| Clone Name | rbags15n01 |
|---|---|
| Clone Library Name | barley_pub |
>JI23_HORVU (P32024) 23 kDa jasmonate-induced protein| Length = 210 Score = 256 bits (653), Expect(2) = 6e-74 Identities = 116/170 (68%), Positives = 138/170 (81%), Gaps = 2/170 (1%) Frame = -2 Query: 609 GARILTHKQFVDNLKIKYGNGISVKCLIYNATGTNLSFVTYKNWIGSIFDTPYPSDIQNG 430 G + + ++FVDNLK +YGNGI+VKCL+YNATG L+F Y +W G I+DTPYPSDIQNG Sbjct: 41 GGKDVNAQKFVDNLKERYGNGIAVKCLLYNATGATLNFAKYNDWHGHIYDTPYPSDIQNG 100 Query: 429 QWGAFLHVKPRAAAKGSTAAVVYRSRIPXXXXSCDWLFTWSVPFIGNNGVYTEIREQGHF 250 QWGAFLHV P AA GS AVVYRS+IP SCDWLF+W+VP+IG NGVYTEIRE+GH+ Sbjct: 101 QWGAFLHVHPSGAAAGSAGAVVYRSKIPSSSSSCDWLFSWTVPYIGGNGVYTEIREEGHY 160 Query: 249 PK--HWDYIYNVRLANSNLHSTDSNYGYVSRANIGEGTTMNARAVFQLPY 106 P WDYIYNV+L NS++ S DSNYGYVS+A+IGEGTTMNAR VF+ PY Sbjct: 161 PSVGSWDYIYNVKLKNSSVTSIDSNYGYVSKADIGEGTTMNARGVFEFPY 210 Score = 42.0 bits (97), Expect(2) = 6e-74 Identities = 18/21 (85%), Positives = 20/21 (95%) Frame = -1 Query: 649 KDVADYTMKMINAGGKDIDAQ 587 KDVADY MKMINAGGKD++AQ Sbjct: 28 KDVADYAMKMINAGGKDVNAQ 48
>JIPH_ATRCA (P42764) Jasmonate-induced protein homolog| Length = 185 Score = 47.0 bits (110), Expect = 5e-05 Identities = 45/150 (30%), Positives = 60/150 (40%), Gaps = 15/150 (10%) Frame = -2 Query: 588 KQFVDNLKIKYGN-GISVKCL------IYNATGTNLSFVTYKNWIGSIFDTPYPSDIQNG 430 K+ VD + K N G++V+ + N T +++F NW GS+ T YP I Sbjct: 14 KKSVDEMVEKATNMGVNVQAQNSAVVSMINQTNVSMTFNENHNWSGSVVGTGYPKSIPTK 73 Query: 429 QWGAFLHVKPRAAAKGSTAAVVYRSRIPXXXXSCDWLFTWSVPF----IGNNGVYTEIRE 262 Q F+H A GS AVVY C WL W P N VY + Sbjct: 74 QSRQFIH--QGDAKDGSQGAVVYYGS-NANGEPCGWLLAWCAPTNVTPTKPNRVYVDCGA 130 Query: 261 QGHFPK-HWDYI---YNVRLANSNLHSTDS 184 Q F WD I +V A +N D+ Sbjct: 131 QSKFDTISWDTIKAKLDVGPATTNFTDVDT 160
>JHD1B_XENLA (Q640I9) JmjC domain-containing histone demethylation protein 1B (EC| 1.14.11.-) (F-box/LRR-repeat protein 10) (F-box and leucine-rich repeat protein 10) Length = 1259 Score = 31.6 bits (70), Expect = 2.1 Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 11/81 (13%) Frame = +1 Query: 394 CSWFDVEK-----CPPLSILNIRWVGCIKDTANPILVRDETQIGTGSIVDEAFYRYSITV 558 CSW V CP L LN++WV +KD L+ T G I + + R +IT Sbjct: 1082 CSWIAVSALCSSCCPLLRTLNVQWVEGLKDAQMRDLLSPPTDNRPGQIDNRSKLR-NITE 1140 Query: 559 LDLQVVD------ELFVRQYP 603 L L +D L +R P Sbjct: 1141 LRLAGLDITDASLRLMIRHMP 1161
>IL4RA_HORSE (Q6WG24) Interleukin-4 receptor alpha chain precursor (IL-4R-alpha)| (CD124 antigen) Length = 809 Score = 31.2 bits (69), Expect = 2.8 Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 4/80 (5%) Frame = -2 Query: 411 HVKPRAAAKGSTAAVVYRSRIPXXXXSCDWLFTWSVPFIGNNGVYTEIREQGHFPKHWD- 235 HVKPRA + A+ + WL TWS P+ N +++E+ + K D Sbjct: 120 HVKPRAPQNLTVHAISHT-----------WLLTWSNPYPLKNHLWSELTYLVNISKEDDP 168 Query: 234 ---YIYNVRLANSNLHSTDS 184 IYNV + L T S Sbjct: 169 TDFKIYNVTYMDPTLRVTAS 188
>YP158_YEAST (Q99299) Protein YPL158C| Length = 758 Score = 30.8 bits (68), Expect = 3.6 Identities = 22/60 (36%), Positives = 30/60 (50%) Frame = -2 Query: 300 FIGNNGVYTEIREQGHFPKHWDYIYNVRLANSNLHSTDSNYGYVSRANIGEGTTMNARAV 121 F NGV + E G+ DY +N+N +S S+ GY S ANI + TT + R V Sbjct: 49 FAAENGVSRD--EDGNSQTLSDY---TSTSNTNTNSGYSSNGYYSFANISDNTTSSPRIV 103
>DYHA_CHLRE (Q39610) Dynein alpha chain, flagellar outer arm (DHC alpha)| Length = 4499 Score = 30.0 bits (66), Expect = 6.2 Identities = 12/35 (34%), Positives = 18/35 (51%) Frame = +1 Query: 400 WFDVEKCPPLSILNIRWVGCIKDTANPILVRDETQ 504 WFD K P +I N ++V C+ TA ++ Q Sbjct: 2464 WFDRAKLTPKNINNTQYVACMNPTAGSFIINPRLQ 2498
>CARA_ACIAD (Q6F8M7) Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase glutamine chain) Length = 379 Score = 30.0 bits (66), Expect = 6.2 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Frame = -2 Query: 321 LFTWSVPFIGNNGVYTEIREQGHFPKHWD---YIYNVRLANSNLHSTDSNYGYVSRANI 154 L T + P IGN G E E G K W I ++ L +SN S S Y+ + N+ Sbjct: 52 LVTLTYPHIGNTGCNEEDTESGRIHKVWANGLIIRDLPLLHSNFRSEQSLAEYLIQHNV 110 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 100,566,922 Number of Sequences: 219361 Number of extensions: 2185980 Number of successful extensions: 5148 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 5001 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5147 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6086476506 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)