ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags16d04 |
|---|---|
| Clone Library Name | barley_pub |
>RS27_HORVU (Q96564) 40S ribosomal protein S27 (Manganese efficiency-related| protein 1) Length = 86 Score = 159 bits (403), Expect = 2e-39 Identities = 77/86 (89%), Positives = 77/86 (89%) Frame = -1 Query: 429 MVLQNDIDLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPG 250 MVLQNDIDLLNPPA KRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPG Sbjct: 1 MVLQNDIDLLNPPAELEKLKHKKKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPG 60 Query: 249 CQTVLCQPTGGKARLTEGCSFRRKGD 172 CQTVLCQPTGGKARLTEGCSFRRKGD Sbjct: 61 CQTVLCQPTGGKARLTEGCSFRRKGD 86
>RS27B_ARATH (Q9M2F1) 40S ribosomal protein S27-2| Length = 86 Score = 152 bits (384), Expect = 4e-37 Identities = 73/86 (84%), Positives = 75/86 (87%) Frame = -1 Query: 429 MVLQNDIDLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPG 250 MVLQNDIDLLNPPA KRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVC Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN 60 Query: 249 CQTVLCQPTGGKARLTEGCSFRRKGD 172 CQT+LCQPTGGKA+LTEGCSFRRKGD Sbjct: 61 CQTILCQPTGGKAKLTEGCSFRRKGD 86
>RS27A_ARATH (O64650) 40S ribosomal protein S27-1| Length = 84 Score = 142 bits (358), Expect = 4e-34 Identities = 68/84 (80%), Positives = 72/84 (85%) Frame = -1 Query: 429 MVLQNDIDLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPG 250 MVLQNDIDLLNPPA KRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVV+C Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGN 60 Query: 249 CQTVLCQPTGGKARLTEGCSFRRK 178 CQT+LC PTGGKA+LTEGCSFR+K Sbjct: 61 CQTLLCTPTGGKAKLTEGCSFRKK 84
>RS27D_ARATH (Q8L953) 40S ribosomal protein S27-4| Length = 84 Score = 142 bits (357), Expect = 5e-34 Identities = 69/84 (82%), Positives = 71/84 (84%) Frame = -1 Query: 429 MVLQNDIDLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPG 250 MVLQNDIDLL+PP KRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVC Sbjct: 1 MVLQNDIDLLHPPPELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN 60 Query: 249 CQTVLCQPTGGKARLTEGCSFRRK 178 CQTVLCQPTGGKARL EGCSFR+K Sbjct: 61 CQTVLCQPTGGKARLQEGCSFRKK 84
>RS27_CHLRE (P47903) 40S ribosomal protein S27| Length = 86 Score = 134 bits (336), Expect = 1e-31 Identities = 65/86 (75%), Positives = 68/86 (79%) Frame = -1 Query: 429 MVLQNDIDLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPG 250 MVL +DIDLLNPPA KRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVV+C Sbjct: 1 MVLSSDIDLLNPPAELEKTKHKRKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGS 60 Query: 249 CQTVLCQPTGGKARLTEGCSFRRKGD 172 C +VLC PTG RLTEGCSFRRK D Sbjct: 61 CSSVLCTPTGWPRRLTEGCSFRRKSD 86
>RS27_XENLA (P47904) 40S ribosomal protein S27| Length = 83 Score = 120 bits (301), Expect = 2e-27 Identities = 57/77 (74%), Positives = 62/77 (80%) Frame = -1 Query: 408 DLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQ 229 DLL+P KRLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C GC TVLCQ Sbjct: 5 DLLHPTPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQ 64 Query: 228 PTGGKARLTEGCSFRRK 178 PTGGKARLTEGCSFRRK Sbjct: 65 PTGGKARLTEGCSFRRK 81
>RS27_RAT (Q71TY3) 40S ribosomal protein S27| Length = 83 Score = 120 bits (301), Expect = 2e-27 Identities = 57/77 (74%), Positives = 62/77 (80%) Frame = -1 Query: 408 DLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQ 229 DLL+P KRLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C GC TVLCQ Sbjct: 5 DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQ 64 Query: 228 PTGGKARLTEGCSFRRK 178 PTGGKARLTEGCSFRRK Sbjct: 65 PTGGKARLTEGCSFRRK 81
>RS27_MOUSE (Q6ZWU9) 40S ribosomal protein S27| Length = 83 Score = 120 bits (301), Expect = 2e-27 Identities = 57/77 (74%), Positives = 62/77 (80%) Frame = -1 Query: 408 DLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQ 229 DLL+P KRLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C GC TVLCQ Sbjct: 5 DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQ 64 Query: 228 PTGGKARLTEGCSFRRK 178 PTGGKARLTEGCSFRRK Sbjct: 65 PTGGKARLTEGCSFRRK 81
>RS27_HUMAN (P42677) 40S ribosomal protein S27 (Metallopan-stimulin 1) (MPS-1)| Length = 83 Score = 120 bits (301), Expect = 2e-27 Identities = 57/77 (74%), Positives = 62/77 (80%) Frame = -1 Query: 408 DLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQ 229 DLL+P KRLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C GC TVLCQ Sbjct: 5 DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQ 64 Query: 228 PTGGKARLTEGCSFRRK 178 PTGGKARLTEGCSFRRK Sbjct: 65 PTGGKARLTEGCSFRRK 81
>RS27L_RAT (P24051) 40S ribosomal protein S27-like protein| Length = 83 Score = 120 bits (301), Expect = 2e-27 Identities = 57/77 (74%), Positives = 62/77 (80%) Frame = -1 Query: 408 DLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQ 229 DLL+P KRLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C GC TVLCQ Sbjct: 5 DLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQ 64 Query: 228 PTGGKARLTEGCSFRRK 178 PTGGKARLTEGCSFRRK Sbjct: 65 PTGGKARLTEGCSFRRK 81
>RS27L_MOUSE (Q6ZWY3) 40S ribosomal protein S27-like protein| Length = 83 Score = 120 bits (301), Expect = 2e-27 Identities = 57/77 (74%), Positives = 62/77 (80%) Frame = -1 Query: 408 DLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQ 229 DLL+P KRLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C GC TVLCQ Sbjct: 5 DLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQ 64 Query: 228 PTGGKARLTEGCSFRRK 178 PTGGKARLTEGCSFRRK Sbjct: 65 PTGGKARLTEGCSFRRK 81
>RS27L_HUMAN (Q71UM5) 40S ribosomal protein S27-like protein| Length = 83 Score = 120 bits (301), Expect = 2e-27 Identities = 57/77 (74%), Positives = 62/77 (80%) Frame = -1 Query: 408 DLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQ 229 DLL+P KRLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C GC TVLCQ Sbjct: 5 DLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQ 64 Query: 228 PTGGKARLTEGCSFRRK 178 PTGGKARLTEGCSFRRK Sbjct: 65 PTGGKARLTEGCSFRRK 81
>RS27L_BOVIN (Q3T0B7) 40S ribosomal protein S27-like protein| Length = 83 Score = 120 bits (301), Expect = 2e-27 Identities = 57/77 (74%), Positives = 62/77 (80%) Frame = -1 Query: 408 DLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQ 229 DLL+P KRLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C GC TVLCQ Sbjct: 5 DLLHPSLDEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQ 64 Query: 228 PTGGKARLTEGCSFRRK 178 PTGGKARLTEGCSFRRK Sbjct: 65 PTGGKARLTEGCSFRRK 81
>RS27_PONPY (Q5RBK1) 40S ribosomal protein S27| Length = 83 Score = 117 bits (294), Expect = 1e-26 Identities = 56/77 (72%), Positives = 61/77 (79%) Frame = -1 Query: 408 DLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQ 229 D L+P KRLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C GC TVLCQ Sbjct: 5 DPLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQ 64 Query: 228 PTGGKARLTEGCSFRRK 178 PTGGKARLTEGCSFRRK Sbjct: 65 PTGGKARLTEGCSFRRK 81
>RS27_SCHPO (O74330) 40S ribosomal protein S27| Length = 83 Score = 117 bits (292), Expect = 2e-26 Identities = 55/78 (70%), Positives = 60/78 (76%) Frame = -1 Query: 411 IDLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLC 232 +DLLNP K+LVQ P SFFMDVKC GCFNITTVFSH+QTVV+C C +VLC Sbjct: 5 VDLLNPSHESEMRKHKLKQLVQGPRSFFMDVKCPGCFNITTVFSHAQTVVICGSCASVLC 64 Query: 231 QPTGGKARLTEGCSFRRK 178 QPTGGKARL EGCSFRRK Sbjct: 65 QPTGGKARLMEGCSFRRK 82
>RS27_HOMAM (P55833) 40S ribosomal protein S27| Length = 83 Score = 114 bits (284), Expect = 1e-25 Identities = 53/77 (68%), Positives = 60/77 (77%) Frame = -1 Query: 408 DLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQ 229 DLL+P KRLVQ PNS+FMDVKC GCF I+TVFSH+QTVV C GC TVLCQ Sbjct: 5 DLLHPSPSEEKRKCKLKRLVQHPNSYFMDVKCPGCFKISTVFSHAQTVVACVGCATVLCQ 64 Query: 228 PTGGKARLTEGCSFRRK 178 PTGGKA+LT+GCSFR+K Sbjct: 65 PTGGKAKLTDGCSFRKK 81
>RS27B_YEAST (P38711) 40S ribosomal protein S27-B (YS20) (RP61)| Length = 82 Score = 104 bits (260), Expect = 9e-23 Identities = 49/77 (63%), Positives = 55/77 (71%) Frame = -1 Query: 408 DLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQ 229 DLL+P A K LVQ P S+F+DVKC GC NITTVFSH+QT V C C TVLC Sbjct: 6 DLLHPTAASEARKHKLKTLVQGPRSYFLDVKCPGCLNITTVFSHAQTAVTCESCSTVLCT 65 Query: 228 PTGGKARLTEGCSFRRK 178 PTGGKA+L+EG SFRRK Sbjct: 66 PTGGKAKLSEGTSFRRK 82
>RS27A_YEAST (P35997) 40S ribosomal protein S27-A (YS20) (RP61)| Length = 82 Score = 104 bits (259), Expect = 1e-22 Identities = 48/77 (62%), Positives = 55/77 (71%) Frame = -1 Query: 408 DLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQ 229 DLL+P A K LVQ P S+F+DVKC GC NITTVFSH+QT V C C T+LC Sbjct: 6 DLLHPTAASEARKHKLKTLVQGPRSYFLDVKCPGCLNITTVFSHAQTAVTCESCSTILCT 65 Query: 228 PTGGKARLTEGCSFRRK 178 PTGGKA+L+EG SFRRK Sbjct: 66 PTGGKAKLSEGTSFRRK 82
>RS27_ENTHI (P38654) 40S ribosomal protein S27 (EHZC3 protein)| Length = 84 Score = 80.1 bits (196), Expect = 2e-15 Identities = 37/79 (46%), Positives = 49/79 (62%) Frame = -1 Query: 414 DIDLLNPPAXXXXXXXXXKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVL 235 ++DLLNP A KRLV +PNS+F+++KC C TT FSH+ ++C C L Sbjct: 5 EVDLLNPTAASEAKAHKMKRLVPTPNSYFLEIKCPKCGATTTTFSHAHRQILCQKCGQPL 64 Query: 234 CQPTGGKARLTEGCSFRRK 178 QPTGGK +LT+ C FR K Sbjct: 65 GQPTGGKLKLTQQCKFRIK 83
>RS27_SULTO (Q973F9) 30S ribosomal protein S27e| Length = 66 Score = 49.3 bits (116), Expect = 4e-06 Identities = 23/50 (46%), Positives = 29/50 (58%) Frame = -1 Query: 354 LVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARL 205 L+ P S F+ +KC C N TVFSH+ V C C T L P GGKA++ Sbjct: 8 LIPEPKSKFIRIKCPNCGNEQTVFSHATFPVRCLSCGTQLVYPRGGKAKI 57
>RS27_AERPE (Q9YF01) 30S ribosomal protein S27e| Length = 73 Score = 47.8 bits (112), Expect = 1e-05 Identities = 24/50 (48%), Positives = 28/50 (56%) Frame = -1 Query: 354 LVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARL 205 L+ P S F+ V C C N VFSHS C C VL +PTGGKAR+ Sbjct: 15 LIPRPRSRFLLVTCPKCGNRQVVFSHSTFRARCLNCGEVLVEPTGGKARI 64
>RS27_PYRAE (Q8ZTY4) 30S ribosomal protein S27e| Length = 67 Score = 47.4 bits (111), Expect = 2e-05 Identities = 23/50 (46%), Positives = 28/50 (56%) Frame = -1 Query: 354 LVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARL 205 L+ P S F+ +C C N FSH+ VV C C VL PTGGKA+L Sbjct: 9 LIPQPKSKFIKTRCPDCGNEQITFSHAAMVVRCLVCGRVLAIPTGGKAKL 58
>RS27_SULSO (Q97Z80) 30S ribosomal protein S27e| Length = 66 Score = 46.6 bits (109), Expect = 3e-05 Identities = 22/50 (44%), Positives = 28/50 (56%) Frame = -1 Query: 354 LVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARL 205 L+ P S F+ VKC C N T+FSH+ V C C T L GGKA++ Sbjct: 8 LIPEPKSRFLRVKCPNCGNEQTIFSHATFPVRCLSCGTELVYSMGGKAKI 57
>RS27_PYRKO (Q5JE50) 30S ribosomal protein S27e| Length = 65 Score = 46.2 bits (108), Expect = 4e-05 Identities = 23/47 (48%), Positives = 26/47 (55%) Frame = -1 Query: 354 LVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGK 214 L+ P S F+ VKC C N VFSH T V C C L +PTGGK Sbjct: 7 LIPMPRSRFLRVKCIDCGNEQIVFSHPATPVRCLVCGATLVEPTGGK 53
>RS27_METKA (Q8TY87) 30S ribosomal protein S27e| Length = 73 Score = 45.4 bits (106), Expect = 6e-05 Identities = 21/50 (42%), Positives = 29/50 (58%) Frame = -1 Query: 354 LVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARL 205 LV P S F+ V+C C N +F ++ T V C C L +PTGGKA++ Sbjct: 15 LVPQPRSRFLRVECVDCGNEQIIFGNASTEVKCHICGRTLAKPTGGKAKI 64
>RS27_PYRFU (Q8U474) 30S ribosomal protein S27e| Length = 63 Score = 45.1 bits (105), Expect = 8e-05 Identities = 22/47 (46%), Positives = 26/47 (55%) Frame = -1 Query: 354 LVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGK 214 ++ P S F+ VKC C N VFSH T V C C L +PTGGK Sbjct: 5 IIPMPRSRFLRVKCIDCGNEQIVFSHPATKVRCLICGATLVEPTGGK 51
>RS27_PYRAB (Q9UXZ3) 30S ribosomal protein S27e| Length = 65 Score = 45.1 bits (105), Expect = 8e-05 Identities = 22/47 (46%), Positives = 26/47 (55%) Frame = -1 Query: 354 LVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGK 214 ++ P S F+ VKC C N VFSH T V C C L +PTGGK Sbjct: 7 VIPMPRSRFLRVKCIDCGNEQIVFSHPATRVRCNVCGATLVEPTGGK 53
>RS27_PYRHO (P58078) 30S ribosomal protein S27e| Length = 65 Score = 44.7 bits (104), Expect = 1e-04 Identities = 22/47 (46%), Positives = 26/47 (55%) Frame = -1 Query: 354 LVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGK 214 ++ P S F+ VKC C N VFSH T V C C L +PTGGK Sbjct: 7 VIPMPRSRFLRVKCIDCGNEQIVFSHPATRVRCLVCGATLVEPTGGK 53
>RS27_METMA (P61932) 30S ribosomal protein S27e| Length = 62 Score = 44.3 bits (103), Expect = 1e-04 Identities = 19/49 (38%), Positives = 26/49 (53%) Frame = -1 Query: 348 QSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLT 202 Q P S F+ VKC C N +F + + C C L +PTGGK+ +T Sbjct: 6 QRPKSRFLRVKCNDCENEQIIFGSASRKITCVVCGRTLAEPTGGKSTIT 54
>RS27_METAC (P61931) 30S ribosomal protein S27e| Length = 62 Score = 44.3 bits (103), Expect = 1e-04 Identities = 19/49 (38%), Positives = 26/49 (53%) Frame = -1 Query: 348 QSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLT 202 Q P S F+ VKC C N +F + + C C L +PTGGK+ +T Sbjct: 6 QRPKSRFLRVKCNDCENEQIIFGSASRKITCVVCGRTLAEPTGGKSTIT 54
>RS27_HALSA (Q9HRT7) 30S ribosomal protein S27e| Length = 57 Score = 43.5 bits (101), Expect = 2e-04 Identities = 20/42 (47%), Positives = 25/42 (59%) Frame = -1 Query: 330 FMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARL 205 F +V+C C N TVF + T V C C T L +PTGG+A L Sbjct: 5 FYNVECPDCENEQTVFGKASTEVACAVCGTTLARPTGGEADL 46
>RS27_METJA (P54028) 30S ribosomal protein S27e| Length = 62 Score = 42.4 bits (98), Expect = 5e-04 Identities = 20/50 (40%), Positives = 27/50 (54%) Frame = -1 Query: 354 LVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARL 205 L+ P + F+ V+C C N VF TVV C C VL +P GGK ++ Sbjct: 4 LIPQPRTKFLRVQCPECNNEQIVFGSPATVVKCLTCGKVLVEPRGGKGKV 53
>RS27_SULAC (Q4J9B1) 30S ribosomal protein S27e| Length = 66 Score = 42.0 bits (97), Expect = 7e-04 Identities = 23/60 (38%), Positives = 33/60 (55%) Frame = -1 Query: 354 LVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLTEGCSFRRKG 175 L+ P S F+ VKC+ C N +FS++ V C C + P GGKA++ EG + R G Sbjct: 8 LIPEPKSKFIRVKCRQCNNEQVIFSNATFPVRCLSCGAQIVIPKGGKAKI-EGDTVRILG 66
>RS27_ARCFU (O28935) 30S ribosomal protein S27e| Length = 58 Score = 41.2 bits (95), Expect = 0.001 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = -1 Query: 339 NSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARL 205 +S F+ VKC C + +F H T+V C C + +PTGGK + Sbjct: 2 HSRFVKVKCPDCEHEQVIFDHPSTIVKCIICGRTVAEPTGGKGNI 46
>RS27_THEVO (Q97BP1) 30S ribosomal protein S27e| Length = 65 Score = 40.8 bits (94), Expect = 0.002 Identities = 15/38 (39%), Positives = 23/38 (60%) Frame = -1 Query: 330 FMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGG 217 F+ +KC+ C N+ VF+ +VV C C + +PTGG Sbjct: 16 FLKIKCKDCGNVQVVFARPSSVVTCNICGATIAKPTGG 53
>RS27_THEAC (Q9HIX2) 30S ribosomal protein S27e| Length = 65 Score = 40.8 bits (94), Expect = 0.002 Identities = 15/41 (36%), Positives = 23/41 (56%) Frame = -1 Query: 339 NSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGG 217 N F+ +KC+ C N+ VF+ + V C C + +PTGG Sbjct: 13 NGHFVKIKCRDCGNVQVVFARPSSTVTCNICGATIAKPTGG 53
>RS27_METTH (O27364) 30S ribosomal protein S27e| Length = 63 Score = 38.5 bits (88), Expect = 0.008 Identities = 17/42 (40%), Positives = 24/42 (57%) Frame = -1 Query: 330 FMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARL 205 F+ VKC C N VF + + V C C L +PTGGK+++ Sbjct: 13 FLRVKCLDCGNQQVVFDRAASYVQCIICGKTLVEPTGGKSKI 54
>RL34_AEDTR (Q9NB34) 60S ribosomal protein L34| Length = 138 Score = 29.3 bits (64), Expect = 4.7 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = -2 Query: 224 PVARPG*LRAAPSAARATKPLKAT*KSK 141 PV++P + AP+AA A KP K KSK Sbjct: 111 PVSKPPKIAKAPAAAAAAKPAKTATKSK 138
>IF2_MYCPE (Q8EWU0) Translation initiation factor IF-2| Length = 620 Score = 29.3 bits (64), Expect = 4.7 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Frame = -1 Query: 246 QTVLCQPTGGKARLTEGCSFRRKG-D*TFEGYLKKQAIVEL*VSPGR*SEDFALSAS 79 + VLC+ GGK + +G + +G D E + I+EL +P R + + AS Sbjct: 254 KNVLCEEWGGKTMVIKGSALNNQGIDELLEAIIVTAEIMELKANPKRLANGITIEAS 310
>GLHA_ACALA (P30970) Glycoprotein hormones alpha chain precursor (Gonadotropin| alpha chain) (GTH-alpha) Length = 117 Score = 28.9 bits (63), Expect = 6.2 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Frame = -1 Query: 342 PNSFFMDVKCQGC-FNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLT 202 PN+ ++ C+ C TVFS + + C GC PT KA T Sbjct: 25 PNTDLSNMGCEACTLRKNTVFSRDRPIYQCMGCCFSRAYPTPLKAMKT 72
>HIS51_PROMM (Q7V959) Imidazole glycerol phosphate synthase subunit hisH1 (EC| 2.4.2.-) (IGP synthase glutamine amidotransferase subunit) (IGP synthase subunit hisH1) (ImGP synthase subunit hisH1) (IGPS subunit hisH1) Length = 216 Score = 28.5 bits (62), Expect = 8.1 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = +2 Query: 197 PSVSLALPPVGWQSTVW 247 PS +LALP VGW S W Sbjct: 119 PSQNLALPHVGWNSVYW 135
>DPOE1_MOUSE (Q9WVF7) DNA polymerase epsilon, catalytic subunit A (EC 2.7.7.7)| (DNA polymerase II subunit A) Length = 2283 Score = 28.5 bits (62), Expect = 8.1 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = +2 Query: 185 RKEQPSVSLALPPVGWQSTVWQPGHT-TTVWEWLNTVVMLKQPWHLTSMKK 334 +KE ++L +P WQ + QP TT EWL + K+ W L + ++ Sbjct: 1238 QKESQDIALTVP---WQEVLGQPPSLGTTQEEWLVWLQFHKKKWQLQAQQR 1285 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,394,564 Number of Sequences: 219361 Number of extensions: 1054983 Number of successful extensions: 2665 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 2603 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2665 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
