ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags16b06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478818.1| Oryza sativa (japonica cultivar-group), mRNA 244 3e-61
2gb|AY110830.1| Zea mays CL4092_1 mRNA sequence 194 3e-46
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 123 8e-25
4dbj|AP003758.4| Oryza sativa (japonica cultivar-group) genomic D... 123 8e-25
5dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic D... 123 8e-25
6gb|AY112241.1| Zea mays CL4092_-2 mRNA sequence 92 3e-15
7gb|AC093763.3| Homo sapiens BAC clone RP11-91J3 from 4, complete... 54 6e-04
8gb|AF548005.1| Azoarcus evansii aerobic benzoate degradation gen... 48 0.036
9emb|AL442126.6| Human DNA sequence from clone RP11-409J23 on chr... 42 2.2
10emb|AL359842.14| Human DNA sequence from clone RP11-388D4 on chr... 42 2.2
11gb|AC160555.4| Mus musculus chromosome 5, clone RP23-387L12, com... 42 2.2
12dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
13dbj|AP002536.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
14dbj|AK109271.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
15emb|CR792454.8| Zebrafish DNA sequence from clone CH211-9F20 in ... 42 2.2
16gb|AC025501.19| Mus musculus chromosome 10, clone RP23-129O23, c... 40 8.8
17ref|NM_121987.2| Arabidopsis thaliana EMB2734; lyase AT5G19820 (... 40 8.8
18gb|AY790940.1| Homo sapiens insulin-like growth factor 1 (somato... 40 8.8
19gb|AC159127.8| Mus musculus chromosome 3, clone RP24-214E8, comp... 40 8.8
20gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence 40 8.8
21gb|AC007863.15| Trypanosoma brucei chromosome 6 clone RPCI93-26G... 40 8.8
22gb|AC166486.5| Mus musculus chromosome 1, clone RP23-187M9, comp... 40 8.8
23gb|AC150993.4| Bos taurus BAC CH240-186K21 (Children's Hospital... 40 8.8
24gb|AC120403.8| Mus musculus chromosome 17, clone RP24-405C18, co... 40 8.8
25emb|AJ853849.1| Sus scrofa PRSS11 gene (partial), DMBT1 gene, AW... 40 8.8
26emb|CR940306.3| M.truncatula DNA sequence from clone MTH2-10B11 ... 40 8.8
27ref|XM_803717.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.8
28ref|XM_805808.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.8
29gb|AC107368.11| Mus musculus chromosome 3, clone RP23-243N8, com... 40 8.8
30gb|AC123074.2| Mus musculus BAC clone RP23-168H19 from 10, compl... 40 8.8
31gb|AC124766.3| Mus musculus BAC clone RP23-204I12 from 1, comple... 40 8.8
32gb|AC147472.17| Medicago truncatula clone mth2-24n18, complete s... 40 8.8
33emb|AL079342.17|HSDJ72A23 Human DNA sequence from clone RP1-72A2... 40 8.8
34emb|AL035401.23|HS209A6 Human DNA sequence from clone RP1-209A6 ... 40 8.8
35gb|AY051083.1| Arabidopsis thaliana unknown protein (At5g19820) ... 40 8.8
36gb|AY035044.1| Arabidopsis thaliana unknown protein (At5g19820) ... 40 8.8
37emb|AL035477.6|PFMAL4P4 Plasmodium falciparum MAL4P4 40 8.8
38gb|AY649844.2| Schistosoma mansoni insulin receptor tyrosine kin... 40 8.8
39gb|AC108050.5| Homo sapiens BAC clone RP11-331M18 from 4, comple... 40 8.8
40gb|AC113370.2| Homo sapiens chromosome 5 clone RP11-124O5, compl... 40 8.8
41gb|AC109469.2| Homo sapiens chromosome 5 clone RP11-349F8, compl... 40 8.8
42gb|AC109480.3| Homo sapiens chromosome 5 clone RP11-455B3, compl... 40 8.8
43gb|AC010202.6| Homo sapiens 12q BAC RP11-210L7 (Roswell Park Can... 40 8.8
44gb|AC027104.6| Homo sapiens chromosome 15, clone RP11-326L17, co... 40 8.8
45dbj|AK034789.1| Mus musculus 12 days embryo embryonic body betwe... 40 8.8
46gb|AF532111.1| Mus musculus strain 129/SvJ BAC clone citb10i1 fr... 40 8.8
47gb|AY260957.1| Homo sapiens insulin-like growth factor 1 (somato... 40 8.8
48gb|AC011737.10| Homo sapiens BAC clone RP11-33N4 from 2, complet... 40 8.8
49gb|AF296838.1|T29J13 Arabidopsis thaliana BAC T29J13 40 8.8
50emb|CR974472.7| Mouse DNA sequence from clone RP24-120D11 on chr... 40 8.8
51gb|AC142415.4| Mus musculus BAC clone RP23-155F24 from 10, compl... 40 8.8
52emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 40 8.8
53gb|AC156016.2| Mus musculus BAC clone RP24-320A12 from chromosom... 40 8.8
54gb|AC155343.1| Brassica rapa subsp. pekinensis chromosome Cytoge... 40 8.8
55emb|AL603792.12| Mouse DNA sequence from clone RP23-328B4 on chr... 40 8.8 
>ref|XM_478818.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3372

 Score =  244 bits (123), Expect = 3e-61
 Identities = 255/299 (85%)
 Strand = Plus / Minus

                                                                        
Query: 341  atggactgtagcatgagctgctgctgtggttgcaaggtggaaaatgttgacgcaagaaaa 400
            |||||||| ||||  ||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 3359 atggactgcagcagaagctgctgctgtggttgcaagctggaaaatgttgaggcaagaaaa 3300

                                                                        
Query: 401  tcaggtggcagtgtctgctgaaaccgcttcagaacattgatcatccgggtggtagtttca 460
            || ||||||| ||||||||| || ||| |||  | ||||| ||||||  |||| ||||||
Sbjct: 3299 tctggtggcaatgtctgctggaaacgcctcaagagattgaccatccgcttggttgtttca 3240

                                                                        
Query: 461  tctgttgcaagctcctttccattgcacagaacctcagcaaaaatagaaactattttagga 520
            ||||| ||||||||  |||| ||||| | |||||| |||||||| ||||| ||||| |||
Sbjct: 3239 tctgtagcaagctctgttccgttgcataaaacctccgcaaaaattgaaacaatttttgga 3180

                                                                        
Query: 521  agatactgactgtgaggtccaagaaccagtgcatccgatctctccaccattgaacaaagc 580
            ||||| || || ||||| |||||||    |||||||||||| || ||||||||  | |||
Sbjct: 3179 agatattggctatgaggaccaagaatatctgcatccgatctttcaaccattgaggagagc 3120

                                                                       
Query: 581  tgatcatgcacgacttttgcttcaatcttgtcatcttttataggcaagcagccaagcca 639
            ||||| || || |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 3119 tgatcgtgtacaacttttgcttcaatcttgtcatcttttataggcaagcaaccaagcca 3061
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>gb|AY110830.1| Zea mays CL4092_1 mRNA sequence
          Length = 1007

 Score =  194 bits (98), Expect = 3e-46
 Identities = 264/321 (82%)
 Strand = Plus / Plus

                                                                       
Query: 326 aactatgtggataggatggactgtagcatgagctgctgctgtggttgcaaggtggaaaat 385
           |||||||| || | ||||||||||||||  ||||| ||||| ||||||||| ||||||| 
Sbjct: 312 aactatgtcgacaagatggactgtagcagtagctgttgctgcggttgcaagttggaaaac 371

                                                                       
Query: 386 gttgacgcaagaaaatcaggtggcagtgtctgctgaaaccgcttcagaacattgatcatc 445
           || || |||||||||||||| ||||  |||||||| || ||| |||  ||||| | ||||
Sbjct: 372 gtcgatgcaagaaaatcaggaggcaaagtctgctggaaacgcctcaagacattcaccatc 431

                                                                       
Query: 446 cgggtggtagtttcatctgttgcaagctcctttccattgcacagaacctcagcaaaaata 505
           | | |  |||||||||| || ||||| ||  |||||||||||| |||||| ||     | 
Sbjct: 432 ctgtttctagtttcatcagtggcaagttctgttccattgcacaaaacctctgcnnnnntt 491

                                                                       
Query: 506 gaaactattttaggaagatactgactgtgaggtccaagaaccagtgcatccgatctctcc 565
           ||||| |||||||||||||||||||||||||| |||||||     |||||||| ||||||
Sbjct: 492 gaaacaattttaggaagatactgactgtgaggcccaagaatttcagcatccgacctctcc 551

                                                                       
Query: 566 accattgaacaaagctgatcatgcacgacttttgcttcaatcttgtcatcttttataggc 625
           ||||| || ||||||||  |||| || ||||| ||||||| |||||| ||||||||||||
Sbjct: 552 accatggagcaaagctgtccatgtacaactttagcttcaaccttgtcgtcttttataggc 611

                                
Query: 626 aagcagccaagccatgctgga 646
           ||||||| |||||| ||||||
Sbjct: 612 aagcagctaagccaggctgga 632
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  123 bits (62), Expect = 8e-25
 Identities = 116/134 (86%)
 Strand = Plus / Plus

                                                                            
Query: 341      atggactgtagcatgagctgctgctgtggttgcaaggtggaaaatgttgacgcaagaaaa 400
                |||||||| ||||  ||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 23203179 atggactgcagcagaagctgctgctgtggttgcaagctggaaaatgttgaggcaagaaaa 23203238

                                                                            
Query: 401      tcaggtggcagtgtctgctgaaaccgcttcagaacattgatcatccgggtggtagtttca 460
                || ||||||| ||||||||| || ||| |||  | ||||| ||||||  |||| ||||||
Sbjct: 23203239 tctggtggcaatgtctgctggaaacgcctcaagagattgaccatccgcttggttgtttca 23203298

                              
Query: 461      tctgttgcaagctc 474
                ||||| ||||||||
Sbjct: 23203299 tctgtagcaagctc 23203312



 Score =  111 bits (56), Expect = 3e-21
 Identities = 136/158 (86%), Gaps = 6/158 (3%)
 Strand = Plus / Plus

                                                                            
Query: 119      cccaaaatcatatttgaatacaagataatatacac--tctacatcaaaaaccatatggaa 176
                ||||||| ||||| ||| |||||||||||||||||  |||||||||||| ||||||| ||
Sbjct: 23202954 cccaaaaccatatctgagtacaagataatatacacactctacatcaaaa-ccatatgaaa 23203012

                                                                            
Query: 177      tggcgaccaccaatcccttgaagcgaccaatgc--atgcacaaatgaactcccccagaat 234
                |||| ||| ||||| ||||||||| | ||||||  || ||||||||||||| |||| || 
Sbjct: 23203013 tggcaacctccaattccttgaagccagcaatgcgcattcacaaatgaactcacccacaa- 23203071

                                                      
Query: 235      aagattcaacacaaaaaattggttgacagtaccaatga 272
                | ||||||||||||| ||||||||||| ||| ||||||
Sbjct: 23203072 atgattcaacacaaagaattggttgacggtaacaatga 23203109



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 58/62 (93%)
 Strand = Plus / Plus

                                                                            
Query: 578      agctgatcatgcacgacttttgcttcaatcttgtcatcttttataggcaagcagccaagc 637
                |||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 23203789 agctgatcgtgtacaacttttgcttcaatcttgtcatcttttataggcaagcaaccaagc 23203848

                  
Query: 638      ca 639
                ||
Sbjct: 23203849 ca 23203850
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>dbj|AP003758.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1562_B11
          Length = 112144

 Score =  123 bits (62), Expect = 8e-25
 Identities = 116/134 (86%)
 Strand = Plus / Plus

                                                                         
Query: 341   atggactgtagcatgagctgctgctgtggttgcaaggtggaaaatgttgacgcaagaaaa 400
             |||||||| ||||  ||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 66093 atggactgcagcagaagctgctgctgtggttgcaagctggaaaatgttgaggcaagaaaa 66152

                                                                         
Query: 401   tcaggtggcagtgtctgctgaaaccgcttcagaacattgatcatccgggtggtagtttca 460
             || ||||||| ||||||||| || ||| |||  | ||||| ||||||  |||| ||||||
Sbjct: 66153 tctggtggcaatgtctgctggaaacgcctcaagagattgaccatccgcttggttgtttca 66212

                           
Query: 461   tctgttgcaagctc 474
             ||||| ||||||||
Sbjct: 66213 tctgtagcaagctc 66226



 Score =  111 bits (56), Expect = 3e-21
 Identities = 136/158 (86%), Gaps = 6/158 (3%)
 Strand = Plus / Plus

                                                                         
Query: 119   cccaaaatcatatttgaatacaagataatatacac--tctacatcaaaaaccatatggaa 176
             ||||||| ||||| ||| |||||||||||||||||  |||||||||||| ||||||| ||
Sbjct: 65868 cccaaaaccatatctgagtacaagataatatacacactctacatcaaaa-ccatatgaaa 65926

                                                                         
Query: 177   tggcgaccaccaatcccttgaagcgaccaatgc--atgcacaaatgaactcccccagaat 234
             |||| ||| ||||| ||||||||| | ||||||  || ||||||||||||| |||| || 
Sbjct: 65927 tggcaacctccaattccttgaagccagcaatgcgcattcacaaatgaactcacccacaa- 65985

                                                   
Query: 235   aagattcaacacaaaaaattggttgacagtaccaatga 272
             | ||||||||||||| ||||||||||| ||| ||||||
Sbjct: 65986 atgattcaacacaaagaattggttgacggtaacaatga 66023



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 58/62 (93%)
 Strand = Plus / Plus

                                                                         
Query: 578   agctgatcatgcacgacttttgcttcaatcttgtcatcttttataggcaagcagccaagc 637
             |||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 66703 agctgatcgtgtacaacttttgcttcaatcttgtcatcttttataggcaagcaaccaagc 66762

               
Query: 638   ca 639
             ||
Sbjct: 66763 ca 66764
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>dbj|AP003845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1699_E05
          Length = 170666

 Score =  123 bits (62), Expect = 8e-25
 Identities = 116/134 (86%)
 Strand = Plus / Plus

                                                                          
Query: 341    atggactgtagcatgagctgctgctgtggttgcaaggtggaaaatgttgacgcaagaaaa 400
              |||||||| ||||  ||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 147363 atggactgcagcagaagctgctgctgtggttgcaagctggaaaatgttgaggcaagaaaa 147422

                                                                          
Query: 401    tcaggtggcagtgtctgctgaaaccgcttcagaacattgatcatccgggtggtagtttca 460
              || ||||||| ||||||||| || ||| |||  | ||||| ||||||  |||| ||||||
Sbjct: 147423 tctggtggcaatgtctgctggaaacgcctcaagagattgaccatccgcttggttgtttca 147482

                            
Query: 461    tctgttgcaagctc 474
              ||||| ||||||||
Sbjct: 147483 tctgtagcaagctc 147496



 Score =  111 bits (56), Expect = 3e-21
 Identities = 136/158 (86%), Gaps = 6/158 (3%)
 Strand = Plus / Plus

                                                                          
Query: 119    cccaaaatcatatttgaatacaagataatatacac--tctacatcaaaaaccatatggaa 176
              ||||||| ||||| ||| |||||||||||||||||  |||||||||||| ||||||| ||
Sbjct: 147138 cccaaaaccatatctgagtacaagataatatacacactctacatcaaaa-ccatatgaaa 147196

                                                                          
Query: 177    tggcgaccaccaatcccttgaagcgaccaatgc--atgcacaaatgaactcccccagaat 234
              |||| ||| ||||| ||||||||| | ||||||  || ||||||||||||| |||| || 
Sbjct: 147197 tggcaacctccaattccttgaagccagcaatgcgcattcacaaatgaactcacccacaa- 147255

                                                    
Query: 235    aagattcaacacaaaaaattggttgacagtaccaatga 272
              | ||||||||||||| ||||||||||| ||| ||||||
Sbjct: 147256 atgattcaacacaaagaattggttgacggtaacaatga 147293



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 58/62 (93%)
 Strand = Plus / Plus

                                                                          
Query: 578    agctgatcatgcacgacttttgcttcaatcttgtcatcttttataggcaagcagccaagc 637
              |||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 147973 agctgatcgtgtacaacttttgcttcaatcttgtcatcttttataggcaagcaaccaagc 148032

                
Query: 638    ca 639
              ||
Sbjct: 148033 ca 148034
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>gb|AY112241.1| Zea mays CL4092_-2 mRNA sequence
          Length = 483

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 77/88 (87%)
 Strand = Plus / Plus

                                                                       
Query: 559 tctctccaccattgaacaaagctgatcatgcacgacttttgcttcaatcttgtcatcttt 618
           |||||||||||| || ||||||||  |||| || ||||| ||||||| |||||| |||||
Sbjct: 186 tctctccaccatggagcaaagctgnccatgnacaactttagcttcaaccttgtcgtcttt 245

                                       
Query: 619 tataggcaagcagccaagccatgctgga 646
           |||||||||||||| |||||| ||||||
Sbjct: 246 tataggcaagcagctaagccaggctgga 273



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 139/170 (81%)
 Strand = Plus / Plus

                                                                       
Query: 326 aactatgtggataggatggactgtagcatgagctgctgctgtggttgcaaggtggaaaat 385
           |||||||| || | ||||||||||||||  ||||| ||||| ||||||||| ||||||| 
Sbjct: 18  aactatgtcgacaagatggactgtagcagtagctggtgctgcggttgcaagttggaaaac 77

                                                                       
Query: 386 gttgacgcaagaaaatcaggtggcagtgtctgctgaaaccgcttcagaacattgatcatc 445
           || || |||||||||||||| ||||  |||||||| || ||| |||  ||||| | ||||
Sbjct: 78  gtcgatgcaagaaaatcaggaggcaaagtctgctggaaacgcctcaagacattcaccatc 137

                                                             
Query: 446 cgggtggtagtttcatctgttgcaagctcctttccattgcacagaacctc 495
           | | |  |||||||||| || ||||| ||  |||||||||||| ||||||
Sbjct: 138 ctgtttctagtttcatcagtggcaagttctgttccattgcacaaaacctc 187
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>gb|AC093763.3| Homo sapiens BAC clone RP11-91J3 from 4, complete sequence
          Length = 154684

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                         
Query: 499    aaaaatagaaactattttaggaagata 525
              |||||||||||||||||||||||||||
Sbjct: 144710 aaaaatagaaactattttaggaagata 144684
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>gb|AF548005.1| Azoarcus evansii aerobic benzoate degradation gene cluster, complete
             sequence
          Length = 19112

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 48    ctgatgcaccattgttcaactcaaccga 75
             ||||||||| ||||||||||||||||||
Sbjct: 10519 ctgatgcactattgttcaactcaaccga 10546
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>emb|AL442126.6| Human DNA sequence from clone RP11-409J23 on chromosome 13, complete
            sequence
          Length = 133789

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 505  agaaactattttaggaagata 525
            |||||||||||||||||||||
Sbjct: 1944 agaaactattttaggaagata 1964
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>emb|AL359842.14| Human DNA sequence from clone RP11-388D4 on chromosome 13 Contains a
              peroxisomal biogenesis factor 12 (PEX12) pseudogene,
              complete sequence
          Length = 136943

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 505    agaaactattttaggaagata 525
              |||||||||||||||||||||
Sbjct: 136887 agaaactattttaggaagata 136907
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>gb|AC160555.4| Mus musculus chromosome 5, clone RP23-387L12, complete sequence
          Length = 196977

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 123   aaatcatatttgaatacaaga 143
             |||||||||||||||||||||
Sbjct: 60714 aaatcatatttgaatacaaga 60694
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 352     catgagctgctgctgtggttg 372
               |||||||||||||||||||||
Sbjct: 3292178 catgagctgctgctgtggttg 3292158
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>dbj|AP002536.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0015I14
          Length = 150650

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 352   catgagctgctgctgtggttg 372
             |||||||||||||||||||||
Sbjct: 79541 catgagctgctgctgtggttg 79521
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>dbj|AK109271.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-188-A07, full
           insert sequence
          Length = 588

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 352 catgagctgctgctgtggttg 372
           |||||||||||||||||||||
Sbjct: 46  catgagctgctgctgtggttg 26
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>emb|CR792454.8| Zebrafish DNA sequence from clone CH211-9F20 in linkage group 4,
             complete sequence
          Length = 195790

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 346   ctgtagcatgagctgctgctg 366
             |||||||||||||||||||||
Sbjct: 90844 ctgtagcatgagctgctgctg 90864
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>gb|AC025501.19| Mus musculus chromosome 10, clone RP23-129O23, complete sequence
          Length = 218156

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 125   atcatatttgaatacaagataata 148
             ||||||| ||||||||||||||||
Sbjct: 30180 atcatatctgaatacaagataata 30203
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>ref|NM_121987.2| Arabidopsis thaliana EMB2734; lyase AT5G19820 (EMB2734) mRNA,
            complete cds
          Length = 3922

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 566  accattgaacaaagctgatcatgcacgacttttgcttcaa 605
            |||||||| || ||||||||||| || ||||| |||||||
Sbjct: 3180 accattgagcagagctgatcatgaaccactttggcttcaa 3141
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>gb|AY790940.1| Homo sapiens insulin-like growth factor 1 (somatomedin C) (IGF1) gene,
             complete cds
          Length = 88577

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 358   ctgctgctgtggttgcaaggtgga 381
             |||||||||||||||||| |||||
Sbjct: 66553 ctgctgctgtggttgcaaagtgga 66576
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>gb|AC159127.8| Mus musculus chromosome 3, clone RP24-214E8, complete sequence
          Length = 195609

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   ttgaatacaagataatatac 151
             ||||||||||||||||||||
Sbjct: 66803 ttgaatacaagataatatac 66822
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>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence
          Length = 1618915

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 274     gaattatggaaagaaaagca 293
               ||||||||||||||||||||
Sbjct: 1313548 gaattatggaaagaaaagca 1313529
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>gb|AC007863.15| Trypanosoma brucei chromosome 6 clone RPCI93-26G9, complete sequence
          Length = 140056

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 274   gaattatggaaagaaaagca 293
             ||||||||||||||||||||
Sbjct: 27365 gaattatggaaagaaaagca 27384
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>gb|AC166486.5| Mus musculus chromosome 1, clone RP23-187M9, complete sequence
          Length = 187098

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 612    catcttttataggcaagcag 631
              ||||||||||||||||||||
Sbjct: 109130 catcttttataggcaagcag 109149
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>gb|AC150993.4| Bos taurus  BAC CH240-186K21 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 182043

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 600    cttcaatcttgtcatcttttatag 623
              |||||||||| |||||||||||||
Sbjct: 164439 cttcaatcttctcatcttttatag 164462
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>gb|AC120403.8| Mus musculus chromosome 17, clone RP24-405C18, complete sequence
          Length = 178435

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 612    catcttttataggcaagcag 631
              ||||||||||||||||||||
Sbjct: 157952 catcttttataggcaagcag 157933
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>emb|AJ853849.1| Sus scrofa PRSS11 gene (partial), DMBT1 gene, AWN gene, AQN-1 gene,
              PSP-II gene, PSP-I gene, AQN-3 gene and C10ORF120 gene
          Length = 270148

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 304    ttgcagccacaaaacagaagagaa 327
              |||||||||||||| |||||||||
Sbjct: 248674 ttgcagccacaaaaaagaagagaa 248697
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>emb|CR940306.3| M.truncatula DNA sequence from clone MTH2-10B11 on chromosome 3,
             complete sequence
          Length = 90977

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 566   accattgaacaaagctgatcatgcacgacttttgcttcaa 605
             ||||||||||| ||||| |||||||  | |||||||||||
Sbjct: 30566 accattgaacagagctgttcatgcataatttttgcttcaa 30605
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>ref|XM_803717.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053507925.20) partial mRNA
          Length = 4338

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 550  tgcatccgatctctccaccattga 573
            |||||| |||||||||||||||||
Sbjct: 1263 tgcatcggatctctccaccattga 1286
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>ref|XM_805808.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053509059.70) partial mRNA
          Length = 4338

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 550  tgcatccgatctctccaccattga 573
            |||||| |||||||||||||||||
Sbjct: 1263 tgcatcggatctctccaccattga 1286
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>gb|AC107368.11| Mus musculus chromosome 3, clone RP23-243N8, complete sequence
          Length = 253744

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 132    ttgaatacaagataatatac 151
              ||||||||||||||||||||
Sbjct: 246296 ttgaatacaagataatatac 246315
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>gb|AC123074.2| Mus musculus BAC clone RP23-168H19 from 10, complete sequence
          Length = 210189

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 125 atcatatttgaatacaagataata 148
           ||||||| ||||||||||||||||
Sbjct: 755 atcatatctgaatacaagataata 732
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>gb|AC124766.3| Mus musculus BAC clone RP23-204I12 from 1, complete sequence
          Length = 196490

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 612   catcttttataggcaagcag 631
             ||||||||||||||||||||
Sbjct: 24088 catcttttataggcaagcag 24107
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>gb|AC147472.17| Medicago truncatula clone mth2-24n18, complete sequence
          Length = 133272

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 566  accattgaacaaagctgatcatgcacgacttttgcttcaa 605
            ||||||||||| ||||| |||||||  | |||||||||||
Sbjct: 4055 accattgaacagagctgttcatgcataatttttgcttcaa 4016
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>emb|AL079342.17|HSDJ72A23 Human DNA sequence from clone RP1-72A23 on chromosome 6 Contains an
             adaptor-related (clathrin-associated) protein complex 4,
             sigma 1 subunit (AP4A1) pseudogene, a novel pseudogene,
             the 5' end of the RNGTT gene for RNA guanylyltransferase
             and 5'-phosphatase (mRNA capping enzyme, CAP1A) and two
             CpG islands, complete sequence
          Length = 150541

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 134   gaatacaagataatatacac 153
             ||||||||||||||||||||
Sbjct: 51067 gaatacaagataatatacac 51048
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>emb|AL035401.23|HS209A6 Human DNA sequence from clone RP1-209A6 on chromosome 6p22.1-24.3
             Contains part of a novel gene, complete sequence
          Length = 105960

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 486   acagaacctcagcaaaaatagaaa 509
             |||||||||||| |||||||||||
Sbjct: 27752 acagaacctcagtaaaaatagaaa 27729
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>gb|AY051083.1| Arabidopsis thaliana unknown protein (At5g19820) mRNA, complete cds
          Length = 3382

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 566  accattgaacaaagctgatcatgcacgacttttgcttcaa 605
            |||||||| || ||||||||||| || ||||| |||||||
Sbjct: 3116 accattgagcagagctgatcatgaaccactttggcttcaa 3077
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>gb|AY035044.1| Arabidopsis thaliana unknown protein (At5g19820) mRNA, complete cds
          Length = 3919

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                    
Query: 566  accattgaacaaagctgatcatgcacgacttttgcttcaa 605
            |||||||| || ||||||||||| || ||||| |||||||
Sbjct: 3165 accattgagcagagctgatcatgaaccactttggcttcaa 3126
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>emb|AL035477.6|PFMAL4P4 Plasmodium falciparum MAL4P4
          Length = 272698

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 122    aaaatcatatttgaatacaa 141
              ||||||||||||||||||||
Sbjct: 156720 aaaatcatatttgaatacaa 156701
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>gb|AY649844.2| Schistosoma mansoni insulin receptor tyrosine kinase 3 (RTK-3) mRNA,
            complete cds
          Length = 5521

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 187  caatcccttgaagcgaccaa 206
            ||||||||||||||||||||
Sbjct: 4758 caatcccttgaagcgaccaa 4777
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>gb|AC108050.5| Homo sapiens BAC clone RP11-331M18 from 4, complete sequence
          Length = 214250

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 531    tgtgaggtccaagaaccagtgcat 554
              |||||||||||||||| |||||||
Sbjct: 152954 tgtgaggtccaagaactagtgcat 152977
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>gb|AC113370.2| Homo sapiens chromosome 5 clone RP11-124O5, complete sequence
          Length = 189590

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 366    gtggttgcaaggtggaaaat 385
              ||||||||||||||||||||
Sbjct: 160535 gtggttgcaaggtggaaaat 160516
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>gb|AC109469.2| Homo sapiens chromosome 5 clone RP11-349F8, complete sequence
          Length = 184776

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 366   gtggttgcaaggtggaaaat 385
             ||||||||||||||||||||
Sbjct: 69703 gtggttgcaaggtggaaaat 69684
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>gb|AC109480.3| Homo sapiens chromosome 5 clone RP11-455B3, complete sequence
          Length = 191923

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 130    atttgaatacaagataatatacac 153
              |||||||||||| |||||||||||
Sbjct: 125542 atttgaatacaaaataatatacac 125519
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>gb|AC010202.6| Homo sapiens 12q BAC RP11-210L7 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 170004

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 358    ctgctgctgtggttgcaaggtgga 381
              |||||||||||||||||| |||||
Sbjct: 148620 ctgctgctgtggttgcaaagtgga 148643
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>gb|AC027104.6| Homo sapiens chromosome 15, clone RP11-326L17, complete sequence
          Length = 180202

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 298   tcaaccttgcagccacaaaa 317
             ||||||||||||||||||||
Sbjct: 84712 tcaaccttgcagccacaaaa 84731
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>dbj|AK034789.1| Mus musculus 12 days embryo embryonic body between diaphragm region
            and neck cDNA, RIKEN full-length enriched library,
            clone:9430039D06 product:unclassifiable, full insert
            sequence
          Length = 3825

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 612  catcttttataggcaagcag 631
            ||||||||||||||||||||
Sbjct: 2744 catcttttataggcaagcag 2763
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>gb|AF532111.1| Mus musculus strain 129/SvJ BAC clone citb10i1 from the MHC region,
              complete sequence
          Length = 178254

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 612    catcttttataggcaagcag 631
              ||||||||||||||||||||
Sbjct: 138031 catcttttataggcaagcag 138012
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>gb|AY260957.1| Homo sapiens insulin-like growth factor 1 (somatomedin C) (IGF1) gene,
             complete cds
          Length = 88066

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 358   ctgctgctgtggttgcaaggtgga 381
             |||||||||||||||||| |||||
Sbjct: 66517 ctgctgctgtggttgcaaagtgga 66540
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>gb|AC011737.10| Homo sapiens BAC clone RP11-33N4 from 2, complete sequence
          Length = 176709

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    taatatacactctacatcaa 163
              ||||||||||||||||||||
Sbjct: 126762 taatatacactctacatcaa 126743
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>gb|AF296838.1|T29J13 Arabidopsis thaliana BAC T29J13
          Length = 100592

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 566   accattgaacaaagctgatcatgcacgacttttgcttcaa 605
             |||||||| || ||||||||||| || ||||| |||||||
Sbjct: 85276 accattgagcagagctgatcatgaaccactttggcttcaa 85315
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>emb|CR974472.7| Mouse DNA sequence from clone RP24-120D11 on chromosome 17, complete
             sequence
          Length = 192085

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 612   catcttttataggcaagcag 631
             ||||||||||||||||||||
Sbjct: 37877 catcttttataggcaagcag 37858
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>gb|AC142415.4| Mus musculus BAC clone RP23-155F24 from 10, complete sequence
          Length = 209693

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 125    atcatatttgaatacaagataata 148
              ||||||| ||||||||||||||||
Sbjct: 153532 atcatatctgaatacaagataata 153509
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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 267     caatgacgaattatggaaagaaaa 290
               |||||| |||||||||||||||||
Sbjct: 1817212 caatgatgaattatggaaagaaaa 1817189
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>gb|AC156016.2| Mus musculus BAC clone RP24-320A12 from chromosome 14, complete
             sequence
          Length = 154465

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 612   catcttttataggcaagcag 631
             ||||||||||||||||||||
Sbjct: 48753 catcttttataggcaagcag 48734
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>gb|AC155343.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1
             clone KBrH077A05, complete sequence
          Length = 113253

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 114   caagccccaaaatcatattt 133
             ||||||||||||||||||||
Sbjct: 33183 caagccccaaaatcatattt 33202
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>emb|AL603792.12| Mouse DNA sequence from clone RP23-328B4 on chromosome 11, complete
              sequence
          Length = 203030

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 477    ttccattgcacagaacctcagcaa 500
              |||| |||||||||||||||||||
Sbjct: 178659 ttcccttgcacagaacctcagcaa 178636


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,092,677
Number of Sequences: 3902068
Number of extensions: 7092677
Number of successful extensions: 142964
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 142706
Number of HSP's gapped (non-prelim): 241
length of query: 646
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 623
effective length of database: 17,143,297,704
effective search space: 10680274469592
effective search space used: 10680274469592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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