Clone Information

BLAST Search Result

Clone Name	rbags15n05
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 h...	144	2e-34
2	CD48A_ARATH (P54609) Cell division control protein 48 homolog A ...	143	4e-34
3	CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E ...	139	4e-33
4	CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Val...	136	5e-32
5	CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog	134	2e-31
6	TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER...	116	4e-26
7	TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER...	116	4e-26
8	TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (T...	116	4e-26
9	TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (T...	116	4e-26
10	TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (T...	113	3e-25
11	TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase h...	108	1e-23
12	TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase h...	105	7e-23
13	CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48	74	2e-13
14	CDC48_YEAST (P25694) Cell division control protein 48	74	3e-13
15	CDAT_PLAF7 (P46468) Putative cell division cycle ATPase	46	8e-05
16	Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297	44	4e-04
17	KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (E...	39	0.008
18	CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C ...	39	0.013
19	PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteaso...	38	0.017
20	Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156	37	0.029
21	KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC ...	37	0.029
22	KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (E...	37	0.029
23	PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteaso...	37	0.038
24	KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3...	37	0.050
25	KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like ...	36	0.086
26	KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-lik...	36	0.086
27	PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteaso...	35	0.11
28	KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3...	35	0.15
29	KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-lik...	35	0.19
30	PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteaso...	35	0.19
31	KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3...	35	0.19
32	PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteaso...	34	0.25
33	VAT_THEAC (O05209) VCP-like ATPase	34	0.33
34	PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteaso...	33	0.43
35	ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein...	33	0.43
36	PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteaso...	33	0.43
37	SPAST_HUMAN (Q9UBP0) Spastin	33	0.56
38	SAV_SULAC (Q07590) SAV protein	33	0.56
39	SPAST_MOUSE (Q9QYY8) Spastin	33	0.56
40	PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Prote...	33	0.56
41	PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Prote...	33	0.56
42	PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Prote...	33	0.56
43	FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.2...	32	0.95
44	PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S1...	32	1.2
45	FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.2...	32	1.2
46	AFG2_YEAST (P32794) Protein AFG2	32	1.2
47	MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)	32	1.2
48	FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)	32	1.2
49	FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)	32	1.2
50	FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)	32	1.2
51	FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)	32	1.2
52	FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)	32	1.2
53	PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteaso...	32	1.2
54	FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3....	32	1.6
55	FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3....	32	1.6
56	ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein...	32	1.6
57	SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia...	31	2.1
58	FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.2...	31	2.1
59	FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)	31	2.1
60	PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteaso...	31	2.1
61	ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1	31	2.8
62	ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1	31	2.8
63	ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1	31	2.8
64	PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxi...	31	2.8
65	FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloropl...	31	2.8
66	PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteaso...	30	3.6
67	FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3....	30	3.6
68	PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteaso...	30	3.6
69	ADRO_BOVIN (P08165) NADPH:adrenodoxin oxidoreductase, mitochondr...	30	4.7
70	MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC ...	30	4.7
71	FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.2...	30	4.7
72	FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.2...	30	4.7
73	TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-bind...	30	6.1
74	SEC18_CANAL (P34732) Vesicular-fusion protein SEC18	30	6.1
75	CDCH_HALSA (Q9HPF0) Protein cdcH	30	6.1
76	FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)	30	6.1
77	FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloropl...	29	8.0
78	AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)	29	8.0
79	AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Parapleg...	29	8.0
80	AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)	29	8.0
81	SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog	29	8.0

>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D|
            (AtCDC48d) (Transitional endoplasmic reticulum ATPase D)
          Length = 815

 Score =  144 bits (363), Expect = 2e-34
 Identities = 76/112 (67%), Positives = 80/112 (71%)
 Frame = -2

Query: 564  AKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXX 385
            AKD+DL ALAKYTQGFSGADITEICQR+CKYAI                +P         
Sbjct: 671  AKDVDLRALAKYTQGFSGADITEICQRSCKYAIRENIEKDIEKERKRAESPEAMEEDEEE 730

Query: 384  XXXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDQP 229
                I+A HFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPD P
Sbjct: 731  IAE-IKAGHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDAP 781



 Score = 32.0 bits (71), Expect = 1.2
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAI 466
           A+D+DL  ++K T G+ GAD+  +C  A    I
Sbjct: 395 AEDVDLERVSKDTHGYVGADLAALCTEAALQCI 427

to top

>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)|
          Length = 809

 Score =  143 bits (360), Expect = 4e-34
 Identities = 76/108 (70%), Positives = 79/108 (73%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXX 385
           AKD+D+ ALAKYTQGFSGADITEICQRACKYAI                NP         
Sbjct: 671 AKDVDIGALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKEKRRSENPEAMEEDGVD 730

Query: 384 XXXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 241
              EI+AAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF
Sbjct: 731 EVSEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 778



 Score = 32.3 bits (72), Expect = 0.95
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAI 466
           A+D+DL  ++K T G+ GAD+  +C  A    I
Sbjct: 394 AEDVDLERISKDTHGYVGADLAALCTEAALQCI 426

to top

>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)|
           (Transitional endoplasmic reticulum ATPase E)
          Length = 810

 Score =  139 bits (351), Expect = 4e-33
 Identities = 76/109 (69%), Positives = 79/109 (72%), Gaps = 1/109 (0%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXX 385
           AKD+D++ALAKYTQGFSGADITEICQRACKYAI                NP         
Sbjct: 670 AKDVDVTALAKYTQGFSGADITEICQRACKYAIRENIEKDIENERRRSQNPEAMEEDMVD 729

Query: 384 XXXE-IRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 241
                IRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF
Sbjct: 730 DEVSEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 778



 Score = 32.3 bits (72), Expect = 0.95
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAI 466
           A+D+DL  ++K T G+ GAD+  +C  A    I
Sbjct: 394 AEDVDLERISKDTHGYVGADLAALCTEAALQCI 426

to top

>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing|
            protein homolog) (VCP)
          Length = 807

 Score =  136 bits (342), Expect = 5e-32
 Identities = 73/111 (65%), Positives = 80/111 (72%), Gaps = 1/111 (0%)
 Frame = -2

Query: 564  AKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXX 385
            AK++DL ALA++TQGFSGADITEICQRACKYAI                NP         
Sbjct: 671  AKNVDLRALARHTQGFSGADITEICQRACKYAIRENIEKDIERERKSRENPEAMDEDTVD 730

Query: 384  XXXE-IRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPD 235
                 I+AAHFEESMK+ARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFP+
Sbjct: 731  DEVAEIKAAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPE 781



 Score = 31.6 bits (70), Expect = 1.6
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 558 DIDLSALAKYTQGFSGADITEICQRACKYAI 466
           D+DL  +AK T G+ GAD+  +C  A    I
Sbjct: 397 DVDLERIAKDTHGYVGADLAALCTEAALQCI 427

to top

>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog|
          Length = 805

 Score =  134 bits (336), Expect = 2e-31
 Identities = 73/110 (66%), Positives = 78/110 (70%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXX 385
           +KDIDL ALAK+TQGFSGAD+TEICQRACKYAI                NP         
Sbjct: 671 SKDIDLRALAKHTQGFSGADVTEICQRACKYAIRENIEKDIEREKRRQENPDSMDEDVDE 730

Query: 384 XXXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPD 235
               I+ AHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFG+EFRF D
Sbjct: 731 VPE-IKPAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFAD 779



 Score = 30.8 bits (68), Expect = 2.8
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAI 466
           A+++DL  ++K T G+ GAD+  +C  A    I
Sbjct: 395 AEEVDLERISKDTHGYVGADLAALCTEAALQCI 427

to top

>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score =  116 bits (291), Expect = 4e-26
 Identities = 65/109 (59%), Positives = 71/109 (65%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXX 385
           AKD+DL  LAK T GFSGAD+TEICQRACK AI                NP         
Sbjct: 666 AKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDD 725

Query: 384 XXXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFP 238
              EIR  HFEE+M++ARRSVSD DIRKY+ FAQTLQQSRGFGS FRFP
Sbjct: 726 PVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFP 773



 Score = 31.2 bits (69), Expect = 2.1
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAI 466
           A D+DL  +A  T G  GAD+  +C  A   AI
Sbjct: 390 ADDVDLEQVANETHGHVGADLAALCSEAALQAI 422

to top

>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score =  116 bits (291), Expect = 4e-26
 Identities = 65/109 (59%), Positives = 71/109 (65%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXX 385
           AKD+DL  LAK T GFSGAD+TEICQRACK AI                NP         
Sbjct: 666 AKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDD 725

Query: 384 XXXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFP 238
              EIR  HFEE+M++ARRSVSD DIRKY+ FAQTLQQSRGFGS FRFP
Sbjct: 726 PVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFP 773



 Score = 31.2 bits (69), Expect = 2.1
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAI 466
           A D+DL  +A  T G  GAD+  +C  A   AI
Sbjct: 390 ADDVDLEQVANETHGHVGADLAALCSEAALQAI 422

to top

>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score =  116 bits (291), Expect = 4e-26
 Identities = 65/109 (59%), Positives = 71/109 (65%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXX 385
           AKD+DL  LAK T GFSGAD+TEICQRACK AI                NP         
Sbjct: 666 AKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDD 725

Query: 384 XXXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFP 238
              EIR  HFEE+M++ARRSVSD DIRKY+ FAQTLQQSRGFGS FRFP
Sbjct: 726 PVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFP 773



 Score = 31.2 bits (69), Expect = 2.1
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAI 466
           A D+DL  +A  T G  GAD+  +C  A   AI
Sbjct: 390 ADDVDLEQVANETHGHVGADLAALCSEAALQAI 422

to top

>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score =  116 bits (291), Expect = 4e-26
 Identities = 65/109 (59%), Positives = 71/109 (65%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXX 385
           AKD+DL  LAK T GFSGAD+TEICQRACK AI                NP         
Sbjct: 666 AKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAMEVEEDD 725

Query: 384 XXXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFP 238
              EIR  HFEE+M++ARRSVSD DIRKY+ FAQTLQQSRGFGS FRFP
Sbjct: 726 PVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFP 773



 Score = 31.2 bits (69), Expect = 2.1
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAI 466
           A D+DL  +A  T G  GAD+  +C  A   AI
Sbjct: 390 ADDVDLEQVANETHGHVGADLAALCSEAALQAI 422

to top

>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit)
          Length = 805

 Score =  113 bits (283), Expect = 3e-25
 Identities = 64/109 (58%), Positives = 70/109 (64%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXX 385
           AKD+D+  LAK T GFSGAD+TEICQRACK AI                NP         
Sbjct: 667 AKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERDRQTNPSAMEVEEDD 726

Query: 384 XXXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFP 238
              EIR  HFEE+M+ ARRSVSD DIRKY+ FAQTLQQSRGFGS FRFP
Sbjct: 727 PVPEIRRDHFEEAMRLARRSVSDNDIRKYEMFAQTLQQSRGFGS-FRFP 774



 Score = 30.0 bits (66), Expect = 4.7
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -2

Query: 558 DIDLSALAKYTQGFSGADITEICQRACKYAI 466
           D+DL  +A  T G  GAD+  +C  A   AI
Sbjct: 393 DVDLEQVANETHGHVGADLAALCSEAALQAI 423

to top

>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1|
            (p97/CDC48 homolog 1)
          Length = 809

 Score =  108 bits (269), Expect = 1e-23
 Identities = 59/115 (51%), Positives = 71/115 (61%), Gaps = 4/115 (3%)
 Frame = -2

Query: 564  AKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXX 385
            +KD+DL+ LAK T GFSGAD+TEICQRACK AI                           
Sbjct: 674  SKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEIRIEKERQDRQARGEELMED 733

Query: 384  XXXE----IRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDQ 232
               +    I  AHFEE+MK+ARRSV+D DIRKY+ FAQTLQQSRGFG+ F+FP +
Sbjct: 734  DAVDPVPEITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNNFKFPGE 788



 Score = 30.4 bits (67), Expect = 3.6
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRA 481
           A D+DL  +A    GF GAD+  +C  A
Sbjct: 397 ADDVDLEQIANECHGFVGADLASLCSEA 424

to top

>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2|
            (p97/CDC48 homolog 2)
          Length = 810

 Score =  105 bits (263), Expect = 7e-23
 Identities = 58/113 (51%), Positives = 69/113 (61%), Gaps = 4/113 (3%)
 Frame = -2

Query: 558  DIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXX 379
            D+DL+ LAK T GFSGAD+TEICQRACK AI                             
Sbjct: 674  DLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIRQEKERQDRSARGEELMEDEL 733

Query: 378  XE----IRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDQ 232
             +    I  AHFEE+MK+ARRSV+D DIRKY+ FAQTLQQSRGFG+ F+FP +
Sbjct: 734  ADPVPEITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNNFKFPGE 786



 Score = 29.3 bits (64), Expect = 8.0
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 561 KDIDLSALAKYTQGFSGADITEICQRA 481
           +D+DL  +A    GF GAD+  +C  A
Sbjct: 397 EDVDLEQVANECHGFVGADLASLCSEA 423

to top

>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48|
          Length = 815

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 45/112 (40%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
 Frame = -2

Query: 564  AKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXX 385
            A+D+DL A+AK T GFSGAD+  + QRA K AI                 P         
Sbjct: 686  AEDVDLRAVAKATHGFSGADLEFVVQRAVKLAIKDSIEEDIKRENETGEAPADDVVMDED 745

Query: 384  XXXE-IRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGF-GSEFRFPD 235
                 ++  H EE+MK ARRSVSDA++R+Y+A+A  L  SRG  G +F   D
Sbjct: 746  ASVSQVQRHHVEEAMKMARRSVSDAEVRRYEAYAHQLLTSRGLTGFQFDSAD 797



 Score = 30.4 bits (67), Expect = 3.6
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAI 466
           A D+DL  +A  T G+ G+D+  +C  A    I
Sbjct: 411 ADDVDLEQIAAETHGYVGSDLASLCSEAAMQQI 443

to top

>CDC48_YEAST (P25694) Cell division control protein 48|
          Length = 835

 Score = 73.9 bits (180), Expect = 3e-13
 Identities = 45/121 (37%), Positives = 61/121 (50%), Gaps = 12/121 (9%)
 Frame = -2

Query: 555  IDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXX 376
            ++L+A+AK TQGFSGAD+  I QRA KYAI                              
Sbjct: 680  LELTAIAKATQGFSGADLLYIVQRAAKYAIKDSIEAHRQHEAEKEVKVEGEDVEMTDEGA 739

Query: 375  E------------IRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFPDQ 232
            +            I   HF E+MK A+RSVSDA++R+Y+A++Q ++ SRG  S F F D 
Sbjct: 740  KAEQEPEVDPVPYITKEHFAEAMKTAKRSVSDAELRRYEAYSQQMKASRGQFSNFNFNDA 799

Query: 231  P 229
            P
Sbjct: 800  P 800



 Score = 35.0 bits (79), Expect = 0.15
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAI 466
           A D+DL ALA  T G+ GADI  +C  A    I
Sbjct: 401 ADDVDLEALAAETHGYVGADIASLCSEAAMQQI 433

to top

>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase|
          Length = 1229

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 7/102 (6%)
 Frame = -2

Query: 561  KDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXX 382
            +D+D+  +AK T+GFSGADIT +CQ A   AI                            
Sbjct: 1123 EDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKETIHLLNIRKKEQEEQRKKNKNSFKID 1182

Query: 381  XX-------EIRAAHFEESMKYARRSVSDADIRKYQAFAQTL 277
                      +   HF+ + K AR S+   D+ KY+ F + L
Sbjct: 1183 DTDTYDPVPTLSKKHFDLAFKNARISIQPEDVLKYEKFKEKL 1224

to top

>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297|
          Length = 733

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 26/90 (28%), Positives = 41/90 (45%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXX 385
           A D+++  LA+ T+G+SGADI  +C+ A   AI                           
Sbjct: 643 ADDVNIEELAEKTEGYSGADIEAVCREAGMLAIRELIKPGM----------TREEAKEAA 692

Query: 384 XXXEIRAAHFEESMKYARRSVSDADIRKYQ 295
              +I   HFEE++K  R S++  D+ KY+
Sbjct: 693 KKLKITKKHFEEALKKVRPSLTKEDVEKYE 722



 Score = 37.4 bits (85), Expect = 0.029
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAI 466
           A+D+DL  LA+ T GF GAD+  +C+ A  +A+
Sbjct: 369 AEDVDLEELAELTNGFVGADLEALCKEAAMHAL 401

to top

>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin)
          Length = 491

 Score = 39.3 bits (90), Expect = 0.008
 Identities = 25/90 (27%), Positives = 40/90 (44%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXX 385
           A D+DL+++A+  +G+SGADIT +C+ A   A+                           
Sbjct: 401 ADDVDLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSKEEMHMPTT-- 458

Query: 384 XXXEIRAAHFEESMKYARRSVSDADIRKYQ 295
                    FE ++K   +SVS ADI +Y+
Sbjct: 459 ------MEDFEMALKKVSKSVSAADIERYE 482

to top

>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)|
          Length = 820

 Score = 38.5 bits (88), Expect = 0.013
 Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
 Frame = -2

Query: 555 IDLSALAKYT-QGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXX 379
           +DL  +AK   +GFSGAD+  + Q+A   A+                +            
Sbjct: 717 VDLDGIAKNNCEGFSGADLAHLVQKATFQAV----------EEMIGSSESSEDDVTDITQ 766

Query: 378 XEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSE 250
             I+  HFE+++     SV+    R Y A +  LQ+S G  +E
Sbjct: 767 CTIKTRHFEQALSLVSPSVNKQQRRHYDALSTKLQESVGRNTE 809

to top

>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 436

 Score = 38.1 bits (87), Expect = 0.017
 Identities = 19/33 (57%), Positives = 22/33 (66%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAI 466
           A+D+DL  LAK T+G SGADI  IC  A   AI
Sbjct: 369 AEDVDLQKLAKITEGASGADIKAICTEAGMMAI 401

to top

>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156|
          Length = 903

 Score = 37.4 bits (85), Expect = 0.029
 Identities = 15/33 (45%), Positives = 24/33 (72%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAI 466
           A+D++L  LAK T+G++GADI  +C+ A   A+
Sbjct: 640 AEDVNLEELAKKTEGYTGADIEALCREAAMLAV 672



 Score = 35.0 bits (79), Expect = 0.15
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAI 466
           A+D+DL  LA  T GF GAD+  +C+ A   A+
Sbjct: 366 AEDVDLDYLADVTHGFVGADLAALCKEAAMRAL 398

to top

>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin)
          Length = 491

 Score = 37.4 bits (85), Expect = 0.029
 Identities = 24/90 (26%), Positives = 40/90 (44%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXX 385
           A D++L+++A+  +G+SGADIT +C+ A   A+                           
Sbjct: 401 ADDVNLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSREEMHMPTT-- 458

Query: 384 XXXEIRAAHFEESMKYARRSVSDADIRKYQ 295
                    FE ++K   +SVS ADI +Y+
Sbjct: 459 ------MEDFEMALKKVSKSVSAADIERYE 482

to top

>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin) (Lipotransin)
          Length = 491

 Score = 37.4 bits (85), Expect = 0.029
 Identities = 24/90 (26%), Positives = 40/90 (44%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXX 385
           A D++L+++A+  +G+SGADIT +C+ A   A+                           
Sbjct: 401 ADDVNLASIAENMEGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSREAMHMPTT-- 458

Query: 384 XXXEIRAAHFEESMKYARRSVSDADIRKYQ 295
                    FE ++K   +SVS ADI +Y+
Sbjct: 459 ------MEDFEMALKKISKSVSAADIERYE 482

to top

>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 398

 Score = 37.0 bits (84), Expect = 0.038
 Identities = 17/33 (51%), Positives = 22/33 (66%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAI 466
           A+D+D   LA+ T+G SGADI  IC  A  +AI
Sbjct: 331 AEDVDFKELARITEGASGADIKAICTEAGMFAI 363

to top

>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin)
          Length = 516

 Score = 36.6 bits (83), Expect = 0.050
 Identities = 16/33 (48%), Positives = 23/33 (69%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAI 466
           A DIDL ++A+   G+SGADIT +C+ A   A+
Sbjct: 426 ADDIDLKSIAEKMDGYSGADITNVCRDASMMAM 458

to top

>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 488

 Score = 35.8 bits (81), Expect = 0.086
 Identities = 25/88 (28%), Positives = 37/88 (42%)
 Frame = -2

Query: 558 DIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXX 379
           DI L  +A+ T+G+SGADIT IC+ A   A+                             
Sbjct: 400 DIHLEDIAEKTEGYSGADITNICRDASLMAM--------RRRINGLSPEEIRALSKEELQ 451

Query: 378 XEIRAAHFEESMKYARRSVSDADIRKYQ 295
             +     E ++K   +SVS AD+ KY+
Sbjct: 452 MPVTRGDLELALKKIAKSVSAADLEKYE 479

to top

>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 490

 Score = 35.8 bits (81), Expect = 0.086
 Identities = 24/88 (27%), Positives = 37/88 (42%)
 Frame = -2

Query: 558 DIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXX 379
           DI L  +A+  +G+SGADIT +C+ A   A+                             
Sbjct: 402 DIQLEDIAEKIEGYSGADITNVCRDASLMAM--------RRRINGLSPEEIRALSKEELQ 453

Query: 378 XEIRAAHFEESMKYARRSVSDADIRKYQ 295
             +    FE ++K   +SVS AD+ KY+
Sbjct: 454 MPVTKGDFELALKKIAKSVSAADLEKYE 481

to top

>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 409

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 17/33 (51%), Positives = 22/33 (66%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAI 466
           A D+DL A+AK T+GFSGAD+  +   A   AI
Sbjct: 329 APDVDLEAIAKLTEGFSGADLKAVVVEAGYNAI 361

to top

>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin) (Fragment)
          Length = 486

 Score = 35.0 bits (79), Expect = 0.15
 Identities = 23/90 (25%), Positives = 37/90 (41%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXX 385
           A D+++  +A+   G+SGADIT +C+ A   A+                           
Sbjct: 398 ADDVNIECIAENMDGYSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSRDDMHMPTT-- 455

Query: 384 XXXEIRAAHFEESMKYARRSVSDADIRKYQ 295
                    FE ++K   +SVS +DI KY+
Sbjct: 456 ------MEDFEMALKKVSKSVSASDIEKYE 479

to top

>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 488

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 24/88 (27%), Positives = 36/88 (40%)
 Frame = -2

Query: 558 DIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXX 379
           D+ L  +A  T+G+SGADIT IC+ A   A+                             
Sbjct: 400 DVHLEDIADKTEGYSGADITNICRDASLMAM--------RRRINGLSPEEIRALSKEELQ 451

Query: 378 XEIRAAHFEESMKYARRSVSDADIRKYQ 295
             +     E ++K   +SVS AD+ KY+
Sbjct: 452 MPVTRGDLELALKKIAKSVSAADLEKYE 479

to top

>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 410

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAI 466
           A+++D+  LA+ T G SGAD+  IC  A  +AI
Sbjct: 341 AEEVDIELLARITDGASGADLKAICTEAGMFAI 373

to top

>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase)
           (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3
           protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein)
           (AtAAA1)
          Length = 523

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 20/90 (22%), Positives = 40/90 (44%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXX 385
           A D+++  +A+ T+G+SG D+T +C+ A    +                +          
Sbjct: 432 ASDVNIEDVARRTEGYSGDDLTNVCRDASMNGM-------RRKIAGKTRDEIKNMSKDDI 484

Query: 384 XXXEIRAAHFEESMKYARRSVSDADIRKYQ 295
               +    FEE+++  + SVS +DI K++
Sbjct: 485 SNDPVAMCDFEEAIRKVQPSVSSSDIEKHE 514

to top

>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 420

 Score = 34.3 bits (77), Expect = 0.25
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAI 466
           A+DID   LAK T+G SGAD+  I   A  +A+
Sbjct: 349 AEDIDFKKLAKATEGMSGADLKAIATEAGMFAV 381

to top

>VAT_THEAC (O05209) VCP-like ATPase|
          Length = 745

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 22/99 (22%), Positives = 43/99 (43%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXX 385
           A D+DL+ +A+ T+G+ GAD+  +C+ A   A                            
Sbjct: 655 APDVDLNDIAQRTEGYVGADLENLCREAGMNA-----------------------YRENP 691

Query: 384 XXXEIRAAHFEESMKYARRSVSDADIRKYQAFAQTLQQS 268
               +   +F +++K  R SV +  I+ Y+  ++T+ +S
Sbjct: 692 DATSVSQKNFLDALKTIRPSVDEEVIKFYRTLSETMSKS 730

to top

>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 421

 Score = 33.5 bits (75), Expect = 0.43
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAI 466
           A DID   LAK T+G SGAD+  I   A  +A+
Sbjct: 349 AGDIDFKKLAKVTEGMSGADLKAIATEAGMFAV 381

to top

>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B|
          Length = 362

 Score = 33.5 bits (75), Expect = 0.43
 Identities = 13/25 (52%), Positives = 20/25 (80%)
 Frame = -2

Query: 555 IDLSALAKYTQGFSGADITEICQRA 481
           ++LS +AK T GFSG+D+ E+C+ A
Sbjct: 286 VELSEIAKQTDGFSGSDLREMCRDA 310

to top

>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 393

 Score = 33.5 bits (75), Expect = 0.43
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = -2

Query: 558 DIDLSALAKYTQGFSGADITEICQRACKYAI 466
           +I+L  L++ T+GFSGADI  +C  A   AI
Sbjct: 326 NINLELLSQLTEGFSGADIKNVCVEAAYMAI 356

to top

>SPAST_HUMAN (Q9UBP0) Spastin|
          Length = 616

 Score = 33.1 bits (74), Expect = 0.56
 Identities = 23/85 (27%), Positives = 35/85 (41%)
 Frame = -2

Query: 552 DLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXE 373
           +L+ LA+ T G+SG+D+T + + A    I                 P             
Sbjct: 533 ELAQLARMTDGYSGSDLTALAKDAALGPI-------------RELKPEQVKNMSASEMRN 579

Query: 372 IRAAHFEESMKYARRSVSDADIRKY 298
           IR + F ES+K  +RSVS   +  Y
Sbjct: 580 IRLSDFTESLKKIKRSVSPQTLEAY 604

to top

>SAV_SULAC (Q07590) SAV protein|
          Length = 780

 Score = 33.1 bits (74), Expect = 0.56
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -2

Query: 558 DIDLSALAKYTQGFSGADITEICQRACKYAI 466
           D+DL  LA+ T G++GAD+  + + A  YA+
Sbjct: 401 DVDLDKLAEMTYGYTGADLAALAKEAAIYAL 431

to top

>SPAST_MOUSE (Q9QYY8) Spastin|
          Length = 614

 Score = 33.1 bits (74), Expect = 0.56
 Identities = 23/85 (27%), Positives = 35/85 (41%)
 Frame = -2

Query: 552 DLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXXE 373
           +L+ LA+ T G+SG+D+T + + A    I                 P             
Sbjct: 531 ELAQLARMTDGYSGSDLTALAKDAALGPI-------------RELKPEQVKNMSASEMRN 577

Query: 372 IRAAHFEESMKYARRSVSDADIRKY 298
           IR + F ES+K  +RSVS   +  Y
Sbjct: 578 IRLSDFTESLKKIKRSVSPQTLEAY 602

to top

>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase
           domain protein 44) (CADp44)
          Length = 389

 Score = 33.1 bits (74), Expect = 0.56
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -2

Query: 558 DIDLSALAKYTQGFSGADITEICQRACKYAI 466
           +ID  A+ K + GF+GAD+  +C  A  +AI
Sbjct: 325 EIDYEAIVKLSDGFNGADLRNVCTEAGMFAI 355

to top

>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score = 33.1 bits (74), Expect = 0.56
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -2

Query: 558 DIDLSALAKYTQGFSGADITEICQRACKYAI 466
           +ID  A+ K + GF+GAD+  +C  A  +AI
Sbjct: 325 EIDYEAIVKLSDGFNGADLRNVCTEAGMFAI 355

to top

>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score = 33.1 bits (74), Expect = 0.56
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -2

Query: 558 DIDLSALAKYTQGFSGADITEICQRACKYAI 466
           +ID  A+ K + GF+GAD+  +C  A  +AI
Sbjct: 325 EIDYEAIVKLSDGFNGADLRNVCTEAGMFAI 355

to top

>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 609

 Score = 32.3 bits (72), Expect = 0.95
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAI 466
           A ++DL A+A+ T G+SGAD+  +   A   A+
Sbjct: 329 APEVDLKAVARITGGYSGADLANVVNEAALLAV 361

to top

>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome|
           regulatory particle ATPase-like protein 4)
          Length = 406

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -2

Query: 558 DIDLSALAKYTQGFSGADITEICQRACKYAI 466
           +ID  A+ K + GFS AD+  +C  A  +AI
Sbjct: 342 EIDFEAVVKLSDGFSAADLRNVCTEAGMFAI 372

to top

>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 634

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYA 469
           AKD+DL  +A+ T GF+GAD+  +   A   A
Sbjct: 345 AKDVDLEFVARATPGFTGADLENLLNEAALLA 376

to top

>AFG2_YEAST (P32794) Protein AFG2|
          Length = 780

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 22/90 (24%), Positives = 36/90 (40%)
 Frame = -2

Query: 555 IDLSALAKYTQGFSGADITEICQRACKYAIXXXXXXXXXXXXXXXXNPXXXXXXXXXXXX 376
           +DL  LA  T+G+SGA++  +CQ A   AI                              
Sbjct: 707 VDLHELADRTEGYSGAEVVLLCQEAGLAAI-----------------------MEDLDVA 743

Query: 375 EIRAAHFEESMKYARRSVSDADIRKYQAFA 286
           ++   HFE++ K   R ++   +  Y+ FA
Sbjct: 744 KVELRHFEKAFKGIARGITPEMLSYYEEFA 773

to top

>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)|
          Length = 362

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -2

Query: 558 DIDLSALAKYTQGFSGADITEICQRA 481
           + DL  +A  T+GFSG+D+ E+C+ A
Sbjct: 280 EFDLQLIADNTKGFSGSDLKELCREA 305

to top

>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYA 469
           A DID + +A+ T GFSGAD+  +   A  +A
Sbjct: 341 APDIDAAIIARGTPGFSGADLANLVNEAALFA 372

to top

>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYA 469
           A DID + +A+ T GFSGAD+  +   A  +A
Sbjct: 341 ATDIDAAIIARGTPGFSGADLANLVNEAALFA 372

to top

>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYA 469
           A DID + +A+ T GFSGAD+  +   A  +A
Sbjct: 341 ATDIDAAIIARGTPGFSGADLANLVNEAALFA 372

to top

>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYA 469
           A DID + +A+ T GFSGAD+  +   A  +A
Sbjct: 341 APDIDAAIIARGTPGFSGADLANLVNEAALFA 372

to top

>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYA 469
           A DID + +A+ T GFSGAD+  +   A  +A
Sbjct: 341 APDIDAAIIARGTPGFSGADLANLVNEAALFA 372

to top

>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 399

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = -2

Query: 561 KDIDLSALAKYTQGFSGADITEICQRACKYAI 466
           K +DL A+A+ T+G SGAD+  I   A  +AI
Sbjct: 330 KGVDLRAIAEMTEGASGADLKAIATEAGMFAI 361

to top

>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 635

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYA 469
           A+D+D   LA+ T G+SGAD+  +   A  +A
Sbjct: 340 AQDVDAMTLARGTPGYSGADLANLVNEAALFA 371

to top

>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 381

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYA 469
           A+D+D   LA+ T G+SGAD+  +   A  +A
Sbjct: 86  AQDVDAMTLARGTPGYSGADLANLVNEAALFA 117

to top

>ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein 1-A|
          Length = 380

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 11/30 (36%), Positives = 21/30 (70%)
 Frame = -2

Query: 555 IDLSALAKYTQGFSGADITEICQRACKYAI 466
           I+L  +A  ++G+SG+D+ E+C+ A  Y +
Sbjct: 285 INLKEIASQSEGYSGSDLKELCRDAAMYRV 314

to top

>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)|
          Length = 795

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -2

Query: 540 LAKYTQGFSGADITEICQRACKYA 469
           LA+ T GFSGADI  IC  A  +A
Sbjct: 509 LAELTPGFSGADIANICNEAALHA 532

to top

>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 638

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYA 469
           A D+DL  +AK T G +GAD+  I   A   A
Sbjct: 367 ANDVDLQEIAKLTAGLAGADLANIINEAALLA 398

to top

>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 611

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYA 469
           +KD+D   +A+ T GFSGAD+  +   A  +A
Sbjct: 341 SKDVDPMIIARGTPGFSGADLANLVNEAALFA 372

to top

>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 399

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = -2

Query: 561 KDIDLSALAKYTQGFSGADITEICQRACKYAI 466
           K++DL  +A+ T+G SGAD+  I   A  +AI
Sbjct: 330 KNVDLRVIAEITEGASGADLKAIATEAGMFAI 361

to top

>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = -2

Query: 561 KDIDLSALAKYTQGFSGADITEICQRA 481
           + +DL  +A+ T GFSG+D+ E+C+ A
Sbjct: 280 RHVDLLEVAQETDGFSGSDLKEMCRDA 306

to top

>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = -2

Query: 561 KDIDLSALAKYTQGFSGADITEICQRA 481
           + +DL  +A+ T GFSG+D+ E+C+ A
Sbjct: 280 RHVDLLEVAQETDGFSGSDLKEMCRDA 306

to top

>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = -2

Query: 561 KDIDLSALAKYTQGFSGADITEICQRA 481
           + +DL  +A+ T GFSG+D+ E+C+ A
Sbjct: 280 RHVDLLEVAQETDGFSGSDLKEMCRDA 306

to top

>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)|
          Length = 1043

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -2

Query: 561 KDIDLSALAKYTQGFSGADITEICQRA 481
           K+ DL  +A+ T GFSGAD+  +C  A
Sbjct: 894 KNADLKLIAEKTAGFSGADLQGLCYNA 920

to top

>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (Fragment)
          Length = 662

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRA 481
           AKD+D   +A+ T GF+GAD+  +   A
Sbjct: 419 AKDVDFDKIARRTPGFTGADLQNLMNEA 446

to top

>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 430

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 14/33 (42%), Positives = 21/33 (63%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAI 466
           A+D++L  +AK T+G  GA++  IC  A   AI
Sbjct: 360 AEDVNLEEIAKMTEGCVGAELKAICTEAGMNAI 392

to top

>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)|
          Length = 616

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRA 481
           ++D+DL  +A+ T GF+GAD++ +   A
Sbjct: 350 SQDVDLDKIARRTPGFTGADLSNLLNEA 377

to top

>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 397

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -2

Query: 561 KDIDLSALAKYTQGFSGADITEICQRACKYAI 466
           K +DL  +A+ T+G SGAD+  I   A  +AI
Sbjct: 328 KGVDLRVIAEITEGASGADLKAIATEAGMFAI 359

to top

>ADRO_BOVIN (P08165) NADPH:adrenodoxin oxidoreductase, mitochondrial precursor|
           (EC 1.18.1.2) (Adrenodoxin reductase) (AR) (Ferredoxin
           reductase) (Ferredoxin--NADP(+) reductase)
          Length = 492

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 413 PKQWRRMRWTRWLRSELPTSRS 348
           P+ WR   W+ W R+ LP SRS
Sbjct: 3   PRCWRWWPWSSWTRTRLPPSRS 24

to top

>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)|
           (Katanin ATPase-containing subunit)
          Length = 472

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -2

Query: 558 DIDLSALAKYTQGFSGADITEICQRA 481
           +I+   LA  T+GFSGAD+  +C+ A
Sbjct: 383 EINYDDLAARTEGFSGADVVSLCRTA 408

to top

>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYA 469
           A+D+DL  +A+ T GF GAD+  +   A   A
Sbjct: 376 AEDVDLKLVAQQTPGFVGADLENVLNEAALVA 407

to top

>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYA 469
           A+D+DL  +A+ T GF GAD+  +   A   A
Sbjct: 376 AEDVDLKLVAQQTPGFVGADLENVLNEAALVA 407

to top

>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)|
          Length = 754

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = -2

Query: 561 KDIDLSALAKYTQGFSGADITEICQRA 481
           +D+D   + + T+GFSG+D+T + + A
Sbjct: 669 QDLDYELITEMTEGFSGSDLTSLAKEA 695

to top

>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18|
          Length = 794

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYAI 466
           + D++   L+  T+ F+GA+I  +C  A  YAI
Sbjct: 479 SSDVNFDELSTLTKNFTGAEIEGLCNSAKSYAI 511

to top

>CDCH_HALSA (Q9HPF0) Protein cdcH|
          Length = 742

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -2

Query: 558 DIDLSALAKYTQGFSGADITEICQRACKYAI 466
           D++LS LA  T GF GADI  + + A   A+
Sbjct: 378 DVNLSTLADDTHGFVGADIESLSKEAAMRAL 408

to top

>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 613

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYA 469
           ++D+D   +A+ T GFSGAD+  +   A  +A
Sbjct: 341 SEDVDPMIIARGTPGFSGADLANLVNEAALFA 372

to top

>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-)
          Length = 706

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRA 481
           AKD+D   +A+ T GF+G D+  +   A
Sbjct: 442 AKDVDFDKIARRTPGFTGVDLQNLMNEA 469

to top

>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)|
          Length = 663

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -2

Query: 564 AKDIDLSALAKYTQGFSGADITEICQRACKYA 469
           +KD     LA  T GF+GADI+ +C  A   A
Sbjct: 367 SKDALSRKLAALTPGFTGADISNVCNEAALIA 398

to top

>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like|
           protein)
          Length = 797

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -2

Query: 561 KDIDLSALAKYTQGFSGADITEICQRACKYA 469
           KD     LA  T GFSGAD+  +C  A   A
Sbjct: 502 KDKLARKLASLTPGFSGADVANVCNEAALIA 532

to top

>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)|
          Length = 802

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -2

Query: 561 KDIDLSALAKYTQGFSGADITEICQRACKYA 469
           KD     LA  T GFSGAD+  +C  A   A
Sbjct: 501 KDKLARKLASLTPGFSGADVANVCNEAALIA 531

to top

>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog|
          Length = 792

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -2

Query: 558 DIDLSALAKYTQGFSGADITEICQRACKYA 469
           D+D+  LA  T+ FSGA+I  + + A  +A
Sbjct: 474 DVDMEELASLTKNFSGAEIAGLIKSASSFA 503


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,166,624
Number of Sequences: 219361
Number of extensions: 893866
Number of successful extensions: 2496
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 2387
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2480
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4643056080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result