Clone Name	rbags16c09
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AY677176.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (...	1053	0.0
2	dbj|AB079063.2| Oryza sativa (japonica cultivar-group) UXS-4 mRN...	381	e-102
3	dbj|AK104675.1| Oryza sativa (japonica cultivar-group) cDNA clon...	381	e-102
4	dbj|AK069181.1| Oryza sativa (japonica cultivar-group) cDNA clon...	381	e-102
5	ref|NM_190499.1| Oryza sativa (japonica cultivar-group), predic...	373	e-100
6	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	212	1e-51
7	dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic D...	212	1e-51
8	gb|AY619953.1| Nicotiana tabacum putative UDP-glucuronate decarb...	92	3e-15
9	gb|AY105825.1| Zea mays PCO074580 mRNA sequence	90	1e-14
10	gb|AY922313.1| Populus tomentosa UDP-glucuronic acid decarboxyla...	66	1e-07
11	gb|AY677178.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (...	48	0.034
12	ref|NM_115212.2| Arabidopsis thaliana UXS1 (UDP-GLUCURONIC ACID ...	46	0.13
13	ref|NM_180363.1| Arabidopsis thaliana UXS1 (UDP-GLUCURONIC ACID ...	46	0.13
14	gb|AY065075.1| Arabidopsis thaliana dTDP-glucose 4-6-dehydratase...	46	0.13
15	emb|BX823214.1|CNS0A7KG Arabidopsis thaliana Full-length cDNA Co...	46	0.13
16	emb|BX823176.1|CNS0A7M4 Arabidopsis thaliana Full-length cDNA Co...	46	0.13
17	emb|BX822635.1|CNS0A7MG Arabidopsis thaliana Full-length cDNA Co...	46	0.13
18	gb|BT003355.1| Arabidopsis thaliana dTDP-glucose 4-6-dehydratase...	46	0.13
19	gb|AF387787.1| Arabidopsis thaliana UDP-glucuronic acid decarbox...	46	0.13
20	emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome 3, BA...	46	0.13
21	gb|AY922314.1| Populus tomentosa UDP-glucuronic acid decarboxyla...	44	0.53
22	emb|CR683678.1|CNS0FQH6 Tetraodon nigroviridis full-length cDNA	42	2.1
23	emb|BX664618.12| Zebrafish DNA sequence from clone DKEYP-82A1 in...	42	2.1
24	emb|CR388058.6| Zebrafish DNA sequence from clone DKEY-184L17 in...	42	2.1
25	ref|NM_103267.1| Arabidopsis thaliana cysteine-type peptidase AT...	40	8.2
26	gb|AC146455.3| Pan troglodytes BAC clone CH251-460B7 from Y, com...	40	8.2
27	gb|AC126670.4| Mus musculus BAC clone RP24-469G14 from chromosom...	40	8.2
28	emb|AJ297276.1|PNI297276 Populus nigra microsatellite DNA, clone...	40	8.2
29	emb|CR318599.18| Zebrafish DNA sequence from clone DKEY-28D5 in ...	40	8.2
30	emb|CR293522.9| Zebrafish DNA sequence from clone DKEY-29I3 in l...	40	8.2
31	emb|AL353725.14| Human DNA sequence from clone RP11-218C11 on ch...	40	8.2
32	emb|AL139331.19| Human DNA sequence from clone RP11-328M4 on chr...	40	8.2
33	emb|AL157776.15| Human DNA sequence from clone RP11-68J15 on chr...	40	8.2
34	emb|AL049824.4|HSJ117L23 Human DNA sequence from clone RP1-117L2...	40	8.2
35	gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence	40	8.2
36	gb|AC147659.5| Pan troglodytes BAC clone CH251-425E12 from chrom...	40	8.2
37	gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete g...	40	8.2
38	gb|AC018866.9| Homo sapiens BAC clone RP11-57J18 from 2, complet...	40	8.2
39	emb|BX322625.9| Mouse DNA sequence from clone RP24-158I12 on chr...	40	8.2
40	gb|AC007887.9|AC007887 Genomic sequence for Arabidopsis thaliana...	40	8.2
41	gb|AC007126.6|AC007126 Homo sapiens chromosome 4 clone C0496D08,...	40	8.2
42	emb|AL845467.3| Mouse DNA sequence from clone RP23-435G20 on chr...	40	8.2

---

>gb|AY677176.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (UXS4) mRNA, complete
            cds
          Length = 1455

 Score = 1053 bits (531), Expect = 0.0
 Identities = 531/531 (100%)
 Strand = Plus / Minus

                                                                        
Query: 76   gccccttcacctatccttcactcaacttctatagtttcacatgtggacaaaaaacagttt 135
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1455 gccccttcacctatccttcactcaacttctatagtttcacatgtggacaaaaaacagttt 1396

                                                                        
Query: 136  gctacttctgtccaatctcaccaagacggaaacaaatttaaatgattctacaaggacgtt 195
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1395 gctacttctgtccaatctcaccaagacggaaacaaatttaaatgattctacaaggacgtt 1336

                                                                        
Query: 196  atacaaacacagaattgtactgaatggatccagttggtgaagcacgtttcctatattcgc 255
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1335 atacaaacacagaattgtactgaatggatccagttggtgaagcacgtttcctatattcgc 1276

                                                                        
Query: 256  ggcattcagaaccaaatagatttatctcactgttgccttgattactcatccaagatcctt 315
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1275 ggcattcagaaccaaatagatttatctcactgttgccttgattactcatccaagatcctt 1216

                                                                        
Query: 316  ttgcggaaatctgtcaccatcaagggaaggccttccttaagagatacctttggctcccaa 375
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1215 ttgcggaaatctgtcaccatcaagggaaggccttccttaagagatacctttggctcccaa 1156

                                                                        
Query: 376  cctagcatttgcttcgccttggtaatatcgggctttctcatatggggatcatcagctgtg 435
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1155 cctagcatttgcttcgccttggtaatatcgggctttctcatatggggatcatcagctgtg 1096

                                                                        
Query: 436  ttgggcttgaattcaattgttgacattgggtcgattgtttccttcacaacctctgcaagt 495
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1095 ttgggcttgaattcaattgttgacattgggtcgattgtttccttcacaacctctgcaagt 1036

                                                                        
Query: 496  tccaacatggtgaactctccagggtttcctagattgaaagggccaatatgatcactctcc 555
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1035 tccaacatggtgaactctccagggtttcctagattgaaagggccaatatgatcactctcc 976

                                                               
Query: 556  atcagagccatcaatccagcaaccagatcagaaacatactgaaaacttcga 606
            |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975  atcagagccatcaatccagcaaccagatcagaaacatactgaaaacttcga 925

---

>dbj|AB079063.2| Oryza sativa (japonica cultivar-group) UXS-4 mRNA for UDP-glucuronic
            acid decarboxylase, complete cds
          Length = 1404

 Score =  381 bits (192), Expect = e-102
 Identities = 282/312 (90%)
 Strand = Plus / Minus

                                                                        
Query: 293  ttgattactcatccaagatccttttgcggaaatctgtcaccatcaagggaaggccttcct 352
            |||||||||||||||| || ||||  ||||| ||  ||||||| |||||||| |||||| 
Sbjct: 1237 ttgattactcatccaaaattctttgacggaagtccttcaccattaagggaagaccttccc 1178

                                                                        
Query: 353  taagagatacctttggctcccaacctagcatttgcttcgccttggtaatatcgggctttc 412
            | ||||| |||||||||||||||| |||||  ||||| |||||||||||||| |||||||
Sbjct: 1177 tgagagagacctttggctcccaacgtagcaggtgcttggccttggtaatatctggctttc 1118

                                                                        
Query: 413  tcatatggggatcatcagctgtgttgggcttgaattcaattgttgacattgggtcgattg 472
            |||| || |||||||||||||||||||| |||||||||||||||| ||||||||| ||||
Sbjct: 1117 tcatgtgaggatcatcagctgtgttgggtttgaattcaattgttgccattgggtcaattg 1058

                                                                        
Query: 473  tttccttcacaacctctgcaagttccaacatggtgaactctccagggtttcctagattga 532
            ||||||||||||||| ||||||||||||||||||||| ||||| |||||||| || ||||
Sbjct: 1057 tttccttcacaacctgtgcaagttccaacatggtgaattctcctgggtttcccaggttga 998

                                                                        
Query: 533  aagggccaatatgatcactctccatcagagccatcaatccagcaaccagatcagaaacat 592
            |||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 997  aagggccaatgtgatcaccctccatcagagccatcagtccagcaaccagatcagaaacat 938

                        
Query: 593  actgaaaacttc 604
            ||||||||||||
Sbjct: 937  actgaaaacttc 926

---

>dbj|AK104675.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-H12, full
           insert sequence
          Length = 805

 Score =  381 bits (192), Expect = e-102
 Identities = 282/312 (90%)
 Strand = Plus / Minus

                                                                       
Query: 293 ttgattactcatccaagatccttttgcggaaatctgtcaccatcaagggaaggccttcct 352
           |||||||||||||||| || ||||  ||||| ||  ||||||| |||||||| |||||| 
Sbjct: 478 ttgattactcatccaaaattctttgacggaagtccttcaccattaagggaagaccttccc 419

                                                                       
Query: 353 taagagatacctttggctcccaacctagcatttgcttcgccttggtaatatcgggctttc 412
           | ||||| |||||||||||||||| |||||  ||||| |||||||||||||| |||||||
Sbjct: 418 tgagagagacctttggctcccaacgtagcaggtgcttggccttggtaatatctggctttc 359

                                                                       
Query: 413 tcatatggggatcatcagctgtgttgggcttgaattcaattgttgacattgggtcgattg 472
           |||| || |||||||||||||||||||| |||||||||||||||| ||||||||| ||||
Sbjct: 358 tcatgtgaggatcatcagctgtgttgggtttgaattcaattgttgccattgggtcaattg 299

                                                                       
Query: 473 tttccttcacaacctctgcaagttccaacatggtgaactctccagggtttcctagattga 532
           ||||||||||||||| ||||||||||||||||||||| ||||| |||||||| || ||||
Sbjct: 298 tttccttcacaacctgtgcaagttccaacatggtgaattctcctgggtttcccaggttga 239

                                                                       
Query: 533 aagggccaatatgatcactctccatcagagccatcaatccagcaaccagatcagaaacat 592
           |||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 238 aagggccaatgtgatcaccctccatcagagccatcagtccagcaaccagatcagaaacat 179

                       
Query: 593 actgaaaacttc 604
           ||||||||||||
Sbjct: 178 actgaaaacttc 167

---

>dbj|AK069181.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008F13, full
            insert sequence
          Length = 2387

 Score =  381 bits (192), Expect = e-102
 Identities = 282/312 (90%)
 Strand = Plus / Minus

                                                                        
Query: 293  ttgattactcatccaagatccttttgcggaaatctgtcaccatcaagggaaggccttcct 352
            |||||||||||||||| || ||||  ||||| ||  ||||||| |||||||| |||||| 
Sbjct: 2055 ttgattactcatccaaaattctttgacggaagtccttcaccattaagggaagaccttccc 1996

                                                                        
Query: 353  taagagatacctttggctcccaacctagcatttgcttcgccttggtaatatcgggctttc 412
            | ||||| |||||||||||||||| |||||  ||||| |||||||||||||| |||||||
Sbjct: 1995 tgagagagacctttggctcccaacgtagcaggtgcttggccttggtaatatctggctttc 1936

                                                                        
Query: 413  tcatatggggatcatcagctgtgttgggcttgaattcaattgttgacattgggtcgattg 472
            |||| || |||||||||||||||||||| |||||||||||||||| ||||||||| ||||
Sbjct: 1935 tcatgtgaggatcatcagctgtgttgggtttgaattcaattgttgccattgggtcaattg 1876

                                                                        
Query: 473  tttccttcacaacctctgcaagttccaacatggtgaactctccagggtttcctagattga 532
            ||||||||||||||| ||||||||||||||||||||| ||||| |||||||| || ||||
Sbjct: 1875 tttccttcacaacctgtgcaagttccaacatggtgaattctcctgggtttcccaggttga 1816

                                                                        
Query: 533  aagggccaatatgatcactctccatcagagccatcaatccagcaaccagatcagaaacat 592
            |||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1815 aagggccaatgtgatcaccctccatcagagccatcagtccagcaaccagatcagaaacat 1756

                        
Query: 593  actgaaaacttc 604
            ||||||||||||
Sbjct: 1755 actgaaaacttc 1744

---

>ref|NM_190499.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1173

 Score =  373 bits (188), Expect = e-100
 Identities = 278/308 (90%)
 Strand = Plus / Minus

                                                                        
Query: 297  ttactcatccaagatccttttgcggaaatctgtcaccatcaagggaaggccttccttaag 356
            |||||||||||| || ||||  ||||| ||  ||||||| |||||||| |||||| | ||
Sbjct: 1173 ttactcatccaaaattctttgacggaagtccttcaccattaagggaagaccttccctgag 1114

                                                                        
Query: 357  agatacctttggctcccaacctagcatttgcttcgccttggtaatatcgggctttctcat 416
            ||| |||||||||||||||| |||||  ||||| |||||||||||||| |||||||||||
Sbjct: 1113 agagacctttggctcccaacgtagcaggtgcttggccttggtaatatctggctttctcat 1054

                                                                        
Query: 417  atggggatcatcagctgtgttgggcttgaattcaattgttgacattgggtcgattgtttc 476
             || |||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||
Sbjct: 1053 gtgaggatcatcagctgtgttgggtttgaattcaattgttgccattgggtcaattgtttc 994

                                                                        
Query: 477  cttcacaacctctgcaagttccaacatggtgaactctccagggtttcctagattgaaagg 536
            ||||||||||| ||||||||||||||||||||| ||||| |||||||| || ||||||||
Sbjct: 993  cttcacaacctgtgcaagttccaacatggtgaattctcctgggtttcccaggttgaaagg 934

                                                                        
Query: 537  gccaatatgatcactctccatcagagccatcaatccagcaaccagatcagaaacatactg 596
            |||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 933  gccaatgtgatcaccctccatcagagccatcagtccagcaaccagatcagaaacatactg 874

                    
Query: 597  aaaacttc 604
            ||||||||
Sbjct: 873  aaaacttc 866

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  212 bits (107), Expect = 1e-51
 Identities = 173/195 (88%)
 Strand = Plus / Minus

                                                                            
Query: 293      ttgattactcatccaagatccttttgcggaaatctgtcaccatcaagggaaggccttcct 352
                |||||||||||||||| || ||||  ||||| ||  ||||||| |||||||| |||||| 
Sbjct: 35893507 ttgattactcatccaaaattctttgacggaagtccttcaccattaagggaagaccttccc 35893448

                                                                            
Query: 353      taagagatacctttggctcccaacctagcatttgcttcgccttggtaatatcgggctttc 412
                | ||||| |||||||||||||||| |||||  ||||| |||||||||||||| |||||||
Sbjct: 35893447 tgagagagacctttggctcccaacgtagcaggtgcttggccttggtaatatctggctttc 35893388

                                                                            
Query: 413      tcatatggggatcatcagctgtgttgggcttgaattcaattgttgacattgggtcgattg 472
                |||| || |||||||||||||||||||| |||||||||||||||| ||||||||| ||||
Sbjct: 35893387 tcatgtgaggatcatcagctgtgttgggtttgaattcaattgttgccattgggtcaattg 35893328

                               
Query: 473      tttccttcacaacct 487
                |||||||||||||||
Sbjct: 35893327 tttccttcacaacct 35893313



 Score =  129 bits (65), Expect = 1e-26
 Identities = 89/97 (91%)
 Strand = Plus / Minus

                                                                            
Query: 483      aacctctgcaagttccaacatggtgaactctccagggtttcctagattgaaagggccaat 542
                ||||| ||||||||||||||||||||| ||||| |||||||| || ||||||||||||||
Sbjct: 35893245 aacctgtgcaagttccaacatggtgaattctcctgggtttcccaggttgaaagggccaat 35893186

                                                     
Query: 543      atgatcactctccatcagagccatcaatccagcaacc 579
                 ||||||| ||||||||||||||||| ||||||||||
Sbjct: 35893185 gtgatcaccctccatcagagccatcagtccagcaacc 35893149



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                            
Query: 577      accagatcagaaacatactgaaaacttc 604
                ||||||||||||||||||||||||||||
Sbjct: 35892720 accagatcagaaacatactgaaaacttc 35892693

---

>dbj|AP003271.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0506B12
          Length = 170759

 Score =  212 bits (107), Expect = 1e-51
 Identities = 173/195 (88%)
 Strand = Plus / Minus

                                                                          
Query: 293    ttgattactcatccaagatccttttgcggaaatctgtcaccatcaagggaaggccttcct 352
              |||||||||||||||| || ||||  ||||| ||  ||||||| |||||||| |||||| 
Sbjct: 157965 ttgattactcatccaaaattctttgacggaagtccttcaccattaagggaagaccttccc 157906

                                                                          
Query: 353    taagagatacctttggctcccaacctagcatttgcttcgccttggtaatatcgggctttc 412
              | ||||| |||||||||||||||| |||||  ||||| |||||||||||||| |||||||
Sbjct: 157905 tgagagagacctttggctcccaacgtagcaggtgcttggccttggtaatatctggctttc 157846

                                                                          
Query: 413    tcatatggggatcatcagctgtgttgggcttgaattcaattgttgacattgggtcgattg 472
              |||| || |||||||||||||||||||| |||||||||||||||| ||||||||| ||||
Sbjct: 157845 tcatgtgaggatcatcagctgtgttgggtttgaattcaattgttgccattgggtcaattg 157786

                             
Query: 473    tttccttcacaacct 487
              |||||||||||||||
Sbjct: 157785 tttccttcacaacct 157771



 Score =  129 bits (65), Expect = 1e-26
 Identities = 89/97 (91%)
 Strand = Plus / Minus

                                                                          
Query: 483    aacctctgcaagttccaacatggtgaactctccagggtttcctagattgaaagggccaat 542
              ||||| ||||||||||||||||||||| ||||| |||||||| || ||||||||||||||
Sbjct: 157703 aacctgtgcaagttccaacatggtgaattctcctgggtttcccaggttgaaagggccaat 157644

                                                   
Query: 543    atgatcactctccatcagagccatcaatccagcaacc 579
               ||||||| ||||||||||||||||| ||||||||||
Sbjct: 157643 gtgatcaccctccatcagagccatcagtccagcaacc 157607



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                          
Query: 577    accagatcagaaacatactgaaaacttc 604
              ||||||||||||||||||||||||||||
Sbjct: 157178 accagatcagaaacatactgaaaacttc 157151

---

>gb|AY619953.1| Nicotiana tabacum putative UDP-glucuronate decarboxylase 4 mRNA,
            partial cds
          Length = 1470

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 103/122 (84%)
 Strand = Plus / Minus

                                                                        
Query: 484  acctctgcaagttccaacatggtgaactctccagggtttcctagattgaaagggccaata 543
            ||||| ||||| || ||||||||||||||||| |||||||| |  |||||||||||||| 
Sbjct: 1026 acctcggcaagctctaacatggtgaactctcctgggtttcccaagttgaaagggccaatg 967

                                                                        
Query: 544  tgatcactctccatcagagccatcaatccagcaaccagatcagaaacatactgaaaactt 603
            || |||| |||||| |  ||||| |||||| | |||| |||||| ||||||||||| |||
Sbjct: 966  tgttcaccctccattaaggccattaatccatcgaccaaatcagatacatactgaaagctt 907

              
Query: 604  cg 605
            ||
Sbjct: 906  cg 905

---

>gb|AY105825.1| Zea mays PCO074580 mRNA sequence
          Length = 583

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 99/117 (84%)
 Strand = Plus / Minus

                                                                       
Query: 288 ttgccttgattactcatccaagatccttttgcggaaatctgtcaccatcaagggaaggcc 347
           |||| |||||||||||||| |||||||||  |||||||||   ||||| |  ||||||||
Sbjct: 123 ttgctttgattactcatccgagatcctttgacggaaatcttgaaccattagcggaaggcc 64

                                                                    
Query: 348 ttccttaagagatacctttggctcccaacctagcatttgcttcgccttggtaatatc 404
           ||| || ||||| |||||||||||||||  ||||| |||||| |||||||| |||||
Sbjct: 63  ttctttgagagagacctttggctcccaatgtagcagttgcttagccttggtgatatc 7

---

>gb|AY922313.1| Populus tomentosa UDP-glucuronic acid decarboxylase 1 (UXS1) mRNA,
            complete cds
          Length = 1482

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 99/121 (81%)
 Strand = Plus / Minus

                                                                        
Query: 416  tatggggatcatcagctgtgttgggcttgaattcaattgttgacattgggtcgattgttt 475
            |||| ||||||||||| |||||||| |||||||| |||||||   |||  || || || |
Sbjct: 1300 tatgtggatcatcagcagtgttgggtttgaattctattgttgcacttgaatcaatggtct 1241

                                                                        
Query: 476  ccttcacaacctctgcaagttccaacatggtgaactctccagggtttcctagattgaaag 535
            |||| | |||||||||||| || | ||| ||||||||||| ||||| || || |||||||
Sbjct: 1240 ccttgataacctctgcaagctcgagcatagtgaactctcctgggttgccaaggttgaaag 1181

             
Query: 536  g 536
            |
Sbjct: 1180 g 1180

---

>gb|AY677178.1| Hordeum vulgare UDP-D-glucuronate decarboxylase (UXS2) mRNA, complete
            cds
          Length = 1380

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 102/128 (79%)
 Strand = Plus / Minus

                                                                        
Query: 463  gggtcgattgtttccttcacaacctctgcaagttccaacatggtgaactctccagggttt 522
            |||||||| || ||||  |||||||  || ||||||| |||||||||||| || ||||| 
Sbjct: 1004 gggtcgatggtgtcctggacaaccttggccagttccagcatggtgaactcaccggggttg 945

                                                                        
Query: 523  cctagattgaaagggccaatatgatcactctccatcagagccatcaatccagcaaccaga 582
            || |  ||||| || ||||| |||||||  ||||||||   |||||| ||  |||||| |
Sbjct: 944  cccaagttgaatggcccaatgtgatcaccttccatcagcctcatcaacccctcaaccaaa 885

                    
Query: 583  tcagaaac 590
            ||||||||
Sbjct: 884  tcagaaac 877

---

>ref|NM_115212.2| Arabidopsis thaliana UXS1 (UDP-GLUCURONIC ACID DECARBOXYLASE 1);
            catalytic AT3G53520 (UXS1) transcript variant AT3G53520.2
            mRNA, complete cds
          Length = 1531

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 475  tccttcacaacctctgcaagttccaacatggtgaactctccagggtt 521
            ||||| || |||||||||||||| | ||| ||||| |||||||||||
Sbjct: 1085 tccttaaccacctctgcaagttcaagcattgtgaattctccagggtt 1039

---

>ref|NM_180363.1| Arabidopsis thaliana UXS1 (UDP-GLUCURONIC ACID DECARBOXYLASE 1);
            catalytic AT3G53520 (UXS1) transcript variant AT3G53520.1
            mRNA, complete cds
          Length = 1529

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 475  tccttcacaacctctgcaagttccaacatggtgaactctccagggtt 521
            ||||| || |||||||||||||| | ||| ||||| |||||||||||
Sbjct: 1083 tccttaaccacctctgcaagttcaagcattgtgaattctccagggtt 1037

---

>gb|AY065075.1| Arabidopsis thaliana dTDP-glucose 4-6-dehydratase-like protein
            (F4P12.220) mRNA, complete cds
          Length = 1666

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 475  tccttcacaacctctgcaagttccaacatggtgaactctccagggtt 521
            ||||| || |||||||||||||| | ||| ||||| |||||||||||
Sbjct: 1219 tccttaaccacctctgcaagttcaagcattgtgaattctccagggtt 1173

---

>emb|BX823214.1|CNS0A7KG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS11ZE03 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1608

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 475  tccttcacaacctctgcaagttccaacatggtgaactctccagggtt 521
            ||||| || |||||||||||||| | ||| ||||| |||||||||||
Sbjct: 1209 tccttaaccacctctgcaagttcaagcattgtgaattctccagggtt 1163

---

>emb|BX823176.1|CNS0A7M4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB95ZE05 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1648

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 475  tccttcacaacctctgcaagttccaacatggtgaactctccagggtt 521
            ||||| || |||||||||||||| | ||| ||||| |||||||||||
Sbjct: 1263 tccttaaccacctctgcaagttcaagcattgtgaattctccagggtt 1217

---

>emb|BX822635.1|CNS0A7MG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB54ZH12 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1604

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 475  tccttcacaacctctgcaagttccaacatggtgaactctccagggtt 521
            ||||| || |||||||||||||| | ||| ||||| |||||||||||
Sbjct: 1206 tccttaaccacctctgcaagttcaagcattgtgaattctccagggtt 1160

---

>gb|BT003355.1| Arabidopsis thaliana dTDP-glucose 4-6-dehydratase-like protein
            (At3g53520) mRNA, complete cds
          Length = 1492

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 475  tccttcacaacctctgcaagttccaacatggtgaactctccagggtt 521
            ||||| || |||||||||||||| | ||| ||||| |||||||||||
Sbjct: 1112 tccttaaccacctctgcaagttcaagcattgtgaattctccagggtt 1066

---

>gb|AF387787.1| Arabidopsis thaliana UDP-glucuronic acid decarboxylase (UXS1) mRNA,
            complete cds
          Length = 1302

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 475  tccttcacaacctctgcaagttccaacatggtgaactctccagggtt 521
            ||||| || |||||||||||||| | ||| ||||| |||||||||||
Sbjct: 1106 tccttaaccacctctgcaagttcaagcattgtgaattctccagggtt 1060

---

>emb|AL132966.1|ATF4P12 Arabidopsis thaliana DNA chromosome 3, BAC clone F4P12
          Length = 144628

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 483   aacctctgcaagttccaacatggtgaactctccagggtt 521
             ||||||||||||||| | ||| ||||| |||||||||||
Sbjct: 84227 aacctctgcaagttcaagcattgtgaattctccagggtt 84189

---

>gb|AY922314.1| Populus tomentosa UDP-glucuronic acid decarboxylase 2 (UXS2) mRNA,
            complete cds
          Length = 1466

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 115/146 (78%)
 Strand = Plus / Minus

                                                                        
Query: 391  gccttggtaatatcgggctttctcatatggggatcatcagctgtgttgggcttgaattca 450
            |||||||||||||| || |||||| | || || |||||  ||||||| ||| ||||||| 
Sbjct: 1299 gccttggtaatatcaggttttctcttgtgagggtcatcttctgtgttaggcctgaattct 1240

                                                                        
Query: 451  attgttgacattgggtcgattgtttccttcacaacctctgcaagttccaacatggtgaac 510
            ||  |||   ||||||| || |||||||  || ||||  ||||| || | ||||||||| 
Sbjct: 1239 atccttgcatttgggtcaatggtttcctggaccacctgagcaagctcgagcatggtgaat 1180

                                      
Query: 511  tctccagggtttcctagattgaaagg 536
            || || || ||||| |||||||||||
Sbjct: 1179 tcacctggatttccaagattgaaagg 1154

---

>emb|CR683678.1|CNS0FQH6 Tetraodon nigroviridis full-length cDNA
          Length = 1177

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 280  tctcactgttgccttgattac 300
            |||||||||||||||||||||
Sbjct: 1136 tctcactgttgccttgattac 1116

---

>emb|BX664618.12| Zebrafish DNA sequence from clone DKEYP-82A1 in linkage group 8, complete
              sequence
          Length = 135532

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 583    tcagaaacatactgaaaactt 603
              |||||||||||||||||||||
Sbjct: 127340 tcagaaacatactgaaaactt 127360

---

>emb|CR388058.6| Zebrafish DNA sequence from clone DKEY-184L17 in linkage group 8,
              complete sequence
          Length = 141160

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 391    gccttggtaatatcgggcttt 411
              |||||||||||||||||||||
Sbjct: 134013 gccttggtaatatcgggcttt 134033

---

>ref|NM_103267.1| Arabidopsis thaliana cysteine-type peptidase AT1G35650 mRNA,
           complete cds
          Length = 2211

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 313 cttttgcggaaatctgtcac 332
           ||||||||||||||||||||
Sbjct: 655 cttttgcggaaatctgtcac 674

---

>gb|AC146455.3| Pan troglodytes BAC clone CH251-460B7 from Y, complete sequence
          Length = 211439

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 363   ctttggctcccaacctagcatttgcttc 390
             |||||| |||||||||||||| ||||||
Sbjct: 81571 ctttggttcccaacctagcatgtgcttc 81544

---

>gb|AC126670.4| Mus musculus BAC clone RP24-469G14 from chromosome 1, complete sequence
          Length = 200595

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 89     tccttcactcaacttctata 108
              ||||||||||||||||||||
Sbjct: 113650 tccttcactcaacttctata 113669

---

>emb|AJ297276.1|PNI297276 Populus nigra microsatellite DNA, clone WPMS07
          Length = 659

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                       
Query: 398 taatatcgggctttctcatatggggatcatcagctgtgttgggcttgaattcaattgttg 457
           ||||||| || || ||| |||| ||||||||||| ||||| ||  ||||||| |||||||
Sbjct: 447 taatatctggtttcctcttatgtggatcatcagcagtgtttggtctgaattctattgttg 388

---

>emb|CR318599.18| Zebrafish DNA sequence from clone DKEY-28D5 in linkage group 22, complete
              sequence
          Length = 222575

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 116    atgtggacaaaaaacagttt 135
              ||||||||||||||||||||
Sbjct: 159608 atgtggacaaaaaacagttt 159627

---

>emb|CR293522.9| Zebrafish DNA sequence from clone DKEY-29I3 in linkage group 7,
             complete sequence
          Length = 196250

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 447   ttcaattgttgacattgggt 466
             ||||||||||||||||||||
Sbjct: 91825 ttcaattgttgacattgggt 91844

---

>emb|AL353725.14| Human DNA sequence from clone RP11-218C11 on chromosome 10, complete
             sequence
          Length = 61524

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 58    aatagctccagaaatatagcccct 81
             ||||||||||||||| ||||||||
Sbjct: 39480 aatagctccagaaatttagcccct 39503

---

>emb|AL139331.19| Human DNA sequence from clone RP11-328M4 on chromosome 6 Contains a novel
              gene,  the FOXP4 gene for forkhead box P4 and five CpG
              islands, complete sequence
          Length = 180547

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 51     tgaacccaatagctccagaa 70
              ||||||||||||||||||||
Sbjct: 151558 tgaacccaatagctccagaa 151577

---

>emb|AL157776.15| Human DNA sequence from clone RP11-68J15 on chromosome 6 Contains part
             of the NUP153 gene for nucleoporin 153kD, complete
             sequence
          Length = 70043

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 584   cagaaacatactgaaaactt 603
             ||||||||||||||||||||
Sbjct: 63191 cagaaacatactgaaaactt 63210

---

>emb|AL049824.4|HSJ117L23 Human DNA sequence from clone RP1-117L23 on chromosome 1p33-34.2
            Contains part of the PPIE gene for peptidylprolyl
            isomerase E (cyclophilin E) and the 3' end of the BMP8B
            gene for bone morphogenetic protein 8b (osteogenic
            protein 2), complete sequence
          Length = 19783

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 200  aaacacagaattgtactgaa 219
            ||||||||||||||||||||
Sbjct: 9649 aaacacagaattgtactgaa 9668

---

>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 363     ctttggctcccaacctagcatttgcttc 390
               |||||| |||||||||||||| ||||||
Sbjct: 7573743 ctttggttcccaacctagcatgtgcttc 7573716

---

>gb|AC147659.5| Pan troglodytes BAC clone CH251-425E12 from chromosome y, complete
              sequence
          Length = 168988

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 363    ctttggctcccaacctagcatttgcttc 390
              |||||| |||||||||||||| ||||||
Sbjct: 152890 ctttggttcccaacctagcatgtgcttc 152863

---

>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome
          Length = 6260361

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 354    aagagatacctttggctcccaacc 377
              ||||||||||||||||| ||||||
Sbjct: 942339 aagagatacctttggcttccaacc 942362

---

>gb|AC018866.9| Homo sapiens BAC clone RP11-57J18 from 2, complete sequence
          Length = 154983

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 534   agggccaatatgatcactct 553
             ||||||||||||||||||||
Sbjct: 11682 agggccaatatgatcactct 11663

---

>emb|BX322625.9| Mouse DNA sequence from clone RP24-158I12 on chromosome 2, complete
             sequence
          Length = 98004

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   tatacaaacacagaattgta 214
             ||||||||||||||||||||
Sbjct: 14716 tatacaaacacagaattgta 14697

---

>gb|AC007887.9|AC007887 Genomic sequence for Arabidopsis thaliana BAC F15O4 from chromosome I,
             complete sequence
          Length = 158096

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 313   cttttgcggaaatctgtcac 332
             ||||||||||||||||||||
Sbjct: 28389 cttttgcggaaatctgtcac 28408

---

>gb|AC007126.6|AC007126 Homo sapiens chromosome 4 clone C0496D08, complete sequence
          Length = 218698

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 194   ttatacaaacacagaattgtactg 217
             ||||||||||||||| ||||||||
Sbjct: 38696 ttatacaaacacagatttgtactg 38673

---

>emb|AL845467.3| Mouse DNA sequence from clone RP23-435G20 on chromosome 2, complete
              sequence
          Length = 201400

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 142    tctgtccaatctcaccaaga 161
              ||||||||||||||||||||
Sbjct: 113106 tctgtccaatctcaccaaga 113125


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,190,858
Number of Sequences: 3902068
Number of extensions: 6190858
Number of successful extensions: 109629
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 109455
Number of HSP's gapped (non-prelim): 172
length of query: 606
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 583
effective length of database: 17,143,297,704
effective search space: 9994542561432
effective search space used: 9994542561432
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---