>VENV_FOWPV (P36316) Major envelope protein (43 kDa protein) (p43K)|
          Length = 377

 Score = 30.8 bits (68), Expect = 0.87
 Identities = 10/28 (35%), Positives = 21/28 (75%)
 Frame = +2

Query: 215 CCHVNT*PQGSSIINRLLGLLSRTHCFL 298
           CC+++T P+G+ I+NRL+ + S+   ++
Sbjct: 54  CCNLSTNPEGTDILNRLIDVSSKVSVYI 81

>YCF1_ARATH (P56785) Hypothetical 213.7 kDa protein ycf1|
          Length = 1786

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
 Frame = +3

Query: 21  NKTVFVRKYIVMFL--HVLRLAMVG-AQIWIRPSQSLKTPKTYRSNLFK 158
           NK +FV    V +L  H+L +  VG   +WI+ + S+++    RSN +K
Sbjct: 166 NKMLFVTSSFVGWLIGHILFMKWVGLVLVWIQQNNSIRSNVVIRSNKYK 214

>TONB_PSEAE (Q51368) Protein tonB|
          Length = 342

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
 Frame = +3

Query: 69  LRLAMVGAQIWIRPSQSL------KTPKTYRSNLFKLT*CGSMVLQPPAA 200
           + +A++GA +W+ P+ +       + PKT + N  +L        QPPAA
Sbjct: 97  MHVAIIGALVWVMPTPAELNLGHGELPKTMQVNFVQLEKKAEPTPQPPAA 146

>DPOLA_OXYTR (Q27152) DNA polymerase alpha catalytic subunit (EC 2.7.7.7)|
          Length = 1513

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 90  LPPLPNAVHVKTSRCIFGRTR 28
           +PPLP+ +   T  CIFG T+
Sbjct: 475 MPPLPSTIQGNTFECIFGSTQ 495

>HSP6C_DROME (P22979) Heat shock protein 67B3 (Heat shock 18 kDa protein)|
          Length = 169

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -3

Query: 203 VGGWRLQYHGPTLS 162
           VGGW  QYHG T+S
Sbjct: 144 VGGWSSQYHGSTIS 157

>ARGE_SHIFL (P59600) Acetylornithine deacetylase (EC 3.5.1.16)|
           (Acetylornithinase) (AO) (N-acetylornithinase) (NAO)
          Length = 383

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = +2

Query: 158 VNLMWVHGTAAASRQLVSRCC--HVNT*PQGSSIINRLLGLLS 280
           +NL  +HG  A++R  +  CC  H++  PQ    +N L GLL+
Sbjct: 239 LNLGHIHGGDASNR--ICACCELHMDIRPQPGMTLNELNGLLN 279

>ARCA_BURPS (Q63U73) Arginine deiminase (EC 3.5.3.6) (ADI) (Arginine|
           dihydrolase) (AD)
          Length = 418

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
 Frame = -2

Query: 105 ESKFVLPPLPNAVHVKTSRC-IFG 37
           +S FVLPPLPN +  + + C I+G
Sbjct: 150 KSSFVLPPLPNMMFTRDTSCWIYG 173

>ARCA_BURMA (Q62KD9) Arginine deiminase (EC 3.5.3.6) (ADI) (Arginine|
           dihydrolase) (AD)
          Length = 418

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
 Frame = -2

Query: 105 ESKFVLPPLPNAVHVKTSRC-IFG 37
           +S FVLPPLPN +  + + C I+G
Sbjct: 150 KSSFVLPPLPNMMFTRDTSCWIYG 173

>THIC_BACTN (Q8AA15) Thiamine biosynthesis protein thiC|
          Length = 565

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 9/22 (40%), Positives = 17/22 (77%)
 Frame = -3

Query: 158 LEEIASISFRGFKRLARPNPNL 93
           +E++ S+SF G +++A PNP +
Sbjct: 30  VEQVPSVSFEGEEKIATPNPEV 51

>PDE3B_HUMAN (Q13370) cGMP-inhibited 3',5'-cyclic phosphodiesterase B (EC|
           3.1.4.17) (Cyclic GMP-inhibited phosphodiesterase B)
           (CGI-PDE B) (CGIPDE1) (CGIP1)
          Length = 1112

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 11/27 (40%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
 Frame = +1

Query: 55  CFYM--YCVWQWWEHKFGFGRANLLKP 129
           C Y+  + VWQWW   +G G A    P
Sbjct: 160 CCYLGDFLVWQWWSWPWGDGDAGSAAP 186

>RHL_MACMU (Q28849) RH-like protein (Rhesus-like protein)|
          Length = 416

 Score = 27.3 bits (59), Expect = 9.6
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = +2

Query: 155 QVNLMWVHGTAAASRQLVSRCCHVNT*PQGSSIINRLLGLLS 280
           ++N+ ++H  A A    +S  CHV   P  + ++  + GL+S
Sbjct: 263 KINMTYMHNAALAGGVALSASCHVIHSPWIAMVLGLVAGLIS 304


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,412,783
Number of Sequences: 219361
Number of extensions: 855798
Number of successful extensions: 1826
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1826
length of database: 80,573,946
effective HSP length: 89
effective length of database: 61,050,817
effective search space used: 1465219608
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)