>TM9S3_HUMAN (Q9HD45) Transmembrane 9 superfamily protein member 3 precursor|
           (SM-11044-binding protein) (EP70-P-iso)
          Length = 589

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 33/69 (47%), Positives = 40/69 (57%)
 Frame = -2

Query: 640 SAASTALXXXXXXXXXYHVKTKMSGFFQTSFYFGYTLMFXXXXXXXXXXXGYVGSTLFVR 461
           SAASTA+         Y  KTKM G FQTSFYFGY  +F           GY+G++ FVR
Sbjct: 521 SAASTAIYVYMYSFYYYFFKTKMYGLFQTSFYFGYMAVFSTALGIMCGAIGYMGTSAFVR 580

Query: 460 RIYRNIKCD 434
           +IY N+K D
Sbjct: 581 KIYTNVKID 589

>TM9S3_MOUSE (Q9ET30) Transmembrane 9 superfamily protein member 3 precursor|
          Length = 587

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 33/69 (47%), Positives = 40/69 (57%)
 Frame = -2

Query: 640 SAASTALXXXXXXXXXYHVKTKMSGFFQTSFYFGYTLMFXXXXXXXXXXXGYVGSTLFVR 461
           SAASTA+         Y  KTKM G FQTSFYFGY  +F           GY+G++ FVR
Sbjct: 519 SAASTAIYVYMYSFYYYFFKTKMYGLFQTSFYFGYMAVFSTALGIMCGAIGYMGTSAFVR 578

Query: 460 RIYRNIKCD 434
           +IY N+K D
Sbjct: 579 KIYTNVKID 587

>TM9S1_RAT (Q66HF2) Transmembrane 9 superfamily protein member 1 precursor|
          Length = 589

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 22/69 (31%), Positives = 30/69 (43%)
 Frame = -2

Query: 640 SAASTALXXXXXXXXXYHVKTKMSGFFQTSFYFGYTLMFXXXXXXXXXXXGYVGSTLFVR 461
           S  ST L         Y  ++ MSG  QT  +FGY+L+             +  S  F+R
Sbjct: 521 SVGSTGLFIFLYSVFYYARRSNMSGAVQTVEFFGYSLLTGYVFFLMLGTISFFSSLKFIR 580

Query: 460 RIYRNIKCD 434
            IY N+K D
Sbjct: 581 YIYVNLKMD 589

>TM9S1_PONPY (Q5R8F1) Transmembrane 9 superfamily protein member 1 precursor|
          Length = 606

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 22/69 (31%), Positives = 30/69 (43%)
 Frame = -2

Query: 640 SAASTALXXXXXXXXXYHVKTKMSGFFQTSFYFGYTLMFXXXXXXXXXXXGYVGSTLFVR 461
           S  ST L         Y  ++ MSG  QT  +FGY+L+             +  S  F+R
Sbjct: 538 SVGSTGLFIFLYSVFYYARRSNMSGAVQTVEFFGYSLLTGYVFFLMLGTISFFSSLKFIR 597

Query: 460 RIYRNIKCD 434
            IY N+K D
Sbjct: 598 YIYVNLKMD 606

>TM9S1_MOUSE (Q9DBU0) Transmembrane 9 superfamily protein member 1 precursor|
          Length = 606

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 22/69 (31%), Positives = 30/69 (43%)
 Frame = -2

Query: 640 SAASTALXXXXXXXXXYHVKTKMSGFFQTSFYFGYTLMFXXXXXXXXXXXGYVGSTLFVR 461
           S  ST L         Y  ++ MSG  QT  +FGY+L+             +  S  F+R
Sbjct: 538 SVGSTGLFIFLYSVFYYARRSNMSGAVQTVEFFGYSLLTGYVFFLMLGTISFFSSLKFIR 597

Query: 460 RIYRNIKCD 434
            IY N+K D
Sbjct: 598 YIYVNLKMD 606

>TM9S1_HUMAN (O15321) Transmembrane 9 superfamily protein member 1 precursor|
           (hMP70)
          Length = 606

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 22/69 (31%), Positives = 30/69 (43%)
 Frame = -2

Query: 640 SAASTALXXXXXXXXXYHVKTKMSGFFQTSFYFGYTLMFXXXXXXXXXXXGYVGSTLFVR 461
           S  ST L         Y  ++ MSG  QT  +FGY+L+             +  S  F+R
Sbjct: 538 SVGSTGLFIFLYSVFYYARRSNMSGAVQTVEFFGYSLLTGYVFFLMLGTISFFSSLKFIR 597

Query: 460 RIYRNIKCD 434
            IY N+K D
Sbjct: 598 YIYVNLKMD 606

>EMP70_YEAST (P32802) Endosomal P24A protein precursor (70 kDa endomembrane|
           protein) (Pheromone alpha-factor transporter) (Acidic 24
           kDa late endocytic intermediate component)
          Length = 667

 Score = 35.0 bits (79), Expect = 0.19
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = -2

Query: 583 KTKMSGFFQTSFYFGYTLMFXXXXXXXXXXXGYVGSTLFVRRIYRNIKCD 434
           K K+ GF     Y GY+ +            G++ S LFVR+IY +IK D
Sbjct: 618 KFKLGGFTTIVLYVGYSSVISLLCCLVTGSIGFISSMLFVRKIYSSIKVD 667

>UNC7_CAEEL (Q03412) Innexin unc-7 (Uncoordinated protein 7)|
          Length = 522

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 22/59 (37%), Positives = 29/59 (49%)
 Frame = +2

Query: 401 PPPPHICSRKLITFDVSVDSPHKKS*PYIANSTAKYAQTKTEHQCVAKVETCLEKAGHL 577
           PPPP   +  L+    +VDSP KK      ++  KY +T    +   K  T LEKA HL
Sbjct: 22  PPPPRAPTTALVLRVPTVDSPSKKK--QQPDTRNKYQETALRDK---KTRTPLEKARHL 75

>CD59_RAT (P27274) CD59 glycoprotein precursor (Membrane attack complex|
           inhibition factor) (MACIF) (MAC-inhibitory protein)
           (MAC-IP) (Protectin)
          Length = 126

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
 Frame = -1

Query: 551 FLLWLHIDVLSWSGHTLRCY------WLCRVNSFCEENLQKHQM*LISCYICGVGAEQYQ 390
           F+L L + VL  +G +LRCY        C+ NS C  NL        +C +   G + YQ
Sbjct: 7   FILLLLLAVLCSTGVSLRCYNCLDPVSSCKTNSTCSPNLD-------ACLVAVSGKQVYQ 59

Query: 389 K 387
           +
Sbjct: 60  Q 60

>TM9S4_HUMAN (Q92544) Transmembrane 9 superfamily protein member 4|
          Length = 625

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -2

Query: 565 FFQTSFYFGYTLMFXXXXXXXXXXXGYVGSTLFVRRIYRNIKCD 434
           F  +  YFGYT +            G+  + +FVR+IY  +K D
Sbjct: 582 FIPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKID 625


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,969,498
Number of Sequences: 219361
Number of extensions: 1621778
Number of successful extensions: 4037
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4036
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 5972710590
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)