>MUC1_MESAU (Q60528) Mucin-1 precursor|
          Length = 676

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 25/92 (27%), Positives = 39/92 (42%)
 Frame = -1

Query: 625 SSRTDASDPQHRKAYGIITSSRTDTSVPEYHKLSPWQPPASAAVEEAMPPVPVLKAMEPI 446
           S+   A+ P H  +   +TSS  D++    H  S   PP S+AV  A  PV    +  P+
Sbjct: 152 SAVNSATTPVHSGSSAPVTSSAVDSATTPVHSGSS-APPTSSAVNSATTPVH-SGSSAPV 209

Query: 445 KRSASYCKEPPLSLKAMEPIKRSSSCCKEPPI 350
             SA      P+   +  P+  S+      P+
Sbjct: 210 TSSAVNSATTPVHSGSSAPVTSSAVNSATTPV 241



 Score = 30.0 bits (66), Expect = 5.8
 Identities = 24/92 (26%), Positives = 39/92 (42%)
 Frame = -1

Query: 625 SSRTDASDPQHRKAYGIITSSRTDTSVPEYHKLSPWQPPASAAVEEAMPPVPVLKAMEPI 446
           S+   A+ P H  +   +TSS  +++    H  S   PP S+AV  A  PV    +  P+
Sbjct: 92  SAVNSATTPVHSGSSAPVTSSAVNSATTPVHSGSS-APPTSSAVNSATTPVH-SGSSAPV 149

Query: 445 KRSASYCKEPPLSLKAMEPIKRSSSCCKEPPI 350
             SA      P+   +  P+  S+      P+
Sbjct: 150 TSSAVNSATTPVHSGSSAPVTSSAVDSATTPV 181

>PER2_MOUSE (O54943) Period circadian protein 2 (mPER2)|
          Length = 1257

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
 Frame = -1

Query: 625 SSRTDASDPQHRKAYGII-TSSRTDTSVPEYHKLSPWQPPASAAVEEAMPPVPVLKAMEP 449
           SS ++  +  HR+  GI  TS +  T     H+ S  Q  AS A  ++ PP  V KA+  
Sbjct: 498 SSDSNGQEESHRRRSGIFKTSGKIQTKSHVSHE-SGGQKEASVAEMQSSPPAQV-KAVTT 555

Query: 448 IKRSASYCKEPPLSLKAMEPIKRSSSC 368
           I+R +S    P  S       K    C
Sbjct: 556 IERDSSGASLPKASFPEELAYKNQPPC 582

>BSN_MOUSE (O88737) Bassoon protein|
          Length = 3941

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 20/72 (27%), Positives = 31/72 (43%)
 Frame = -1

Query: 568 SSRTDTSVPEYHKLSPWQPPASAAVEEAMPPVPVLKAMEPIKRSASYCKEPPLSLKAMEP 389
           S +   + P+  K SP    AS    +A P    L+A EP K S+S  ++   +    EP
Sbjct: 571 SPQATKASPQATKASPQATKASPQTTKASPQAKPLRATEPSKTSSSAQEKKTATPAKAEP 630

Query: 388 IKRSSSCCKEPP 353
           + +       PP
Sbjct: 631 VPKPPPETTVPP 642

>OTX1L_BRARE (Q90267) Homeobox protein Otx1l (ZOTX3)|
          Length = 338

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -1

Query: 625 SSRTDASDPQHRKAYGIITSSRTDTSVPEYHKLSPWQP-PASAAVEEAMPP 476
           SS +  S+P      G+I+SS + T VP     +P  P PA  ++ +  PP
Sbjct: 140 SSSSSGSNPSALSGVGLISSSSSGTPVPSIWSPAPVSPVPAPPSLPDISPP 190

>WASF1_MOUSE (Q8R5H6) Wiskott-Aldrich syndrome protein family member 1|
           (WASP-family protein member 1) (WAVE-1 protein)
          Length = 559

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
 Frame = -1

Query: 553 TSVPEYHKLSPWQPPASAAVEEAMPPVPVLKAMEP-IKRSASYCKEPPLSLKAMEPIKRS 377
           TS P      P  PPA+A    A+PP P    + P +   A     PPL ++   P+ R+
Sbjct: 345 TSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPL-VQPSPPVARA 403

Query: 376 SSCCKEPPISML 341
           +  C+  P+  L
Sbjct: 404 APVCETVPVHPL 415

>WASF1_HUMAN (Q92558) Wiskott-Aldrich syndrome protein family member 1|
           (WASP-family protein member 1) (WAVE-1 protein)
           (Verprolin homology domain-containing protein 1)
          Length = 559

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
 Frame = -1

Query: 553 TSVPEYHKLSPWQPPASAAVEEAMPPVPVLKAMEP-IKRSASYCKEPPLSLKAMEPIKRS 377
           TS P      P  PPA+A    A+PP P    + P +   A     PPL ++   P+ R+
Sbjct: 345 TSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPL-VQPSPPVARA 403

Query: 376 SSCCKEPPISML 341
           +  C+  P+  L
Sbjct: 404 APVCETVPVHPL 415

>UBE1L_HUMAN (P41226) Ubiquitin-activating enzyme E1 homolog (D8)|
          Length = 1011

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 17/59 (28%), Positives = 28/59 (47%)
 Frame = -1

Query: 523 PWQPPASAAVEEAMPPVPVLKAMEPIKRSASYCKEPPLSLKAMEPIKRSSSCCKEPPIS 347
           PW P  +  V      V + + +EP+KR+     E PL    +  +  SS+ C EP ++
Sbjct: 310 PWDPVDAETV------VGLARDLEPLKRTEEEPLEEPLDEALVRTVALSSARCLEPMVA 362

>PEXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precursor (PELP)|
          Length = 426

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 22/66 (33%), Positives = 27/66 (40%)
 Frame = -1

Query: 550 SVPEYHKLSPWQPPASAAVEEAMPPVPVLKAMEPIKRSASYCKEPPLSLKAMEPIKRSSS 371
           S P+     P QPP +       PP PV KA  P    A     PP  +KA  P   +  
Sbjct: 159 SPPDQSAKQPPQPPPAKQPSPPPPPPPV-KAPSP--SPAKQPPPPPPPVKAPSPSPATQP 215

Query: 370 CCKEPP 353
             K+PP
Sbjct: 216 PTKQPP 221

>HEM1_CHICK (P07997) 5-aminolevulinate synthase, nonspecific, mitochondrial|
           precursor (EC 2.3.1.37) (5-aminolevulinic acid synthase)
           (Delta-aminolevulinate synthase) (Delta-ALA synthetase)
           (ALAS-H)
          Length = 635

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 25/78 (32%), Positives = 35/78 (44%)
 Frame = -1

Query: 616 TDASDPQHRKAYGIITSSRTDTSVPEYHKLSPWQPPASAAVEEAMPPVPVLKAMEPIKRS 437
           T A+ P+ +KA  +     TD S P      P   P +AAV+ +    P L A    K S
Sbjct: 61  TPAAQPEAKKAKEV-AQQNTDGSQP------PAGHPPAAAVQSSATKCPFLAAQMNHKSS 113

Query: 436 ASYCKEPPLSLKAMEPIK 383
             +CK    SL+  E +K
Sbjct: 114 NVFCK---ASLELQEDVK 128

>CEF1_ASHGO (Q756C3) Pre-mRNA-splicing factor CEF1|
          Length = 477

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 5/71 (7%)
 Frame = -1

Query: 529 LSPWQPPASAAVEEAMPPVPVL-----KAMEPIKRSASYCKEPPLSLKAMEPIKRSSSCC 365
           L PW+PP    +    PP P L     +A+         C + P  L+  E I+R+ +  
Sbjct: 332 LLPWEPPLRQDLPPPPPPPPGLLAEHYRALAAAAAGGPACYDTPDVLRQREAIERALAA- 390

Query: 364 KEPPISMLSRQ 332
            EP  +ML  Q
Sbjct: 391 -EPSPAMLHPQ 400

>HIC1_HUMAN (Q14526) Hypermethylated in cancer 1 protein (Hic-1) (Zinc finger|
           and BTB domain-containing protein 29)
          Length = 733

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
 Frame = -1

Query: 529 LSPWQPPASAA-----VEEAMPPVPVLKAMEPIKRSASYCKEPPLSLKAMEPI 386
           LS   PP SAA      E  +PP P      P    A+Y KEPPL+L ++ P+
Sbjct: 244 LSKKSPPGSAAPERPLAERELPPRP---DSPPSAGPAAY-KEPPLALPSLPPL 292

>WNK4_MOUSE (Q80UE6) Serine/threonine-protein kinase WNK4 (EC 2.7.11.1)|
           (Protein kinase with no lysine 4) (Protein kinase,
           lysine-deficient 4)
          Length = 1222

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
 Frame = -1

Query: 529 LSPWQPPASAAVEEAMPPVPVLKAMEPIKRSASYCKEPPL-SLKAMEPIKRSSSCCKE 359
           LS W  PAS   E   PP     +  P +   S  KEPP  +     P+K   S C E
Sbjct: 70  LSSWSQPASLLPEPPDPP----DSAGPTRSPPSSSKEPPEGTWMGAAPVKAVDSACPE 123

>YPUB_RHOVI (P20467) Hypothetical protein in pufB 5'region (Fragment)|
          Length = 255

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -1

Query: 535 HKLSPWQPPASAAVEEAMPPVPVLKAMEPIKR 440
           HK  PW   A AA+++++  +PVL     +KR
Sbjct: 189 HKEMPWNDDARAALDDSVEALPVLIRTSAVKR 220


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,009,862
Number of Sequences: 219361
Number of extensions: 1715529
Number of successful extensions: 5244
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5232
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5767334219
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)