ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags15m19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|Z30243.1|SCCLHSP S.cereale (Halo) chloroplast mRNA for heat-... 609 e-171
2dbj|AK073817.1| Oryza sativa (japonica cultivar-group) cDNA clon... 319 6e-84
3ref|XM_483065.1| Oryza sativa (japonica cultivar-group), mRNA 232 1e-57
4dbj|AK122102.1| Oryza sativa (japonica cultivar-group) cDNA clon... 232 1e-57
5gb|AY104129.1| Zea mays PCO085355 mRNA sequence 161 3e-36
6dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 141 3e-30
7dbj|AP006169.3| Oryza sativa (japonica cultivar-group) genomic D... 141 3e-30
8gb|AY106328.1| Zea mays PCO125641 mRNA sequence 137 5e-29
9dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 107 4e-20
10dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic D... 107 4e-20
11ref|NM_179601.1| Arabidopsis thaliana CR88; ATP binding / unfold... 72 2e-09
12ref|NM_126439.2| Arabidopsis thaliana CR88; ATP binding / unfold... 72 2e-09
13gb|AY094422.1| Arabidopsis thaliana At2g04030/F3C11.14 mRNA, com... 72 2e-09
14gb|AF436826.1|AF436826 Arabidopsis thaliana At2g04030/F3C11.14 m... 72 2e-09
15gb|AY053403.1| Arabidopsis thaliana At2g04030/F3C11.14 mRNA, com... 72 2e-09
16emb|BX820811.1|CNS0A8OS Arabidopsis thaliana Full-length cDNA Co... 72 2e-09
17gb|BT002234.1| Arabidopsis thaliana At2g04030/F3C11.14 mRNA, com... 72 2e-09
18emb|Y11829.1|ATHSP881 A.thaliana hsp88.1 gene 54 6e-04
19gb|AC007167.5| Arabidopsis thaliana chromosome 2 clone F3C11 map... 54 6e-04
20emb|AJ719165.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT21-3-20... 52 0.002
21gb|BT017162.1| Zea mays clone EL01N0368C07.c mRNA sequence 48 0.035
22gb|AY107109.1| Zea mays PCO121171 mRNA sequence 48 0.035
23gb|AF500173.1| Issatchenkia orientalis heat shock protein 90 (hs... 46 0.14
24ref|XM_448795.1| Candida glabrata CBS138, CAGL0L00495g partial mRNA 44 0.54
25emb|Z67751.1|SC38KCXVI S.cerevisiae DNA (chromosome XVI; 38 kb) 44 0.54
26emb|CR380958.1| Candida glabrata strain CBS138 chromosome L comp... 44 0.54
27dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.54
28gb|AF251005.1|AF251005 Candida tropicalis heat shock protein 90 ... 44 0.54
29dbj|AK069204.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.54
30dbj|AK067032.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.54
31dbj|AK059704.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.54
32emb|Z73596.1|SCYPL240C S.cerevisiae chromosome XVI reading frame... 44 0.54
33gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.54
34emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118... 44 0.54
35gb|K01387.1|YSCHSP82A Yeast (S.cerevisiae) HSP82 (heat shock-ind... 44 0.54
36gb|AY729858.1| Pavlova lutheri heat shock protein 90 gene, parti... 42 2.1
37gb|AC159649.3| Mus musculus BAC clone RP23-46D6 from chromosome ... 42 2.1
38gb|AY641576.1| Avian infectious bronchitis virus isolate Peafowl... 40 8.4
39gb|AC183296.3| Pan troglodytes BAC clone CH251-352A17 from chrom... 40 8.4
40gb|AY514485.1| Avian infectious bronchitis virus strain Cal99, c... 40 8.4
41gb|AC116996.3| Mus musculus BAC clone RP23-6B22 from 15, complet... 40 8.4
42emb|AL049794.16|HSDJ777L9 Human DNA sequence from clone RP4-777L... 40 8.4
43gb|AC092296.2| Homo sapiens chromosome 19 clone CTD-3162L10, com... 40 8.4
44gb|AC099397.5| Homo sapiens BAC clone RP11-247K9 from 4, complet... 40 8.4
45gb|AF165818.4|AF165818 Guillardia theta nucleomorph chromosome 1... 40 8.4
46gb|AF123259.1|AF123259 Lycopersicon esculentum heat shock protei... 40 8.4
47gb|AC160934.2| Mus musculus BAC clone RP23-435H22 from chromosom... 40 8.4
48gb|J04017.1|SCMHSP86 S.mansoni heat shock protein 86 mRNA, compl... 40 8.4 
>emb|Z30243.1|SCCLHSP S.cereale (Halo) chloroplast mRNA for heat-shock protein
          Length = 2654

 Score =  609 bits (307), Expect = e-171
 Identities = 407/446 (91%), Gaps = 3/446 (0%)
 Strand = Plus / Minus

                                                                        
Query: 178  aatggatgcctacagaactaactaatctctccatgggtcattctcgttctcagtcctgac 237
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2468 aatggatgcctacagaactaactaatctctccatgggtcattctcgttctcagtcctgac 2409

                                                                        
Query: 238  ttcggatggctcaacaacctccgttacaacggcttcagaanagtc---gttgacattggt 294
            ||||||||||||||  ||||||| ||||||  |||||||| ||||   || |||||||||
Sbjct: 2408 ttcggatggctcaatgacctccggtacaacaccttcagaagagtcaccgtcgacattggt 2349

                                                                        
Query: 295  ctnagcctcctcggtgccggatntaccccatntcccgccaagggcgatggtcatnatctc 354
            || ||||||||||| ||||||| |||||||| |||||||||||||||||||||| |||||
Sbjct: 2348 ctcagcctcctcggcgccggatctaccccatctcccgccaagggcgatggtcatcatctc 2289

                                                                        
Query: 355  gtanatcttgccccccaactccgntggactntnaggtgtgtatccactgganatcagggc 414
            ||| ||||||||||||||||||| |||||| | ||| || || || ||||| ||||||||
Sbjct: 2288 gtagatcttgccccccaactccgctggactctcaggagtataaccgctggagatcagggc 2229

                                                                        
Query: 415  agtctcgtacagnaactnaactgccctnttggnttcggngctntnaggctcgttcttgca 474
            |||||||||||| | || ||||||||| || | ||||| ||| | |||||| ||||||||
Sbjct: 2228 agtctcgtacagcagctcaactgccctcttagcttcggtgctatcaggctcattcttgca 2169

                                                                        
Query: 475  agcagcactcaagtccttgacaatagggtgttcggnattgatttcaaaaattnttcttcc 534
            |||||||||||||||||||||||||||||| ||||  ||||||||||||||| | |||||
Sbjct: 2168 agcagcactcaagtccttgacaatagggtggtcggggttgatttcaaaaattctccttcc 2109

                                                                        
Query: 535  tctcatgaactccaagcttgatgtgtcaccaagcgtttgtgctttcataagcctttccat 594
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2108 tctcatgaactccaagcttgatgtgtcaccaagcgtttgtgctttcataagcctttccat 2049

                                      
Query: 595  gttagccgaccaaccaaacttgccag 620
            ||||||||||||||||||||||||||
Sbjct: 2048 gttagccgaccaaccaaacttgccag 2023



 Score =  194 bits (98), Expect = 2e-46
 Identities = 153/169 (90%), Gaps = 6/169 (3%)
 Strand = Plus / Minus

                                                                        
Query: 1    atttaatttnacgaccgtncaaaaagtcacctacaaaatttagccttgg-cg----caaa 55
            ||||||||| ||| ||||  |||||||||||||||||||||| |||||| ||    ||||
Sbjct: 2646 atttaatttcacggccgtcaaaaaagtcacctacaaaatttatccttgggcgataacaaa 2587

                                                                        
Query: 56   caagnattttggagctcagcgttcttacaaagacagtccattgctcgatgtcatcatcac 115
            |||| ||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2586 caag-attctggagctcagtgttcttacaaagacagtccatcgctcgatgtcatcatcac 2528

                                                             
Query: 116  tctggctccagtgatacttctattttttgctcatccacctccagggtat 164
            |||||||||||||||||| ||||||||||||| ||||||||||||||||
Sbjct: 2527 tctggctccagtgatactcctattttttgctcgtccacctccagggtat 2479
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>dbj|AK073817.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068G01, full
            insert sequence
          Length = 2890

 Score =  319 bits (161), Expect = 6e-84
 Identities = 262/301 (87%)
 Strand = Plus / Minus

                                                                        
Query: 320  ccccatntcccgccaagggcgatggtcatnatctcgtanatcttgccccccaactccgnt 379
            |||||| |||||||||| ||||||||||| |||||||| |||||||| |||||||| | |
Sbjct: 2458 ccccatctcccgccaagagcgatggtcatcatctcgtagatcttgccacccaactcagct 2399

                                                                        
Query: 380  ggactntnaggtgtgtatccactgganatcagggcagtctcgtacagnaactnaactgcc 439
            || || | ||| || ||||||||||| ||||| |||||||||||||  | || ||| |||
Sbjct: 2398 gggctgtcaggagtatatccactggagatcagcgcagtctcgtacaacagctcaacggcc 2339

                                                                        
Query: 440  ctnttggnttcggngctntnaggctcgttcttgcaagcagcactcaagtccttgacaata 499
            || |||| |||||  || | ||||||||| ||||||||||||||||||||||||||||| 
Sbjct: 2338 ctcttggcttcggtactttcaggctcgtttttgcaagcagcactcaagtccttgacaatt 2279

                                                                        
Query: 500  gggtgttcggnattgatttcaaaaattnttcttcctctcatgaactccaagcttgatgtg 559
            ||||| ||||  ||||||||||||||| ||||||||||||||||||| |||||||| || 
Sbjct: 2278 gggtggtcggggttgatttcaaaaattcttcttcctctcatgaactctaagcttgaagta 2219

                                                                        
Query: 560  tcaccaagcgtttgtgctttcataagcctttccatgttagccgaccaaccaaacttgcca 619
            |||||||| |||||||| |||||||||||||||||||| || ||||||||||| ||||||
Sbjct: 2218 tcaccaagtgtttgtgccttcataagcctttccatgtttgctgaccaaccaaatttgcca 2159

             
Query: 620  g 620
            |
Sbjct: 2158 g 2158
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>ref|XM_483065.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2702

 Score =  232 bits (117), Expect = 1e-57
 Identities = 251/301 (83%)
 Strand = Plus / Minus

                                                                        
Query: 320  ccccatntcccgccaagggcgatggtcatnatctcgtanatcttgccccccaactccgnt 379
            |||||| ||||||||||||| || ||||| ||||| || ||||| || ||||||||||  
Sbjct: 2355 ccccatctcccgccaagggcaattgtcatcatctcatagatcttaccacccaactccgca 2296

                                                                        
Query: 380  ggactntnaggtgtgtatccactgganatcagggcagtctcgtacagnaactnaactgcc 439
            ||||| | ||| || ||||||||||| ||||| |||||||| ||||  | || ||| |||
Sbjct: 2295 ggactgtcaggagtatatccactggagatcagagcagtctcatacaacagctcaacagcc 2236

                                                                        
Query: 440  ctnttggnttcggngctntnaggctcgttcttgcaagcagcactcaagtccttgacaata 499
            || || | ||| |  || | |||||| || ||||| |||||| |||||||||||||||||
Sbjct: 2235 ctcttagcttctgtactttcaggctcatttttgcaggcagcattcaagtccttgacaata 2176

                                                                        
Query: 500  gggtgttcggnattgatttcaaaaattnttcttcctctcatgaactccaagcttgatgtg 559
            ||||| || |  || ||||| |||||  |||| || ||||||||||||||||||||||||
Sbjct: 2175 gggtggtcagggttaatttcgaaaatccttctacccctcatgaactccaagcttgatgtg 2116

                                                                        
Query: 560  tcaccaagcgtttgtgctttcataagcctttccatgttagccgaccaaccaaacttgcca 619
            || ||||| |||||||||||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 2115 tccccaagtgtttgtgctttcatgagtctttccatgttggcagaccaaccaaacttgcca 2056

             
Query: 620  g 620
            |
Sbjct: 2055 g 2055
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>dbj|AK122102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033125K17, full
            insert sequence
          Length = 2702

 Score =  232 bits (117), Expect = 1e-57
 Identities = 251/301 (83%)
 Strand = Plus / Minus

                                                                        
Query: 320  ccccatntcccgccaagggcgatggtcatnatctcgtanatcttgccccccaactccgnt 379
            |||||| ||||||||||||| || ||||| ||||| || ||||| || ||||||||||  
Sbjct: 2355 ccccatctcccgccaagggcaattgtcatcatctcatagatcttaccacccaactccgca 2296

                                                                        
Query: 380  ggactntnaggtgtgtatccactgganatcagggcagtctcgtacagnaactnaactgcc 439
            ||||| | ||| || ||||||||||| ||||| |||||||| ||||  | || ||| |||
Sbjct: 2295 ggactgtcaggagtatatccactggagatcagagcagtctcatacaacagctcaacagcc 2236

                                                                        
Query: 440  ctnttggnttcggngctntnaggctcgttcttgcaagcagcactcaagtccttgacaata 499
            || || | ||| |  || | |||||| || ||||| |||||| |||||||||||||||||
Sbjct: 2235 ctcttagcttctgtactttcaggctcatttttgcaggcagcattcaagtccttgacaata 2176

                                                                        
Query: 500  gggtgttcggnattgatttcaaaaattnttcttcctctcatgaactccaagcttgatgtg 559
            ||||| || |  || ||||| |||||  |||| || ||||||||||||||||||||||||
Sbjct: 2175 gggtggtcagggttaatttcgaaaatccttctacccctcatgaactccaagcttgatgtg 2116

                                                                        
Query: 560  tcaccaagcgtttgtgctttcataagcctttccatgttagccgaccaaccaaacttgcca 619
            || ||||| |||||||||||||| || ||||||||||| || ||||||||||||||||||
Sbjct: 2115 tccccaagtgtttgtgctttcatgagtctttccatgttggcagaccaaccaaacttgcca 2056

             
Query: 620  g 620
            |
Sbjct: 2055 g 2055
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>gb|AY104129.1| Zea mays PCO085355 mRNA sequence
          Length = 1075

 Score =  161 bits (81), Expect = 3e-36
 Identities = 242/301 (80%)
 Strand = Plus / Minus

                                                                       
Query: 320 ccccatntcccgccaagggcgatggtcatnatctcgtanatcttgccccccaactccgnt 379
           |||||| ||||||| ||||| || | ||| ||||| || |||||||| |||||||||| |
Sbjct: 791 ccccatctcccgccgagggcaatcgccatcatctcatagatcttgccacccaactccgct 732

                                                                       
Query: 380 ggactntnaggtgtgtatccactgganatcagggcagtctcgtacagnaactnaactgcc 439
           ||||| |  || || |||||||| || || |  |||| |||||| || | || ||| |||
Sbjct: 731 ggactctccggagtatatccactcgagattaaagcagcctcgtataggagctcaacagcc 672

                                                                       
Query: 440 ctnttggnttcggngctntnaggctcgttcttgcaagcagcactcaagtccttgacaata 499
           ||  ||| ||| | ||| |  ||||| || ||||||||||| ||||| ||||||| ||| 
Sbjct: 671 ctcctggcttctgtgctttcgggctcatttttgcaagcagcgctcaaatccttgataatt 612

                                                                       
Query: 500 gggtgttcggnattgatttcaaaaattnttcttcctctcatgaactccaagcttgatgtg 559
           ||||| || |  |||||||| || ||  ||||||| |||||||| ||||| |||||||||
Sbjct: 611 gggtggtcagggttgatttcgaagatccttcttcccctcatgaattccaaacttgatgtg 552

                                                                       
Query: 560 tcaccaagcgtttgtgctttcataagcctttccatgttagccgaccaaccaaacttgcca 619
           |||||||| ||||| || ||||| ||||||||||| || || |||||||| |||||||||
Sbjct: 551 tcaccaagtgtttgagccttcatgagcctttccatattggcggaccaaccgaacttgcca 492

            
Query: 620 g 620
           |
Sbjct: 491 g 491
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  141 bits (71), Expect = 3e-30
 Identities = 99/109 (90%)
 Strand = Plus / Plus

                                                                            
Query: 480      cactcaagtccttgacaatagggtgttcggnattgatttcaaaaattnttcttcctctca 539
                ||||||||||||||||||| ||||| ||||  ||||||||||||||| ||||||||||||
Sbjct: 18096808 cactcaagtccttgacaattgggtggtcggggttgatttcaaaaattcttcttcctctca 18096867

                                                                 
Query: 540      tgaactccaagcttgatgtgtcaccaagcgtttgtgctttcataagcct 588
                ||||||| |||||||| || |||||||| |||||||| |||||||||||
Sbjct: 18096868 tgaactctaagcttgaagtatcaccaagtgtttgtgccttcataagcct 18096916



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                        
Query: 320      ccccatntcccgccaagggcgatggtcatnatctcgtanatcttgccccccaactc 375
                |||||| |||||||||| ||||||||||| |||||||| |||||||| ||||||||
Sbjct: 18096426 ccccatctcccgccaagagcgatggtcatcatctcgtagatcttgccacccaactc 18096481



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 72/86 (83%)
 Strand = Plus / Plus

                                                                            
Query: 395      tatccactgganatcagggcagtctcgtacagnaactnaactgccctnttggnttcggng 454
                ||||||||||| ||||| |||||||||||||  | || ||| ||||| |||| |||||  
Sbjct: 18096590 tatccactggagatcagcgcagtctcgtacaacagctcaacggccctcttggcttcggta 18096649

                                          
Query: 455      ctntnaggctcgttcttgcaagcagc 480
                || | ||||||||| |||||||||||
Sbjct: 18096650 ctttcaggctcgtttttgcaagcagc 18096675



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 586      cctttccatgttagccgaccaaccaaacttgccag 620
                |||||||||||| || ||||||||||| |||||||
Sbjct: 18097004 cctttccatgtttgctgaccaaccaaatttgccag 18097038
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>dbj|AP006169.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0026C08
          Length = 155316

 Score =  141 bits (71), Expect = 3e-30
 Identities = 99/109 (90%)
 Strand = Plus / Plus

                                                                         
Query: 480   cactcaagtccttgacaatagggtgttcggnattgatttcaaaaattnttcttcctctca 539
             ||||||||||||||||||| ||||| ||||  ||||||||||||||| ||||||||||||
Sbjct: 89930 cactcaagtccttgacaattgggtggtcggggttgatttcaaaaattcttcttcctctca 89989

                                                              
Query: 540   tgaactccaagcttgatgtgtcaccaagcgtttgtgctttcataagcct 588
             ||||||| |||||||| || |||||||| |||||||| |||||||||||
Sbjct: 89990 tgaactctaagcttgaagtatcaccaagtgtttgtgccttcataagcct 90038



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                     
Query: 320   ccccatntcccgccaagggcgatggtcatnatctcgtanatcttgccccccaactc 375
             |||||| |||||||||| ||||||||||| |||||||| |||||||| ||||||||
Sbjct: 89548 ccccatctcccgccaagagcgatggtcatcatctcgtagatcttgccacccaactc 89603



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 72/86 (83%)
 Strand = Plus / Plus

                                                                         
Query: 395   tatccactgganatcagggcagtctcgtacagnaactnaactgccctnttggnttcggng 454
             ||||||||||| ||||| |||||||||||||  | || ||| ||||| |||| |||||  
Sbjct: 89712 tatccactggagatcagcgcagtctcgtacaacagctcaacggccctcttggcttcggta 89771

                                       
Query: 455   ctntnaggctcgttcttgcaagcagc 480
             || | ||||||||| |||||||||||
Sbjct: 89772 ctttcaggctcgtttttgcaagcagc 89797



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 586   cctttccatgttagccgaccaaccaaacttgccag 620
             |||||||||||| || ||||||||||| |||||||
Sbjct: 90126 cctttccatgtttgctgaccaaccaaatttgccag 90160
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>gb|AY106328.1| Zea mays PCO125641 mRNA sequence
          Length = 1769

 Score =  137 bits (69), Expect = 5e-29
 Identities = 176/215 (81%)
 Strand = Plus / Minus

                                                                        
Query: 398  ccactgganatcagggcagtctcgtacagnaactnaactgccctnttggnttcggngctn 457
            |||||||| ||||| |||| |||||| || ||||   | ||||| |||| ||| |  || 
Sbjct: 1405 ccactggagatcagcgcagcctcgtatagcaactctgccgccctcttggcttcagtactt 1346

                                                                        
Query: 458  tnaggctcgttcttgcaagcagcactcaagtccttgacaatagggtgttcggnattgatt 517
            | ||||||||| |||||||||||  ||| ||||||||  ||||| || || |  ||||| 
Sbjct: 1345 tcaggctcgtttttgcaagcagcgttcaggtccttgatgataggatggtcagggttgatc 1286

                                                                        
Query: 518  tcaaaaattnttcttcctctcatgaactccaagcttgatgtgtcaccaagcgtttgtgct 577
            |||||||||  ||| |||||||||||||||| |||||||||||||||||| || ||||| 
Sbjct: 1285 tcaaaaattcgtctacctctcatgaactccaggcttgatgtgtcaccaagggtctgtgcc 1226

                                               
Query: 578  ttcataagcctttccatgttagccgaccaaccaaa 612
            ||||| |||||||||||||| || ||||| |||||
Sbjct: 1225 ttcatgagcctttccatgttggctgaccagccaaa 1191
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  107 bits (54), Expect = 4e-20
 Identities = 88/100 (88%)
 Strand = Plus / Plus

                                                                            
Query: 483      tcaagtccttgacaatagggtgttcggnattgatttcaaaaattnttcttcctctcatga 542
                |||||||||||||||||||||| || |  || ||||| |||||  |||| || |||||||
Sbjct: 24118301 tcaagtccttgacaatagggtggtcagggttaatttcgaaaatccttctacccctcatga 24118360

                                                        
Query: 543      actccaagcttgatgtgtcaccaagcgtttgtgctttcat 582
                ||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 24118361 actccaagcttgatgtgtccccaagtgtttgtgctttcat 24118400



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                          
Query: 320      ccccatntcccgccaagggcgatggtcatnatctcgtanatcttgccccccaactccg 377
                |||||| ||||||||||||| || ||||| ||||| || ||||| || ||||||||||
Sbjct: 24117967 ccccatctcccgccaagggcaattgtcatcatctcatagatcttaccacccaactccg 24118024



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                   
Query: 586      cctttccatgttagccgaccaaccaaacttgccag 620
                |||||||||||| || |||||||||||||||||||
Sbjct: 24118476 cctttccatgttggcagaccaaccaaacttgccag 24118510



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                               
Query: 395      tatccactgganatcagggcagtctcgtaca 425
                ||||||||||| ||||| |||||||| ||||
Sbjct: 24118126 tatccactggagatcagagcagtctcataca 24118156
to top
>dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0028A08
          Length = 150818

 Score =  107 bits (54), Expect = 4e-20
 Identities = 88/100 (88%)
 Strand = Plus / Plus

                                                                         
Query: 483   tcaagtccttgacaatagggtgttcggnattgatttcaaaaattnttcttcctctcatga 542
             |||||||||||||||||||||| || |  || ||||| |||||  |||| || |||||||
Sbjct: 71787 tcaagtccttgacaatagggtggtcagggttaatttcgaaaatccttctacccctcatga 71846

                                                     
Query: 543   actccaagcttgatgtgtcaccaagcgtttgtgctttcat 582
             ||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 71847 actccaagcttgatgtgtccccaagtgtttgtgctttcat 71886



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 50/58 (86%)
 Strand = Plus / Plus

                                                                       
Query: 320   ccccatntcccgccaagggcgatggtcatnatctcgtanatcttgccccccaactccg 377
             |||||| ||||||||||||| || ||||| ||||| || ||||| || ||||||||||
Sbjct: 71453 ccccatctcccgccaagggcaattgtcatcatctcatagatcttaccacccaactccg 71510



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 586   cctttccatgttagccgaccaaccaaacttgccag 620
             |||||||||||| || |||||||||||||||||||
Sbjct: 71962 cctttccatgttggcagaccaaccaaacttgccag 71996



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                            
Query: 395   tatccactgganatcagggcagtctcgtaca 425
             ||||||||||| ||||| |||||||| ||||
Sbjct: 71612 tatccactggagatcagagcagtctcataca 71642
to top
>ref|NM_179601.1| Arabidopsis thaliana CR88; ATP binding / unfolded protein binding
            AT2G04030 (CR88) transcript variant AT2G04030.2 mRNA,
            complete cds
          Length = 2612

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 75/88 (85%)
 Strand = Plus / Minus

                                                                        
Query: 533  cctctcatgaactccaagcttgatgtgtcaccaagcgtttgtgctttcataagcctttcc 592
            |||||||||||||||| |||||| ||||| ||||| |  ||||| ||||| |||||||||
Sbjct: 2086 cctctcatgaactccaggcttgaagtgtctccaagagcctgtgccttcattagcctttcc 2027

                                        
Query: 593  atgttagccgaccaaccaaacttgccag 620
            || ||||| ||||| || || |||||||
Sbjct: 2026 atattagctgaccacccgaatttgccag 1999
to top
>ref|NM_126439.2| Arabidopsis thaliana CR88; ATP binding / unfolded protein binding
            AT2G04030 (CR88) transcript variant AT2G04030.1 mRNA,
            complete cds
          Length = 2621

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 75/88 (85%)
 Strand = Plus / Minus

                                                                        
Query: 533  cctctcatgaactccaagcttgatgtgtcaccaagcgtttgtgctttcataagcctttcc 592
            |||||||||||||||| |||||| ||||| ||||| |  ||||| ||||| |||||||||
Sbjct: 2095 cctctcatgaactccaggcttgaagtgtctccaagagcctgtgccttcattagcctttcc 2036

                                        
Query: 593  atgttagccgaccaaccaaacttgccag 620
            || ||||| ||||| || || |||||||
Sbjct: 2035 atattagctgaccacccgaatttgccag 2008
to top
>gb|AY094422.1| Arabidopsis thaliana At2g04030/F3C11.14 mRNA, complete cds
          Length = 2596

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 75/88 (85%)
 Strand = Plus / Minus

                                                                        
Query: 533  cctctcatgaactccaagcttgatgtgtcaccaagcgtttgtgctttcataagcctttcc 592
            |||||||||||||||| |||||| ||||| ||||| |  ||||| ||||| |||||||||
Sbjct: 2095 cctctcatgaactccaggcttgaagtgtctccaagagcctgtgccttcattagcctttcc 2036

                                        
Query: 593  atgttagccgaccaaccaaacttgccag 620
            || ||||| ||||| || || |||||||
Sbjct: 2035 atattagctgaccacccgaatttgccag 2008
to top
>gb|AF436826.1|AF436826 Arabidopsis thaliana At2g04030/F3C11.14 mRNA, complete cds
          Length = 2610

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 75/88 (85%)
 Strand = Plus / Minus

                                                                        
Query: 533  cctctcatgaactccaagcttgatgtgtcaccaagcgtttgtgctttcataagcctttcc 592
            |||||||||||||||| |||||| ||||| ||||| |  ||||| ||||| |||||||||
Sbjct: 2095 cctctcatgaactccaggcttgaagtgtctccaagagcctgtgccttcattagcctttcc 2036

                                        
Query: 593  atgttagccgaccaaccaaacttgccag 620
            || ||||| ||||| || || |||||||
Sbjct: 2035 atattagctgaccacccgaatttgccag 2008
to top
>gb|AY053403.1| Arabidopsis thaliana At2g04030/F3C11.14 mRNA, complete cds
          Length = 2507

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 75/88 (85%)
 Strand = Plus / Minus

                                                                        
Query: 533  cctctcatgaactccaagcttgatgtgtcaccaagcgtttgtgctttcataagcctttcc 592
            |||||||||||||||| |||||| ||||| ||||| |  ||||| ||||| |||||||||
Sbjct: 2080 cctctcatgaactccaggcttgaagtgtctccaagagcctgtgccttcattagcctttcc 2021

                                        
Query: 593  atgttagccgaccaaccaaacttgccag 620
            || ||||| ||||| || || |||||||
Sbjct: 2020 atattagctgaccacccgaatttgccag 1993
to top
>emb|BX820811.1|CNS0A8OS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH71ZC02 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 751

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 75/88 (85%)
 Strand = Plus / Minus

                                                                       
Query: 533 cctctcatgaactccaagcttgatgtgtcaccaagcgtttgtgctttcataagcctttcc 592
           |||||||||||||||| |||||| ||||| ||||| |  ||||| ||||| |||||||||
Sbjct: 267 cctctcatgaactccaggcttgaagtgtctccaagagcctgtgccttcattagcctttcc 208

                                       
Query: 593 atgttagccgaccaaccaaacttgccag 620
           || ||||| ||||| || || |||||||
Sbjct: 207 atattagctgaccacccgaatttgccag 180
to top
>gb|BT002234.1| Arabidopsis thaliana At2g04030/F3C11.14 mRNA, complete cds
          Length = 2343

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 75/88 (85%)
 Strand = Plus / Minus

                                                                        
Query: 533  cctctcatgaactccaagcttgatgtgtcaccaagcgtttgtgctttcataagcctttcc 592
            |||||||||||||||| |||||| ||||| ||||| |  ||||| ||||| |||||||||
Sbjct: 2012 cctctcatgaactccaggcttgaagtgtctccaagagcctgtgccttcattagcctttcc 1953

                                        
Query: 593  atgttagccgaccaaccaaacttgccag 620
            || ||||| ||||| || || |||||||
Sbjct: 1952 atattagctgaccacccgaatttgccag 1925
to top
>emb|Y11829.1|ATHSP881 A.thaliana hsp88.1 gene
          Length = 4544

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                       
Query: 533  cctctcatgaactccaagcttgatgtgtcaccaagcgtttgtgctttcataagcctttc 591
            |||||||||||||||| |||||| ||||| ||||| |  ||||| ||||| ||||||||
Sbjct: 3867 cctctcatgaactccaggcttgaagtgtctccaagagcctgtgccttcattagcctttc 3809
to top
>gb|AC007167.5| Arabidopsis thaliana chromosome 2 clone F3C11 map mi310, complete
             sequence
          Length = 103874

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 51/59 (86%)
 Strand = Plus / Minus

                                                                        
Query: 533   cctctcatgaactccaagcttgatgtgtcaccaagcgtttgtgctttcataagcctttc 591
             |||||||||||||||| |||||| ||||| ||||| |  ||||| ||||| ||||||||
Sbjct: 94439 cctctcatgaactccaggcttgaagtgtctccaagagcctgtgccttcattagcctttc 94381
to top
>emb|AJ719165.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT21-3-205, cultivar Bright
           Yellow 2
          Length = 165

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 93/116 (80%)
 Strand = Plus / Minus

                                                                       
Query: 500 gggtgttcggnattgatttcaaaaattnttcttcctctcatgaactccaagcttgatgtg 559
           |||||||||| |||||| ||||| | | |||| |  |||||||| |||| | | || || 
Sbjct: 152 gggtgttcgggattgatctcaaagactcttctgctcctcatgaaatccaggttggaggta 93

                                                                   
Query: 560 tcaccaagcgtttgtgctttcataagcctttccatgttagccgaccaaccaaactt 615
           |||||||  ||||| || ||||| ||||| ||||| || || ||||||||||||||
Sbjct: 92  tcaccaacagtttgggccttcatcagcctctccatattggctgaccaaccaaactt 37
to top
>gb|BT017162.1| Zea mays clone EL01N0368C07.c mRNA sequence
          Length = 1171

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 572 tgtgctttcataagcctttccatgttagccgaccaaccaaactt 615
           |||||| |||| ||||||||||| || || ||||||||||||||
Sbjct: 686 tgtgctctcatcagcctttccatattggctgaccaaccaaactt 729
to top
>gb|AY107109.1| Zea mays PCO121171 mRNA sequence
          Length = 1869

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 572  tgtgctttcataagcctttccatgttagccgaccaaccaaactt 615
            |||||| |||| ||||||||||| || || ||||||||||||||
Sbjct: 1123 tgtgctctcatcagcctttccatattggctgaccaaccaaactt 1080
to top
>gb|AF500173.1| Issatchenkia orientalis heat shock protein 90 (hsp 90) gene,
           partial cds
          Length = 960

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                  
Query: 571 ttgtgctttcataagcctttccatgttagccgaccaacc 609
           |||||| |||||||  |||||||||||||| ||||||||
Sbjct: 624 ttgtgccttcataattctttccatgttagcagaccaacc 586
to top
>ref|XM_448795.1| Candida glabrata CBS138, CAGL0L00495g partial mRNA
          Length = 2118

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 587  ctttccatgttagccgaccaaccaaa 612
            |||||||||||||| |||||||||||
Sbjct: 1760 ctttccatgttagcggaccaaccaaa 1735
to top
>emb|Z67751.1|SC38KCXVI S.cerevisiae DNA (chromosome XVI; 38 kb)
          Length = 37808

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 587   ctttccatgttagccgaccaaccaaa 612
             |||||||||||||| |||||||||||
Sbjct: 28239 ctttccatgttagcagaccaaccaaa 28264
to top
>emb|CR380958.1| Candida glabrata strain CBS138 chromosome L complete sequence
          Length = 1440588

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 587   ctttccatgttagccgaccaaccaaa 612
             |||||||||||||| |||||||||||
Sbjct: 53483 ctttccatgttagcggaccaaccaaa 53508
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 586      cctttccatgttagccgaccaaccaaactt 615
                |||||||||||| || ||||||||||||||
Sbjct: 19963399 cctttccatgttcgcagaccaaccaaactt 19963428
to top
>gb|AF251005.1|AF251005 Candida tropicalis heat shock protein 90 gene, partial cds
          Length = 2070

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 587  ctttccatgttagccgaccaaccaaa 612
            |||||||||||||| |||||||||||
Sbjct: 1712 ctttccatgttagcagaccaaccaaa 1687
to top
>dbj|AK069204.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009C12, full
            insert sequence
          Length = 2803

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 586  cctttccatgttagccgaccaaccaaactt 615
            |||||||||||| || ||||||||||||||
Sbjct: 2191 cctttccatgttcgcagaccaaccaaactt 2162
to top
>dbj|AK067032.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088H23, full
            insert sequence
          Length = 1894

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 586  cctttccatgttagccgaccaaccaaactt 615
            |||||||||||| || ||||||||||||||
Sbjct: 1262 cctttccatgttcgcagaccaaccaaactt 1233
to top
>dbj|AK059704.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-D05, full
           insert sequence
          Length = 792

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 586 cctttccatgttagccgaccaaccaaactt 615
           |||||||||||| || ||||||||||||||
Sbjct: 162 cctttccatgttcgcagaccaaccaaactt 133
to top
>emb|Z73596.1|SCYPL240C S.cerevisiae chromosome XVI reading frame ORF YPL240c
          Length = 3225

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 587 ctttccatgttagccgaccaaccaaa 612
           |||||||||||||| |||||||||||
Sbjct: 596 ctttccatgttagcagaccaaccaaa 621
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 586      cctttccatgttagccgaccaaccaaactt 615
                |||||||||||| || ||||||||||||||
Sbjct: 19889613 cctttccatgttcgcagaccaaccaaactt 19889642
to top
>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 165433

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 586   cctttccatgttagccgaccaaccaaactt 615
             |||||||||||| || ||||||||||||||
Sbjct: 63861 cctttccatgttcgcagaccaaccaaactt 63832
to top
>gb|K01387.1|YSCHSP82A Yeast (S.cerevisiae) HSP82 (heat shock-inducible) gene, complete
            coding sequence and flanks
          Length = 2734

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 587  ctttccatgttagccgaccaaccaaa 612
            |||||||||||||| |||||||||||
Sbjct: 2104 ctttccatgttagcagaccaaccaaa 2079
to top
>gb|AY729858.1| Pavlova lutheri heat shock protein 90 gene, partial cds
          Length = 1734

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 578  ttcataagcctttccatgttagccgacca 606
            |||||||  ||||||||||||||||||||
Sbjct: 1730 ttcataatgctttccatgttagccgacca 1702
to top
>gb|AC159649.3| Mus musculus BAC clone RP23-46D6 from chromosome 12, complete sequence
          Length = 198777

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 480    cactcaagtccttgacaatag 500
              |||||||||||||||||||||
Sbjct: 115100 cactcaagtccttgacaatag 115080
to top
>gb|AY641576.1| Avian infectious bronchitis virus isolate Peafowl/GD/KQ6/2003,
            complete genome
          Length = 27434

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   ctcgatgtcatcatcactct 118
            ||||||||||||||||||||
Sbjct: 2886 ctcgatgtcatcatcactct 2867
to top
>gb|AC183296.3| Pan troglodytes BAC clone CH251-352A17 from chromosome 19, complete
              sequence
          Length = 180482

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 577    tttcataagcctttccatgttagc 600
              ||||||||||||||| ||||||||
Sbjct: 120284 tttcataagcctttcaatgttagc 120261
to top
>gb|AY514485.1| Avian infectious bronchitis virus strain Cal99, complete genome
          Length = 27693

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   ctcgatgtcatcatcactct 118
            ||||||||||||||||||||
Sbjct: 2884 ctcgatgtcatcatcactct 2865
to top
>gb|AC116996.3| Mus musculus BAC clone RP23-6B22 from 15, complete sequence
          Length = 229669

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   cagtgatacttctatttttt 143
             ||||||||||||||||||||
Sbjct: 10287 cagtgatacttctatttttt 10268
to top
>emb|AL049794.16|HSDJ777L9 Human DNA sequence from clone RP4-777L9 on chromosome 20 Contains the
             5' end of the C20orf23 gene for a novel protein similar to
             KIF1 type and other kinesin-like proteins, the RPLP0P1
             gene for ribosomal protein large P0 pseudogene 1 and a CpG
             island, complete sequence
          Length = 119696

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    aaaaagtcacctacaaaatt 40
             ||||||||||||||||||||
Sbjct: 84665 aaaaagtcacctacaaaatt 84646
to top
>gb|AC092296.2| Homo sapiens chromosome 19 clone CTD-3162L10, complete sequence
          Length = 150222

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 577   tttcataagcctttccatgttagc 600
             ||||||||||||||| ||||||||
Sbjct: 34418 tttcataagcctttcaatgttagc 34395
to top
>gb|AC099397.5| Homo sapiens BAC clone RP11-247K9 from 4, complete sequence
          Length = 100007

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 572   tgtgctttcataagcctttc 591
             ||||||||||||||||||||
Sbjct: 30359 tgtgctttcataagcctttc 30378
to top
>gb|AF165818.4|AF165818 Guillardia theta nucleomorph chromosome 1, complete sequence
          Length = 196216

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                     
Query: 571   ttgtgctttcataagcctttccatgttagccgaccaacca 610
             ||||||||||||||  | ||||||||| || |||||||||
Sbjct: 14495 ttgtgctttcataatacgttccatgtttgctgaccaacca 14456
to top
>gb|AF123259.1|AF123259 Lycopersicon esculentum heat shock protein 90 (HSP90) mRNA, partial
           cds
          Length = 1610

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 575 gctttcataagcctttccatgttagccgaccaacca 610
           |||||||| | ||||||||||||||| | |||||||
Sbjct: 885 gctttcatgatcctttccatgttagctgtccaacca 850
to top
>gb|AC160934.2| Mus musculus BAC clone RP23-435H22 from chromosome 15, complete sequence
          Length = 183147

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 124    cagtgatacttctatttttt 143
              ||||||||||||||||||||
Sbjct: 128559 cagtgatacttctatttttt 128578
to top
>gb|J04017.1|SCMHSP86 S.mansoni heat shock protein 86 mRNA, complete cds
          Length = 1365

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 571 ttgtgctttcataagcctttccatgttagccgaccaaccaaact 614
           |||||| ||||| | ||| ||||||||||| |||||||| ||||
Sbjct: 985 ttgtgccttcatgatcctctccatgttagcagaccaaccgaact 942


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,558,494
Number of Sequences: 3902068
Number of extensions: 3558494
Number of successful extensions: 57699
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57554
Number of HSP's gapped (non-prelim): 144
length of query: 620
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 597
effective length of database: 17,143,297,704
effective search space: 10234548729288
effective search space used: 10234548729288
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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