>BP73_ORYSA (Q8L4E7) SAP-like protein BP-73 (OsBP-73) (Riaa1)|
          Length = 375

 Score = 72.4 bits (176), Expect = 8e-13
 Identities = 48/101 (47%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
 Frame = -1

Query: 560 VIAAEDASLDDFV-VPDDEXDLLDTSEPDDYLXPLXXXXXXXXXXXXXXXXXXXSQEGSP 384
           VI  E+ SLDD   + DDE D  DT EP                          S  G P
Sbjct: 278 VIEPENLSLDDLDHISDDEPDASDTDEPSGEYDEPSLQIPSVPIIDESHDTTLKSSLGGP 337

Query: 383 SLEVSDLSSLKVTELRELAKSRGLRGYSKMKKSDLVALLSD 261
                DLS+LKVTELRELAKSRG++GYSKMKK+DLV LLS+
Sbjct: 338 -----DLSTLKVTELRELAKSRGIKGYSKMKKNDLVELLSN 373

>RHO_THEMA (P38527) Transcription termination factor rho (EC 3.6.1.-)|
           (ATP-dependent helicase rho)
          Length = 427

 Score = 37.7 bits (86), Expect = 0.022
 Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
 Frame = -1

Query: 395 EGSPSLEVSDLSSLKVTELRELAKSRGLRGYSKMKKSDLV-ALLSDAS*SVG 243
           E   ++ +S+L S+ + +L E+AKS G+  Y+ M+K DL+ A+L   + S G
Sbjct: 3   EEQKTISISELESMNIKQLYEIAKSLGIPRYTSMRKRDLIFAILKAQTESTG 54

>RHO_MYCLE (P45835) Transcription termination factor rho (EC 3.6.1.-)|
           (ATP-dependent helicase rho)
          Length = 610

 Score = 37.7 bits (86), Expect = 0.022
 Identities = 21/63 (33%), Positives = 34/63 (53%)
 Frame = -1

Query: 383 SLEVSDLSSLKVTELRELAKSRGLRGYSKMKKSDLVALLSDAS*SVGDANPARAXRFASL 204
           ++ +  LS++ + ELR LA   G++G S M+KS+L+A + +     G AN        S 
Sbjct: 35  TVSLGSLSTMVLPELRALANQAGVKGTSGMRKSELIAAIEECR---GQANGTSVNDGPSR 91

Query: 203 SHG 195
            HG
Sbjct: 92  DHG 94

>RHO_MICLU (P52154) Transcription termination factor rho (EC 3.6.1.-)|
           (ATP-dependent helicase rho)
          Length = 690

 Score = 37.4 bits (85), Expect = 0.029
 Identities = 17/35 (48%), Positives = 26/35 (74%)
 Frame = -1

Query: 365 LSSLKVTELRELAKSRGLRGYSKMKKSDLVALLSD 261
           L+SLK+ +L+ LA   G+ G S+M+K+DLV  +SD
Sbjct: 15  LASLKLAQLQALASQLGIAGGSRMRKADLVTAISD 49

>VL96_IRV1 (P22856) L96 protein|
          Length = 867

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
 Frame = -1

Query: 386 PSLEVSDLSSLKVTELRELAKSRGLRGY-----SKMKKSDLVALL 267
           P    +DL   KV EL+ELAK  GL+ +     SKM K DLV  L
Sbjct: 268 PKYRAADLLGKKVVELKELAKMEGLKKWKDKTPSKMLKQDLVDFL 312

>RHO_STRLI (P52157) Transcription termination factor rho (EC 3.6.1.-)|
           (ATP-dependent helicase rho)
          Length = 707

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 21/66 (31%), Positives = 39/66 (59%)
 Frame = -1

Query: 392 GSPSLEVSDLSSLKVTELRELAKSRGLRGYSKMKKSDLVALLSDAS*SVGDANPARAXRF 213
           GS     + L  + + EL+++A   G+RG ++M+KS L+ ++ +A  + G A PA+A   
Sbjct: 31  GSRRRRGTGLEGMVLAELQQVASGLGIRGTARMRKSQLIEVIKEAQ-AAGGA-PAKAAPA 88

Query: 212 ASLSHG 195
           A+ + G
Sbjct: 89  AADTAG 94

>RHO_NEIGO (Q06447) Transcription termination factor rho (EC 3.6.1.-)|
           (ATP-dependent helicase rho)
          Length = 419

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 13/35 (37%), Positives = 24/35 (68%)
 Frame = -1

Query: 380 LEVSDLSSLKVTELRELAKSRGLRGYSKMKKSDLV 276
           + VS+L +L +++L ELA+  G+   ++ +K DLV
Sbjct: 1   MHVSELQTLHISKLLELAEEHGIENANRFRKQDLV 35

>RHO_MYCTU (P66028) Transcription termination factor rho (EC 3.6.1.-)|
           (ATP-dependent helicase rho)
          Length = 602

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 13/35 (37%), Positives = 25/35 (71%)
 Frame = -1

Query: 365 LSSLKVTELRELAKSRGLRGYSKMKKSDLVALLSD 261
           L+++ + ELR LA   G++G S M+K++L+A + +
Sbjct: 37  LATMVLPELRALANRAGVKGTSGMRKNELIAAIEE 71

>RHO_MYCBO (P66029) Transcription termination factor rho (EC 3.6.1.-)|
           (ATP-dependent helicase rho)
          Length = 602

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 13/35 (37%), Positives = 25/35 (71%)
 Frame = -1

Query: 365 LSSLKVTELRELAKSRGLRGYSKMKKSDLVALLSD 261
           L+++ + ELR LA   G++G S M+K++L+A + +
Sbjct: 37  LATMVLPELRALANRAGVKGTSGMRKNELIAAIEE 71

>ECR_BOMMO (P49881) Ecdysone receptor (Ecdysteroid receptor)|
           (20-hydroxy-ecdysone receptor) (20E receptor) (EcRH)
          Length = 606

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 21/60 (35%), Positives = 33/60 (55%)
 Frame = -1

Query: 386 PSLEVSDLSSLKVTELRELAKSRGLRGYSKMKKSDLVALLSDAS*SVGDANPARAXRFAS 207
           P  ++++++ L V  + E AK  GL G+SK+ +SD + LL  +S  V     AR    AS
Sbjct: 394 PFRQITEMTILTVQLIVEFAK--GLPGFSKISQSDQITLLKASSSEVMMLRVARRYDAAS 451

>RHO_BACSU (Q03222) Transcription termination factor rho (EC 3.6.1.-)|
           (ATP-dependent helicase rho)
          Length = 427

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = -1

Query: 380 LEVSDLSSLKVTELRELAKSRGLRGYSKMKKSDLVALLSDAS 255
           + +S L ++K+ EL ELA+   +  YSK+ K +L+  +  A+
Sbjct: 4   VSISSLENMKLKELYELARHYKISYYSKLTKKELIFAILKAN 45

>TP53B_HUMAN (Q12888) Tumor suppressor p53-binding protein 1 (p53-binding protein|
            1) (p53BP1) (53BP1)
          Length = 1972

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 20/62 (32%), Positives = 28/62 (45%)
 Frame = +1

Query: 202  LREAKRXARAGLASPTDQEASLSSATKSLFFIFE*PRSPRDFASSLSSVTLSELRSETSR 381
            L E KR  R+ ++SP    AS SS+T     I E PR+     S    +  SE     ++
Sbjct: 1622 LVEGKRKRRSNVSSPATPTASSSSSTTPTRKITESPRASMGVLSGKRKLITSEEERSPAK 1681

Query: 382  EG 387
             G
Sbjct: 1682 RG 1683

>EFTS_BACHK (Q6HEY9) Elongation factor Ts (EF-Ts)|
          Length = 295

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +3

Query: 90  AKIGEKLTLLIYNFLSKKKGTGLGE-IGMGRSFVHMTMAEGSKTXGSSR 233
           AKIGEKLTL  +  +SK      G  + MG     +T+ EGS    +++
Sbjct: 130 AKIGEKLTLRRFEIVSKTDADAFGAYLHMGGRIGVLTVLEGSTDEAAAK 178

>EFTS_BACCZ (Q636K0) Elongation factor Ts (EF-Ts)|
          Length = 295

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +3

Query: 90  AKIGEKLTLLIYNFLSKKKGTGLGE-IGMGRSFVHMTMAEGSKTXGSSR 233
           AKIGEKLTL  +  +SK      G  + MG     +T+ EGS    +++
Sbjct: 130 AKIGEKLTLRRFEIVSKTDADAFGAYLHMGGRIGVLTVLEGSTDEAAAK 178

>EFTS_BACCR (Q812X3) Elongation factor Ts (EF-Ts)|
          Length = 295

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +3

Query: 90  AKIGEKLTLLIYNFLSKKKGTGLGE-IGMGRSFVHMTMAEGSKTXGSSR 233
           AKIGEKLTL  +  +SK      G  + MG     +T+ EGS    +++
Sbjct: 130 AKIGEKLTLRRFEIVSKTDADAFGAYLHMGGRIGVLTVLEGSTDEAAAK 178

>EFTS_BACC1 (Q732P3) Elongation factor Ts (EF-Ts)|
          Length = 295

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +3

Query: 90  AKIGEKLTLLIYNFLSKKKGTGLGE-IGMGRSFVHMTMAEGSKTXGSSR 233
           AKIGEKLTL  +  +SK      G  + MG     +T+ EGS    +++
Sbjct: 130 AKIGEKLTLRRFEIVSKTDADAFGAYLHMGGRIGVLTVLEGSTDEAAAK 178

>EFTS_BACAN (Q81WK9) Elongation factor Ts (EF-Ts)|
          Length = 295

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +3

Query: 90  AKIGEKLTLLIYNFLSKKKGTGLGE-IGMGRSFVHMTMAEGSKTXGSSR 233
           AKIGEKLTL  +  +SK      G  + MG     +T+ EGS    +++
Sbjct: 130 AKIGEKLTLRRFEIVSKTDADAFGAYLHMGGRIGVLTVLEGSTDEAAAK 178

>ECR_MANSE (P49883) Ecdysone receptor (Ecdysteroid receptor)|
           (20-hydroxy-ecdysone receptor) (20E receptor) (EcRH)
          Length = 556

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 16/44 (36%), Positives = 28/44 (63%)
 Frame = -1

Query: 386 PSLEVSDLSSLKVTELRELAKSRGLRGYSKMKKSDLVALLSDAS 255
           P  ++++++ L V  + E AK  GL G+SK+ +SD + LL  +S
Sbjct: 336 PFRQITEMTILTVQLIVEFAK--GLPGFSKISQSDQITLLKASS 377

>AMPA_FUSNN (Q8RHT8) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine|
           aminopeptidase) (LAP) (Leucyl aminopeptidase)
          Length = 478

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +3

Query: 39  LTNQART*QPKETADRSAKIGEKLTLLIYNFLSKKKGTGLG 161
           +  QA    PKE ADR+ K+G+K    +   L +KK   LG
Sbjct: 168 VNEQAEVLNPKELADRATKLGKKFGFDV-EILDEKKAQKLG 207


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,223,634
Number of Sequences: 219361
Number of extensions: 982714
Number of successful extensions: 2527
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2526
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4585734400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)