccacggcgttcaccaccgtctcgccggcctgctggaggacgctg 1075 Query: 368 ccggtcttgtccttgccggcgacggcggactccttggtgtactgcgcggcgtcgga 423 |||||||||||||||||||| || ||||||||||||||||||||||| | |||||| Sbjct: 1074 ccggtcttgtccttgccggccaccgcggactccttggtgtactgcgccgtgtcgga 1019 Score = 172 bits (87), Expect = 9e-40 Identities = 132/147 (89%) Strand = Plus / Minus Query: 458 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 517 |||||||||||||||||||| || | |||||||||||| ||||||||||||||||||||| Sbjct: 984 gccttctgcttggccgcctccgtcgtctcggcggccttctgcttggccgcctccgtcttc 925 Query: 518 tcgccgaggaagctccccgtctggtccttgctctcggcggcgcggtccttggccgcctgc 577 ||||||||| ||| || ||||||||||||| || ||||||||| ||||||||||||||| Sbjct: 924 tcgccgagggcgctgccggtctggtccttgccctgggcggcgcgctccttggccgcctgc 865 Query: 578 gccgtctgtgccgtcttgtccttggcc 604 ||||||| |||||||||||||||| Sbjct: 864 gccgtctcgtacgtcttgtccttggcc 838 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Minus Query: 439 gtactgcgccgtctccgacgccttctgcttggccgcctcggttgcctcggcggccttgtg 498 |||||||||||| || ||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1036 gtactgcgccgtgtcggacgccttctgcttggccgcctcggttgcctcggcggccttctg 977 Query: 499 cttggccgcctccgtcttctcg 520 |||||||||||||||| ||||| Sbjct: 976 cttggccgcctccgtcgtctcg 955 Score = 109 bits (55), Expect = 1e-20 Identities = 64/67 (95%) Strand = Plus / Minus Query: 562 gtccttggccgcctgcgccgtctgtgccgtcttgtccttggcctcgccggccttctgctt 621 |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct: 847 gtccttggccgcctgcgccgtctgcgccgtcttgtccttggcctcggcggccttctgctt 788 Query: 622 ggtggcc 628 || |||| Sbjct: 787 ggcggcc 781 Score = 60.0 bits (30), Expect = 1e-05 Identities = 70/82 (85%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 19 ttcgactgtcctcgttatccatctacatcgaagtacattgatcgtaactcattacagaac 78 ||||| |||||||||||||||| |||| | ||| ||| ||| |||||||||||||||| Sbjct: 1450 ttcgagtgtcctcgttatccatttacaccaaagcccatggattataactcattacagaac 1391 Query: 79 cggacacgagtaccatcaaatc 100 | || ||||||| ||||||||| Sbjct: 1390 cagagacgagta-catcaaatc 1370 Score = 60.0 bits (30), Expect = 1e-05 Identities = 89/108 (82%), Gaps = 13/108 (12%) Strand = Plus / Minus Query: 130 aaagagtggaaacatacaaat-----atatgtggaaggcccgcgaacgaccaa--acgac 182 ||||||||||||||||||||| |||||| |||||||| ||||||||||| ||||| Sbjct: 1334 aaagagtggaaacatacaaatatgaaatatgtagaaggccctcgaacgaccaaacacgac 1275 Query: 183 taaaggaaagcaaatttaaactgagcgcgaatgcatgcgtctagtgat 230 |||||||| | |||| | |||||||| |||||||||||||||| Sbjct: 1274 taaaggaacggaaat------taagcgcgaacgcatgcgtctagtgat 1233 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 604 ctcgccggccttctgcttggtggcc 628 ||||||||||||||||||||||||| Sbjct: 739 ctcgccggccttctgcttggtggcc 715 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 358 gagggcgctgccggtcttgtccttgcc 384 ||||||||||||||||| ||||||||| Sbjct: 919 gagggcgctgccggtctggtccttgcc 893 Score = 44.1 bits (22), Expect = 0.57 Identities = 37/42 (88%) Strand = Plus / Minus Query: 482 gcctcggcggccttgtgcttggccgcctccgtcttctcgccg 523 |||||||||||||| |||||||| ||||| | | |||||||| Sbjct: 807 gcctcggcggccttctgcttggcggcctcggccgtctcgccg 766 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 604 ctcgccggccttctgcttggtggcc 628 |||||||| |||||||||||||||| Sbjct: 772 ctcgccggtcttctgcttggtggcc 748
>gb|AY148492.1| Triticum aestivum LEA3 protein (LEA3) mRNA, complete cds Length = 776 Score = 250 bits (126), Expect = 5e-63 Identities = 174/190 (91%) Strand = Plus / Minus Query: 439 gtactgcgccgtctccgacgccttctgcttggccgcctcggttgcctcggcggccttgtg 498 |||||||||||||||||| |||||||||||||| |||||||| | |||||||||||| || Sbjct: 438 gtactgcgccgtctccgaggccttctgcttggcagcctcggtcgtctcggcggccttctg 379 Query: 499 cttggccgcctccgtcttctcgccgaggaagctccccgtctggtccttgctctcggcggc 558 ||||||| ||| ||||||||||||||| |||| || |||||||||||| |||||||||| Sbjct: 378 cttggccatctctgtcttctcgccgaggtagctgccggtctggtccttggtctcggcggc 319 Query: 559 gcggtccttggccgcctgcgccgtctgtgccgtcttgtccttggcctcgccggccttctg 618 ||| ||||||||||||||||||||||| || |||||||||||||||||| |||||||||| Sbjct: 318 gcgctccttggccgcctgcgccgtctgcgcagtcttgtccttggcctcggcggccttctg 259 Query: 619 cttggtggcc 628 |||||||||| Sbjct: 258 cttggtggcc 249 Score = 200 bits (101), Expect = 4e-48 Identities = 121/127 (95%), Gaps = 3/127 (2%) Strand = Plus / Minus Query: 288 tgcccagcgtgttggccacggcgtccttggcgcccaccacggcgttcaccaccgtctcgc 347 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 553 tgcccagcgtgttggccacggcgtccttggcgccatccacggcgttcaccaccgtctcgc 494 Query: 348 cggcctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgt 407 |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 493 cggcctgctggaggacgctgccggtcttgtccttgccggcga---cggactccttggtgt 437 Query: 408 actgcgc 414 ||||||| Sbjct: 436 actgcgc 430 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/70 (92%), Gaps = 4/70 (5%) Strand = Plus / Minus Query: 130 aaagagtggaaacatacaaatatatgtggaaggcccgcgaacgaccaaac--gactaaag 187 ||||||||||||||||||||||| || |||||||||||||||||||||| |||||||| Sbjct: 722 aaagagtggaaacatacaaatat--gtcgaaggcccgcgaacgaccaaacaggactaaag 665 Query: 188 gaaagcaaat 197 |||||||||| Sbjct: 664 gaaagcaaat 655 Score = 54.0 bits (27), Expect = 6e-04 Identities = 46/51 (90%), Gaps = 1/51 (1%) Strand = Plus / Minus Query: 604 ctcgccggccttctgcttggtggccctccgtggcccggccagccttctgct 654 |||||||||||||||||| |||| ||||||||||| | || |||||||||| Sbjct: 240 ctcgccggccttctgcttcgtgg-cctccgtggcctgaccggccttctgct 191 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 604 ctcgccggccttctgcttggtggcc 628 ||||||||||||||||||||||||| Sbjct: 174 ctcgccggccttctgcttggtggcc 150 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 608 ccggccttctgcttggtggcc 628 ||||||||||||||||||||| Sbjct: 137 ccggccttctgcttggtggcc 117
>dbj|AB181485.1| Bromus inermis BiLEA1 mRNA for LEA protein, complete cds Length = 855 Score = 157 bits (79), Expect = 6e-35 Identities = 175/207 (84%) Strand = Plus / Minus Query: 273 tgttgtcaccgcccatgcccagcgtgttggccacggcgtccttggcgcccaccacggcgt 332 ||||||| || ||||| ||||||||||||||||| ||||| |||||||| ||||| ||| Sbjct: 572 tgttgtctccccccatccccagcgtgttggccaccgcgtctttggcgccaaccaccacgt 513 Query: 333 tcaccaccgtctcgccggcctgctggagggcgctgccggtcttgtccttgccggcgacgg 392 || |||| |||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 512 tcttcacctgctcgccggcctgagcgaggacgctgccggtcttgtccttgccggcgacgg 453 Query: 393 cggactccttggtgtactgcgcggcgtcggaggacctctcctgcgcgtactgcgccgtct 452 |||| ||||| ||||||||||| ||||||| || ||| ||||||| |||| || || || Sbjct: 452 cggagtccttcgtgtactgcgccgcgtcggcggccctgtcctgcgtgtaccccgtcgcct 393 Query: 453 ccgacgccttctgcttggccgcctcgg 479 || ||||||| |||||| ||||||| Sbjct: 392 gggaggccttctccttggcggcctcgg 366 Score = 93.7 bits (47), Expect = 7e-16 Identities = 116/139 (83%) Strand = Plus / Minus Query: 490 ggccttgtgcttggccgcctccgtcttctcgccgaggaagctccccgtctggtccttgct 549 |||||| | |||||| ||||| | | ||| ||||||| |||| || | ||||||||||| Sbjct: 388 ggccttctccttggcggcctcggccgtctggccgaggtagctgccggcctggtccttgcc 329 Query: 550 ctcggcggcgcggtccttggccgcctgcgccgtctgtgccgtcttgtccttggcctcgcc 609 ||||||||| ||||||||||| ||||||||||||| | |||||| | | |||||||| Sbjct: 328 ctcggcggcccggtccttggcggcctgcgccgtctcggacgtcttctgccccgcctcgcc 269 Query: 610 ggccttctgcttggtggcc 628 |||||||||||| |||||| Sbjct: 268 ggccttctgcttcgtggcc 250
>emb|Z68090.1|OSLEA3X1 O.sativa mRNA for group 3 LEA (type I) protein Length = 966 Score = 103 bits (52), Expect = 7e-19 Identities = 121/144 (84%) Strand = Plus / Minus Query: 439 gtactgcgccgtctccgacgccttctgcttggccgcctcggttgcctcggcggccttgtg 498 ||||||||||||||| | | |||||||||||| || | | | |||||||||||| || Sbjct: 475 gtactgcgccgtctcggcggtcttctgcttggcggcgccagcggtctcggcggccttctg 416 Query: 499 cttggccgcctccgtcttctcgccgaggaagctccccgtctggtccttgctctcggcggc 558 ||||||| ||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 415 cttggcctgctcggtcttctcgccgaggaagccgccggtctggtccttgctctcggcggc 356 Query: 559 gcggtccttggccgcctgcgccgt 582 |||| | |||||||||||||| Sbjct: 355 tttgtccctcgccgcctgcgccgt 332 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 350 gcctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtac 409 ||||| |||||| ||||||||||||||||||||||||||| ||| || |||||||||||| Sbjct: 531 gcctgttggaggacgctgccggtcttgtccttgccggcgatggcagagtccttggtgtac 472 Query: 410 tgcgc 414 ||||| Sbjct: 471 tgcgc 467 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 442 ctgcgccgtctccgacgccttctgcttggccgcct 476 ||||||||||||||||||| ||| ||| ||||||| Sbjct: 307 ctgcgccgtctccgacgccctctccttcgccgcct 273
>gb|AC104713.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_G11, complete sequence Length = 115808 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Minus Query: 439 gtactgcgccgtctccgacgccttctgcttggccgcctcggttgcctcggcggccttgtg 498 ||||||||||||||| | | |||||||||||| || | | | |||||||||||| || Sbjct: 102400 gtactgcgccgtctcggcggtcttctgcttggcggcgccagcggtctcggcggccttctg 102341 Query: 499 cttggccgcctccgtcttctcgccgaggaagctccccgtctggtccttgctctcggcggc 558 ||||||| ||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 102340 cttggcctgctcggtcttctcgccgaggaagccgccggtctggtccttgctctcggcggc 102281 Score = 87.7 bits (44), Expect = 4e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 351 cctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtact 410 |||| |||||| ||||||||||||||||||||||||||| ||| || ||||||||||||| Sbjct: 102455 cctgttggaggacgctgccggtcttgtccttgccggcgatggcagagtccttggtgtact 102396 Query: 411 gcgc 414 |||| Sbjct: 102395 gcgc 102392 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 442 ctgcgccgtctccgacgccttctgcttggccgcct 476 ||||||||||||||||||| ||| ||| ||||||| Sbjct: 102232 ctgcgccgtctccgacgccctctccttcgccgcct 102198
>ref|XM_475821.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 603 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Minus Query: 439 gtactgcgccgtctccgacgccttctgcttggccgcctcggttgcctcggcggccttgtg 498 ||||||||||||||| | | |||||||||||| || | | | |||||||||||| || Sbjct: 393 gtactgcgccgtctcggcggtcttctgcttggcggcgccagcggtctcggcggccttctg 334 Query: 499 cttggccgcctccgtcttctcgccgaggaagctccccgtctggtccttgctctcggcggc 558 ||||||| ||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 333 cttggcctgctcggtcttctcgccgaggaagccgccggtctggtccttgctctcggcggc 274 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 350 gcctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtac 409 ||||| |||||| ||||||||||||||||||||||||||| ||| || |||||||||||| Sbjct: 449 gcctgttggaggacgctgccggtcttgtccttgccggcgatggcagagtccttggtgtac 390 Query: 410 tgcgc 414 ||||| Sbjct: 389 tgcgc 385 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 442 ctgcgccgtctccgacgccttctgcttggccgcct 476 ||||||||||||||||||| ||| ||| ||||||| Sbjct: 225 ctgcgccgtctccgacgccctctccttcgccgcct 191
>gb|AC098833.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1288_A07, complete sequence Length = 122120 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Minus Query: 439 gtactgcgccgtctccgacgccttctgcttggccgcctcggttgcctcggcggccttgtg 498 ||||||||||||||| | | |||||||||||| || | | | |||||||||||| || Sbjct: 3342 gtactgcgccgtctcggcggtcttctgcttggcggcgccagcggtctcggcggccttctg 3283 Query: 499 cttggccgcctccgtcttctcgccgaggaagctccccgtctggtccttgctctcggcggc 558 ||||||| ||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 3282 cttggcctgctcggtcttctcgccgaggaagccgccggtctggtccttgctctcggcggc 3223 Score = 87.7 bits (44), Expect = 4e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 351 cctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtact 410 |||| |||||| ||||||||||||||||||||||||||| ||| || ||||||||||||| Sbjct: 3397 cctgttggaggacgctgccggtcttgtccttgccggcgatggcagagtccttggtgtact 3338 Query: 411 gcgc 414 |||| Sbjct: 3337 gcgc 3334 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 442 ctgcgccgtctccgacgccttctgcttggccgcct 476 ||||||||||||||||||| ||| ||| ||||||| Sbjct: 3174 ctgcgccgtctccgacgccctctccttcgccgcct 3140
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Minus Query: 439 gtactgcgccgtctccgacgccttctgcttggccgcctcggttgcctcggcggccttgtg 498 ||||||||||||||| | | |||||||||||| || | | | |||||||||||| || Sbjct: 26721403 gtactgcgccgtctcggcggtcttctgcttggcggcgccagcggtctcggcggccttctg 26721344 Query: 499 cttggccgcctccgtcttctcgccgaggaagctccccgtctggtccttgctctcggcggc 558 ||||||| ||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 26721343 cttggcctgctcggtcttctcgccgaggaagccgccggtctggtccttgctctcggcggc 26721284 Score = 87.7 bits (44), Expect = 4e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 351 cctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtact 410 |||| |||||| ||||||||||||||||||||||||||| ||| || ||||||||||||| Sbjct: 26721458 cctgttggaggacgctgccggtcttgtccttgccggcgatggcagagtccttggtgtact 26721399 Query: 411 gcgc 414 |||| Sbjct: 26721398 gcgc 26721395 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 442 ctgcgccgtctccgacgccttctgcttggccgcct 476 ||||||||||||||||||| ||| ||| ||||||| Sbjct: 26721235 ctgcgccgtctccgacgccctctccttcgccgcct 26721201 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 571 cgcctgcgccgtctgtgccg 590 |||||||||||||||||||| Sbjct: 10707932 cgcctgcgccgtctgtgccg 10707951
>dbj|AK119713.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-F03, full insert sequence Length = 968 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Minus Query: 439 gtactgcgccgtctccgacgccttctgcttggccgcctcggttgcctcggcggccttgtg 498 ||||||||||||||| | | |||||||||||| || | | | |||||||||||| || Sbjct: 494 gtactgcgccgtctcggcggtcttctgcttggcggcgccagcggtctcggcggccttctg 435 Query: 499 cttggccgcctccgtcttctcgccgaggaagctccccgtctggtccttgctctcggcggc 558 ||||||| ||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 434 cttggcctgctcggtcttctcgccgaggaagccgccggtctggtccttgctctcggcggc 375 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 350 gcctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtac 409 ||||| |||||| ||||||||||||||||||||||||||| ||| || |||||||||||| Sbjct: 550 gcctgttggaggacgctgccggtcttgtccttgccggcgatggcagagtccttggtgtac 491 Query: 410 tgcgc 414 ||||| Sbjct: 490 tgcgc 486 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 442 ctgcgccgtctccgacgccttctgcttggccgcct 476 ||||||||||||||||||| ||| ||| ||||||| Sbjct: 326 ctgcgccgtctccgacgccctctccttcgccgcct 292
>dbj|AK063984.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-D08, full insert sequence Length = 1277 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Minus Query: 439 gtactgcgccgtctccgacgccttctgcttggccgcctcggttgcctcggcggccttgtg 498 ||||||||||||||| | | |||||||||||| || | | | |||||||||||| || Sbjct: 588 gtactgcgccgtctcggcggtcttctgcttggcggcgccagcggtctcggcggccttctg 529 Query: 499 cttggccgcctccgtcttctcgccgaggaagctccccgtctggtccttgctctcggcggc 558 ||||||| ||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 528 cttggcctgctcggtcttctcgccgaggaagccgccggtctggtccttgctctcggcggc 469 Score = 87.7 bits (44), Expect = 4e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 351 cctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtact 410 |||| |||||| ||||||||||||||||||||||||||| ||| || ||||||||||||| Sbjct: 643 cctgttggaggacgctgccggtcttgtccttgccggcgatggcagagtccttggtgtact 584 Query: 411 gcgc 414 |||| Sbjct: 583 gcgc 580 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 442 ctgcgccgtctccgacgccttctgcttggccgcct 476 ||||||||||||||||||| ||| ||| ||||||| Sbjct: 420 ctgcgccgtctccgacgccctctccttcgccgcct 386
>gb|U57641.1|OSU57641 Oryza sativa LEA-like protein mRNA, embryo-specific clone Ose730, complete cds Length = 953 Score = 95.6 bits (48), Expect = 2e-16 Identities = 102/120 (85%) Strand = Plus / Minus Query: 439 gtactgcgccgtctccgacgccttctgcttggccgcctcggttgcctcggcggccttgtg 498 ||||||||||||||| | | |||||||||||| || | | | |||||||||||| || Sbjct: 460 gtactgcgccgtctcggcggtcttctgcttggcggcgccagcggtctcggcggccttctg 401 Query: 499 cttggccgcctccgtcttctcgccgaggaagctccccgtctggtccttgctctcggcggc 558 ||||||| ||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 400 cttggcctgctcggtcttctcgccgaggaagccgccggtctggtccttgctctcggcggc 341 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 350 gcctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtac 409 ||||| |||||| ||||||||||||||||||||||||||| ||| || |||||||||||| Sbjct: 516 gcctgttggaggacgctgccggtcttgtccttgccggcgatggcagagtccttggtgtac 457 Query: 410 tgcgc 414 ||||| Sbjct: 456 tgcgc 452 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 442 ctgcgccgtctccgacgccttctgcttggccgcct 476 ||||||||||||||||||| ||| ||| ||||||| Sbjct: 292 ctgcgccgtctccgacgccctctccttcgccgcct 258
>gb|AF046884.1|AF046884 Oryza sativa group 3 LEA protein (lea) gene, complete cds Length = 3734 Score = 93.7 bits (47), Expect = 7e-16 Identities = 68/75 (90%) Strand = Plus / Minus Query: 484 ctcggcggccttgtgcttggccgcctccgtcttctcgccgaggaagctccccgtctggtc 543 |||||||||||| ||||||||| ||| ||||||||||||||||||| || |||||||| Sbjct: 2772 ctcggcggccttctgcttggcctgctcggtcttctcgccgaggaagccgccggtctggtc 2713 Query: 544 cttgctctcggcggc 558 ||||||||||||||| Sbjct: 2712 cttgctctcggcggc 2698 Score = 87.7 bits (44), Expect = 4e-14 Identities = 59/64 (92%) Strand = Plus / Minus Query: 351 cctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtact 410 |||| |||||| ||||||||||||||||||||||||||| ||| || ||||||||||||| Sbjct: 2872 cctgttggaggacgctgccggtcttgtccttgccggcgatggcagagtccttggtgtact 2813 Query: 411 gcgc 414 |||| Sbjct: 2812 gcgc 2809
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 484 ctcggcggccttgtgcttggccgcctccgtcttctcgccgaggaagctccccgtctggtc 543 ||||| |||||| ||||||||| ||| ||||||||||||||||||| | |||||||| Sbjct: 495898 ctcggtggccttctgcttggccttctcggtcttctcgccgaggaagccgctagtctggtc 495957 Query: 544 cttgctctcggcggc 558 ||||||||||||||| Sbjct: 495958 cttgctctcggcggc 495972 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 356 tggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtact 410 |||||| |||| ||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 495381 tggaggacgctaccggtcttgtccttgccagcgacggcggattccttggtgtact 495435 Score = 71.9 bits (36), Expect = 3e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 367 gccggtcttgtccttgccggcgacggcggactccttggtgtactgcgcggcg 418 ||||||||||||||||||||||| |||| |||||||| ||||||||||||| Sbjct: 29226786 gccggtcttgtccttgccggcgatcgcggtctccttggcgtactgcgcggcg 29226837
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 484 ctcggcggccttgtgcttggccgcctccgtcttctcgccgaggaagctccccgtctggtc 543 ||||| |||||| ||||||||| ||| ||||||||||||||||||| | |||||||| Sbjct: 136099 ctcggtggccttctgcttggccttctcggtcttctcgccgaggaagccgctagtctggtc 136158 Query: 544 cttgctctcggcggc 558 ||||||||||||||| Sbjct: 136159 cttgctctcggcggc 136173 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 356 tggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtact 410 |||||| |||| ||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 135582 tggaggacgctaccggtcttgtccttgccagcgacggcggattccttggtgtact 135636
>dbj|AK120074.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013007J15, full insert sequence Length = 1459 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 356 tggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtact 410 |||||| |||| ||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 874 tggaggacgctaccggtcttgtccttgccagcgacggcggattccttggtgtact 820 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 484 ctcggcggccttgtgcttggccgcctccgtcttctcgccgaggaagctccccgtctggtc 543 ||||| |||||| ||||||||| ||| ||||||||||||||||||| | |||||||| Sbjct: 357 ctcggtggccttctgcttggccttctcggtcttctcgccgaggaagccgctagtctggtc 298 Query: 544 cttgctctcggcggc 558 ||||||||||||||| Sbjct: 297 cttgctctcggcggc 283
>ref|NM_191640.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 648 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 350 gcctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtac 409 ||||||||||| || ||||||||||||||||||||||| |||| |||||||| |||| Sbjct: 503 gcctgctggagcacggcgccggtcttgtccttgccggcgatcgcggtctccttggcgtac 444 Query: 410 tgcgcggcg 418 ||||||||| Sbjct: 443 tgcgcggcg 435
>dbj|AK073837.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070H10, full insert sequence Length = 996 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 350 gcctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtac 409 ||||||||||| || ||||||||||||||||||||||| |||| |||||||| |||| Sbjct: 630 gcctgctggagcacggcgccggtcttgtccttgccggcgatcgcggtctccttggcgtac 571 Query: 410 tgcgcggcg 418 ||||||||| Sbjct: 570 tgcgcggcg 562
>dbj|AK064074.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-H02, full insert sequence Length = 1006 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 350 gcctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtac 409 ||||||||||| || ||||||||||||||||||||||| |||| |||||||| |||| Sbjct: 632 gcctgctggagcacggcgccggtcttgtccttgccggcgatcgcggtctccttggcgtac 573 Query: 410 tgcgcggcg 418 ||||||||| Sbjct: 572 tgcgcggcg 564
>dbj|D26536.1|RICWSI18 Oryza sativa (japonica cultivar-group) mRNA for WSI18 protein induced by water stress, complete cds Length = 978 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Minus Query: 350 gcctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgtac 409 ||||||||||| || ||||||||||||||||||||||| |||| |||||||| |||| Sbjct: 612 gcctgctggagcacggcgccggtcttgtccttgccggcgatcgcggtctccttggcgtac 553 Query: 410 tgcgcggcg 418 ||||||||| Sbjct: 552 tgcgcggcg 544
>dbj|AP003381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0692C11 Length = 169562 Score = 71.9 bits (36), Expect = 3e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 367 gccggtcttgtccttgccggcgacggcggactccttggtgtactgcgcggcg 418 ||||||||||||||||||||||| |||| |||||||| ||||||||||||| Sbjct: 5649 gccggtcttgtccttgccggcgatcgcggtctccttggcgtactgcgcggcg 5700
>dbj|AP003023.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684B02 Length = 132470 Score = 71.9 bits (36), Expect = 3e-09 Identities = 48/52 (92%) Strand = Plus / Plus Query: 367 gccggtcttgtccttgccggcgacggcggactccttggtgtactgcgcggcg 418 ||||||||||||||||||||||| |||| |||||||| ||||||||||||| Sbjct: 72573 gccggtcttgtccttgccggcgatcgcggtctccttggcgtactgcgcggcg 72624
>dbj|AB001682.1| Oryza sativa DNA, cis-acting regulator of water stress specific gene Length = 2828 Score = 71.9 bits (36), Expect = 3e-09 Identities = 48/52 (92%) Strand = Plus / Minus Query: 367 gccggtcttgtccttgccggcgacggcggactccttggtgtactgcgcggcg 418 ||||||||||||||||||||||| |||| |||||||| ||||||||||||| Sbjct: 2385 gccggtcttgtccttgccggcgatcgcggtctccttggcgtactgcgcggcg 2334
>emb|Z29512.1|ZMLEAMGL3 Z.mays mRNA for group 3 Lea protein MGL3 Length = 1094 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 349 ggcctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgta 408 ||||||||||| | ||| ||||| |||||||||||||| |||||||| ||||||| ||| Sbjct: 671 ggcctgctggatgacgccgccggacttgtccttgccggagacggcggtgtccttggcgta 612 Query: 409 ctgcgcggcgtcgg 422 |||| |||| |||| Sbjct: 611 ctgcccggcctcgg 598 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 458 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 517 |||||||||||||| ||||| || | |||| ||||||| |||||||| ||||||||| || Sbjct: 496 gccttctgcttggcggcctccgtcgtctcgccggccttctgcttggcggcctccgtcgtc 437 Query: 518 tcgccg 523 |||||| Sbjct: 436 tcgccg 431 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 458 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 517 |||||||||||||| ||||| || | |||| ||||||||||||||| ||||||||| || Sbjct: 463 gccttctgcttggcggcctccgtcgtctcgccggccttgtgcttggtggcctccgtcgtc 404 Query: 518 tcgccg 523 |||||| Sbjct: 403 tcgccg 398 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 458 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 517 ||||||||||||| || ||| || | |||| ||||||| |||||||| ||||||||| || Sbjct: 529 gccttctgcttggtcgtctccgtcgtctcgccggccttctgcttggcggcctccgtcgtc 470 Query: 518 tcgccg 523 |||||| Sbjct: 469 tcgccg 464 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 458 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 517 |||||||||||||| ||||| | || ||||| ||||| ||| |||| ||||||||| || Sbjct: 595 gccttctgcttggcggcctccatggcgtcggctgccttctgcctggcggcctccgtcgtc 536 Query: 518 tcgccg 523 |||||| Sbjct: 535 tcgccg 530 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Minus Query: 482 gcctcggcggccttgtgcttggccgcctcc 511 |||||||||||||| |||||||| |||||| Sbjct: 604 gcctcggcggccttctgcttggcggcctcc 575 Score = 44.1 bits (22), Expect = 0.57 Identities = 61/74 (82%) Strand = Plus / Minus Query: 458 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 517 ||||| ||||||| ||||| || | |||| ||||||||||||||||| | || |||||| Sbjct: 430 gccttgtgcttggtggcctccgtcgtctcgccggccttgtgcttggcctcgtcggtcttc 371 Query: 518 tcgccgaggaagct 531 | ||| ||| |||| Sbjct: 370 ttgcccaggtagct 357 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 604 ctcgccggccttctgcttggt 624 ||||||||||||||||||||| Sbjct: 536 ctcgccggccttctgcttggt 516 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 604 ctcgccggccttctgcttggtggcc 628 |||||||||||||||||||| |||| Sbjct: 503 ctcgccggccttctgcttggcggcc 479 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 604 ctcgccggccttctgcttggtggcc 628 |||||||||||||||||||| |||| Sbjct: 470 ctcgccggccttctgcttggcggcc 446 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 604 ctcgccggccttctgcttggtggcc 628 |||||||||||| |||||||||||| Sbjct: 437 ctcgccggccttgtgcttggtggcc 413 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 601 ggcctcgccggccttctgcttggtggcc 628 ||||||| ||||||||||||||| |||| Sbjct: 605 ggcctcggcggccttctgcttggcggcc 578
>dbj|D26552.1|MZEG3LP Zea mays mRNA for group 3 Lea protein MGL3, complete cds Length = 1094 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 349 ggcctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgta 408 ||||||||||| | ||| ||||| |||||||||||||| |||||||| ||||||| ||| Sbjct: 671 ggcctgctggatgacgccgccggacttgtccttgccggagacggcggtgtccttggcgta 612 Query: 409 ctgcgcggcgtcgg 422 |||| |||| |||| Sbjct: 611 ctgcccggcctcgg 598 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 458 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 517 |||||||||||||| ||||| || | |||| ||||||| |||||||| ||||||||| || Sbjct: 496 gccttctgcttggcggcctccgtcgtctcgccggccttctgcttggcggcctccgtcgtc 437 Query: 518 tcgccg 523 |||||| Sbjct: 436 tcgccg 431 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 458 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 517 |||||||||||||| ||||| || | |||| ||||||||||||||| ||||||||| || Sbjct: 463 gccttctgcttggcggcctccgtcgtctcgccggccttgtgcttggtggcctccgtcgtc 404 Query: 518 tcgccg 523 |||||| Sbjct: 403 tcgccg 398 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 458 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 517 ||||||||||||| || ||| || | |||| ||||||| |||||||| ||||||||| || Sbjct: 529 gccttctgcttggtcgtctccgtcgtctcgccggccttctgcttggcggcctccgtcgtc 470 Query: 518 tcgccg 523 |||||| Sbjct: 469 tcgccg 464 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 458 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 517 |||||||||||||| ||||| | || ||||| ||||| ||| |||| ||||||||| || Sbjct: 595 gccttctgcttggcggcctccatggcgtcggctgccttctgcctggcggcctccgtcgtc 536 Query: 518 tcgccg 523 |||||| Sbjct: 535 tcgccg 530 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Minus Query: 482 gcctcggcggccttgtgcttggccgcctcc 511 |||||||||||||| |||||||| |||||| Sbjct: 604 gcctcggcggccttctgcttggcggcctcc 575 Score = 44.1 bits (22), Expect = 0.57 Identities = 61/74 (82%) Strand = Plus / Minus Query: 458 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 517 ||||| ||||||| ||||| || | |||| ||||||||||||||||| | || |||||| Sbjct: 430 gccttgtgcttggtggcctccgtcgtctcgccggccttgtgcttggcctcgtcggtcttc 371 Query: 518 tcgccgaggaagct 531 | ||| ||| |||| Sbjct: 370 ttgcccaggtagct 357 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 604 ctcgccggccttctgcttggt 624 ||||||||||||||||||||| Sbjct: 536 ctcgccggccttctgcttggt 516 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 604 ctcgccggccttctgcttggtggcc 628 |||||||||||||||||||| |||| Sbjct: 503 ctcgccggccttctgcttggcggcc 479 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 604 ctcgccggccttctgcttggtggcc 628 |||||||||||||||||||| |||| Sbjct: 470 ctcgccggccttctgcttggcggcc 446 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 604 ctcgccggccttctgcttggtggcc 628 |||||||||||| |||||||||||| Sbjct: 437 ctcgccggccttgtgcttggtggcc 413 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 601 ggcctcgccggccttctgcttggtggcc 628 ||||||| ||||||||||||||| |||| Sbjct: 605 ggcctcggcggccttctgcttggcggcc 578
>gb|U05226.1|ZMU05226 Zea mays group 3 Lea protein MGL3 mRNA, complete cds Length = 1094 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 349 ggcctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgta 408 ||||||||||| | ||| ||||| |||||||||||||| |||||||| ||||||| ||| Sbjct: 671 ggcctgctggatgacgccgccggacttgtccttgccggagacggcggtgtccttggcgta 612 Query: 409 ctgcgcggcgtcgg 422 |||| |||| |||| Sbjct: 611 ctgcccggcctcgg 598 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 458 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 517 |||||||||||||| ||||| || | |||| ||||||| |||||||| ||||||||| || Sbjct: 496 gccttctgcttggcggcctccgtcgtctcgccggccttctgcttggcggcctccgtcgtc 437 Query: 518 tcgccg 523 |||||| Sbjct: 436 tcgccg 431 Score = 67.9 bits (34), Expect = 4e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 458 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 517 |||||||||||||| ||||| || | |||| ||||||||||||||| ||||||||| || Sbjct: 463 gccttctgcttggcggcctccgtcgtctcgccggccttgtgcttggtggcctccgtcgtc 404 Query: 518 tcgccg 523 |||||| Sbjct: 403 tcgccg 398 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 458 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 517 ||||||||||||| || ||| || | |||| ||||||| |||||||| ||||||||| || Sbjct: 529 gccttctgcttggtcgtctccgtcgtctcgccggccttctgcttggcggcctccgtcgtc 470 Query: 518 tcgccg 523 |||||| Sbjct: 469 tcgccg 464 Score = 52.0 bits (26), Expect = 0.002 Identities = 56/66 (84%) Strand = Plus / Minus Query: 458 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 517 |||||||||||||| ||||| | || ||||| ||||| ||| |||| ||||||||| || Sbjct: 595 gccttctgcttggcggcctccatggcgtcggctgccttctgcctggcggcctccgtcgtc 536 Query: 518 tcgccg 523 |||||| Sbjct: 535 tcgccg 530 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Minus Query: 482 gcctcggcggccttgtgcttggccgcctcc 511 |||||||||||||| |||||||| |||||| Sbjct: 604 gcctcggcggccttctgcttggcggcctcc 575 Score = 44.1 bits (22), Expect = 0.57 Identities = 61/74 (82%) Strand = Plus / Minus Query: 458 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 517 ||||| ||||||| ||||| || | |||| ||||||||||||||||| | || |||||| Sbjct: 430 gccttgtgcttggtggcctccgtcgtctcgccggccttgtgcttggcctcgtcggtcttc 371 Query: 518 tcgccgaggaagct 531 | ||| ||| |||| Sbjct: 370 ttgcccaggtagct 357 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 604 ctcgccggccttctgcttggt 624 ||||||||||||||||||||| Sbjct: 536 ctcgccggccttctgcttggt 516 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 604 ctcgccggccttctgcttggtggcc 628 |||||||||||||||||||| |||| Sbjct: 503 ctcgccggccttctgcttggcggcc 479 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 604 ctcgccggccttctgcttggtggcc 628 |||||||||||||||||||| |||| Sbjct: 470 ctcgccggccttctgcttggcggcc 446 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 604 ctcgccggccttctgcttggtggcc 628 |||||||||||| |||||||||||| Sbjct: 437 ctcgccggccttgtgcttggtggcc 413 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 601 ggcctcgccggccttctgcttggtggcc 628 ||||||| ||||||||||||||| |||| Sbjct: 605 ggcctcggcggccttctgcttggcggcc 578
>emb|AJ000100.1|HVAJ100 Hordeum vulgare mRNA for cold-regulated protein, partial Length = 594 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 506 gcctccgtcttctcgccgaggaagctccccgtctggtccttgctctcggcggcgcggtcc 565 |||||||||||||||||||| ||||| |||||||||| |||| |||| ||||||| ||| Sbjct: 151 gcctccgtcttctcgccgagaaagctggccgtctggtctttgccctcgacggcgcgatcc 92 Query: 566 t 566 | Sbjct: 91 t 91
>emb|X79466.1|HVES2A H.vulgare (Dbg 567) ES2A mRNA Length = 793 Score = 65.9 bits (33), Expect = 2e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 506 gcctccgtcttctcgccgaggaagctccccgtctggtccttgctctcggcggcgcggtcc 565 |||||||||||||||||||| ||||| |||||||||| |||| |||| ||||||| ||| Sbjct: 367 gcctccgtcttctcgccgagaaagctggccgtctggtctttgccctcgacggcgcgatcc 308 Query: 566 t 566 | Sbjct: 307 t 307
>emb|Y10779.1|SSY10779 S.stapfianus pSD.42 mRNA Length = 392 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 460 cttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctc 510 ||||||||||||| ||||||| | |||||||| ||| |||||||||||||| Sbjct: 215 cttctgcttggccacctcggtggtctcggcggtcttctgcttggccgcctc 165 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 460 cttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctc 510 ||||||||||||||||||||| | |||||||| ||| |||||||| ||||| Sbjct: 182 cttctgcttggccgcctcggtggtctcggcggtcttctgcttggcggcctc 132 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Minus Query: 458 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 517 ||||||||||||| | |||||| | ||| ||||||||||||||||| || |||||| Sbjct: 118 gccttctgcttggttgactcggtggtctcaccggccttgtgcttggcctggtcggtcttc 59 Query: 518 tcgccgaggaagctccccgtct 539 | ||||||||||| ||||||| Sbjct: 58 tgaccgaggaagcttcccgtct 37 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 447 ccgtctccgacgccttctgcttgg 470 |||||||||| ||||||||||||| Sbjct: 42 ccgtctccgaggccttctgcttgg 19
>gb|AY104227.1| Zea mays PCO084365 mRNA sequence Length = 1024 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 349 ggcctgctggagggcgctgccggtcttgtccttgccggcgacggcggactccttggtgta 408 ||||||||||| | ||| ||||| |||||||||||||| ||| |||| ||||||| ||| Sbjct: 583 ggcctgctggatgacgccgccggacttgtccttgccggagacagcggtgtccttggcgta 524 Query: 409 ctgcgcggcgtcgg 422 |||| | ||||||| Sbjct: 523 ctgcccagcgtcgg 510 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 458 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 517 |||||||||||||| ||||| | || ||||| ||||| |||||||| ||||||||| || Sbjct: 507 gccttctgcttggcggcctccatggcgtcggctgccttctgcttggcggcctccgtcgtc 448 Query: 518 tcgccg 523 |||||| Sbjct: 447 tcgccg 442 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Minus Query: 458 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 517 |||||||||||||| ||||| || | |||| ||||||| ||||||| ||||||||| || Sbjct: 474 gccttctgcttggcggcctccgtcgtctcgccggccttctgcttggtggcctccgtcgtc 415 Query: 518 tcgccg 523 |||||| Sbjct: 414 tcgccg 409 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 458 gccttctgcttggccgcctcggttgcctcggcggccttgtgcttggccgcctccgtcttc 517 ||||||||||||| ||||| || | |||| ||||||||||||||||| | || |||||| Sbjct: 441 gccttctgcttggtggcctccgtcgtctcgccggccttgtgcttggcctcgtcggtcttc 382 Query: 518 tcgccgaggaagct 531 | ||| ||| |||| Sbjct: 381 ttgcccaggtagct 368 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 604 ctcgccggccttctgcttggtggcc 628 ||||||||||||||||||||||||| Sbjct: 448 ctcgccggccttctgcttggtggcc 424
>gb|U73217.1|TAU73217 Triticum aestivum cold acclimation protein WCOR615 (Wcor615) mRNA, complete cds Length = 776 Score = 58.0 bits (29), Expect = 4e-05 Identities = 68/81 (83%) Strand = Plus / Minus Query: 485 tcggcggccttgtgcttggccgcctccgtcttctcgccgaggaagctccccgtctggtcc 544 ||||||||| | | |||||| ||||| |||||||| |||| ||||| |||||||||| Sbjct: 345 tcggcggccatcttcttggcggcctcggtcttctcaccgaagaagccgaacgtctggtcc 286 Query: 545 ttgctctcggcggcgcggtcc 565 ||||||||| |||||||||| Sbjct: 285 ttgctctcgatggcgcggtcc 265
>gb|BT023964.1| Zea mays clone EL01N0409B10 mRNA sequence Length = 1065 Score = 48.1 bits (24), Expect = 0.037 Identities = 45/52 (86%) Strand = Plus / Minus Query: 367 gccggtcttgtccttgccggcgacggcggactccttggtgtactgcgcggcg 418 ||||||||||||||||||||| || ||| ||||||| |||| |||||||| Sbjct: 525 gccggtcttgtccttgccggccaccacggtgtccttggcgtacagcgcggcg 474
>gb|AY106518.1| Zea mays PCO092427 mRNA sequence Length = 583 Score = 48.1 bits (24), Expect = 0.037 Identities = 45/52 (86%) Strand = Plus / Minus Query: 367 gccggtcttgtccttgccggcgacggcggactccttggtgtactgcgcggcg 418 ||||||||||||||||||||| || ||| ||||||| |||| |||||||| Sbjct: 121 gccggtcttgtccttgccggccaccacggtgtccttggcgtacagcgcggcg 70
>gb|AF527809.1| Sorghum bicolor clone BAC SB_BBc0234M12 php200725 orthologous region Length = 108553 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 597 ccttggcctcgccggccttctgc 619 ||||||||||||||||||||||| Sbjct: 1289 ccttggcctcgccggccttctgc 1267
>gb|AF527807.1| Sorghum bicolor clone BAC SB_BBc0126P21 php200725 orthologous region Length = 75840 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 597 ccttggcctcgccggccttctgc 619 ||||||||||||||||||||||| Sbjct: 69462 ccttggcctcgccggccttctgc 69440
>gb|AC161812.3| Mus musculus chromosome 15, clone RP23-195I24, complete sequence Length = 204464 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 315 tggcgcccaccacggcgttcaccacc 340 |||||||||||| ||||||||||||| Sbjct: 194133 tggcgcccaccaaggcgttcaccacc 194158
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 334 caccaccgtctcgccggcctgc 355 |||||||||||||||||||||| Sbjct: 2966580 caccaccgtctcgccggcctgc 2966601 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 484 ctcggcggccttgtgcttggccgc 507 ||||||||||||||||| |||||| Sbjct: 1276844 ctcggcggccttgtgctcggccgc 1276821
>gb|AC104834.4| Mus Musculus Strain C57BL6/J Chromosome 15 RP23-274F23, complete sequence Length = 215113 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 315 tggcgcccaccacggcgttcaccacc 340 |||||||||||| ||||||||||||| Sbjct: 85904 tggcgcccaccaaggcgttcaccacc 85879
>ref|NM_011323.1| Mus musculus sodium channel, voltage-gated, type VIII, alpha (Scn8a), mRNA Length = 5937 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 315 tggcgcccaccacggcgttcaccacc 340 |||||||||||| ||||||||||||| Sbjct: 3964 tggcgcccaccaaggcgttcaccacc 3939
>dbj|AK083220.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630029C19 product:sodium channel, voltage-gated, type VIII, alpha polypeptide, full insert sequence Length = 4675 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 315 tggcgcccaccacggcgttcaccacc 340 |||||||||||| ||||||||||||| Sbjct: 1615 tggcgcccaccaaggcgttcaccacc 1590
>gb|AF049617.1|AF049617 Mus musculus neuronal voltage-gated sodium channel alpha subunit (Scn8a) mRNA, complete cds Length = 5937 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 315 tggcgcccaccacggcgttcaccacc 340 |||||||||||| ||||||||||||| Sbjct: 3964 tggcgcccaccaaggcgttcaccacc 3939
>gb|U26707.1|MMU26707 Mus musculus voltage-gated sodium channel alpha subunit SCN8A (Scn8a) mRNA, complete cds Length = 5352 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 315 tggcgcccaccacggcgttcaccacc 340 |||||||||||| ||||||||||||| Sbjct: 3238 tggcgcccaccaaggcgttcaccacc 3213
>ref|XM_464440.1| Oryza sativa (japonica cultivar-group), mRNA Length = 180 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 380 ttgccggcgacggcggactcc 400 ||||||||||||||||||||| Sbjct: 133 ttgccggcgacggcggactcc 153
>ref|XM_455818.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F16423g predicted mRNA Length = 1380 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 129 aaaagagtggaaacatacaaa 149 ||||||||||||||||||||| Sbjct: 1155 aaaagagtggaaacatacaaa 1175
>gb|AC146389.3| Pan troglodytes BAC clone RP43-143J12 from 7, complete sequence Length = 141930 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 137 ggaaacatacaaatatatgtg 157 ||||||||||||||||||||| Sbjct: 7979 ggaaacatacaaatatatgtg 7999
>gb|AF031590.1| Streptomyces coelicolor thioredoxin (trxA) gene, partial cds; SpoOJ-like, Soj-like, GidB-like, Jag-like, inner membrane protein, and 9-10kDa protein-like genes, complete cds; RNase P protein (rnpA) gene, partial cds; and unknown gene Length = 6676 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 476 tcggttgcctcggcggccttg 496 ||||||||||||||||||||| Sbjct: 2093 tcggttgcctcggcggccttg 2073
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 129 aaaagagtggaaacatacaaa 149 ||||||||||||||||||||| Sbjct: 1516942 aaaagagtggaaacatacaaa 1516922
>emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genome; segment 8/16 Length = 349640 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 462 tctgcttggccgcctcggttg 482 ||||||||||||||||||||| Sbjct: 204707 tctgcttggccgcctcggttg 204687
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 476 tcggttgcctcggcggccttg 496 ||||||||||||||||||||| Sbjct: 51194 tcggttgcctcggcggccttg 51214
>ref|NM_001028871.2| Caenorhabditis elegans plant Late Embryo Abundant (LEA) related family member (lea-1) (lea-1) mRNA, complete cds Length = 2363 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 592 cttgtccttggcctcgccggccttctgcttggt 624 |||||||||||||||||| ||||| | |||||| Sbjct: 1898 cttgtccttggcctcgccagccttgtccttggt 1866
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 380 ttgccggcgacggcggactcc 400 ||||||||||||||||||||| Sbjct: 5232603 ttgccggcgacggcggactcc 5232623
>gb|AC090497.2|AC090497 Homo sapiens chromosome 7 clone RP11-643E1, complete sequence Length = 169199 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 137 ggaaacatacaaatatatgtg 157 ||||||||||||||||||||| Sbjct: 91501 ggaaacatacaaatatatgtg 91481
>gb|AC083862.2|AC083862 Homo sapiens chromosome 7 clone RP11-134L10, complete sequence Length = 162931 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 137 ggaaacatacaaatatatgtg 157 ||||||||||||||||||||| Sbjct: 29435 ggaaacatacaaatatatgtg 29415
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 327 cggcgttcaccaccgtctcgccggc 351 |||||| |||||||||||||||||| Sbjct: 3408378 cggcgtccaccaccgtctcgccggc 3408354
>dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0437H03 Length = 170173 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 380 ttgccggcgacggcggactcc 400 ||||||||||||||||||||| Sbjct: 126056 ttgccggcgacggcggactcc 126076
>dbj|AB104882.1| Serratia marcescens sdeX, sdeY genes for multidrug efflux pump SdeX, multidrug efflux pump SdeY, complete cds Length = 4503 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 303 ccacggcgtccttggcgcccaccacggcg 331 |||||||| |||||||| ||||||||||| Sbjct: 541 ccacggcggccttggcggccaccacggcg 513
>gb|AF187159.1|AF187159 Streptomyces coelicolor TrxB (trxB) gene, partial cds; and TrxA (trxA), Orf205, ParB (parB), ParA (parA), GidB (gidB), Jag (jag), Orf431, Orf124, RNase P protein (rnpB), ribosomal protein rpmH (rpmH), DnaA (dnaA), and DnaN (dnaN) genes, complete cds Length = 12198 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 476 tcggttgcctcggcggccttg 496 ||||||||||||||||||||| Sbjct: 2767 tcggttgcctcggcggccttg 2747
>emb|Z83113.1|CEK08H10 Caenorhabditis elegans Cosmid K08H10, complete sequence Length = 39339 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 592 cttgtccttggcctcgccggccttctgcttggt 624 |||||||||||||||||| ||||| | |||||| Sbjct: 35761 cttgtccttggcctcgccagccttgtccttggt 35729
>gb|DQ124698.1| Aeromonas hydrophila strain AH-3 FliE (fliE), FliF (fliF), FliG (fliG), FliH (fliH), FliI (fliI), FliJ (fliJ), FliK (fliK), FliL (fliL), FliM (fliM), FliN (fliN), FliO (fliO), FliP (fliP), FliQ (fliQ), FliR (fliR), FlhB (flhB), FlhA (flhA), FlhF (flhF), FlhG (flhG), FliA (fliA), CheY (cheY), CheZ (cheZ), CheA (cheA), CheB (cheB), PomA (pomA), PomB (pomB), and CheW (cheW) genes, complete cds; and unknown genes Length = 29850 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 253 ggtgtccttgctggtgttggtgttg 277 |||||||||||||| |||||||||| Sbjct: 28815 ggtgtccttgctggcgttggtgttg 28839
>gb|AF016513.1|AF016513 Caenorhabditis elegans Ce-LEA (lea) mRNA, complete cds Length = 2286 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 592 cttgtccttggcctcgccggccttctgcttggt 624 |||||||||||||||||| ||||| | |||||| Sbjct: 1910 cttgtccttggcctcgccagccttgtccttggt 1878
>gb|BC086558.1| Rattus norvegicus ectonucleoside triphosphate diphosphohydrolase 2, mRNA (cDNA clone MGC:105301 IMAGE:7302083), complete cds Length = 1865 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 ggcctcgccggccttctgct 620 |||||||||||||||||||| Sbjct: 63 ggcctcgccggccttctgct 82
>ref|NM_185435.2| Oryza sativa (japonica cultivar-group), mRNA Length = 957 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 552 cggcggcgcggtccttggccgcct 575 ||||||||||| |||||||||||| Sbjct: 332 cggcggcgcgggccttggccgcct 309
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 343 ctcgccggcctgctggagggcgctgccg 370 ||||||||||||||||| ||||| |||| Sbjct: 222207 ctcgccggcctgctggatggcgccgccg 222180
>ref|XM_514687.1| PREDICTED: Pan troglodytes LOC458292 (LOC458292), mRNA Length = 2786 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 caccgcccatgcccagcgtg 298 |||||||||||||||||||| Sbjct: 1825 caccgcccatgcccagcgtg 1844
>ref|XM_469886.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1350 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 571 cgcctgcgccgtctgtgccg 590 |||||||||||||||||||| Sbjct: 1012 cgcctgcgccgtctgtgccg 993
>ref|NM_172030.1| Rattus norvegicus ectonucleoside triphosphate diphosphohydrolase 2 (Entpd2), mRNA Length = 1900 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 ggcctcgccggccttctgct 620 |||||||||||||||||||| Sbjct: 53 ggcctcgccggccttctgct 72
>ref|XM_473850.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 825 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 594 tgtccttggcctcgccggcc 613 |||||||||||||||||||| Sbjct: 550 tgtccttggcctcgccggcc 531
>gb|AC136522.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H03, complete sequence Length = 185881 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 571 cgcctgcgccgtctgtgccg 590 |||||||||||||||||||| Sbjct: 92532 cgcctgcgccgtctgtgccg 92551
>gb|AC136150.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0023F12, complete sequence Length = 147801 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 571 cgcctgcgccgtctgtgccg 590 |||||||||||||||||||| Sbjct: 17033 cgcctgcgccgtctgtgccg 17014
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 373 cttgtccttgccggcgacggcgga 396 |||||||||||||| ||||||||| Sbjct: 1787593 cttgtccttgccggtgacggcgga 1787616
>gb|AC159451.1| Trypanosoma brucei chromosome 8 clone RPCI93-5H5, complete sequence Length = 159463 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 cacggcgtccttggcgccca 323 |||||||||||||||||||| Sbjct: 117770 cacggcgtccttggcgccca 117789
>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence Length = 2481190 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 cacggcgtccttggcgccca 323 |||||||||||||||||||| Sbjct: 1502816 cacggcgtccttggcgccca 1502797
>gb|AC147460.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAb0050G15, complete sequence Length = 126156 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 571 cgcctgcgccgtctgtgccg 590 |||||||||||||||||||| Sbjct: 77764 cgcctgcgccgtctgtgccg 77745
>gb|AC137759.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0008H02, complete sequence Length = 143438 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 571 cgcctgcgccgtctgtgccg 590 |||||||||||||||||||| Sbjct: 117567 cgcctgcgccgtctgtgccg 117548
>gb|AC134922.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0004D06, complete sequence Length = 157547 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 571 cgcctgcgccgtctgtgccg 590 |||||||||||||||||||| Sbjct: 92530 cgcctgcgccgtctgtgccg 92549
>gb|BC013365.2| Homo sapiens chromosome 20 open reading frame 67, mRNA (cDNA clone MGC:16205 IMAGE:3640928), complete cds Length = 2691 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 caccgcccatgcccagcgtg 298 |||||||||||||||||||| Sbjct: 1523 caccgcccatgcccagcgtg 1542
>gb|BC010005.2| Homo sapiens chromosome 20 open reading frame 67, mRNA (cDNA clone MGC:15106 IMAGE:4131938), complete cds Length = 2691 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 caccgcccatgcccagcgtg 298 |||||||||||||||||||| Sbjct: 1524 caccgcccatgcccagcgtg 1543
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 cgccgtctccgacgccttct 464 |||||||||||||||||||| Sbjct: 4858505 cgccgtctccgacgccttct 4858524
>ref|NM_022104.3| Homo sapiens chromosome 20 open reading frame 67 (C20orf67), mRNA Length = 2703 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 caccgcccatgcccagcgtg 298 |||||||||||||||||||| Sbjct: 1552 caccgcccatgcccagcgtg 1571
>gb|AC164954.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940128D9, complete sequence Length = 128585 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 486 cggcggccttgtgcttggccgcct 509 ||||||||||| |||||||||||| Sbjct: 109460 cggcggccttgggcttggccgcct 109483
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 571 cgcctgcgccgtctgtgccg 590 |||||||||||||||||||| Sbjct: 31334156 cgcctgcgccgtctgtgccg 31334175
>ref|XM_756111.1| Ustilago maydis 521 hypothetical protein (UM05057.1) partial mRNA Length = 4410 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 gccgcctccgtcttctcgcc 522 |||||||||||||||||||| Sbjct: 3618 gccgcctccgtcttctcgcc 3599
>ref|XM_756804.1| Ustilago maydis 521 hypothetical protein (UM05750.1) partial mRNA Length = 1608 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 ccttgctggtgttggtgttg 277 |||||||||||||||||||| Sbjct: 1149 ccttgctggtgttggtgttg 1168
>emb|AM085146.1| Magnetospirillum gryphiswaldense magnetosome island Length = 130000 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 tgtccttgccggcgacggcg 394 |||||||||||||||||||| Sbjct: 25909 tgtccttgccggcgacggcg 25928
>ref|XM_819862.1| Trypanosoma brucei TREU927 clone RPCI93-5H5 DNA-directed RNA polymerase I largest subunit (Tb927.8.5090) partial mRNA Length = 5346 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 cacggcgtccttggcgccca 323 |||||||||||||||||||| Sbjct: 84 cacggcgtccttggcgccca 65
>ref|XM_750611.1| Aspergillus fumigatus Af293 NADH-ubiquinone oxidoreductase 49 kDa subunit (Afu2g13710) partial mRNA Length = 1560 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 ggtgttggtgttgtcaccgc 284 |||||||||||||||||||| Sbjct: 997 ggtgttggtgttgtcaccgc 1016
>ref|XM_816345.1| Trypanosoma cruzi strain CL Brener trans-sialidase (Tc00.1047053508163.250) partial mRNA Length = 2874 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 565 cttggccgcctgcgccgtctgtgc 588 ||||||| |||||||||||||||| Sbjct: 2110 cttggcctcctgcgccgtctgtgc 2087
>gb|AC122866.4| Mus musculus BAC clone RP23-145J18 from 8, complete sequence Length = 200136 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 gaaacatacaaatatatgtg 157 |||||||||||||||||||| Sbjct: 72776 gaaacatacaaatatatgtg 72795
>ref|XM_674992.1| Plasmodium berghei strain ANKA hypothetical protein (PB105992.00.0) partial mRNA Length = 504 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 250 ggtggtgtccttgctggtgttggtgttg 277 |||||||||| || |||||||||||||| Sbjct: 229 ggtggtgtccctggtggtgttggtgttg 256
>gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1356F10, complete sequence Length = 170681 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 571 cgcctgcgccgtctgtgccg 590 |||||||||||||||||||| Sbjct: 32190 cgcctgcgccgtctgtgccg 32171
>emb|AL929500.4| Human DNA sequence from clone CITF22-57B10 on chromosome 22, complete sequence Length = 8930 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 254 gtgtccttgctggtgttggt 273 |||||||||||||||||||| Sbjct: 1511 gtgtccttgctggtgttggt 1492
>gb|AC123524.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0052C03, complete sequence Length = 157178 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 571 cgcctgcgccgtctgtgccg 590 |||||||||||||||||||| Sbjct: 11608 cgcctgcgccgtctgtgccg 11589
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 547 gctctcggcggcgcggtccttggc 570 ||||||||||||| |||||||||| Sbjct: 2436168 gctctcggcggcgtggtccttggc 2436145
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 291 ccagcgtgttggccacggcg 310 |||||||||||||||||||| Sbjct: 716948 ccagcgtgttggccacggcg 716929
>emb|X14399.1|TBRNPOL1 Trypanosoma brucei Trp11 gene for largest subunit of RNA polymerase I Length = 5780 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 cacggcgtccttggcgccca 323 |||||||||||||||||||| Sbjct: 414 cacggcgtccttggcgccca 395
>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12 Length = 347071 Score = 40.1 bits (20), Expect = 8.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 550 ctcggcggcgcggtccttggccgcctgcgccg 581 ||||||||||||| ||| ||||||| |||||| Sbjct: 242221 ctcggcggcgcgggcctgggccgccggcgccg 242190
>emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085I10, complete sequence Length = 150551 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 594 tgtccttggcctcgccggcc 613 |||||||||||||||||||| Sbjct: 82949 tgtccttggcctcgccggcc 82930
>emb|AL137473.1|HSM802193 Homo sapiens mRNA; cDNA DKFZp434E1723 (from clone DKFZp434E1723) Length = 1363 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 caccgcccatgcccagcgtg 298 |||||||||||||||||||| Sbjct: 92 caccgcccatgcccagcgtg 111
>dbj|AK056553.1| Homo sapiens cDNA FLJ31991 fis, clone NT2RP7009097 Length = 2795 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 caccgcccatgcccagcgtg 298 |||||||||||||||||||| Sbjct: 1530 caccgcccatgcccagcgtg 1549
>gb|AC090713.6| Oryza sativa chromosome 3 BAC OSJNBa0002J24 genomic sequence, complete sequence Length = 146022 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 571 cgcctgcgccgtctgtgccg 590 |||||||||||||||||||| Sbjct: 141397 cgcctgcgccgtctgtgccg 141416
>gb|AC174233.4| Pan troglodytes BAC clone CH251-560K10 from chromosome unknown, complete sequence Length = 179813 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 aaggaaagcaaatttaaactgagc 208 |||||| ||||||||||||||||| Sbjct: 15469 aaggaaggcaaatttaaactgagc 15446
>gb|AC026696.5| Homo sapiens chromosome 5 clone CTC-348L14, complete sequence Length = 125862 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 cgactaaaggaaagcaaatt 198 |||||||||||||||||||| Sbjct: 123240 cgactaaaggaaagcaaatt 123221
>gb|AC022849.5| Homo sapiens, clone RP11-274M4, complete sequence Length = 154511 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 caacactgaaattcgggaaa 131 |||||||||||||||||||| Sbjct: 70108 caacactgaaattcgggaaa 70127
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 370 ggtcttgtccttgccggcgacggcggac 397 ||||||| |||| ||||||||||||||| Sbjct: 1361353 ggtcttggcctttccggcgacggcggac 1361326
>emb|AJ272265.1|HSA272265 Homo sapiens SPP2 gene for secreted phosphoprotein 24 precursor, exons 1-8 Length = 30000 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 aaggaaagcaaatttaaactgagc 208 |||||| ||||||||||||||||| Sbjct: 9066 aaggaaggcaaatttaaactgagc 9043
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 594 tgtccttggcctcgccggcc 613 |||||||||||||||||||| Sbjct: 30985576 tgtccttggcctcgccggcc 30985557
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 571 cgcctgcgccgtctgtgccg 590 |||||||||||||||||||| Sbjct: 26379402 cgcctgcgccgtctgtgccg 26379421 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 571 cgcctgcgccgtctgtgccg 590 |||||||||||||||||||| Sbjct: 21508671 cgcctgcgccgtctgtgccg 21508652 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 571 cgcctgcgccgtctgtgccg 590 |||||||||||||||||||| Sbjct: 6228330 cgcctgcgccgtctgtgccg 6228311
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 ctgcgcggcgtcggaggacc 428 |||||||||||||||||||| Sbjct: 17117329 ctgcgcggcgtcggaggacc 17117310 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 245 ccagtggtggtgtccttgctggtg 268 |||||||||||| ||||||||||| Sbjct: 15265829 ccagtggtggtgcccttgctggtg 15265806
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 571 cgcctgcgccgtctgtgccg 590 |||||||||||||||||||| Sbjct: 20965916 cgcctgcgccgtctgtgccg 20965897
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 552 cggcggcgcggtccttggccgcct 575 ||||||||||| |||||||||||| Sbjct: 875039 cggcggcgcgggccttggccgcct 875062
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 571 cgcctgcgccgtctgtgccg 590 |||||||||||||||||||| Sbjct: 31424672 cgcctgcgccgtctgtgccg 31424691
>gb|AY826881.1| Heterocapsa triquetra clone HTPETA1 chloroplast cytochrome f mRNA, partial cds; nuclear gene for chloroplast product Length = 1256 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 436 cgcgtactgcgccgtctccg 455 |||||||||||||||||||| Sbjct: 948 cgcgtactgcgccgtctccg 967
>gb|AC159031.1| Pan troglodytes BAC clone CH251-381B17 from chromosome unknown, complete sequence Length = 177940 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 aaggaaagcaaatttaaactgagc 208 |||||| ||||||||||||||||| Sbjct: 7616 aaggaaggcaaatttaaactgagc 7639
>gb|AC006037.2| Homo sapiens BAC clone RP11-263G22 from 2, complete sequence Length = 108711 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 aaggaaagcaaatttaaactgagc 208 |||||| ||||||||||||||||| Sbjct: 70935 aaggaaggcaaatttaaactgagc 70958
>gb|AF276940.1|AF276940 Rattus norvegicus testicular ecto-ATPase mRNA, complete cds Length = 1900 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 601 ggcctcgccggccttctgct 620 |||||||||||||||||||| Sbjct: 53 ggcctcgccggccttctgct 72
>dbj|AP003863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_A12 Length = 152269 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 571 cgcctgcgccgtctgtgccg 590 |||||||||||||||||||| Sbjct: 9215 cgcctgcgccgtctgtgccg 9196
>dbj|AP006753.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0039D04 Length = 184408 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 571 cgcctgcgccgtctgtgccg 590 |||||||||||||||||||| Sbjct: 176706 cgcctgcgccgtctgtgccg 176687
>emb|AJ315902.1|OSA315902 Oryza sativa DNA, clone F10 (C5) Length = 11618 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 552 cggcggcgcggtccttggccgcct 575 ||||||||||| |||||||||||| Sbjct: 7126 cggcggcgcgggccttggccgcct 7149
>dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0019F11 Length = 123673 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 552 cggcggcgcggtccttggccgcct 575 ||||||||||| |||||||||||| Sbjct: 55934 cggcggcgcgggccttggccgcct 55957
>dbj|AP006057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1342C04 Length = 172097 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 ctgcgcggcgtcggaggacc 428 |||||||||||||||||||| Sbjct: 58086 ctgcgcggcgtcggaggacc 58067
>dbj|AP005655.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0025H07 Length = 145605 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 ctgcgcggcgtcggaggacc 428 |||||||||||||||||||| Sbjct: 110988 ctgcgcggcgtcggaggacc 110969
>dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1740_D06 Length = 187410 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 245 ccagtggtggtgtccttgctggtg 268 |||||||||||| ||||||||||| Sbjct: 159805 ccagtggtggtgcccttgctggtg 159782
>dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0418B08 Length = 165909 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 245 ccagtggtggtgtccttgctggtg 268 |||||||||||| ||||||||||| Sbjct: 45018 ccagtggtggtgcccttgctggtg 44995
>dbj|AP003811.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1131_E05 Length = 122216 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 571 cgcctgcgccgtctgtgccg 590 |||||||||||||||||||| Sbjct: 93831 cgcctgcgccgtctgtgccg 93812
>dbj|AK073109.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022D23, full insert sequence Length = 1075 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 594 tgtccttggcctcgccggcc 613 |||||||||||||||||||| Sbjct: 628 tgtccttggcctcgccggcc 609
>dbj|AK073098.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033003O07, full insert sequence Length = 956 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 552 cggcggcgcggtccttggccgcct 575 ||||||||||| |||||||||||| Sbjct: 331 cggcggcgcgggccttggccgcct 308
>gb|AY552588.1| Trypanosoma cruzi clone C6:24B7 telomeric region Length = 34387 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 485 tcggcggccttgtgcttggc 504 |||||||||||||||||||| Sbjct: 23338 tcggcggccttgtgcttggc 23319
>dbj|AK061010.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-A12, full insert sequence Length = 1083 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 ctgcgcggcgtcggaggacc 428 |||||||||||||||||||| Sbjct: 836 ctgcgcggcgtcggaggacc 855
>gb|AY104425.1| Zea mays PCO148306 mRNA sequence Length = 1554 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 557 gcgcggtccttggccgcctgcgcc 580 |||||||||||| ||||||||||| Sbjct: 371 gcgcggtccttgtccgcctgcgcc 348
>dbj|AB050014.1| Homo sapiens mRNA for posphorylated CTD interacting factor PCIF1, complete cds Length = 2674 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 caccgcccatgcccagcgtg 298 |||||||||||||||||||| Sbjct: 1532 caccgcccatgcccagcgtg 1551
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 298 gttggccacggcgtccttggcgcc 321 ||||||||||||||| |||||||| Sbjct: 4734363 gttggccacggcgtctttggcgcc 4734340
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 571 cgcctgcgccgtctgtgccg 590 |||||||||||||||||||| Sbjct: 26704956 cgcctgcgccgtctgtgccg 26704975 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 571 cgcctgcgccgtctgtgccg 590 |||||||||||||||||||| Sbjct: 21818870 cgcctgcgccgtctgtgccg 21818851 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 571 cgcctgcgccgtctgtgccg 590 |||||||||||||||||||| Sbjct: 17703578 cgcctgcgccgtctgtgccg 17703559 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 571 cgcctgcgccgtctgtgccg 590 |||||||||||||||||||| Sbjct: 6294797 cgcctgcgccgtctgtgccg 6294778
>emb|AL162458.10| Human DNA sequence from clone RP11-465L10 on chromosome 20, complete sequence Length = 150791 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 caccgcccatgcccagcgtg 298 |||||||||||||||||||| Sbjct: 32196 caccgcccatgcccagcgtg 32215
>gb|AC160104.2| Mus musculus BAC clone RP24-330A11 from chromosome 9, complete sequence Length = 223326 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 aatcaaaggcaagctcaaca 116 |||||||||||||||||||| Sbjct: 153271 aatcaaaggcaagctcaaca 153290
>emb|AL732615.15| Mouse DNA sequence from clone RP23-190O8 on chromosome 4, complete sequence Length = 189819 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 taaaggaaagcaaatttaaa 202 |||||||||||||||||||| Sbjct: 155309 taaaggaaagcaaatttaaa 155290
>gb|M27164.1|TRBPOLI Trypanosoma brucei RNA polymerase I largest subunit (rpI196) gene, complete cds Length = 7077 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 cacggcgtccttggcgccca 323 |||||||||||||||||||| Sbjct: 419 cacggcgtccttggcgccca 400 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,914,630 Number of Sequences: 3902068 Number of extensions: 4914630 Number of successful extensions: 116457 Number of sequences better than 10.0: 143 Number of HSP's better than 10.0 without gapping: 150 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 113361 Number of HSP's gapped (non-prelim): 3050 length of query: 655 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 632 effective length of database: 17,143,297,704 effective search space: 10834564148928 effective search space used: 10834564148928 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
