| Clone Name | rbags15m17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC140433.3| Mus musculus BAC clone RP23-96L16 from chromosome 16, complete sequence Length = 231593 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 gacacatagcacacatatc 45 ||||||||||||||||||| Sbjct: 185843 gacacatagcacacatatc 185861
>gb|AC121818.3| Mus musculus BAC clone RP23-459J16 from chromosome 16, complete sequence Length = 199539 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 gacacatagcacacatatc 45 ||||||||||||||||||| Sbjct: 92276 gacacatagcacacatatc 92294
>emb|AL451006.6| Human DNA sequence from clone RP11-216M14 on chromosome 1, complete sequence Length = 93119 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 25 tagacacatagcacacata 43 ||||||||||||||||||| Sbjct: 71214 tagacacatagcacacata 71232
>emb|AL353143.14| Human DNA sequence from clone RP11-383F12 on chromosome 13 Contains part of a novel gene (including KIAA0865), possible ortholog of rat myosin heavy chain Myr 8 (Loc192253) and a novel gene, complete sequence Length = 170276 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 gatcacatatattctgaat 19 ||||||||||||||||||| Sbjct: 141409 gatcacatatattctgaat 141391
>gb|AC107960.3| Homo sapiens chromosome 8, clone RP11-983C19, complete sequence Length = 180854 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 gatcacatatattctgaat 19 ||||||||||||||||||| Sbjct: 172134 gatcacatatattctgaat 172152
>gb|AC021945.14| Homo sapiens chromosome 8, clone RP11-85I17, complete sequence Length = 108780 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 gatcacatatattctgaat 19 ||||||||||||||||||| Sbjct: 19385 gatcacatatattctgaat 19403
>emb|CR847870.16| Zebrafish DNA sequence from clone DKEY-170G11 in linkage group 22, complete sequence Length = 237985 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2 atcacatatattctgaatg 20 ||||||||||||||||||| Sbjct: 197219 atcacatatattctgaatg 197237
>gb|CP000224.1| Drosophila melanogaster genomic scaffold 211000022280794 Length = 474727 Score = 38.2 bits (19), Expect = 2.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 28 acacatagcacacatatcc 46 ||||||||||||||||||| Sbjct: 183235 acacatagcacacatatcc 183217
>gb|AC121873.3| Mus musculus BAC clone RP24-123L3 from chromosome 19, complete sequence Length = 209035 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Plus Query: 24 ctagacacatagcacaca 41 |||||||||||||||||| Sbjct: 113622 ctagacacatagcacaca 113639
>gb|AC129416.1| Homo sapiens 12 BAC RP11-464G3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 139995 Score = 36.2 bits (18), Expect = 9.1 Identities = 18/18 (100%) Strand = Plus / Minus Query: 8 tatattctgaatgggtct 25 |||||||||||||||||| Sbjct: 125997 tatattctgaatgggtct 125980
>gb|AC091205.3| Drosophila melanogaster 3L BAC RP98-22N9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170836 Score = 36.2 bits (18), Expect = 9.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 25 tagacacatagcacacatatcc 46 |||||||| ||||||||||||| Sbjct: 99709 tagacacacagcacacatatcc 99688
>gb|AC010109.6| Drosophila melanogaster 3L BAC RP98-9B4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167675 Score = 36.2 bits (18), Expect = 9.1 Identities = 21/22 (95%) Strand = Plus / Minus Query: 25 tagacacatagcacacatatcc 46 |||||||| ||||||||||||| Sbjct: 146217 tagacacacagcacacatatcc 146196
>gb|AE003478.3| Drosophila melanogaster chromosome 3L, section 12 of 83 of the complete sequence Length = 317354 Score = 36.2 bits (18), Expect = 9.1 Identities = 21/22 (95%) Strand = Plus / Plus Query: 25 tagacacatagcacacatatcc 46 |||||||| ||||||||||||| Sbjct: 111954 tagacacacagcacacatatcc 111975
>gb|AC004356.1|AC004356 Drosophila melanogaster DNA sequence (P1 DS01105 (D259)), complete sequence Length = 71343 Score = 36.2 bits (18), Expect = 9.1 Identities = 21/22 (95%) Strand = Plus / Plus Query: 25 tagacacatagcacacatatcc 46 |||||||| ||||||||||||| Sbjct: 55651 tagacacacagcacacatatcc 55672 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 329,255 Number of Sequences: 3902068 Number of extensions: 329255 Number of successful extensions: 21741 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 21723 Number of HSP's gapped (non-prelim): 18 length of query: 62 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 41 effective length of database: 17,151,101,840 effective search space: 703195175440 effective search space used: 703195175440 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)