| Clone Name | rbags16c04 |
|---|---|
| Clone Library Name | barley_pub |
>VSPA_SOYBN (P15490) Stem 28 kDa glycoprotein precursor (Vegetative storage| protein A) Length = 254 Score = 127 bits (319), Expect = 3e-29 Identities = 67/126 (53%), Positives = 88/126 (69%), Gaps = 3/126 (2%) Frame = -3 Query: 606 YNXTSFDAYVLKGSAPALPETKRLXYKLLKVGIKPVFITGRTEDKRAVTVGNLRSQGFSG 427 +N T +D +V KG+APALPET + KL+ +G K +F++GRT DK+AVT NL+ G+ Sbjct: 128 FNSTLYDEWVNKGNAPALPETLKNYNKLVSLGFKIIFLSGRTLDKQAVTEANLKKAGYHT 187 Query: 426 WMNLTLK--QHGFKGSAISYKSAERKKLQDAGYVIVGNIGDQWSDILGAPEG-ARTFKLP 256 W L LK Q +A+SYK+A R+KL GY IVG IGDQWSD+LG G +RTFKLP Sbjct: 188 WEKLILKDPQDPSTPNAVSYKTAAREKLIRQGYNIVGIIGDQWSDLLGGHRGESRTFKLP 247 Query: 255 DPIYYI 238 +P+YYI Sbjct: 248 NPLYYI 253
>VSPB_SOYBN (P10743) Stem 31 kDa glycoprotein precursor (Vegetative storage| protein B) Length = 254 Score = 125 bits (314), Expect = 1e-28 Identities = 69/125 (55%), Positives = 84/125 (67%), Gaps = 2/125 (1%) Frame = -3 Query: 606 YNXTSFDAYVLKGSAPALPETKRLXYKLLKVGIKPVFITGRTEDKRAVTVGNLRSQGFSG 427 +N T +D +V KG APALPET + KLL +G K VF++GR DK AVT NL+ GF Sbjct: 129 FNETLYDEWVNKGDAPALPETLKNYNKLLSLGFKIVFLSGRYLDKMAVTEANLKKAGFHT 188 Query: 426 WMNLTLKQ-HGFKGSAISYKSAERKKLQDAGYVIVGNIGDQWSDILGAPEG-ARTFKLPD 253 W L LK H +A+SYKSA R+ L GY IVG IGDQWSD+LG G +RTFKLP+ Sbjct: 189 WEQLILKDPHLITPNALSYKSAMRENLLRQGYRIVGIIGDQWSDLLGDHRGESRTFKLPN 248 Query: 252 PIYYI 238 P+YYI Sbjct: 249 PMYYI 253
>S25K_SOYBN (P10742) Stem 31 kDa glycoprotein precursor (Vegetative storage| protein VSP25) (Fragment) Length = 291 Score = 119 bits (299), Expect = 5e-27 Identities = 64/122 (52%), Positives = 84/122 (68%), Gaps = 3/122 (2%) Frame = -3 Query: 606 YNXTSFDAYVLKGSAPALPETKRLXYKLLKVGIKPVFITGRTEDKRAVTVGNLRSQGFSG 427 +N T +D +V KG+APALPET + KL+ +G K +F++GRT DK+AVT NL+ G+ Sbjct: 125 FNSTLYDEWVNKGNAPALPETLKNYNKLVSLGFKIIFLSGRTLDKQAVTEANLKKAGYHT 184 Query: 426 WMNLTLK--QHGFKGSAISYKSAERKKLQDAGYVIVGNIGDQWSDILGAPEG-ARTFKLP 256 W L LK Q +A+SYK+A R+KL GY IVG IGDQWSD+LG G +RTFKLP Sbjct: 185 WEKLILKDPQDPSTPNAVSYKTAAREKLIRQGYNIVGIIGDQWSDLLGGHRGESRTFKLP 244 Query: 255 DP 250 +P Sbjct: 245 NP 246
>PPA1_LYCES (P27061) Acid phosphatase 1 precursor (EC 3.1.3.2) (Apase-1(1))| Length = 255 Score = 110 bits (275), Expect = 3e-24 Identities = 56/124 (45%), Positives = 80/124 (64%), Gaps = 1/124 (0%) Frame = -3 Query: 606 YNXTSFDAYVLKGSAPALPETKRLXYKLLKVGIKPVFITGRTEDKRAVTVGNLRSQGFSG 427 ++ FD +V G+APAL + +L ++LK+G K +TGR+E R+VTV NL + GF Sbjct: 131 FDDVEFDKWVENGTAPALGSSLKLYQEVLKLGFKVFLLTGRSERHRSVTVENLMNAGFHD 190 Query: 426 WMNLTLKQHGFKG-SAISYKSAERKKLQDAGYVIVGNIGDQWSDILGAPEGARTFKLPDP 250 W L L+ G +A +YKS R + + G+ IVGN GDQWSD+LG+ R+FKLP+P Sbjct: 191 WHKLILRGSDDHGKTATTYKSERRNAMVEEGFRIVGNSGDQWSDLLGSSMSYRSFKLPNP 250 Query: 249 IYYI 238 +YYI Sbjct: 251 MYYI 254
>VSP1_ARATH (O49195) Vegetative storage protein 1 precursor| Length = 270 Score = 100 bits (250), Expect = 3e-21 Identities = 50/110 (45%), Positives = 71/110 (64%) Frame = -3 Query: 567 SAPALPETKRLXYKLLKVGIKPVFITGRTEDKRAVTVGNLRSQGFSGWMNLTLKQHGFKG 388 S P LPET L LL++GI+P+ I+ R + +T+ NL++ G + W +L LK +G K Sbjct: 160 STPGLPETLHLYENLLELGIEPIIISDRWKKLSEITIENLKAVGVTKWKHLILKPNGSKL 219 Query: 387 SAISYKSAERKKLQDAGYVIVGNIGDQWSDILGAPEGARTFKLPDPIYYI 238 + + YKS R L GY IVGNIGDQW+D++ G R FKLP+P+YY+ Sbjct: 220 TQVVYKSKVRNSLVKKGYNIVGNIGDQWADLVEDTPG-RVFKLPNPLYYV 268
>VSP2_ARATH (O82122) Vegetative storage protein 2 precursor| Length = 265 Score = 94.7 bits (234), Expect = 2e-19 Identities = 47/110 (42%), Positives = 69/110 (62%) Frame = -3 Query: 567 SAPALPETKRLXYKLLKVGIKPVFITGRTEDKRAVTVGNLRSQGFSGWMNLTLKQHGFKG 388 S P LPE L ++++GI+P+ ++ R + + VT+ NL + G + W +L LK +G Sbjct: 155 STPGLPEALHLYQNIIELGIEPIILSDRWKLWKNVTLDNLEAAGVTYWKHLILKPNGSNL 214 Query: 387 SAISYKSAERKKLQDAGYVIVGNIGDQWSDILGAPEGARTFKLPDPIYYI 238 + YKS RK L GY IVGNIGDQW+D++ G R FKLP+P+YY+ Sbjct: 215 RQVVYKSKVRKSLVKKGYNIVGNIGDQWADLVEDTPG-RVFKLPNPLYYV 263
>AAD6_YEAST (P43547) Putative aryl-alcohol dehydrogenase AAD6 (EC 1.1.1.-)| Length = 212 Score = 30.8 bits (68), Expect = 3.2 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = -3 Query: 321 NIGDQWSDILGAPEGARTFKLPDPIY 244 +IGD WS+ILG+ R F+L D Y Sbjct: 38 SIGDAWSEILGSMSKERAFELLDAFY 63
>SLT11_YEAST (P38241) Pre-mRNA-splicing factor SLT11 (Synthetic lethality with| U2 protein 11) (Extracellular matrix protein 2) Length = 364 Score = 29.6 bits (65), Expect = 7.2 Identities = 14/45 (31%), Positives = 24/45 (53%) Frame = +1 Query: 106 QWIITDASSMQITITPWSIKRAWSLIIIRGARAWGNQMAAADLGD 240 +W ITD S + I W + SLI+ A+ G + +++LG+ Sbjct: 216 EWKITDTVSQLLGIKKWKDGNSLSLIVNHKAKCGGLRFQSSELGE 260
>YIEC_ECOLI (P26218) Putative outer membrane protein yieC precursor| Length = 538 Score = 29.3 bits (64), Expect = 9.4 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Frame = -3 Query: 459 VGNLRSQG--FSGWMNLTLKQHGFKGSAISYKSAERKKLQDAGYVIVGNIGDQWS 301 +G+L G +SGW +L LKQ + E K DA ++ GN+G Q+S Sbjct: 148 IGSLGRFGNEYSGWFDLQLKQRVYN---------ENGKRVDAVVMMDGNVGQQYS 193
>NFASC_CHICK (O42414) Neurofascin precursor| Length = 1369 Score = 29.3 bits (64), Expect = 9.4 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%) Frame = +1 Query: 19 MQQVNNSLPGLPKEKQQHSGLSSR-QKNKTQWIITDASSMQITITPWSIKRAW 174 + V +SLP +P E+ Q SG Q T ++M+IT TP + +A+ Sbjct: 720 VNDVGSSLPSMPSERYQTSGARPEINPTGVQGAGTQKNNMEITWTPLNATQAY 772 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,049,860 Number of Sequences: 219361 Number of extensions: 1413412 Number of successful extensions: 4526 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 4327 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4517 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5424720305 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)