ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags16b23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478259.1| Oryza sativa (japonica cultivar-group), mRNA 248 2e-62
2dbj|AK102299.1| Oryza sativa (japonica cultivar-group) cDNA clon... 248 2e-62
3gb|AY109766.1| Zea mays CL1208_1 mRNA sequence 224 3e-55
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 133 7e-28
5dbj|AP003995.2| Oryza sativa (japonica cultivar-group) genomic D... 133 7e-28
6emb|AL139140.11| Human DNA sequence from clone RP5-1071P19 on ch... 44 0.52
7gb|AC126013.12| Medicago truncatula clone mth2-32e10, complete s... 42 2.1
8gb|AF016665.1| Caenorhabditis elegans cosmid C49D10, complete se... 40 8.2
9gb|AC124377.4| Mus musculus BAC clone RP24-396N12 from chromosom... 40 8.2
10gb|AC112686.10| Mus musculus chromosome 6, clone RP23-354N21, co... 40 8.2
11gb|AC123822.4| Mus musculus BAC clone RP23-477F12 from chromosom... 40 8.2
12gb|AC122225.4| Mus musculus BAC clone RP23-131E21 from 9, comple... 40 8.2
13gb|AC122822.3| Mus musculus BAC clone RP23-202A13 from 9, comple... 40 8.2
14gb|AC122187.3| Mus musculus BAC clone RP23-21P2 from 1, complete... 40 8.2
15emb|AL512343.21| Human DNA sequence from clone RP11-396C23 on ch... 40 8.2
16emb|AL158077.15| Human DNA sequence from clone RP11-471J7 on chr... 40 8.2
17gb|AC103951.7| Homo sapiens chromosome 18, clone RP11-117L4, com... 40 8.2
18gb|AC091138.6| Homo sapiens chromosome 18, clone RP11-676J15, co... 40 8.2
19gb|AC061961.6| Homo sapiens chromosome 2, clone RP11-754B23, com... 40 8.2
20ref|NM_062278.2| Caenorhabditis elegans C49D10.10 (protease) mRN... 40 8.2
21gb|AC154296.2| Mus musculus BAC clone RP23-424C4 from chromosome... 40 8.2
22gb|AC154825.2| Mus musculus BAC clone RP24-540E16 from chromosom... 40 8.2
23gb|AC127330.4| Mus musculus BAC clone RP23-126N22 from 6, comple... 40 8.2
24emb|BX539316.6| Mouse DNA sequence from clone RP24-216F23 on chr... 40 8.2
25emb|BX539309.5| Mouse DNA sequence from clone RP23-475N16 on chr... 40 8.2
26gb|AC148327.3| Mus musculus BAC clone RP24-322E6 from 5, complet... 40 8.2
27gb|AC140308.2| Mus musculus BAC clone RP23-424G15 from 1, comple... 40 8.2
28emb|CT025937.9| Mouse DNA sequence from clone RP24-264F1 on chro... 40 8.2
29emb|AL772231.8| Mouse DNA sequence from clone RP23-398O7 on chro... 40 8.2
30gb|AC154029.4| Mus musculus 6 BAC RP23-26J14 (Roswell Park Cance... 40 8.2
31gb|AC156500.2| Mus musculus BAC clone RP24-126J12 from chromosom... 40 8.2 
>ref|XM_478259.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2449

 Score =  248 bits (125), Expect = 2e-62
 Identities = 287/340 (84%), Gaps = 1/340 (0%)
 Strand = Plus / Minus

                                                                        
Query: 261  aagcaaatgtggcgagctttcattgttgccaccccgtgggctttcatgcgggcggtggtg 320
            |||||||||||| | |||||||| |||||| | ||| | ||||||||| |||||||| ||
Sbjct: 2028 aagcaaatgtggagtgctttcatcgttgccgctccgagagctttcatgtgggcggtgatg 1969

                                                                        
Query: 321  cttgcccatttgcacatcccgtgtaaactgggtccttgatttagcatagggagcttccct 380
            |||  |||||||||  ||||||||||| || || |  || || ||||| |||||||||||
Sbjct: 1968 cttcgccatttgcatgtcccgtgtaaattgtgttcgagactttgcataaggagcttccct 1909

                                                                        
Query: 381  tgctgcagctaatttctgaccacggataatgntttgcctccttttccaccagcatgccga 440
            ||||||||||||||||||  |||||  |||| | || || || |||||||||||||||| 
Sbjct: 1908 tgctgcagctaatttctgcgcacggcgaatgttctgtcttctcttccaccagcatgccgc 1849

                                                                        
Query: 441  aaatacaactagaaacagaaaagctacaagtaccccgaaagccatgccgatttttgcagc 500
            ||||||||||||||| || | |||||| |||||||| |||||||| || || ||||||||
Sbjct: 1848 aaatacaactagaaataggatagctaccagtaccccaaaagccataccaatctttgcagc 1789

                                                                        
Query: 501  tacagataaatgagggccacacctcacgtaaaccaggaattccacacagcctagcattgt 560
             ||||||||||| ||||| ||  ||| ||||||| ||||||||||| || | ||||||||
Sbjct: 1788 cacagataaatgcgggccgca-ttcatgtaaaccgggaattccacaaagtccagcattgt 1730

                                                    
Query: 561  ccgtaaagttgaatctaactctgtgtaaaggtcttcctcc 600
            |||| ||||| |||||| ||||||||| ||||||||||||
Sbjct: 1729 ccgtgaagttaaatctagctctgtgtagaggtcttcctcc 1690



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 61/71 (85%), Gaps = 2/71 (2%)
 Strand = Plus / Minus

                                                                        
Query: 140  tatacaccatcc-tgacctagtatgtataa-ttgttttacaactcaagctgacaccagca 197
            |||||||||| | |||||||||||||| || ||||||| |||||||| |||| | ||| |
Sbjct: 2137 tatacaccatacatgacctagtatgtacaatttgttttgcaactcaacctgatagcagaa 2078

                       
Query: 198  ttaactgagca 208
            | |||||||||
Sbjct: 2077 tcaactgagca 2067
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>dbj|AK102299.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089L20, full
            insert sequence
          Length = 2450

 Score =  248 bits (125), Expect = 2e-62
 Identities = 287/340 (84%), Gaps = 1/340 (0%)
 Strand = Plus / Minus

                                                                        
Query: 261  aagcaaatgtggcgagctttcattgttgccaccccgtgggctttcatgcgggcggtggtg 320
            |||||||||||| | |||||||| |||||| | ||| | ||||||||| |||||||| ||
Sbjct: 2028 aagcaaatgtggagtgctttcatcgttgccgctccgagagctttcatgtgggcggtgatg 1969

                                                                        
Query: 321  cttgcccatttgcacatcccgtgtaaactgggtccttgatttagcatagggagcttccct 380
            |||  |||||||||  ||||||||||| || || |  || || ||||| |||||||||||
Sbjct: 1968 cttcgccatttgcatgtcccgtgtaaattgtgttcgagactttgcataaggagcttccct 1909

                                                                        
Query: 381  tgctgcagctaatttctgaccacggataatgntttgcctccttttccaccagcatgccga 440
            ||||||||||||||||||  |||||  |||| | || || || |||||||||||||||| 
Sbjct: 1908 tgctgcagctaatttctgcgcacggcgaatgttctgtcttctcttccaccagcatgccgc 1849

                                                                        
Query: 441  aaatacaactagaaacagaaaagctacaagtaccccgaaagccatgccgatttttgcagc 500
            ||||||||||||||| || | |||||| |||||||| |||||||| || || ||||||||
Sbjct: 1848 aaatacaactagaaataggatagctaccagtaccccaaaagccataccaatctttgcagc 1789

                                                                        
Query: 501  tacagataaatgagggccacacctcacgtaaaccaggaattccacacagcctagcattgt 560
             ||||||||||| ||||| ||  ||| ||||||| ||||||||||| || | ||||||||
Sbjct: 1788 cacagataaatgcgggccgca-ttcatgtaaaccgggaattccacaaagtccagcattgt 1730

                                                    
Query: 561  ccgtaaagttgaatctaactctgtgtaaaggtcttcctcc 600
            |||| ||||| |||||| ||||||||| ||||||||||||
Sbjct: 1729 ccgtgaagttaaatctagctctgtgtagaggtcttcctcc 1690



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 61/71 (85%), Gaps = 2/71 (2%)
 Strand = Plus / Minus

                                                                        
Query: 140  tatacaccatcc-tgacctagtatgtataa-ttgttttacaactcaagctgacaccagca 197
            |||||||||| | |||||||||||||| || ||||||| |||||||| |||| | ||| |
Sbjct: 2137 tatacaccatacatgacctagtatgtacaatttgttttgcaactcaacctgatagcagaa 2078

                       
Query: 198  ttaactgagca 208
            | |||||||||
Sbjct: 2077 tcaactgagca 2067
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>gb|AY109766.1| Zea mays CL1208_1 mRNA sequence
          Length = 3968

 Score =  224 bits (113), Expect = 3e-55
 Identities = 290/348 (83%), Gaps = 1/348 (0%)
 Strand = Plus / Plus

                                                                       
Query: 255 ctaggaaagcaaatgtggcgagctttcattgttgccaccccgtgggctttcatgcgggcg 314
           ||||||||||||||||||||||| |||| ||||||  | ||| |   ||||||| |  ||
Sbjct: 201 ctaggaaagcaaatgtggcgagccttcactgttgctgctccgagcattttcatgtgtccg 260

                                                                       
Query: 315 gtggtgcttgcccatttgcacatcccgtgtaaactgggtccttgatttagcatagggagc 374
            || |||||| ||||||||||||| || || ||||||||||||||||| ||||| |||||
Sbjct: 261 ttgatgcttggccatttgcacatcgcgggtgaactgggtccttgattttgcataaggagc 320

                                                                       
Query: 375 ttcccttgctgcagctaatttctgaccacggataatgntttgcctccttttccaccagca 434
           ||||||||||||||||||| | | | |||||| |||| | || |  || |||||||||||
Sbjct: 321 ttcccttgctgcagctaatcttttagcacggagaatgttctggcgtctcttccaccagca 380

                                                                       
Query: 435 tgccgaaaatacaactagaaacagaaaagctacaagtaccccgaaagccatgccgatttt 494
            || |  ||||||||||| || |||| ||||| ||| || ||||||||||||||||| ||
Sbjct: 381 cgcagcgaatacaactaggaatagaatagctaaaagcacgccgaaagccatgccgatctt 440

                                                                       
Query: 495 tgcagctacagataaatgagggccacacctcacgtaaaccaggaattccacacagcctag 554
           |||||| || |||| |||||||||||| ||||||||| ||||| |||||||| || |  |
Sbjct: 441 tgcagccacggatagatgagggccaca-ctcacgtaacccaggtattccacatagtccgg 499

                                                           
Query: 555 cattgtccgtaaagttgaatctaactctgtgtaaaggtcttcctccca 602
           |||||||||| ||||| |||||| ||||||| | ||| ||||||||||
Sbjct: 500 cattgtccgtgaagttaaatctagctctgtgcagaggccttcctccca 547
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  133 bits (67), Expect = 7e-28
 Identities = 154/182 (84%), Gaps = 1/182 (0%)
 Strand = Plus / Plus

                                                                            
Query: 383      ctgcagctaatttctgaccacggataatgntttgcctccttttccaccagcatgccgaaa 442
                ||||||||||||||||  |||||  |||| | || || || |||||||||||||||| ||
Sbjct: 18862017 ctgcagctaatttctgcgcacggcgaatgttctgtcttctcttccaccagcatgccgcaa 18862076

                                                                            
Query: 443      atacaactagaaacagaaaagctacaagtaccccgaaagccatgccgatttttgcagcta 502
                ||||||||||||| || | |||||| |||||||| |||||||| || || |||||||| |
Sbjct: 18862077 atacaactagaaataggatagctaccagtaccccaaaagccataccaatctttgcagcca 18862136

                                                                            
Query: 503      cagataaatgagggccacacctcacgtaaaccaggaattccacacagcctagcattgtcc 562
                |||||||||| ||||| ||  ||| ||||||| ||||||||||| || | ||||||||||
Sbjct: 18862137 cagataaatgcgggccgca-ttcatgtaaaccgggaattccacaaagtccagcattgtcc 18862195

                  
Query: 563      gt 564
                ||
Sbjct: 18862196 gt 18862197



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 107/128 (83%)
 Strand = Plus / Plus

                                                                            
Query: 261      aagcaaatgtggcgagctttcattgttgccaccccgtgggctttcatgcgggcggtggtg 320
                |||||||||||| | |||||||| |||||| | ||| | ||||||||| |||||||| ||
Sbjct: 18861796 aagcaaatgtggagtgctttcatcgttgccgctccgagagctttcatgtgggcggtgatg 18861855

                                                                            
Query: 321      cttgcccatttgcacatcccgtgtaaactgggtccttgatttagcatagggagcttccct 380
                |||  |||||||||  ||||||||||| || || |  || || ||||| |||||||||||
Sbjct: 18861856 cttcgccatttgcatgtcccgtgtaaattgtgttcgagactttgcataaggagcttccct 18861915

                        
Query: 381      tgctgcag 388
                ||||||||
Sbjct: 18861916 tgctgcag 18861923



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 61/71 (85%), Gaps = 2/71 (2%)
 Strand = Plus / Plus

                                                                            
Query: 140      tatacaccatcc-tgacctagtatgtataa-ttgttttacaactcaagctgacaccagca 197
                |||||||||| | |||||||||||||| || ||||||| |||||||| |||| | ||| |
Sbjct: 18861687 tatacaccatacatgacctagtatgtacaatttgttttgcaactcaacctgatagcagaa 18861746

                           
Query: 198      ttaactgagca 208
                | |||||||||
Sbjct: 18861747 tcaactgagca 18861757



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 572      aatctaactctgtgtaaaggtcttcctcc 600
                |||||| ||||||||| ||||||||||||
Sbjct: 18862381 aatctagctctgtgtagaggtcttcctcc 18862409
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>dbj|AP003995.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1112_F06
          Length = 104419

 Score =  133 bits (67), Expect = 7e-28
 Identities = 154/182 (84%), Gaps = 1/182 (0%)
 Strand = Plus / Plus

                                                                         
Query: 383   ctgcagctaatttctgaccacggataatgntttgcctccttttccaccagcatgccgaaa 442
             ||||||||||||||||  |||||  |||| | || || || |||||||||||||||| ||
Sbjct: 62203 ctgcagctaatttctgcgcacggcgaatgttctgtcttctcttccaccagcatgccgcaa 62262

                                                                         
Query: 443   atacaactagaaacagaaaagctacaagtaccccgaaagccatgccgatttttgcagcta 502
             ||||||||||||| || | |||||| |||||||| |||||||| || || |||||||| |
Sbjct: 62263 atacaactagaaataggatagctaccagtaccccaaaagccataccaatctttgcagcca 62322

                                                                         
Query: 503   cagataaatgagggccacacctcacgtaaaccaggaattccacacagcctagcattgtcc 562
             |||||||||| ||||| ||  ||| ||||||| ||||||||||| || | ||||||||||
Sbjct: 62323 cagataaatgcgggccgca-ttcatgtaaaccgggaattccacaaagtccagcattgtcc 62381

               
Query: 563   gt 564
             ||
Sbjct: 62382 gt 62383



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 107/128 (83%)
 Strand = Plus / Plus

                                                                         
Query: 261   aagcaaatgtggcgagctttcattgttgccaccccgtgggctttcatgcgggcggtggtg 320
             |||||||||||| | |||||||| |||||| | ||| | ||||||||| |||||||| ||
Sbjct: 61982 aagcaaatgtggagtgctttcatcgttgccgctccgagagctttcatgtgggcggtgatg 62041

                                                                         
Query: 321   cttgcccatttgcacatcccgtgtaaactgggtccttgatttagcatagggagcttccct 380
             |||  |||||||||  ||||||||||| || || |  || || ||||| |||||||||||
Sbjct: 62042 cttcgccatttgcatgtcccgtgtaaattgtgttcgagactttgcataaggagcttccct 62101

                     
Query: 381   tgctgcag 388
             ||||||||
Sbjct: 62102 tgctgcag 62109



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 61/71 (85%), Gaps = 2/71 (2%)
 Strand = Plus / Plus

                                                                         
Query: 140   tatacaccatcc-tgacctagtatgtataa-ttgttttacaactcaagctgacaccagca 197
             |||||||||| | |||||||||||||| || ||||||| |||||||| |||| | ||| |
Sbjct: 61873 tatacaccatacatgacctagtatgtacaatttgttttgcaactcaacctgatagcagaa 61932

                        
Query: 198   ttaactgagca 208
             | |||||||||
Sbjct: 61933 tcaactgagca 61943



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 572   aatctaactctgtgtaaaggtcttcctcc 600
             |||||| ||||||||| ||||||||||||
Sbjct: 62567 aatctagctctgtgtagaggtcttcctcc 62595
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>emb|AL139140.11| Human DNA sequence from clone RP5-1071P19 on chromosome 1p34.1-34.3
             Contains part of the CSMD2 gene for CUB and Sushi multiple
             domains 2, complete sequence
          Length = 78229

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 188   gacaccagcattaactgagcat 209
             ||||||||||||||||||||||
Sbjct: 64676 gacaccagcattaactgagcat 64655
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>gb|AC126013.12| Medicago truncatula clone mth2-32e10, complete sequence
          Length = 116778

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 442   aatacaactagaaacagaaaa 462
             |||||||||||||||||||||
Sbjct: 42430 aatacaactagaaacagaaaa 42410
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>gb|AF016665.1| Caenorhabditis elegans cosmid C49D10, complete sequence
          Length = 30093

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    acgaatatgatgatccggat 84
             ||||||||||||||||||||
Sbjct: 19892 acgaatatgatgatccggat 19873
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>gb|AC124377.4| Mus musculus BAC clone RP24-396N12 from chromosome 5, complete sequence
          Length = 170401

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    ctgcatacgtaacagaagat 31
             ||||||||||||||||||||
Sbjct: 68580 ctgcatacgtaacagaagat 68599
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>gb|AC112686.10| Mus musculus chromosome 6, clone RP23-354N21, complete sequence
          Length = 222603

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    aacagaagataatgaagcta 41
             ||||||||||||||||||||
Sbjct: 43992 aacagaagataatgaagcta 43973
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>gb|AC123822.4| Mus musculus BAC clone RP23-477F12 from chromosome 7, complete sequence
          Length = 179943

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 12     ctgcatacgtaacagaagat 31
              ||||||||||||||||||||
Sbjct: 112609 ctgcatacgtaacagaagat 112628



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    ctgcatacgtaacagaagat 31
             ||||||||||||||||||||
Sbjct: 34732 ctgcatacgtaacagaagat 34751
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>gb|AC122225.4| Mus musculus BAC clone RP23-131E21 from 9, complete sequence
          Length = 209737

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 12     ctgcatacgtaacagaagat 31
              ||||||||||||||||||||
Sbjct: 114527 ctgcatacgtaacagaagat 114508
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>gb|AC122822.3| Mus musculus BAC clone RP23-202A13 from 9, complete sequence
          Length = 191414

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 12     ctgcatacgtaacagaagat 31
              ||||||||||||||||||||
Sbjct: 170143 ctgcatacgtaacagaagat 170124
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>gb|AC122187.3| Mus musculus BAC clone RP23-21P2 from 1, complete sequence
          Length = 252095

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 454    aacagaaaagctacaagtac 473
              ||||||||||||||||||||
Sbjct: 107769 aacagaaaagctacaagtac 107788
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>emb|AL512343.21| Human DNA sequence from clone RP11-396C23 on chromosome 1 Contains the
             H3F3A gene for H3 histone, family 3A, a nove gene and four
             CpG islands, complete sequence
          Length = 105087

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 440   aaaatacaactagaaacaga 459
             ||||||||||||||||||||
Sbjct: 56669 aaaatacaactagaaacaga 56688
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>emb|AL158077.15| Human DNA sequence from clone RP11-471J7 on chromosome 9 Contains the
             5' end of the SLC24A2 gene for solute carrier family 24
             (sodium/potassium/calcium exchanger), member 2 (NCKX2) and
             a CpG island, complete sequence
          Length = 159900

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 443   atacaactagaaacagaaaa 462
             ||||||||||||||||||||
Sbjct: 45653 atacaactagaaacagaaaa 45634
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>gb|AC103951.7| Homo sapiens chromosome 18, clone RP11-117L4, complete sequence
          Length = 168800

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    tagtatgtataattgtttta 176
              ||||||||||||||||||||
Sbjct: 120695 tagtatgtataattgtttta 120714
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>gb|AC091138.6| Homo sapiens chromosome 18, clone RP11-676J15, complete sequence
          Length = 207520

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 157    tagtatgtataattgtttta 176
              ||||||||||||||||||||
Sbjct: 178493 tagtatgtataattgtttta 178474
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>gb|AC061961.6| Homo sapiens chromosome 2, clone RP11-754B23, complete sequence
          Length = 91734

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 161   atgtataattgttttacaac 180
             ||||||||||||||||||||
Sbjct: 69412 atgtataattgttttacaac 69431
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>ref|NM_062278.2| Caenorhabditis elegans C49D10.10 (protease) mRNA, complete cds
          Length = 2012

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 65   acgaatatgatgatccggat 84
            ||||||||||||||||||||
Sbjct: 1648 acgaatatgatgatccggat 1667
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>gb|AC154296.2| Mus musculus BAC clone RP23-424C4 from chromosome 9, complete
            sequence
          Length = 194303

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 184  agctgacaccagcattaact 203
            ||||||||||||||||||||
Sbjct: 7355 agctgacaccagcattaact 7336
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>gb|AC154825.2| Mus musculus BAC clone RP24-540E16 from chromosome 16, complete sequence
          Length = 202988

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 12     ctgcatacgtaacagaagat 31
              ||||||||||||||||||||
Sbjct: 166930 ctgcatacgtaacagaagat 166949
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>gb|AC127330.4| Mus musculus BAC clone RP23-126N22 from 6, complete sequence
          Length = 211663

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 22   aacagaagataatgaagcta 41
            ||||||||||||||||||||
Sbjct: 7883 aacagaagataatgaagcta 7902
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>emb|BX539316.6| Mouse DNA sequence from clone RP24-216F23 on chromosome 7, complete
              sequence
          Length = 178673

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 12     ctgcatacgtaacagaagat 31
              ||||||||||||||||||||
Sbjct: 165493 ctgcatacgtaacagaagat 165474
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>emb|BX539309.5| Mouse DNA sequence from clone RP23-475N16 on chromosome 7, complete
             sequence
          Length = 82140

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    ctgcatacgtaacagaagat 31
             ||||||||||||||||||||
Sbjct: 66697 ctgcatacgtaacagaagat 66678
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>gb|AC148327.3| Mus musculus BAC clone RP24-322E6 from 5, complete sequence
          Length = 186474

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    ctgcatacgtaacagaagat 31
             ||||||||||||||||||||
Sbjct: 62549 ctgcatacgtaacagaagat 62530
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>gb|AC140308.2| Mus musculus BAC clone RP23-424G15 from 1, complete sequence
          Length = 207633

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 454    aacagaaaagctacaagtac 473
              ||||||||||||||||||||
Sbjct: 174163 aacagaaaagctacaagtac 174182
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>emb|CT025937.9| Mouse DNA sequence from clone RP24-264F1 on chromosome 16, complete
             sequence
          Length = 138912

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    ctgcatacgtaacagaagat 31
             ||||||||||||||||||||
Sbjct: 49922 ctgcatacgtaacagaagat 49903
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>emb|AL772231.8| Mouse DNA sequence from clone RP23-398O7 on chromosome 4, complete
            sequence
          Length = 153653

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 12   ctgcatacgtaacagaagat 31
            ||||||||||||||||||||
Sbjct: 6559 ctgcatacgtaacagaagat 6540
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>gb|AC154029.4| Mus musculus 6 BAC RP23-26J14 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 188537

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    ctgcatacgtaacagaagat 31
             ||||||||||||||||||||
Sbjct: 83163 ctgcatacgtaacagaagat 83182
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>gb|AC156500.2| Mus musculus BAC clone RP24-126J12 from chromosome 9, complete sequence
          Length = 152842

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   agctgacaccagcattaact 203
             ||||||||||||||||||||
Sbjct: 35205 agctgacaccagcattaact 35224


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,997,212
Number of Sequences: 3902068
Number of extensions: 4997212
Number of successful extensions: 91463
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91341
Number of HSP's gapped (non-prelim): 112
length of query: 602
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 579
effective length of database: 17,143,297,704
effective search space: 9925969370616
effective search space used: 9925969370616
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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