| Clone Name | rbags16c03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC010342.5|AC010342 Homo sapiens chromosome 5 clone CTD-2015B23, complete sequence Length = 126010 Score = 42.1 bits (21), Expect = 0.27 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 caaactaccttattacaaata 47 ||||||||||||||||||||| Sbjct: 45639 caaactaccttattacaaata 45659
>gb|AC161399.2| Medicago truncatula chromosome 2 BAC clone mte1-30k4, complete sequence Length = 172016 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 28 aaactaccttattacaaat 46 ||||||||||||||||||| Sbjct: 56708 aaactaccttattacaaat 56726
>emb|AL731614.4|OSJN00260 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079F16, complete sequence Length = 157801 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 33 accttattacaaatacaat 51 ||||||||||||||||||| Sbjct: 105141 accttattacaaatacaat 105123
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 33 accttattacaaatacaat 51 ||||||||||||||||||| Sbjct: 11936546 accttattacaaatacaat 11936528
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 33 accttattacaaatacaat 51 ||||||||||||||||||| Sbjct: 3602998 accttattacaaatacaat 3603016
>gb|AC092839.4| Homo sapiens BAC clone RP11-257N16 from 2, complete sequence Length = 186464 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 caaactaccttattacaaa 45 ||||||||||||||||||| Sbjct: 64792 caaactaccttattacaaa 64810
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Plus Query: 33 accttattacaaatacaat 51 ||||||||||||||||||| Sbjct: 3602943 accttattacaaatacaat 3602961
>emb|AL731761.3|CNS07YPV Oryza sativa chromosome 12, . BAC OJ1119_B11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 122128 Score = 38.2 bits (19), Expect = 4.1 Identities = 19/19 (100%) Strand = Plus / Minus Query: 33 accttattacaaatacaat 51 ||||||||||||||||||| Sbjct: 86430 accttattacaaatacaat 86412 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 439,668 Number of Sequences: 3902068 Number of extensions: 439668 Number of successful extensions: 25434 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 25405 Number of HSP's gapped (non-prelim): 29 length of query: 95 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 74 effective length of database: 17,151,101,840 effective search space: 1269181536160 effective search space used: 1269181536160 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)