ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags15n20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC134346.3| Oryza sativa (japonica cultivar-group) chromosome... 357 3e-95
2gb|AC136227.2| Oryza sativa (japonica cultivar-group) chromosome... 357 3e-95
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 357 3e-95
4dbj|AK109472.1| Oryza sativa (japonica cultivar-group) cDNA clon... 357 3e-95
5gb|AY110774.1| Zea mays CL28132_1 mRNA sequence 143 8e-31
6ref|NM_129638.2| Arabidopsis thaliana unknown protein AT2G40760 ... 115 2e-22
7gb|BT025323.1| Arabidopsis thaliana At2g40760 mRNA, complete cds 115 2e-22
8dbj|AK222157.1| Arabidopsis thaliana mRNA for rhodanese like pro... 115 2e-22
9emb|BX819256.1|CNS0A8XD Arabidopsis thaliana Full-length cDNA Co... 115 2e-22
10gb|AC007660.2|AC007660 Arabidopsis thaliana chromosome II sectio... 115 2e-22
11emb|BX819012.1|CNS0A8VW Arabidopsis thaliana Full-length cDNA Co... 107 4e-20
12emb|BX820029.1|CNS0A8FQ Arabidopsis thaliana Full-length cDNA Co... 107 4e-20
13gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 58 4e-05
14gb|AC154761.2| Mus musculus BAC clone RP24-416E4 from chromosome... 42 2.2
15emb|AL603839.9| Human DNA sequence from clone RP11-656D10 on chr... 42 2.2
16emb|AL590386.5| Human DNA sequence from clone RP11-721G21 on chr... 42 2.2
17gb|AC159968.3| Mus musculus chromosome 3, clone RP23-256J12, com... 42 2.2
18gb|AC010538.9| Homo sapiens chromosome 16 clone RP11-368I7, comp... 42 2.2
19emb|AJ007973.1|HSA007973 Homo sapiens LGMD2B gene 42 2.2
20gb|AC009136.6| Homo sapiens chromosome 16 clone RP11-518J6, comp... 42 2.2
21gb|AC106736.4| Homo sapiens chromosome 16 clone CTD-2520I13, com... 42 2.2
22gb|AC010147.11| Homo sapiens BAC clone RP11-356H17 from 2, compl... 42 2.2
23gb|AC131330.25| Mus musculus chromosome 14, clone RP23-477H13, c... 40 8.6
24emb|Z81130.1|CET23G11 Caenorhabditis elegans Cosmid T23G11, comp... 40 8.6
25ref|XM_541152.2| PREDICTED: Canis familiaris similar to Pleckstr... 40 8.6
26emb|AL732325.6| Human DNA sequence from clone RP11-692N21 on chr... 40 8.6
27emb|AL354695.12| Human DNA sequence from clone RP11-265G8 on chr... 40 8.6
28emb|CR847517.1| Human DNA sequence from clone XX-NCIH2171_9D08, ... 40 8.6
29gb|AC108925.8| Homo sapiens chromosome 8, clone RP11-1136L8, com... 40 8.6
30gb|AC112506.5| Homo sapiens 3 BAC RP11-286P15 (Roswell Park Canc... 40 8.6
31gb|AC096564.3| Homo sapiens BAC clone RP11-286E11 from 4, comple... 40 8.6
32gb|AC157511.2| Mus musculus BAC clone RP24-456J10 from chromosom... 40 8.6
33dbj|AK078291.1| Mus musculus adult male olfactory brain cDNA, RI... 40 8.6
34gb|AC159549.11| Mus musculus 6 BAC RP23-304D1 (Roswell Park Canc... 40 8.6
35ref|NM_059744.1| Caenorhabditis elegans T23G11.1 (T23G11.1) mRNA... 40 8.6
36gb|AC079227.12| Homo sapiens BAC clone RP11-80B23 from 4, comple... 40 8.6
37gb|AC137625.2| Homo sapiens 3 BAC RP11-1114A3 (Roswell Park Canc... 40 8.6
38gb|AC154186.1| Mus musculus BAC clone RP24-435B3 from chromosome... 40 8.6
39gb|AC155947.8| Mus musculus 6 BAC RP24-417N21 (Roswell Park Canc... 40 8.6
40gb|AC004893.1|AC004893 Homo sapiens PAC clone RP4-808A1 from 7q2... 40 8.6
41dbj|AP008952.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 8.6
42dbj|AP008949.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 8.6 
>gb|AC134346.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0018A03,
             complete sequence
          Length = 146278

 Score =  357 bits (180), Expect = 3e-95
 Identities = 282/316 (89%)
 Strand = Plus / Minus

                                                                         
Query: 317   gcttcgagcctttttggactcctgcctttatcaggaccgccaataactccccatgtctta 376
             ||||| |||||||||||||| || ||||||||||| |||||||||||||||||||||| |
Sbjct: 17879 gcttccagcctttttggacttcttcctttatcagggccgccaataactccccatgtctca 17820

                                                                         
Query: 377   aactgccggtgccgagcccttgccctttccttctcctcctcagatctcgtggaaaagcag 436
             ||||| |  ||||| |||||||||||||||||||||||||| ||| | || | |||||| 
Sbjct: 17819 aactgtctctgccgtgcccttgccctttccttctcctcctcggatttggttgcaaagcaa 17760

                                                                         
Query: 437   tatgggcatgatacaccatactcccatttaggagattccatgtcttcgtcactaactggt 496
             ||||| |||||||||||||||||||| | |||||||||||||||||| ||||||||||||
Sbjct: 17759 tatggacatgatacaccatactcccactcaggagattccatgtcttcatcactaactggt 17700

                                                                         
Query: 497   tgtttacatccatagcagagtttgtgggttccttgagctaacccatgctccactgaaaca 556
             |  ||||||||||| || ||||||||||||||||| ||||| || ||||||||||| |||
Sbjct: 17699 ttcttacatccataacaaagtttgtgggttccttgggctaatccgtgctccactgagaca 17640

                                                                         
Query: 557   cgcttgtcaaacacgaagcattcaccctcccacaagctttcagcttccgggatttcctct 616
             || ||||||||||| |||||||||||||||||||||||||| || |  ||||||||||||
Sbjct: 17639 cgtttgtcaaacacaaagcattcaccctcccacaagctttctgccttggggatttcctct 17580

                             
Query: 617   aggtactttaatatcc 632
             |||||||| |||||||
Sbjct: 17579 aggtacttcaatatcc 17564
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>gb|AC136227.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0109A13, complete sequence
          Length = 134258

 Score =  357 bits (180), Expect = 3e-95
 Identities = 282/316 (89%)
 Strand = Plus / Minus

                                                                         
Query: 317   gcttcgagcctttttggactcctgcctttatcaggaccgccaataactccccatgtctta 376
             ||||| |||||||||||||| || ||||||||||| |||||||||||||||||||||| |
Sbjct: 93306 gcttccagcctttttggacttcttcctttatcagggccgccaataactccccatgtctca 93247

                                                                         
Query: 377   aactgccggtgccgagcccttgccctttccttctcctcctcagatctcgtggaaaagcag 436
             ||||| |  ||||| |||||||||||||||||||||||||| ||| | || | |||||| 
Sbjct: 93246 aactgtctctgccgtgcccttgccctttccttctcctcctcggatttggttgcaaagcaa 93187

                                                                         
Query: 437   tatgggcatgatacaccatactcccatttaggagattccatgtcttcgtcactaactggt 496
             ||||| |||||||||||||||||||| | |||||||||||||||||| ||||||||||||
Sbjct: 93186 tatggacatgatacaccatactcccactcaggagattccatgtcttcatcactaactggt 93127

                                                                         
Query: 497   tgtttacatccatagcagagtttgtgggttccttgagctaacccatgctccactgaaaca 556
             |  ||||||||||| || ||||||||||||||||| ||||| || ||||||||||| |||
Sbjct: 93126 ttcttacatccataacaaagtttgtgggttccttgggctaatccgtgctccactgagaca 93067

                                                                         
Query: 557   cgcttgtcaaacacgaagcattcaccctcccacaagctttcagcttccgggatttcctct 616
             || ||||||||||| |||||||||||||||||||||||||| || |  ||||||||||||
Sbjct: 93066 cgtttgtcaaacacaaagcattcaccctcccacaagctttctgccttggggatttcctct 93007

                             
Query: 617   aggtactttaatatcc 632
             |||||||| |||||||
Sbjct: 93006 aggtacttcaatatcc 92991
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  357 bits (180), Expect = 3e-95
 Identities = 282/316 (89%)
 Strand = Plus / Minus

                                                                            
Query: 317      gcttcgagcctttttggactcctgcctttatcaggaccgccaataactccccatgtctta 376
                ||||| |||||||||||||| || ||||||||||| |||||||||||||||||||||| |
Sbjct: 14866964 gcttccagcctttttggacttcttcctttatcagggccgccaataactccccatgtctca 14866905

                                                                            
Query: 377      aactgccggtgccgagcccttgccctttccttctcctcctcagatctcgtggaaaagcag 436
                ||||| |  ||||| |||||||||||||||||||||||||| ||| | || | |||||| 
Sbjct: 14866904 aactgtctctgccgtgcccttgccctttccttctcctcctcggatttggttgcaaagcaa 14866845

                                                                            
Query: 437      tatgggcatgatacaccatactcccatttaggagattccatgtcttcgtcactaactggt 496
                ||||| |||||||||||||||||||| | |||||||||||||||||| ||||||||||||
Sbjct: 14866844 tatggacatgatacaccatactcccactcaggagattccatgtcttcatcactaactggt 14866785

                                                                            
Query: 497      tgtttacatccatagcagagtttgtgggttccttgagctaacccatgctccactgaaaca 556
                |  ||||||||||| || ||||||||||||||||| ||||| || ||||||||||| |||
Sbjct: 14866784 ttcttacatccataacaaagtttgtgggttccttgggctaatccgtgctccactgagaca 14866725

                                                                            
Query: 557      cgcttgtcaaacacgaagcattcaccctcccacaagctttcagcttccgggatttcctct 616
                || ||||||||||| |||||||||||||||||||||||||| || |  ||||||||||||
Sbjct: 14866724 cgtttgtcaaacacaaagcattcaccctcccacaagctttctgccttggggatttcctct 14866665

                                
Query: 617      aggtactttaatatcc 632
                |||||||| |||||||
Sbjct: 14866664 aggtacttcaatatcc 14866649
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>dbj|AK109472.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-E12, full
            insert sequence
          Length = 1717

 Score =  357 bits (180), Expect = 3e-95
 Identities = 282/316 (89%)
 Strand = Plus / Minus

                                                                        
Query: 317  gcttcgagcctttttggactcctgcctttatcaggaccgccaataactccccatgtctta 376
            ||||| |||||||||||||| || ||||||||||| |||||||||||||||||||||| |
Sbjct: 1368 gcttccagcctttttggacttcttcctttatcagggccgccaataactccccatgtctca 1309

                                                                        
Query: 377  aactgccggtgccgagcccttgccctttccttctcctcctcagatctcgtggaaaagcag 436
            ||||| |  ||||| |||||||||||||||||||||||||| ||| | || | |||||| 
Sbjct: 1308 aactgtctctgccgtgcccttgccctttccttctcctcctcggatttggttgcaaagcaa 1249

                                                                        
Query: 437  tatgggcatgatacaccatactcccatttaggagattccatgtcttcgtcactaactggt 496
            ||||| |||||||||||||||||||| | |||||||||||||||||| ||||||||||||
Sbjct: 1248 tatggacatgatacaccatactcccactcaggagattccatgtcttcatcactaactggt 1189

                                                                        
Query: 497  tgtttacatccatagcagagtttgtgggttccttgagctaacccatgctccactgaaaca 556
            |  ||||||||||| || ||||||||||||||||| ||||| || ||||||||||| |||
Sbjct: 1188 ttcttacatccataacaaagtttgtgggttccttgggctaatccgtgctccactgagaca 1129

                                                                        
Query: 557  cgcttgtcaaacacgaagcattcaccctcccacaagctttcagcttccgggatttcctct 616
            || ||||||||||| |||||||||||||||||||||||||| || |  ||||||||||||
Sbjct: 1128 cgtttgtcaaacacaaagcattcaccctcccacaagctttctgccttggggatttcctct 1069

                            
Query: 617  aggtactttaatatcc 632
            |||||||| |||||||
Sbjct: 1068 aggtacttcaatatcc 1053
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>gb|AY110774.1| Zea mays CL28132_1 mRNA sequence
          Length = 622

 Score =  143 bits (72), Expect = 8e-31
 Identities = 210/256 (82%)
 Strand = Plus / Plus

                                                                       
Query: 377 aactgccggtgccgagcccttgccctttccttctcctcctcagatctcgtggaaaagcag 436
           |||||||| ||||||||||| |||| ||||||||||||||| ||| |||| |  ||||| 
Sbjct: 172 aactgccgctgccgagccctagcccgttccttctcctcctcggatttcgttgcgaagcaa 231

                                                                       
Query: 437 tatgggcatgatacaccatactcccatttaggagattccatgtcttcgtcactaactggt 496
           |  ||||| || || || |||||||| | ||| ||   |||||| || || || ||||| 
Sbjct: 232 tgcgggcaagagacgccgtactcccagtgaggcgacaacatgtcctcatcgctgactggc 291

                                                                       
Query: 497 tgtttacatccatagcagagtttgtgggttccttgagctaacccatgctccactgaaaca 556
           || ||||| || ||||| ||||||||||| ||||| || || |||||| |||| || |||
Sbjct: 292 tgcttacacccgtagcaaagtttgtgggtgccttgggccaatccatgccccacagagaca 351

                                                                       
Query: 557 cgcttgtcaaacacgaagcattcaccctcccacaagctttcagcttccgggatttcctct 616
           |||||||||||||| |||||||||||||||||||| ||||| || |  ||||||||||| 
Sbjct: 352 cgcttgtcaaacacaaagcattcaccctcccacaaactttcggcctttgggatttcctcc 411

                           
Query: 617 aggtactttaatatcc 632
           || ||||| |||||||
Sbjct: 412 agatacttcaatatcc 427
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>ref|NM_129638.2| Arabidopsis thaliana unknown protein AT2G40760 mRNA, complete cds
          Length = 1492

 Score =  115 bits (58), Expect = 2e-22
 Identities = 193/238 (81%)
 Strand = Plus / Minus

                                                                        
Query: 395  cttgccctttccttctcctcctcagatctcgtggaaaagcagtatgggcatgatacacca 454
            ||||||||||| |||||||| || ||| || ||||  | ||||| ||||| || || |||
Sbjct: 1303 cttgccctttctttctcctcttctgatttcttggagtaacagtaagggcaagaaactcca 1244

                                                                        
Query: 455  tactcccatttaggagattccatgtcttcgtcactaactggttgtttacatccatagcag 514
            |||||  | |  |||| |||||||||||| ||||| |  ||||| || ||||||||||||
Sbjct: 1243 tactcgtactctggagcttccatgtcttcatcacttataggttgcttgcatccatagcag 1184

                                                                        
Query: 515  agtttgtgggttccttgagctaacccatgctccactgaaacacgcttgtcaaacacgaag 574
            ||||| || |||||||||||||  ||||| ||||| || ||||| ||||| ||||| |||
Sbjct: 1183 agtttatgtgttccttgagctagaccatgttccacagatacacgtttgtcgaacacaaag 1124

                                                                      
Query: 575  cattcaccctcccacaagctttcagcttccgggatttcctctaggtactttaatatcc 632
            ||||| || ||||| ||||| || | ||  |||| ||| || ||||||||||||||||
Sbjct: 1123 cattccccttcccataagctctcggttttagggacttcttcaaggtactttaatatcc 1066
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>gb|BT025323.1| Arabidopsis thaliana At2g40760 mRNA, complete cds
          Length = 1425

 Score =  115 bits (58), Expect = 2e-22
 Identities = 193/238 (81%)
 Strand = Plus / Minus

                                                                        
Query: 395  cttgccctttccttctcctcctcagatctcgtggaaaagcagtatgggcatgatacacca 454
            ||||||||||| |||||||| || ||| || ||||  | ||||| ||||| || || |||
Sbjct: 1301 cttgccctttctttctcctcttctgatttcttggagtaacagtaagggcaagaaactcca 1242

                                                                        
Query: 455  tactcccatttaggagattccatgtcttcgtcactaactggttgtttacatccatagcag 514
            |||||  | |  |||| |||||||||||| ||||| |  ||||| || ||||||||||||
Sbjct: 1241 tactcgtactctggagcttccatgtcttcatcacttataggttgcttgcatccatagcag 1182

                                                                        
Query: 515  agtttgtgggttccttgagctaacccatgctccactgaaacacgcttgtcaaacacgaag 574
            ||||| || |||||||||||||  ||||| ||||| || ||||| ||||| ||||| |||
Sbjct: 1181 agtttatgtgttccttgagctagaccatgttccacagatacacgtttgtcgaacacaaag 1122

                                                                      
Query: 575  cattcaccctcccacaagctttcagcttccgggatttcctctaggtactttaatatcc 632
            ||||| || ||||| ||||| || | ||  |||| ||| || ||||||||||||||||
Sbjct: 1121 cattccccttcccataagctctcggttttagggacttcttcaaggtactttaatatcc 1064
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>dbj|AK222157.1| Arabidopsis thaliana mRNA for rhodanese like protein, complete cds,
            clone: RAFL23-13-J22
          Length = 1515

 Score =  115 bits (58), Expect = 2e-22
 Identities = 193/238 (81%)
 Strand = Plus / Minus

                                                                        
Query: 395  cttgccctttccttctcctcctcagatctcgtggaaaagcagtatgggcatgatacacca 454
            ||||||||||| |||||||| || ||| || ||||  | ||||| ||||| || || |||
Sbjct: 1282 cttgccctttctttctcctcttctgatttcttggagtaacagtaagggcaagaaactcca 1223

                                                                        
Query: 455  tactcccatttaggagattccatgtcttcgtcactaactggttgtttacatccatagcag 514
            |||||  | |  |||| |||||||||||| ||||| |  ||||| || ||||||||||||
Sbjct: 1222 tactcgtactctggagcttccatgtcttcatcacttataggttgcttgcatccatagcag 1163

                                                                        
Query: 515  agtttgtgggttccttgagctaacccatgctccactgaaacacgcttgtcaaacacgaag 574
            ||||| || |||||||||||||  ||||| ||||| || ||||| ||||| ||||| |||
Sbjct: 1162 agtttatgtgttccttgagctagaccatgttccacagatacacgtttgtcgaacacaaag 1103

                                                                      
Query: 575  cattcaccctcccacaagctttcagcttccgggatttcctctaggtactttaatatcc 632
            ||||| || ||||| ||||| || | ||  |||| ||| || ||||||||||||||||
Sbjct: 1102 cattccccttcccataagctctcggttttagggacttcttcaaggtactttaatatcc 1045
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>emb|BX819256.1|CNS0A8XD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB60ZD06 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1483

 Score =  115 bits (58), Expect = 2e-22
 Identities = 193/238 (81%)
 Strand = Plus / Minus

                                                                        
Query: 395  cttgccctttccttctcctcctcagatctcgtggaaaagcagtatgggcatgatacacca 454
            ||||||||||| |||||||| || ||| || ||||  | ||||| ||||| || || |||
Sbjct: 1303 cttgccctttctttctcctcttctgatttcttggagtaacagtaagggcaagaaactcca 1244

                                                                        
Query: 455  tactcccatttaggagattccatgtcttcgtcactaactggttgtttacatccatagcag 514
            |||||  | |  |||| |||||||||||| ||||| |  ||||| || ||||||||||||
Sbjct: 1243 tactcgtactctggagcttccatgtcttcatcacttataggttgcttgcatccatagcag 1184

                                                                        
Query: 515  agtttgtgggttccttgagctaacccatgctccactgaaacacgcttgtcaaacacgaag 574
            ||||| || |||||||||||||  ||||| ||||| || ||||| ||||| ||||| |||
Sbjct: 1183 agtttatgtgttccttgagctagaccatgttccacagatacacgtttgtcgaacacaaag 1124

                                                                      
Query: 575  cattcaccctcccacaagctttcagcttccgggatttcctctaggtactttaatatcc 632
            ||||| || ||||| ||||| || | ||  |||| ||| || ||||||||||||||||
Sbjct: 1123 cattccccttcccataagctctcggttttagggacttcttcaaggtactttaatatcc 1066
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>gb|AC007660.2|AC007660 Arabidopsis thaliana chromosome II section 220 of 255 of the complete
             sequence. Sequence from clones T2P4, T7D17, T20B5
          Length = 72808

 Score =  115 bits (58), Expect = 2e-22
 Identities = 193/238 (81%)
 Strand = Plus / Minus

                                                                         
Query: 395   cttgccctttccttctcctcctcagatctcgtggaaaagcagtatgggcatgatacacca 454
             ||||||||||| |||||||| || ||| || ||||  | ||||| ||||| || || |||
Sbjct: 54247 cttgccctttctttctcctcttctgatttcttggagtaacagtaagggcaagaaactcca 54188

                                                                         
Query: 455   tactcccatttaggagattccatgtcttcgtcactaactggttgtttacatccatagcag 514
             |||||  | |  |||| |||||||||||| ||||| |  ||||| || ||||||||||||
Sbjct: 54187 tactcgtactctggagcttccatgtcttcatcacttataggttgcttgcatccatagcag 54128

                                                                         
Query: 515   agtttgtgggttccttgagctaacccatgctccactgaaacacgcttgtcaaacacgaag 574
             ||||| || |||||||||||||  ||||| ||||| || ||||| ||||| ||||| |||
Sbjct: 54127 agtttatgtgttccttgagctagaccatgttccacagatacacgtttgtcgaacacaaag 54068

                                                                       
Query: 575   cattcaccctcccacaagctttcagcttccgggatttcctctaggtactttaatatcc 632
             ||||| || ||||| ||||| || | ||  |||| ||| || ||||||||||||||||
Sbjct: 54067 cattccccttcccataagctctcggttttagggacttcttcaaggtactttaatatcc 54010
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>emb|BX819012.1|CNS0A8VW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB37ZE05 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1494

 Score =  107 bits (54), Expect = 4e-20
 Identities = 138/166 (83%)
 Strand = Plus / Minus

                                                                        
Query: 467  ggagattccatgtcttcgtcactaactggttgtttacatccatagcagagtttgtgggtt 526
            |||| |||||||||||| ||||| |  ||||| || ||||||||||||||||| || |||
Sbjct: 1225 ggagcttccatgtcttcatcacttataggttgcttgcatccatagcagagtttatgtgtt 1166

                                                                        
Query: 527  ccttgagctaacccatgctccactgaaacacgcttgtcaaacacgaagcattcaccctcc 586
            ||||||||||  ||||| ||||| || ||||| ||||| ||||| |||||||| || |||
Sbjct: 1165 ccttgagctagaccatgttccacagatacacgtttgtcgaacacaaagcattccccttcc 1106

                                                          
Query: 587  cacaagctttcagcttccgggatttcctctaggtactttaatatcc 632
            || ||||| || | ||  |||| ||| || ||||||||||||||||
Sbjct: 1105 cataagctctcggttttagggacttcttcaaggtactttaatatcc 1060
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>emb|BX820029.1|CNS0A8FQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS65ZB10 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1439

 Score =  107 bits (54), Expect = 4e-20
 Identities = 192/238 (80%)
 Strand = Plus / Minus

                                                                        
Query: 395  cttgccctttccttctcctcctcagatctcgtggaaaagcagtatgggcatgatacacca 454
            ||||||||||| |||||||| || ||| || ||||  | ||||| ||||| || || |||
Sbjct: 1263 cttgccctttctttctcctcttctgatttcttggagtaacagtaagggcaagagactcca 1204

                                                                        
Query: 455  tactcccatttaggagattccatgtcttcgtcactaactggttgtttacatccatagcag 514
            |||||  | |  |||| |||||||||||| ||||| |  ||||| || |||| |||||||
Sbjct: 1203 tactcgtactctggagcttccatgtcttcatcacttataggttgcttgcatcgatagcag 1144

                                                                        
Query: 515  agtttgtgggttccttgagctaacccatgctccactgaaacacgcttgtcaaacacgaag 574
            ||||| || |||||||||||||  ||||| ||||| || ||||| ||||| ||||| |||
Sbjct: 1143 agtttatgtgttccttgagctagaccatgttccacagatacacgtttgtcgaacacaaag 1084

                                                                      
Query: 575  cattcaccctcccacaagctttcagcttccgggatttcctctaggtactttaatatcc 632
            ||||| || ||||| ||||| || | ||  |||| ||| || ||||||||||||||||
Sbjct: 1083 cattccccttcccataagctctcggttttagggacttcttcaaggtactttaatatcc 1026
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>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                               
Query: 542    tgctccactgaaacacgcttgtcaaacacgaagcattcaccctcccaca 590
              |||| |||||||||||||| ||||||||||||||| || || |||||||
Sbjct: 969561 tgcttcactgaaacacgctggtcaaacacgaagcactcgccttcccaca 969609
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>gb|AC154761.2| Mus musculus BAC clone RP24-416E4 from chromosome 17, complete sequence
          Length = 169027

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 218   gagggcatttcaataatccag 238
             |||||||||||||||||||||
Sbjct: 85476 gagggcatttcaataatccag 85456
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>emb|AL603839.9| Human DNA sequence from clone RP11-656D10 on chromosome 1 Contains the
             gene for a novel zinc finger protein, the gene for a novel
             protein and three novel genes, complete sequence
          Length = 64478

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 175   agccagacaaaaacactacag 195
             |||||||||||||||||||||
Sbjct: 59392 agccagacaaaaacactacag 59412
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>emb|AL590386.5| Human DNA sequence from clone RP11-721G21 on chromosome 9, complete
             sequence
          Length = 90510

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 175   agccagacaaaaacactacag 195
             |||||||||||||||||||||
Sbjct: 61426 agccagacaaaaacactacag 61446
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>gb|AC159968.3| Mus musculus chromosome 3, clone RP23-256J12, complete sequence
          Length = 153684

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 258    ttgccagtttaagttatactg 278
              |||||||||||||||||||||
Sbjct: 111690 ttgccagtttaagttatactg 111670
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>gb|AC010538.9| Homo sapiens chromosome 16 clone RP11-368I7, complete sequence
          Length = 210031

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 383    cggtgccgagcccttgccctttcct 407
              |||||||| ||||||||||||||||
Sbjct: 110793 cggtgccgggcccttgccctttcct 110769
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>emb|AJ007973.1|HSA007973 Homo sapiens LGMD2B gene
          Length = 36133

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 393   cccttgccctttccttctcct 413
             |||||||||||||||||||||
Sbjct: 12876 cccttgccctttccttctcct 12856
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>gb|AC009136.6| Homo sapiens chromosome 16 clone RP11-518J6, complete sequence
          Length = 182105

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 543   gctccactgaaacacgcttgtcaaa 567
             ||||||||||||||| |||||||||
Sbjct: 68705 gctccactgaaacactcttgtcaaa 68681
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>gb|AC106736.4| Homo sapiens chromosome 16 clone CTD-2520I13, complete sequence
          Length = 152212

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 543    gctccactgaaacacgcttgtcaaa 567
              ||||||||||||||| |||||||||
Sbjct: 100747 gctccactgaaacactcttgtcaaa 100723
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>gb|AC010147.11| Homo sapiens BAC clone RP11-356H17 from 2, complete sequence
          Length = 219086

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 393   cccttgccctttccttctcct 413
             |||||||||||||||||||||
Sbjct: 95807 cccttgccctttccttctcct 95787
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>gb|AC131330.25| Mus musculus chromosome 14, clone RP23-477H13, complete sequence
          Length = 166214

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 240  agtaataacaaaatacaatt 259
            ||||||||||||||||||||
Sbjct: 3292 agtaataacaaaatacaatt 3311
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>emb|Z81130.1|CET23G11 Caenorhabditis elegans Cosmid T23G11, complete sequence
          Length = 24762

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 415   ctcagatctcgtggaaaagc 434
             ||||||||||||||||||||
Sbjct: 24058 ctcagatctcgtggaaaagc 24039
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>ref|XM_541152.2| PREDICTED: Canis familiaris similar to Pleckstrin homology domain
            containing family G member 1 (LOC484035), mRNA
          Length = 4779

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 404  tccttctcctcctcagatct 423
            ||||||||||||||||||||
Sbjct: 2290 tccttctcctcctcagatct 2309
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>emb|AL732325.6| Human DNA sequence from clone RP11-692N21 on chromosome X Contains part
             of the SH3KBP1 gene for SH3-domain kinase binding protein
             1 (CIN85), complete sequence
          Length = 96764

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 394   ccttgccctttccttctcctcctc 417
             |||||||||||||| |||||||||
Sbjct: 20884 ccttgccctttcctcctcctcctc 20907
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>emb|AL354695.12| Human DNA sequence from clone RP11-265G8 on chromosome 10 Contains a
             high-mobility group nucleosome binding domain 1 (HMGN1)
             pseudogene, a pseudogene similar to part of ATPase, Ca++
             transporting cardiac muscle slow twitch 2 (ATP2A2) and the
             gene for a novel protein, complete sequence
          Length = 125859

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   agccagacaaaaacactaca 194
             ||||||||||||||||||||
Sbjct: 26497 agccagacaaaaacactaca 26478
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>emb|CR847517.1| Human DNA sequence from clone XX-NCIH2171_9D08, complete sequence
          Length = 112973

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 428   gaaaagcagtatgggcatga 447
             ||||||||||||||||||||
Sbjct: 76869 gaaaagcagtatgggcatga 76888
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>gb|AC108925.8| Homo sapiens chromosome 8, clone RP11-1136L8, complete sequence
          Length = 159104

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 428   gaaaagcagtatgggcatga 447
             ||||||||||||||||||||
Sbjct: 94683 gaaaagcagtatgggcatga 94664
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>gb|AC112506.5| Homo sapiens 3 BAC RP11-286P15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 115279

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   agccagacaaaaacactaca 194
             ||||||||||||||||||||
Sbjct: 34977 agccagacaaaaacactaca 34958
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>gb|AC096564.3| Homo sapiens BAC clone RP11-286E11 from 4, complete sequence
          Length = 163317

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 175    agccagacaaaaacactaca 194
              ||||||||||||||||||||
Sbjct: 133114 agccagacaaaaacactaca 133133
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>gb|AC157511.2| Mus musculus BAC clone RP24-456J10 from chromosome 9, complete sequence
          Length = 167921

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 333    gactcctgcctttatcagga 352
              ||||||||||||||||||||
Sbjct: 162824 gactcctgcctttatcagga 162805
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>dbj|AK078291.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
            enriched library, clone:6430575L20
            product:unclassifiable, full insert sequence
          Length = 2265

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 238  gaagtaataacaaaatacaa 257
            ||||||||||||||||||||
Sbjct: 2265 gaagtaataacaaaatacaa 2246
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>gb|AC159549.11| Mus musculus 6 BAC RP23-304D1 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 236543

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 394   ccttgccctttccttctcctcctc 417
             ||||||||||||||||||| ||||
Sbjct: 27853 ccttgccctttccttctccccctc 27830
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>ref|NM_059744.1| Caenorhabditis elegans T23G11.1 (T23G11.1) mRNA, complete cds
          Length = 507

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 415 ctcagatctcgtggaaaagc 434
           ||||||||||||||||||||
Sbjct: 103 ctcagatctcgtggaaaagc 122
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>gb|AC079227.12| Homo sapiens BAC clone RP11-80B23 from 4, complete sequence
          Length = 181942

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   agccagacaaaaacactaca 194
             ||||||||||||||||||||
Sbjct: 14923 agccagacaaaaacactaca 14904
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>gb|AC137625.2| Homo sapiens 3 BAC RP11-1114A3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 103065

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 392   gcccttgccctttccttctc 411
             ||||||||||||||||||||
Sbjct: 43194 gcccttgccctttccttctc 43175
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>gb|AC154186.1| Mus musculus BAC clone RP24-435B3 from chromosome 14, complete sequence
          Length = 167900

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 240   agtaataacaaaatacaatt 259
             ||||||||||||||||||||
Sbjct: 79794 agtaataacaaaatacaatt 79775
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>gb|AC155947.8| Mus musculus 6 BAC RP24-417N21 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 156871

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 394    ccttgccctttccttctcctcctc 417
              ||||||||||||||||||| ||||
Sbjct: 102944 ccttgccctttccttctccccctc 102921
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>gb|AC004893.1|AC004893 Homo sapiens PAC clone RP4-808A1 from 7q21.1-q31.1, complete sequence
          Length = 103738

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   agccagacaaaaacactaca 194
             ||||||||||||||||||||
Sbjct: 66553 agccagacaaaaacactaca 66572
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>dbj|AP008952.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT45D07, TM0932b,
             complete sequence
          Length = 74001

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 399   ccctttccttctcctcctca 418
             ||||||||||||||||||||
Sbjct: 50086 ccctttccttctcctcctca 50067
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>dbj|AP008949.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT44M23, TM1572a,
            complete sequence
          Length = 48924

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 399  ccctttccttctcctcctca 418
            ||||||||||||||||||||
Sbjct: 3957 ccctttccttctcctcctca 3938


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,043,796
Number of Sequences: 3902068
Number of extensions: 5043796
Number of successful extensions: 108379
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108250
Number of HSP's gapped (non-prelim): 123
length of query: 632
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 609
effective length of database: 17,143,297,704
effective search space: 10440268301736
effective search space used: 10440268301736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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