ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags15m18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK060099.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 7e-36
2ref|NM_188391.1| Oryza sativa (japonica cultivar-group), Ozsa811... 151 2e-33
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 151 2e-33
4dbj|AP002093.1| Oryza sativa (japonica cultivar-group) genomic D... 151 2e-33
5dbj|AP002092.1| Oryza sativa (japonica cultivar-group) genomic D... 151 2e-33
6dbj|AK119774.1| Oryza sativa (japonica cultivar-group) cDNA clon... 151 2e-33
7gb|AY110901.1| Zea mays CL7341_1 mRNA sequence 135 1e-28
8emb|AL590423.14| Human DNA sequence from clone RP13-364K23 on ch... 48 0.018
9gb|BT009174.1| Triticum aestivum clone wl1n.pk0107.h1:fis, full ... 46 0.071
10gb|AY105303.1| Zea mays PCO075489 mRNA sequence 46 0.071
11emb|AL365260.11| Human DNA sequence from clone RP11-433J22 on ch... 44 0.28
12gb|AC093871.3| Homo sapiens BAC clone RP11-608B3 from 4, complet... 44 0.28
13emb|Z82263.1|CEC47A4 Caenorhabditis elegans Cosmid C47A4, comple... 44 0.28
14gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.1
15emb|Z83236.1|CEK10H10 Caenorhabditis elegans Cosmid K10H10, comp... 42 1.1
16gb|AE014818.1| Plasmodium falciparum 3D7 chromosome 14 section 3... 42 1.1
17emb|BX511209.11| Zebrafish DNA sequence from clone CH211-129A6 i... 42 1.1
18gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.1
19gb|AC104297.1| Homo sapiens chromosome 3 clone RP11-8D23, comple... 42 1.1
20gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.1
21gb|AF466285.1| Oryza sativa susceptibility homeodomain transcipt... 42 1.1
22dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
23dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
24gb|AC104667.5| Homo sapiens BAC clone RP11-810D14 from 2, comple... 42 1.1
25gb|AC138973.2| Homo sapiens 3 BAC CTD-2532M17 (Cal Tech Human BA... 42 1.1
26dbj|AP004818.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
27dbj|AP004809.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
28dbj|AK122046.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
29dbj|AK063825.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.1
30emb|AL670544.7| Mouse DNA sequence from clone RP23-16G8 on chrom... 42 1.1
31gb|AC154844.2| Mus musculus BAC clone RP23-46K13 from chromosome... 40 4.4
32gb|AC123618.26| Mus musculus chromosome 12, clone RP23-38N23, co... 40 4.4
33gb|AE016827.1| Mannheimia succiniciproducens MBEL55E, complete g... 40 4.4
34gb|AC107085.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.4
35ref|XM_586687.2| PREDICTED: Bos taurus similar to BTG2 protein (... 40 4.4
36gb|BC056809.1| Danio rerio zgc:63728, mRNA (cDNA clone MGC:63728... 40 4.4
37ref|NM_213504.1| Danio rerio zgc:63728 (zgc:63728), mRNA 40 4.4
38emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 4.4
39emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 40 4.4
40gb|AC124393.5| Mus musculus BAC clone RP24-331E1 from chromosome... 40 4.4
41gb|AC122517.2| Mus musculus BAC clone RP24-459G24 from chromosom... 40 4.4
42emb|Z81585.1|CET05E12 Caenorhabditis elegans Cosmid T05E12, comp... 40 4.4
43gb|AC006972.2| Homo sapiens PAC clone RP4-799O8 from 7, complete... 40 4.4
44emb|AL449283.13| Human DNA sequence from clone RP11-386I23 on ch... 40 4.4
45emb|AL360227.17| Human DNA sequence from clone RP11-428F8 on chr... 40 4.4
46gb|AC161511.3| Mus musculus chromosome 18, clone RP23-37O16, com... 40 4.4
47emb|CR548612.1| Paramecium tetraurelia macronuclear largest chro... 40 4.4
48gb|AC063923.21| Homo sapiens 3 BAC RP11-59E19 (Roswell Park Canc... 40 4.4
49emb|BX572630.10| Zebrafish DNA sequence from clone CH211-24O10 i... 40 4.4
50gb|AC116099.2| Homo sapiens chromosome 1 clone RP11-338F23, comp... 40 4.4
51gb|AC112138.3| Homo sapiens 3 BAC RP11-715D1 (Roswell Park Cance... 40 4.4
52gb|AC100773.2| Homo sapiens chromosome 11, clone RP11-960D24, co... 40 4.4
53emb|BX294000.11| Zebrafish DNA sequence from clone DKEYP-67B10, ... 40 4.4
54emb|BX465186.11| Zebrafish DNA sequence from clone DKEY-106M10 i... 40 4.4
55dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
56dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
57dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
58dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
59gb|AC116616.5| Homo sapiens BAC clone RP11-51M24 from 4, complet... 40 4.4
60gb|AC009236.4| Homo sapiens BAC clone RP11-421J10 from 2, comple... 40 4.4
61gb|AC084321.37| Mus musculus strain C57BL/6J chromosome 7 clone ... 40 4.4
62gb|AC008121.43| Homo sapiens 12 BAC RP11-407N8 (Roswell Park Can... 40 4.4
63dbj|AP003309.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
64dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
65gb|AC067990.12| Homo sapiens chromosome 11, clone RP11-682M10, c... 40 4.4
66dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
67dbj|AP005492.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
68dbj|AP005421.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
69dbj|AP005321.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
70dbj|AP005310.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.4
71gb|AC006384.2|AC006384 Homo sapiens BAC clone RP11-557I6 from 7q... 40 4.4
72gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete ge... 40 4.4
73gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 4.4
74emb|AL954157.3|CNS08CCV Oryza sativa chromosome 12, . BAC OSJNBa... 40 4.4
75emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb... 40 4.4
76emb|AL845347.4|CNS08CB9 Oryza sativa chromosome 12, . BAC OSJNBb... 40 4.4
77emb|AL845346.4|CNS08CB8 Oryza sativa chromosome 12, . BAC OSJNBa... 40 4.4
78emb|BX001060.3|CNS08CE8 Oryza sativa chromosome 12, . BAC OSJNBa... 40 4.4
79emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa... 40 4.4
80emb|AL928775.2|CNS08CC5 Oryza sativa chromosome 12, . BAC OSJNBa... 40 4.4
81gb|U00090.1| Rhizobium sp. NGR234 plasmid pNGR234a, complete seq... 40 4.4
82dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 4.4 
>dbj|AK060099.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-H01, full
           insert sequence
          Length = 957

 Score =  159 bits (80), Expect = 7e-36
 Identities = 166/195 (85%), Gaps = 3/195 (1%)
 Strand = Plus / Minus

                                                                       
Query: 138 acggcggcctccttgccgtcggcagctgc---ggtggcggggaccttggccttgccatcg 194
           ||||||| ||||||||||| ||| |||||   || ||||||||||||| |||||||||||
Sbjct: 575 acggcggtctccttgccgttggccgctgctgcggcggcggggaccttgcccttgccatcg 516

                                                                       
Query: 195 tccactttgccgaaggcggagacggggaaggtcctcctgagcccggtgggcgtnttgaag 254
           ||| | ||| ||||||||  ||||||| ||||||||| ||| |||||||| || ||||||
Sbjct: 515 tcctccttggcgaaggcgtcgacggggtaggtcctcccgaggccggtgggggtcttgaag 456

                                                                       
Query: 255 gtgatcttggaggggtcatccttgtcgatgtacatatnacanagggtgatccagatgagg 314
           ||||||||||||||||| |||||||||||| |||| |   | |||| || ||||||||||
Sbjct: 455 gtgatcttggaggggtcgtccttgtcgatgaacatgtcggagagggagacccagatgagg 396

                          
Query: 315 agttccttgctcttg 329
           || |||||| |||||
Sbjct: 395 agctccttggtcttg 381
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>ref|NM_188391.1| Oryza sativa (japonica cultivar-group), Ozsa8117 predicted mRNA
          Length = 504

 Score =  151 bits (76), Expect = 2e-33
 Identities = 165/195 (84%), Gaps = 3/195 (1%)
 Strand = Plus / Minus

                                                                       
Query: 138 acggcggcctccttgccgtcggcagctgc---ggtggcggggaccttggccttgccatcg 194
           ||||||| ||||||||||| ||| |||||   || ||||||||||||| |||||||||||
Sbjct: 485 acggcggtctccttgccgttggccgctgctgcggcggcggggaccttgcccttgccatcg 426

                                                                       
Query: 195 tccactttgccgaaggcggagacggggaaggtcctcctgagcccggtgggcgtnttgaag 254
           ||| | ||| ||||||||  ||||||| ||||||||| ||| |||||||| || ||||||
Sbjct: 425 tcctccttggcgaaggcgtcgacggggtaggtcctcccgaggccggtgggggtcttgaag 366

                                                                       
Query: 255 gtgatcttggaggggtcatccttgtcgatgtacatatnacanagggtgatccagatgagg 314
           ||||||||||||| ||| |||||||||||| |||| |   | |||| || ||||||||||
Sbjct: 365 gtgatcttggaggcgtcgtccttgtcgatgaacatgtcggagagggagacccagatgagg 306

                          
Query: 315 agttccttgctcttg 329
           || |||||| |||||
Sbjct: 305 agctccttggtcttg 291
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  151 bits (76), Expect = 2e-33
 Identities = 165/195 (84%), Gaps = 3/195 (1%)
 Strand = Plus / Plus

                                                                           
Query: 138     acggcggcctccttgccgtcggcagctgc---ggtggcggggaccttggccttgccatcg 194
               ||||||| ||||||||||| ||| |||||   || ||||||||||||| |||||||||||
Sbjct: 6010244 acggcggtctccttgccgttggccgctgctgcggcggcggggaccttgcccttgccatcg 6010303

                                                                           
Query: 195     tccactttgccgaaggcggagacggggaaggtcctcctgagcccggtgggcgtnttgaag 254
               ||| | ||| ||||||||  ||||||| ||||||||| ||| |||||||| || ||||||
Sbjct: 6010304 tcctccttggcgaaggcgtcgacggggtaggtcctcccgaggccggtgggggtcttgaag 6010363

                                                                           
Query: 255     gtgatcttggaggggtcatccttgtcgatgtacatatnacanagggtgatccagatgagg 314
               ||||||||||||| ||| |||||||||||| |||| |   | |||| || ||||||||||
Sbjct: 6010364 gtgatcttggaggcgtcgtccttgtcgatgaacatgtcggagagggagacccagatgagg 6010423

                              
Query: 315     agttccttgctcttg 329
               || |||||| |||||
Sbjct: 6010424 agctccttggtcttg 6010438



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 65       ttcaaacttttttctttaaa 84
                ||||||||||||||||||||
Sbjct: 30612149 ttcaaacttttttctttaaa 30612168
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>dbj|AP002093.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0466B10
          Length = 151806

 Score =  151 bits (76), Expect = 2e-33
 Identities = 165/195 (84%), Gaps = 3/195 (1%)
 Strand = Plus / Plus

                                                                         
Query: 138   acggcggcctccttgccgtcggcagctgc---ggtggcggggaccttggccttgccatcg 194
             ||||||| ||||||||||| ||| |||||   || ||||||||||||| |||||||||||
Sbjct: 78132 acggcggtctccttgccgttggccgctgctgcggcggcggggaccttgcccttgccatcg 78191

                                                                         
Query: 195   tccactttgccgaaggcggagacggggaaggtcctcctgagcccggtgggcgtnttgaag 254
             ||| | ||| ||||||||  ||||||| ||||||||| ||| |||||||| || ||||||
Sbjct: 78192 tcctccttggcgaaggcgtcgacggggtaggtcctcccgaggccggtgggggtcttgaag 78251

                                                                         
Query: 255   gtgatcttggaggggtcatccttgtcgatgtacatatnacanagggtgatccagatgagg 314
             ||||||||||||| ||| |||||||||||| |||| |   | |||| || ||||||||||
Sbjct: 78252 gtgatcttggaggcgtcgtccttgtcgatgaacatgtcggagagggagacccagatgagg 78311

                            
Query: 315   agttccttgctcttg 329
             || |||||| |||||
Sbjct: 78312 agctccttggtcttg 78326
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>dbj|AP002092.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0031E09
          Length = 176349

 Score =  151 bits (76), Expect = 2e-33
 Identities = 165/195 (84%), Gaps = 3/195 (1%)
 Strand = Plus / Plus

                                                                         
Query: 138   acggcggcctccttgccgtcggcagctgc---ggtggcggggaccttggccttgccatcg 194
             ||||||| ||||||||||| ||| |||||   || ||||||||||||| |||||||||||
Sbjct: 34601 acggcggtctccttgccgttggccgctgctgcggcggcggggaccttgcccttgccatcg 34660

                                                                         
Query: 195   tccactttgccgaaggcggagacggggaaggtcctcctgagcccggtgggcgtnttgaag 254
             ||| | ||| ||||||||  ||||||| ||||||||| ||| |||||||| || ||||||
Sbjct: 34661 tcctccttggcgaaggcgtcgacggggtaggtcctcccgaggccggtgggggtcttgaag 34720

                                                                         
Query: 255   gtgatcttggaggggtcatccttgtcgatgtacatatnacanagggtgatccagatgagg 314
             ||||||||||||| ||| |||||||||||| |||| |   | |||| || ||||||||||
Sbjct: 34721 gtgatcttggaggcgtcgtccttgtcgatgaacatgtcggagagggagacccagatgagg 34780

                            
Query: 315   agttccttgctcttg 329
             || |||||| |||||
Sbjct: 34781 agctccttggtcttg 34795
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>dbj|AK119774.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-F06, full
           insert sequence
          Length = 787

 Score =  151 bits (76), Expect = 2e-33
 Identities = 165/195 (84%), Gaps = 3/195 (1%)
 Strand = Plus / Minus

                                                                       
Query: 138 acggcggcctccttgccgtcggcagctgc---ggtggcggggaccttggccttgccatcg 194
           ||||||| ||||||||||| ||| |||||   || ||||||||||||| |||||||||||
Sbjct: 577 acggcggtctccttgccgttggccgctgctgcggcggcggggaccttgcccttgccatcg 518

                                                                       
Query: 195 tccactttgccgaaggcggagacggggaaggtcctcctgagcccggtgggcgtnttgaag 254
           ||| | ||| ||||||||  ||||||| ||||||||| ||| |||||||| || ||||||
Sbjct: 517 tcctccttggcgaaggcgtcgacggggtaggtcctcccgaggccggtgggggtcttgaag 458

                                                                       
Query: 255 gtgatcttggaggggtcatccttgtcgatgtacatatnacanagggtgatccagatgagg 314
           ||||||||||||| ||| |||||||||||| |||| |   | |||| || ||||||||||
Sbjct: 457 gtgatcttggaggcgtcgtccttgtcgatgaacatgtcggagagggagacccagatgagg 398

                          
Query: 315 agttccttgctcttg 329
           || |||||| |||||
Sbjct: 397 agctccttggtcttg 383
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>gb|AY110901.1| Zea mays CL7341_1 mRNA sequence
          Length = 746

 Score =  135 bits (68), Expect = 1e-28
 Identities = 113/129 (87%)
 Strand = Plus / Minus

                                                                       
Query: 205 cgaaggcggagacggggaaggtcctcctgagcccggtgggcgtnttgaaggtgatcttgg 264
           ||||||||||||||||| ||||||| | ||||||||||||||| ||||||||||||||||
Sbjct: 446 cgaaggcggagacggggtaggtcctgccgagcccggtgggcgtcttgaaggtgatcttgg 387

                                                                       
Query: 265 aggggtcatccttgtcgatgtacatatnacanagggtgatccagatgaggagttccttgc 324
           ||||||| ||| |||||| | |||| |   | ||||||| |||||||||||| |||||| 
Sbjct: 386 aggggtcgtccctgtcgacgaacatgtcggagagggtgacccagatgaggagctccttgg 327

                    
Query: 325 tcttgaccc 333
           |||||||||
Sbjct: 326 tcttgaccc 318
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>emb|AL590423.14| Human DNA sequence from clone RP13-364K23 on chromosome Xq22.1-23
             Contains the DSIPI gene for delta sleep inducing peptide,
             immunoreactor (DIP, GILZ, TSC-22R), the 5' end of a novel
             gene and two CpG islands, complete sequence
          Length = 83167

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 64    gttcaaacttttttctttaaaaaa 87
             ||||||||||||||||||||||||
Sbjct: 44588 gttcaaacttttttctttaaaaaa 44611
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>gb|BT009174.1| Triticum aestivum clone wl1n.pk0107.h1:fis, full insert mRNA
           sequence
          Length = 862

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 299 ggtgatccagatgaggagttccttgctcttgaccc 333
           ||||| |||||||||||| ||||||||||| ||||
Sbjct: 408 ggtgacccagatgaggagctccttgctcttcaccc 374
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>gb|AY105303.1| Zea mays PCO075489 mRNA sequence
          Length = 894

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 299 ggtgatccagatgaggagttccttgctcttgaccc 333
           ||||| |||||||||||| ||||||||||| ||||
Sbjct: 430 ggtgacccagatgaggagctccttgctcttcaccc 396
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>emb|AL365260.11| Human DNA sequence from clone RP11-433J22 on chromosome 1 Contains
            the GJA5 gene for gap junction protein, alpha 5, 40kDa
            (connexin 40) protein, complete sequence
          Length = 114412

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 12   gtaaattttcaaagcaagtagt 33
            ||||||||||||||||||||||
Sbjct: 6421 gtaaattttcaaagcaagtagt 6400
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>gb|AC093871.3| Homo sapiens BAC clone RP11-608B3 from 4, complete sequence
          Length = 167818

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 70     acttttttctttaaaaaatctt 91
              ||||||||||||||||||||||
Sbjct: 126600 acttttttctttaaaaaatctt 126579
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>emb|Z82263.1|CEC47A4 Caenorhabditis elegans Cosmid C47A4, complete sequence
          Length = 40664

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 65    ttcaaacttttttctttaaaaa 86
             ||||||||||||||||||||||
Sbjct: 12575 ttcaaacttttttctttaaaaa 12596
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 63      cgttcaaacttttttctttaaaaaa 87
               ||||||||||||||| |||||||||
Sbjct: 5101263 cgttcaaacttttttttttaaaaaa 5101287
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>emb|Z83236.1|CEK10H10 Caenorhabditis elegans Cosmid K10H10, complete sequence
          Length = 30033

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 70    acttttttctttaaaaaatcttgat 94
             |||||||||||| ||||||||||||
Sbjct: 11740 acttttttcttttaaaaatcttgat 11764
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>gb|AE014818.1| Plasmodium falciparum 3D7 chromosome 14 section 3 of 13 of the complete
              sequence
          Length = 252632

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 68     aaacttttttctttaaaaaat 88
              |||||||||||||||||||||
Sbjct: 243086 aaacttttttctttaaaaaat 243066
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>emb|BX511209.11| Zebrafish DNA sequence from clone CH211-129A6 in linkage group 5,
             complete sequence
          Length = 159017

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 71    cttttttctttaaaaaatctt 91
             |||||||||||||||||||||
Sbjct: 90411 cttttttctttaaaaaatctt 90431
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>gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0058P18, from chromosome 3, complete sequence
          Length = 155037

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 63    cgttcaaacttttttctttaaaaaa 87
             ||||||||||||||| |||||||||
Sbjct: 68442 cgttcaaacttttttttttaaaaaa 68418
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>gb|AC104297.1| Homo sapiens chromosome 3 clone RP11-8D23, complete sequence
          Length = 151504

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 64     gttcaaacttttttctttaaaaaat 88
              |||||||||||||||||| ||||||
Sbjct: 115144 gttcaaacttttttctttcaaaaat 115120
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>gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0091J11, from chromosome 3, complete sequence
          Length = 181163

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 63     cgttcaaacttttttctttaaaaaa 87
              ||||||||||||||| |||||||||
Sbjct: 155255 cgttcaaacttttttttttaaaaaa 155231
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>gb|AF466285.1| Oryza sativa susceptibility homeodomain transciption factor (HDTF)
           mRNA, partial cds
          Length = 580

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 305 ccagatgaggagttccttgctcttgaccc 333
           |||||||||||| ||||||||||| ||||
Sbjct: 188 ccagatgaggagctccttgctcttcaccc 160
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 305      ccagatgaggagttccttgctcttgaccc 333
                |||||||||||| ||||||||||| ||||
Sbjct: 19876477 ccagatgaggagctccttgctcttcaccc 19876505



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 304      tccagatgaggagttccttg 323
                ||||||||||||||||||||
Sbjct: 18733274 tccagatgaggagttccttg 18733255
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 63      cgttcaaacttttttctttaaaaaa 87
               ||||||||||||||| |||||||||
Sbjct: 5100480 cgttcaaacttttttttttaaaaaa 5100504
to top
>gb|AC104667.5| Homo sapiens BAC clone RP11-810D14 from 2, complete sequence
          Length = 95682

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 68    aaacttttttctttaaaaaat 88
             |||||||||||||||||||||
Sbjct: 92757 aaacttttttctttaaaaaat 92737
to top
>gb|AC138973.2| Homo sapiens 3 BAC CTD-2532M17 (Cal Tech Human BAC Library D) complete
             sequence
          Length = 142430

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 79    tttaaaaaatcttgatccaaa 99
             |||||||||||||||||||||
Sbjct: 11785 tttaaaaaatcttgatccaaa 11765
to top
>dbj|AP004818.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0551A03
          Length = 173027

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 305    ccagatgaggagttccttgctcttgaccc 333
              |||||||||||| ||||||||||| ||||
Sbjct: 143522 ccagatgaggagctccttgctcttcaccc 143550
to top
>dbj|AP004809.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1018E06
          Length = 178499

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 305   ccagatgaggagttccttgctcttgaccc 333
             |||||||||||| ||||||||||| ||||
Sbjct: 14817 ccagatgaggagctccttgctcttcaccc 14845
to top
>dbj|AK122046.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114A14, full
           insert sequence
          Length = 779

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 305 ccagatgaggagttccttgctcttgaccc 333
           |||||||||||| ||||||||||| ||||
Sbjct: 398 ccagatgaggagctccttgctcttcaccc 370
to top
>dbj|AK063825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-A08, full
           insert sequence
          Length = 784

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 305 ccagatgaggagttccttgctcttgaccc 333
           |||||||||||| ||||||||||| ||||
Sbjct: 392 ccagatgaggagctccttgctcttcaccc 364
to top
>emb|AL670544.7| Mouse DNA sequence from clone RP23-16G8 on chromosome X, complete
             sequence
          Length = 236946

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 186   ttgccatcgtccactttgccgaagg 210
             |||||||| ||||||||||||||||
Sbjct: 99283 ttgccatcttccactttgccgaagg 99307
to top
>gb|AC154844.2| Mus musculus BAC clone RP23-46K13 from chromosome 16, complete sequence
          Length = 196946

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 72     ttttttctttaaaaaatctt 91
              ||||||||||||||||||||
Sbjct: 147945 ttttttctttaaaaaatctt 147926
to top
>gb|AC123618.26| Mus musculus chromosome 12, clone RP23-38N23, complete sequence
          Length = 201596

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    aaacttttttctttaaaaaa 87
             ||||||||||||||||||||
Sbjct: 46451 aaacttttttctttaaaaaa 46470
to top
>gb|AE016827.1| Mannheimia succiniciproducens MBEL55E, complete genome
          Length = 2314078

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 195     tccactttgccgaaggcgga 214
               ||||||||||||||||||||
Sbjct: 2101641 tccactttgccgaaggcgga 2101660
to top
>gb|AC107085.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1764_D01,
              complete sequence
          Length = 164709

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 135    gccacggcggcctccttgccgtcg 158
              |||| |||||||||||||||||||
Sbjct: 140296 gccagggcggcctccttgccgtcg 140319
to top
>ref|XM_586687.2| PREDICTED: Bos taurus similar to BTG2 protein (NGF-inducible
           protein TIS21) (LOC539364), mRNA
          Length = 2813

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 72  ttttttctttaaaaaatctt 91
           ||||||||||||||||||||
Sbjct: 856 ttttttctttaaaaaatctt 837
to top
>gb|BC056809.1| Danio rerio zgc:63728, mRNA (cDNA clone MGC:63728 IMAGE:2639363),
            complete cds
          Length = 2534

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 72   ttttttctttaaaaaatctt 91
            ||||||||||||||||||||
Sbjct: 2447 ttttttctttaaaaaatctt 2428
to top
>ref|NM_213504.1| Danio rerio zgc:63728 (zgc:63728), mRNA
          Length = 2534

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 72   ttttttctttaaaaaatctt 91
            ||||||||||||||||||||
Sbjct: 2447 ttttttctttaaaaaatctt 2428
to top
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 306    cagatgaggagttccttgctcttg 329
              ||||||| ||||||||||||||||
Sbjct: 268622 cagatgacgagttccttgctcttg 268645
to top
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 165    gcggtggcggggaccttggc 184
              ||||||||||||||||||||
Sbjct: 391736 gcggtggcggggaccttggc 391717
to top
>gb|AC124393.5| Mus musculus BAC clone RP24-331E1 from chromosome 18, complete sequence
          Length = 171769

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 64    gttcaaacttttttctttaaaaaa 87
             |||||||||||||| |||||||||
Sbjct: 33829 gttcaaacttttttttttaaaaaa 33806
to top
>gb|AC122517.2| Mus musculus BAC clone RP24-459G24 from chromosome 7, complete sequence
          Length = 186032

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     aaacttttttctttaaaaaa 87
              ||||||||||||||||||||
Sbjct: 123180 aaacttttttctttaaaaaa 123199
to top
>emb|Z81585.1|CET05E12 Caenorhabditis elegans Cosmid T05E12, complete sequence
          Length = 22278

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 74    ttttctttaaaaaatcttga 93
             ||||||||||||||||||||
Sbjct: 12037 ttttctttaaaaaatcttga 12018
to top
>gb|AC006972.2| Homo sapiens PAC clone RP4-799O8 from 7, complete sequence
          Length = 171537

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 70    acttttttctttaaaaaatcttga 93
             |||||||||||||| |||||||||
Sbjct: 84854 acttttttctttaacaaatcttga 84831
to top
>emb|AL449283.13| Human DNA sequence from clone RP11-386I23 on chromosome 1 Contains a
             GAJ protein pseudogene, complete sequence
          Length = 52920

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    aacttttttctttaaaaaat 88
             ||||||||||||||||||||
Sbjct: 45068 aacttttttctttaaaaaat 45087
to top
>emb|AL360227.17| Human DNA sequence from clone RP11-428F8 on chromosome 6 Contains the
             SLC16A10 gene for solute carrier family 16 (monocarboxylic
             acid transporters) member 10, the 3' part of a novel gene
             and a CpG island, complete sequence
          Length = 161938

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    aaacttttttctttaaaaaa 87
             ||||||||||||||||||||
Sbjct: 91386 aaacttttttctttaaaaaa 91367
to top
>gb|AC161511.3| Mus musculus chromosome 18, clone RP23-37O16, complete sequence
          Length = 186860

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 64     gttcaaacttttttctttaaaaaa 87
              |||||||||||||| |||||||||
Sbjct: 122060 gttcaaacttttttttttaaaaaa 122083
to top
>emb|CR548612.1| Paramecium tetraurelia macronuclear largest chromosome, complete sequence
          Length = 984602

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     tttctttaaaaaatcttgat 94
              ||||||||||||||||||||
Sbjct: 393293 tttctttaaaaaatcttgat 393312
to top
>gb|AC063923.21| Homo sapiens 3 BAC RP11-59E19 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 153448

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 72     ttttttctttaaaaaatctt 91
              ||||||||||||||||||||
Sbjct: 142387 ttttttctttaaaaaatctt 142406
to top
>emb|BX572630.10| Zebrafish DNA sequence from clone CH211-24O10 in linkage group 15,
              complete sequence
          Length = 174316

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 70     acttttttctttaaaaaatcttga 93
              |||||||||||||||| |||||||
Sbjct: 126915 acttttttctttaaaatatcttga 126892
to top
>gb|AC116099.2| Homo sapiens chromosome 1 clone RP11-338F23, complete sequence
          Length = 184007

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 70    acttttttctttaaaaaatcttga 93
             |||||||||||||| |||||||||
Sbjct: 89144 acttttttctttaacaaatcttga 89121
to top
>gb|AC112138.3| Homo sapiens 3 BAC RP11-715D1 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 133897

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 72     ttttttctttaaaaaatctt 91
              ||||||||||||||||||||
Sbjct: 133119 ttttttctttaaaaaatctt 133100
to top
>gb|AC100773.2| Homo sapiens chromosome 11, clone RP11-960D24, complete sequence
          Length = 199549

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 65     ttcaaacttttttctttaaaaaat 88
              ||||||| ||||||||||||||||
Sbjct: 187543 ttcaaacatttttctttaaaaaat 187566
to top
>emb|BX294000.11| Zebrafish DNA sequence from clone DKEYP-67B10, complete sequence
          Length = 197371

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 70    acttttttctttaaaaaatcttga 93
             |||||||||||||||| |||||||
Sbjct: 47417 acttttttctttaaaatatcttga 47394
to top
>emb|BX465186.11| Zebrafish DNA sequence from clone DKEY-106M10 in linkage group 10,
             complete sequence
          Length = 247227

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    ttttttctttaaaaaatctt 91
             ||||||||||||||||||||
Sbjct: 11745 ttttttctttaaaaaatctt 11764
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 65       ttcaaacttttttctttaaa 84
                ||||||||||||||||||||
Sbjct: 26352392 ttcaaacttttttctttaaa 26352373



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 65       ttcaaacttttttctttaaa 84
                ||||||||||||||||||||
Sbjct: 23499733 ttcaaacttttttctttaaa 23499714



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 65      ttcaaacttttttctttaaa 84
               ||||||||||||||||||||
Sbjct: 8447378 ttcaaacttttttctttaaa 8447397



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 65      ttcaaacttttttctttaaa 84
               ||||||||||||||||||||
Sbjct: 4421867 ttcaaacttttttctttaaa 4421886
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 65       ttcaaacttttttctttaaa 84
                ||||||||||||||||||||
Sbjct: 13935096 ttcaaacttttttctttaaa 13935115
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 135      gccacggcggcctccttgccgtcg 158
                |||| |||||||||||||||||||
Sbjct: 18972918 gccagggcggcctccttgccgtcg 18972941
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 65       ttcaaacttttttctttaaa 84
                ||||||||||||||||||||
Sbjct: 29380865 ttcaaacttttttctttaaa 29380846



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 65       ttcaaacttttttctttaaa 84
                ||||||||||||||||||||
Sbjct: 11747917 ttcaaacttttttctttaaa 11747898
to top
>gb|AC116616.5| Homo sapiens BAC clone RP11-51M24 from 4, complete sequence
          Length = 94560

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    tcaaacttttttctttaaaa 85
             ||||||||||||||||||||
Sbjct: 62232 tcaaacttttttctttaaaa 62213
to top
>gb|AC009236.4| Homo sapiens BAC clone RP11-421J10 from 2, complete sequence
          Length = 178911

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 67   caaacttttttctttaaaaaatcttgat 94
            ||||||| |||||| |||||||||||||
Sbjct: 2811 caaacttatttcttaaaaaaatcttgat 2784
to top
>gb|AC084321.37| Mus musculus strain C57BL/6J chromosome 7 clone rp23-316h18, complete
             sequence
          Length = 176639

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    aaacttttttctttaaaaaa 87
             ||||||||||||||||||||
Sbjct: 39584 aaacttttttctttaaaaaa 39603
to top
>gb|AC008121.43| Homo sapiens 12 BAC RP11-407N8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 105989

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    aacttttttctttaaaaaat 88
             ||||||||||||||||||||
Sbjct: 54267 aacttttttctttaaaaaat 54286
to top
>dbj|AP003309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0036G09
          Length = 124118

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    ttcaaacttttttctttaaa 84
             ||||||||||||||||||||
Sbjct: 94753 ttcaaacttttttctttaaa 94772
to top
>dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1060H01
          Length = 157987

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    ttcaaacttttttctttaaa 84
             ||||||||||||||||||||
Sbjct: 54426 ttcaaacttttttctttaaa 54445
to top
>gb|AC067990.12| Homo sapiens chromosome 11, clone RP11-682M10, complete sequence
          Length = 92815

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 65    ttcaaacttttttctttaaaaaat 88
             ||||||| ||||||||||||||||
Sbjct: 30968 ttcaaacatttttctttaaaaaat 30991
to top
>dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1311_H06
          Length = 139868

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    ttcaaacttttttctttaaa 84
             ||||||||||||||||||||
Sbjct: 31737 ttcaaacttttttctttaaa 31718
to top
>dbj|AP005492.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0077L03
          Length = 171177

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 304   tccagatgaggagttccttg 323
             ||||||||||||||||||||
Sbjct: 59025 tccagatgaggagttccttg 59006
to top
>dbj|AP005421.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0435D08
          Length = 148912

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    ttcaaacttttttctttaaa 84
             ||||||||||||||||||||
Sbjct: 88773 ttcaaacttttttctttaaa 88792
to top
>dbj|AP005321.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0650H04
          Length = 134533

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    ttcaaacttttttctttaaa 84
             ||||||||||||||||||||
Sbjct: 37570 ttcaaacttttttctttaaa 37589
to top
>dbj|AP005310.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0477B05
          Length = 142166

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    ttcaaacttttttctttaaa 84
             ||||||||||||||||||||
Sbjct: 55807 ttcaaacttttttctttaaa 55788
to top
>gb|AC006384.2|AC006384 Homo sapiens BAC clone RP11-557I6 from 7q11.23-q21.1, complete sequence
          Length = 128959

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 70    acttttttctttaaaaaatcttga 93
             |||||||||||||| |||||||||
Sbjct: 49007 acttttttctttaacaaatcttga 49030
to top
>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome
          Length = 1664970

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 72     ttttttctttaaaaaatctt 91
              ||||||||||||||||||||
Sbjct: 744799 ttttttctttaaaaaatctt 744818
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 65       ttcaaacttttttctttaaa 84
                ||||||||||||||||||||
Sbjct: 26280561 ttcaaacttttttctttaaa 26280542



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 65       ttcaaacttttttctttaaa 84
                ||||||||||||||||||||
Sbjct: 23427924 ttcaaacttttttctttaaa 23427905



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 65      ttcaaacttttttctttaaa 84
               ||||||||||||||||||||
Sbjct: 8447261 ttcaaacttttttctttaaa 8447280



 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 65      ttcaaacttttttctttaaa 84
               ||||||||||||||||||||
Sbjct: 4421848 ttcaaacttttttctttaaa 4421867
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>emb|AL954157.3|CNS08CCV Oryza sativa chromosome 12, . BAC OSJNBa0042N11 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 168699

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    ttcaaacttttttctttaaa 84
             ||||||||||||||||||||
Sbjct: 82629 ttcaaacttttttctttaaa 82610
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>emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb0016A10 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 133978

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 65     ttcaaacttttttctttaaa 84
              ||||||||||||||||||||
Sbjct: 116376 ttcaaacttttttctttaaa 116357
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>emb|AL845347.4|CNS08CB9 Oryza sativa chromosome 12, . BAC OSJNBb0101I10 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 131689

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    ttcaaacttttttctttaaa 84
             ||||||||||||||||||||
Sbjct: 66665 ttcaaacttttttctttaaa 66646
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>emb|AL845346.4|CNS08CB8 Oryza sativa chromosome 12, . BAC OSJNBa0018E22 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 69273

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    ttcaaacttttttctttaaa 84
             ||||||||||||||||||||
Sbjct: 20281 ttcaaacttttttctttaaa 20262
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>emb|BX001060.3|CNS08CE8 Oryza sativa chromosome 12, . BAC OSJNBa0056M17 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 178147

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 65    ttcaaacttttttctttaaa 84
             ||||||||||||||||||||
Sbjct: 29850 ttcaaacttttttctttaaa 29831
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>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 162261

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 65   ttcaaacttttttctttaaa 84
            ||||||||||||||||||||
Sbjct: 2425 ttcaaacttttttctttaaa 2444
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>emb|AL928775.2|CNS08CC5 Oryza sativa chromosome 12, . BAC OSJNBa0030N06 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 146444

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    ttcaaacttttttctttaaa 84
             ||||||||||||||||||||
Sbjct: 54041 ttcaaacttttttctttaaa 54060
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>gb|U00090.1| Rhizobium sp. NGR234 plasmid pNGR234a, complete sequence
          Length = 536165

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    tacttggccacggcggcctc 148
              ||||||||||||||||||||
Sbjct: 221031 tacttggccacggcggcctc 221050
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 262     tggaggggtcatccttgtcg 281
               ||||||||||||||||||||
Sbjct: 3107118 tggaggggtcatccttgtcg 3107137


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,359,619
Number of Sequences: 3902068
Number of extensions: 3359619
Number of successful extensions: 90462
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 89594
Number of HSP's gapped (non-prelim): 861
length of query: 333
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 311
effective length of database: 17,147,199,772
effective search space: 5332779129092
effective search space used: 5332779129092
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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