| Clone Name | rbags15m15 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | SYFB_SYMTH (Q67QF2) Phenylalanyl-tRNA synthetase beta chain (EC ... | 29 | 3.7 |
|---|
>SYFB_SYMTH (Q67QF2) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)| (Phenylalanine--tRNA ligase beta chain) (PheRS) Length = 892 Score = 28.9 bits (63), Expect = 3.7 Identities = 16/36 (44%), Positives = 17/36 (47%) Frame = -2 Query: 237 GVLVDGAVDGA*LPXGEVQGDXHLKTFSSWACLCCE 130 G LV AV GA LP G G L+ S LC E Sbjct: 87 GALVPAAVPGAKLPGGVTMGVKKLRGLDSHGMLCSE 122 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 32,916,022 Number of Sequences: 219361 Number of extensions: 491803 Number of successful extensions: 1152 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 1030 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1152 length of database: 80,573,946 effective HSP length: 57 effective length of database: 68,070,369 effective search space used: 1633688856 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)