| Clone Name | rbags15n03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC020631.20| Homo sapiens 3 BAC RP11-308C15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 32634 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 157 ttgttaacattatcatgcaactcatt 182 ||||||||||||| |||||||||||| Sbjct: 9457 ttgttaacattataatgcaactcatt 9432
>gb|AC018489.7| Drosophila melanogaster clone BACR19G19, complete sequence Length = 179077 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 357 gtcattcttgtccttcttgga 377 ||||||||||||||||||||| Sbjct: 14342 gtcattcttgtccttcttgga 14362
>gb|AC010922.10| Drosophila melanogaster clone BACR09H01, complete sequence Length = 152607 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 357 gtcattcttgtccttcttgga 377 ||||||||||||||||||||| Sbjct: 111883 gtcattcttgtccttcttgga 111903
>gb|AY094969.1| Drosophila melanogaster SD08167 full insert cDNA Length = 4692 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 gtcattcttgtccttcttgga 377 ||||||||||||||||||||| Sbjct: 3875 gtcattcttgtccttcttgga 3855
>ref|NM_132955.1| Drosophila melanogaster RhoGAP15B CG4937-RA (RhoGAP15B), mRNA Length = 4673 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 gtcattcttgtccttcttgga 377 ||||||||||||||||||||| Sbjct: 3875 gtcattcttgtccttcttgga 3855
>gb|AE003504.4| Drosophila melanogaster chromosome X, section 56 of 74 of the complete sequence Length = 298703 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 357 gtcattcttgtccttcttgga 377 ||||||||||||||||||||| Sbjct: 17296 gtcattcttgtccttcttgga 17276
>ref|XM_415685.1| PREDICTED: Gallus gallus similar to regulator of G protein signaling RGS9-1 (LOC417433), mRNA Length = 5166 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 gcttcttcctcctgctgcct 269 |||||||||||||||||||| Sbjct: 2195 gcttcttcctcctgctgcct 2176
>gb|AC110496.12| Mus musculus chromosome 7, clone RP23-56P3, complete sequence Length = 170784 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 tcctcctgctgcctacagagcaaa 279 |||||||||||||| ||||||||| Sbjct: 130655 tcctcctgctgccttcagagcaaa 130678
>ref|XM_734201.1| Plasmodium chabaudi chabaudi hypothetical protein (PC106530.00.0) partial mRNA Length = 1323 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 gcaacggaatattacaaaaa 58 |||||||||||||||||||| Sbjct: 726 gcaacggaatattacaaaaa 745
>emb|CR450809.6| Zebrafish DNA sequence from clone CH211-195I6 in linkage group 2, complete sequence Length = 206746 Score = 40.1 bits (20), Expect = 5.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 108 acattgcctcatttctgaacaaggacaa 135 |||||||||||||| ||||||| ||||| Sbjct: 118420 acattgcctcatttttgaacaatgacaa 118393
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 gcccggcgtcattcttgtcc 369 |||||||||||||||||||| Sbjct: 4265578 gcccggcgtcattcttgtcc 4265559
>emb|BX005065.10| Zebrafish DNA sequence from clone CH211-163B2 in linkage group 8, complete sequence Length = 175016 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 taggattaactagttaaact 102 |||||||||||||||||||| Sbjct: 6968 taggattaactagttaaact 6987
>emb|AL935306.6| Zebrafish DNA sequence from clone DKEY-65O9, complete sequence Length = 207183 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 acaaaactctgaatgcatga 151 |||||||||||||||||||| Sbjct: 111578 acaaaactctgaatgcatga 111559
>gb|AC101855.14| Mus musculus chromosome 1, clone RP23-301D16, complete sequence Length = 170913 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 244 tgtggagcttcttcctcctg 263 |||||||||||||||||||| Sbjct: 141413 tgtggagcttcttcctcctg 141394
>emb|CT010492.15| Mouse DNA sequence from clone RP23-337A21 on chromosome 13, complete sequence Length = 11816 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 tggagcttcttcctcctgct 265 |||||||||||||||||||| Sbjct: 5545 tggagcttcttcctcctgct 5526
>emb|CR388379.15| Zebrafish DNA sequence from clone CH211-129O15, complete sequence Length = 149807 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 acaaaactctgaatgcatga 151 |||||||||||||||||||| Sbjct: 42143 acaaaactctgaatgcatga 42162
>gb|M65866.1|DHVPB1 Tick-borne Dhori virus segment 2-encoded PB1 polymerase gene, complete cds Length = 2224 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 265 tgcctacagagcaaaaacgg 284 |||||||||||||||||||| Sbjct: 2129 tgcctacagagcaaaaacgg 2148
>dbj|AB028020.1| Fusarium oxysporum SAP1 gene for aspartic proteinase, complete cds Length = 1714 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 cttcttcttctgcccggcgt 358 |||||||||||||||||||| Sbjct: 1176 cttcttcttctgcccggcgt 1195 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,465,799 Number of Sequences: 3902068 Number of extensions: 4465799 Number of successful extensions: 80466 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 18 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 80433 Number of HSP's gapped (non-prelim): 33 length of query: 409 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 387 effective length of database: 17,147,199,772 effective search space: 6635966311764 effective search space used: 6635966311764 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)