ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags15m06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476017.1| Oryza sativa (japonica cultivar-group), predic... 80 1e-11
2gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome... 80 1e-11
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 80 1e-11
4gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chr... 44 0.59
5gb|AC095247.5| Rattus norvegicus 4 BAC CH230-10C6 (Children's Ho... 44 0.59
6gb|AC087066.3| Rattus norvegicus strain Brown Norway clone RP31-... 44 0.59
7gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold 44 0.59
8ref|XM_420183.1| PREDICTED: Gallus gallus similar to Alpha-galac... 42 2.3
9gb|AC165293.2| Mus musculus BAC clone RP23-268A5 from chromosome... 42 2.3
10emb|CR759874.20| Zebrafish DNA sequence from clone CH211-214H24 ... 42 2.3
11emb|BX927121.9| Zebrafish DNA sequence from clone CH211-132A5 in... 42 2.3
12dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 42 2.3
13emb|CR387274.1| Gallus gallus finished cDNA, clone ChEST46g11 42 2.3
14emb|BX929485.2| Gallus gallus finished cDNA, clone ChEST184p22 42 2.3
15gb|AC091755.3| Sus scrofa clone RP44-123F10, complete sequence 42 2.3
16gb|AC091756.3| Sus scrofa clone RP44-13J14, complete sequence 42 2.3
17ref|XM_315956.2| Anopheles gambiae str. PEST ENSANGP00000013515 ... 42 2.3
18emb|BX294662.13| Zebrafish DNA sequence from clone DKEYP-117E6 i... 42 2.3
19emb|BX649405.13| Zebrafish DNA sequence from clone DKEY-190M16 i... 42 2.3
20emb|BX005261.8| Zebrafish DNA sequence from clone DKEY-20I6 in l... 42 2.3
21gb|AC140308.2| Mus musculus BAC clone RP23-424G15 from 1, comple... 42 2.3
22ref|NM_179779.1| Arabidopsis thaliana unknown protein AT2G27880 ... 40 9.2
23ref|NM_111043.2| Arabidopsis thaliana DNA binding AT3G01770 mRNA... 40 9.2
24gb|AC159419.1| Trypanosoma brucei chromosome 5 clone RPCI93-25P1... 40 9.2
25ref|XM_469381.1| Oryza sativa (japonica cultivar-group), mRNA 40 9.2
26gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence 40 9.2
27gb|AC159453.1| Trypanosoma brucei chromosome 5 clone RPCI93-5M21... 40 9.2
28ref|XM_960548.1| Neurospora crassa OR74A hypothetical protein (N... 40 9.2
29ref|XM_331708.1| Neurospora crassa OR74A hypothetical protein (N... 40 9.2
30gb|CP000234.1| Lactobacillus salivarius subsp. salivarius UCC118... 40 9.2
31gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 9.2
32emb|CR388412.9| Zebrafish DNA sequence from clone CH211-69G13 in... 40 9.2
33gb|AC124581.4| Mus musculus BAC clone RP23-116E3 from chromosome... 40 9.2
34gb|AC009325.8|ATAC009325 Arabidopsis thaliana chromosome III BAC... 40 9.2
35gb|AC010797.4|ATAC010797 Arabidopsis thaliana chromosome III BAC... 40 9.2
36gb|AC136729.7| Mus musculus chromosome 3, clone RP23-175I24, com... 40 9.2
37emb|AL162580.20| Human DNA sequence from clone RP11-524A17 on ch... 40 9.2
38emb|AL354829.8| Human DNA sequence from clone RP11-218B22 on chr... 40 9.2
39emb|AL161420.10| Human DNA sequence from clone RP11-155N3 on chr... 40 9.2
40gb|AY039654.1| Danio rerio M5 muscarinic receptor gene, complete... 40 9.2
41emb|BX321904.19| Zebrafish DNA sequence from clone DKEY-279K15 i... 40 9.2
42gb|AY045863.2| Arabidopsis thaliana At3g01770 mRNA sequence 40 9.2
43gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 9.2
44gb|AY099729.1| Arabidopsis thaliana unknown protein (At3g01770) ... 40 9.2
45gb|AC025178.8| Homo sapiens chromosome 5 clone CTD-2152M20, comp... 40 9.2
46dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 9.2
47gb|AC006929.4| Arabidopsis thaliana chromosome 2 clone T1E2 map ... 40 9.2
48gb|AC005824.3| Arabidopsis thaliana chromosome 2 clone F15K20 ma... 40 9.2
49gb|AC090403.8| Homo sapiens chromosome 18, clone RP11-739N10, co... 40 9.2
50gb|AY057662.1| Arabidopsis thaliana AT3g01770/F28J7_10 mRNA, com... 40 9.2
51ref|NM_001020803.1| Danio rerio cholinergic receptor, muscarinic... 40 9.2
52gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 9.2
53gb|AC021842.7|AC021842 Homo sapiens chromosome 8, clone RP11-472... 40 9.2
54gb|AC020559.4|AC020559 Homo sapiens BAC clone RP11-527F13 from 6... 40 9.2
55dbj|AK040843.1| Mus musculus adult male aorta and vein cDNA, RIK... 40 9.2
56dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
57dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
58emb|BX823853.1|CNS0A4V5 Arabidopsis thaliana Full-length cDNA Co... 40 9.2
59gb|AC123974.6| Oryza sativa chromosome 3 BAC OSJNBb0021P10 genom... 40 9.2
60dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 9.2
61dbj|BS000060.1| Pan troglodytes chromosome 22 clone:RP43-086L15,... 40 9.2
62gb|AC133952.4| Mus musculus BAC clone RP23-114H2 from 1, complet... 40 9.2
63emb|BX248324.9| Zebrafish DNA sequence from clone DKEY-227H16 in... 40 9.2
64emb|CR678065.5| Zebrafish DNA sequence from clone DKEY-238D19 in... 40 9.2
65gb|AF090120.1|AF090120 Fugu rubripes beta-amyloid precursor prot... 40 9.2
66dbj|AP001678.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 9.2
67emb|AL160282.18| Human DNA sequence from clone RP11-315I20 on ch... 40 9.2
68emb|CR854851.12| Zebrafish DNA sequence from clone DKEY-98D7 in ... 40 9.2
69dbj|AB233469.1| Petromyzon marinus PQRFa mRNA for PQRFamide pept... 40 9.2
70emb|X56790.1|MMCYR61G Mouse growth factor inducible immediate ea... 40 9.2
71dbj|AP001254.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 9.2 
>ref|XM_476017.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 945

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 115/140 (82%)
 Strand = Plus / Minus

                                                                       
Query: 128 tgggagacgaagaagccgaccgagaaagcagcgatggcgatggcgatcacctccttgttg 187
           |||||||||||||||||||  ||||| || |||| |||| ||||||| || |||||||| 
Sbjct: 923 tgggagacgaagaagccgagggagaaggcggcgacggcggtggcgatgacatccttgttc 864

                                                                       
Query: 188 ttccttgccttctccaccacattgtccgcccatttcatgtccgtcagctgctccagcccc 247
            |||| ||| ||||||||||    ||||||||  |||||||   ||| ||||||||| ||
Sbjct: 863 ctcctcgccgtctccaccacgccctccgcccacctcatgtctcccagatgctccagctcc 804

                               
Query: 248 cctgccacgcgctctttcca 267
           || |||||||||||| ||||
Sbjct: 803 cccgccacgcgctctctcca 784
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>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08,
             complete sequence
          Length = 142196

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 115/140 (82%)
 Strand = Plus / Minus

                                                                         
Query: 128   tgggagacgaagaagccgaccgagaaagcagcgatggcgatggcgatcacctccttgttg 187
             |||||||||||||||||||  ||||| || |||| |||| ||||||| || |||||||| 
Sbjct: 54014 tgggagacgaagaagccgagggagaaggcggcgacggcggtggcgatgacatccttgttc 53955

                                                                         
Query: 188   ttccttgccttctccaccacattgtccgcccatttcatgtccgtcagctgctccagcccc 247
              |||| ||| ||||||||||    ||||||||  |||||||   ||| ||||||||| ||
Sbjct: 53954 ctcctcgccgtctccaccacgccctccgcccacctcatgtctcccagatgctccagctcc 53895

                                 
Query: 248   cctgccacgcgctctttcca 267
             || |||||||||||| ||||
Sbjct: 53894 cccgccacgcgctctctcca 53875
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 115/140 (82%)
 Strand = Plus / Minus

                                                                            
Query: 128      tgggagacgaagaagccgaccgagaaagcagcgatggcgatggcgatcacctccttgttg 187
                |||||||||||||||||||  ||||| || |||| |||| ||||||| || |||||||| 
Sbjct: 29275357 tgggagacgaagaagccgagggagaaggcggcgacggcggtggcgatgacatccttgttc 29275298

                                                                            
Query: 188      ttccttgccttctccaccacattgtccgcccatttcatgtccgtcagctgctccagcccc 247
                 |||| ||| ||||||||||    ||||||||  |||||||   ||| ||||||||| ||
Sbjct: 29275297 ctcctcgccgtctccaccacgccctccgcccacctcatgtctcccagatgctccagctcc 29275238

                                    
Query: 248      cctgccacgcgctctttcca 267
                || |||||||||||| ||||
Sbjct: 29275237 cccgccacgcgctctctcca 29275218
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>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete
               sequence
          Length = 2105742

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 183     tgttgttccttgccttctccac 204
               ||||||||||||||||||||||
Sbjct: 2076824 tgttgttccttgccttctccac 2076845
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>gb|AC095247.5| Rattus norvegicus 4 BAC CH230-10C6 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 238466

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 36    aaataactttacttcagtacat 57
             ||||||||||||||||||||||
Sbjct: 81261 aaataactttacttcagtacat 81282
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>gb|AC087066.3| Rattus norvegicus strain Brown Norway clone RP31-194D8, complete
             sequence
          Length = 166751

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 36    aaataactttacttcagtacat 57
             ||||||||||||||||||||||
Sbjct: 76827 aaataactttacttcagtacat 76848
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>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold
          Length = 1888123

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 36     aaataactttacttcagtacat 57
              ||||||||||||||||||||||
Sbjct: 905165 aaataactttacttcagtacat 905186
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>ref|XM_420183.1| PREDICTED: Gallus gallus similar to Alpha-galactosidase A precursor
            (Melibiase) (Alpha-D-galactoside galactohydrolase)
            (Alpha-D-galactosidase A) (Agalsidase alfa) (LOC422188),
            mRNA
          Length = 3972

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 166  gatggcgatcacctccttgtt 186
            |||||||||||||||||||||
Sbjct: 3600 gatggcgatcacctccttgtt 3580
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>gb|AC165293.2| Mus musculus BAC clone RP23-268A5 from chromosome 12, complete sequence
          Length = 179330

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 79    cgtgacatgtttgttcatatg 99
             |||||||||||||||||||||
Sbjct: 72399 cgtgacatgtttgttcatatg 72379
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>emb|CR759874.20| Zebrafish DNA sequence from clone CH211-214H24 in linkage group 20,
             complete sequence
          Length = 223471

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 43    tttacttcagtacatatttac 63
             |||||||||||||||||||||
Sbjct: 39208 tttacttcagtacatatttac 39188
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>emb|BX927121.9| Zebrafish DNA sequence from clone CH211-132A5 in linkage group 2,
             complete sequence
          Length = 177223

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 29    aatacacaaataactttactt 49
             |||||||||||||||||||||
Sbjct: 13638 aatacacaaataactttactt 13658
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>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009
          Length = 1913118

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 423     ccggcttctgcgccggcttct 443
               |||||||||||||||||||||
Sbjct: 1271304 ccggcttctgcgccggcttct 1271284
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>emb|CR387274.1| Gallus gallus finished cDNA, clone ChEST46g11
          Length = 1345

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 166 gatggcgatcacctccttgtt 186
           |||||||||||||||||||||
Sbjct: 951 gatggcgatcacctccttgtt 931
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>emb|BX929485.2| Gallus gallus finished cDNA, clone ChEST184p22
          Length = 1324

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 166 gatggcgatcacctccttgtt 186
           |||||||||||||||||||||
Sbjct: 952 gatggcgatcacctccttgtt 932
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>gb|AC091755.3| Sus scrofa clone RP44-123F10, complete sequence
          Length = 207865

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 529   ctgctcttccttctgtttgct 549
             |||||||||||||||||||||
Sbjct: 22015 ctgctcttccttctgtttgct 22035
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>gb|AC091756.3| Sus scrofa clone RP44-13J14, complete sequence
          Length = 152058

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 529   ctgctcttccttctgtttgct 549
             |||||||||||||||||||||
Sbjct: 84648 ctgctcttccttctgtttgct 84668
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>ref|XM_315956.2| Anopheles gambiae str. PEST ENSANGP00000013515 (ENSANGG00000011026),
            partial mRNA
          Length = 5127

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 554  tcttccggttgcttctgctgt 574
            |||||||||||||||||||||
Sbjct: 1688 tcttccggttgcttctgctgt 1668
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>emb|BX294662.13| Zebrafish DNA sequence from clone DKEYP-117E6 in linkage group 20,
             complete sequence
          Length = 154558

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 43    tttacttcagtacatatttac 63
             |||||||||||||||||||||
Sbjct: 53410 tttacttcagtacatatttac 53390
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>emb|BX649405.13| Zebrafish DNA sequence from clone DKEY-190M16 in linkage group 1,
              complete sequence
          Length = 231915

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 521    agcttttgctgctcttccttc 541
              |||||||||||||||||||||
Sbjct: 162223 agcttttgctgctcttccttc 162243
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>emb|BX005261.8| Zebrafish DNA sequence from clone DKEY-20I6 in linkage group 1, complete
              sequence
          Length = 228767

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 521    agcttttgctgctcttccttc 541
              |||||||||||||||||||||
Sbjct: 102605 agcttttgctgctcttccttc 102625
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>gb|AC140308.2| Mus musculus BAC clone RP23-424G15 from 1, complete sequence
          Length = 207633

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 77    tacgtgacatgtttgttcata 97
             |||||||||||||||||||||
Sbjct: 45786 tacgtgacatgtttgttcata 45766
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>ref|NM_179779.1| Arabidopsis thaliana unknown protein AT2G27880 mRNA, complete cds
          Length = 2994

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 556 ttccggttgcttctgctgtt 575
           ||||||||||||||||||||
Sbjct: 215 ttccggttgcttctgctgtt 234
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>ref|NM_111043.2| Arabidopsis thaliana DNA binding AT3G01770 mRNA, complete cds
          Length = 2288

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 130 ggagacgaagaagccgaccgagaa 153
           ||||||||||||| ||||||||||
Sbjct: 80  ggagacgaagaagacgaccgagaa 57
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>gb|AC159419.1| Trypanosoma brucei chromosome 5 clone RPCI93-25P15, complete sequence
          Length = 130539

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 557   tccggttgcttctgctgttg 576
             ||||||||||||||||||||
Sbjct: 99044 tccggttgcttctgctgttg 99063
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>ref|XM_469381.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2016

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 423 ccggcttctgcgccggcttctcgg 446
           ||||| ||||||||||||||||||
Sbjct: 194 ccggcctctgcgccggcttctcgg 217
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>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence
          Length = 1608198

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 557     tccggttgcttctgctgttg 576
               ||||||||||||||||||||
Sbjct: 1510766 tccggttgcttctgctgttg 1510785
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>gb|AC159453.1| Trypanosoma brucei chromosome 5 clone RPCI93-5M21, complete sequence
          Length = 106046

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 557  tccggttgcttctgctgttg 576
            ||||||||||||||||||||
Sbjct: 8614 tccggttgcttctgctgttg 8633
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>ref|XM_960548.1| Neurospora crassa OR74A hypothetical protein (NCU02510.1) partial
            mRNA
          Length = 5037

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 196  cttctccaccacattgtccg 215
            ||||||||||||||||||||
Sbjct: 1558 cttctccaccacattgtccg 1577
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>ref|XM_331708.1| Neurospora crassa OR74A hypothetical protein (NCU02510.1) partial
            mRNA
          Length = 5037

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 196  cttctccaccacattgtccg 215
            ||||||||||||||||||||
Sbjct: 1558 cttctccaccacattgtccg 1577
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>gb|CP000234.1| Lactobacillus salivarius subsp. salivarius UCC118 plasmid pMP118,
              complete genome
          Length = 242436

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 151    gaaagcagcgatggcgatgg 170
              ||||||||||||||||||||
Sbjct: 190840 gaaagcagcgatggcgatgg 190821
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 423      ccggcttctgcgccggcttctcgg 446
                ||||| ||||||||||||||||||
Sbjct: 27664574 ccggcctctgcgccggcttctcgg 27664597
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>emb|CR388412.9| Zebrafish DNA sequence from clone CH211-69G13 in linkage group 5,
              complete sequence
          Length = 158289

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     ctttacttcagtacatattt 61
              ||||||||||||||||||||
Sbjct: 150260 ctttacttcagtacatattt 150279
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>gb|AC124581.4| Mus musculus BAC clone RP23-116E3 from chromosome 13, complete sequence
          Length = 205173

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 532   ctcttccttctgtttgctgg 551
             ||||||||||||||||||||
Sbjct: 37449 ctcttccttctgtttgctgg 37430
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>gb|AC009325.8|ATAC009325 Arabidopsis thaliana chromosome III BAC F4P13 genomic sequence, complete
              sequence
          Length = 105543

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 130    ggagacgaagaagccgaccgagaa 153
              ||||||||||||| ||||||||||
Sbjct: 100697 ggagacgaagaagacgaccgagaa 100720
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>gb|AC010797.4|ATAC010797 Arabidopsis thaliana chromosome III BAC F28J7 genomic sequence,
             complete sequence
          Length = 89154

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 130   ggagacgaagaagccgaccgagaa 153
             ||||||||||||| ||||||||||
Sbjct: 23403 ggagacgaagaagacgaccgagaa 23426
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>gb|AC136729.7| Mus musculus chromosome 3, clone RP23-175I24, complete sequence
          Length = 216602

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   tgttccttgccttctccacc 205
             ||||||||||||||||||||
Sbjct: 74241 tgttccttgccttctccacc 74260
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>emb|AL162580.20| Human DNA sequence from clone RP11-524A17 on chromosome 6 Contains a
              novel gene and a protein phosphatase 1 regulatory
              (inhibitor) subunit 14A (PPP1R14A) pseudogene, complete
              sequence
          Length = 171483

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 177    cctccttgttgttccttgccttct 200
              |||||||||| |||||||||||||
Sbjct: 130870 cctccttgttcttccttgccttct 130893
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>emb|AL354829.8| Human DNA sequence from clone RP11-218B22 on chromosome 13 Contains the
             3' end of the DIAPH3 gene for diaphanous homolog 3
             (Drosophila), complete sequence
          Length = 154212

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 633   tctcttccttgggcttcatg 652
             ||||||||||||||||||||
Sbjct: 24553 tctcttccttgggcttcatg 24572
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>emb|AL161420.10| Human DNA sequence from clone RP11-155N3 on chromosome 13 Contains the
             3' end of the gene for zizimin1 (KIAA1058) and a novel
             gene, complete sequence
          Length = 163316

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    acatgtttgttcatatgtat 102
             ||||||||||||||||||||
Sbjct: 22372 acatgtttgttcatatgtat 22353
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>gb|AY039654.1| Danio rerio M5 muscarinic receptor gene, complete cds
          Length = 1473

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 162 tggcgatggcgatcacctcc 181
           ||||||||||||||||||||
Sbjct: 88  tggcgatggcgatcacctcc 69
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>emb|BX321904.19| Zebrafish DNA sequence from clone DKEY-279K15 in linkage group 1,
             complete sequence
          Length = 153891

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    tacactttaatacacaaata 40
             ||||||||||||||||||||
Sbjct: 18793 tacactttaatacacaaata 18774
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>gb|AY045863.2| Arabidopsis thaliana At3g01770 mRNA sequence
          Length = 1743

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 130 ggagacgaagaagccgaccgagaa 153
           ||||||||||||| ||||||||||
Sbjct: 80  ggagacgaagaagacgaccgagaa 57
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 225     tgtccgtcagctgctccagc 244
               ||||||||||||||||||||
Sbjct: 3298297 tgtccgtcagctgctccagc 3298278
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>gb|AY099729.1| Arabidopsis thaliana unknown protein (At3g01770) mRNA, complete cds
          Length = 2219

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 130 ggagacgaagaagccgaccgagaa 153
           ||||||||||||| ||||||||||
Sbjct: 81  ggagacgaagaagacgaccgagaa 58
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>gb|AC025178.8| Homo sapiens chromosome 5 clone CTD-2152M20, complete sequence
          Length = 134995

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    ttaatacacaaataacttta 46
             ||||||||||||||||||||
Sbjct: 44272 ttaatacacaaataacttta 44253
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 278     gccgtgaccttcttctccagcaccgcct 305
               |||||| |||||||||||| ||||||||
Sbjct: 4207614 gccgtgcccttcttctccaccaccgcct 4207587
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>gb|AC006929.4| Arabidopsis thaliana chromosome 2 clone T1E2 map mi54, complete
             sequence
          Length = 94884

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 556   ttccggttgcttctgctgtt 575
             ||||||||||||||||||||
Sbjct: 89318 ttccggttgcttctgctgtt 89299
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>gb|AC005824.3| Arabidopsis thaliana chromosome 2 clone F15K20 map B68, complete
            sequence
          Length = 118196

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 556  ttccggttgcttctgctgtt 575
            ||||||||||||||||||||
Sbjct: 7975 ttccggttgcttctgctgtt 7956
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>gb|AC090403.8| Homo sapiens chromosome 18, clone RP11-739N10, complete sequence
          Length = 181250

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    cttgttgttccttgccttct 200
              ||||||||||||||||||||
Sbjct: 119826 cttgttgttccttgccttct 119845
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>gb|AY057662.1| Arabidopsis thaliana AT3g01770/F28J7_10 mRNA, complete cds
          Length = 2282

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 130 ggagacgaagaagccgaccgagaa 153
           ||||||||||||| ||||||||||
Sbjct: 74  ggagacgaagaagacgaccgagaa 51
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>ref|NM_001020803.1| Danio rerio cholinergic receptor, muscarinic 5 (chrm5), mRNA
          Length = 1473

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 162 tggcgatggcgatcacctcc 181
           ||||||||||||||||||||
Sbjct: 88  tggcgatggcgatcacctcc 69
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 420     cctccggcttctgcgccggc 439
               ||||||||||||||||||||
Sbjct: 1299634 cctccggcttctgcgccggc 1299653
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>gb|AC021842.7|AC021842 Homo sapiens chromosome 8, clone RP11-472N16, complete sequence
          Length = 190044

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     tacttcagtacatatttacc 64
              ||||||||||||||||||||
Sbjct: 144487 tacttcagtacatatttacc 144468
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>gb|AC020559.4|AC020559 Homo sapiens BAC clone RP11-527F13 from 6, complete sequence
          Length = 194079

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 177   cctccttgttgttccttgccttct 200
             |||||||||| |||||||||||||
Sbjct: 53236 cctccttgttcttccttgccttct 53259
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>dbj|AK040843.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length
           enriched library, clone:A530029P05
           product:unclassifiable, full insert sequence
          Length = 1321

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 186 tgttccttgccttctccacc 205
           ||||||||||||||||||||
Sbjct: 988 tgttccttgccttctccacc 969
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 90      tgttcatatgtattgctgct 109
               ||||||||||||||||||||
Sbjct: 3262199 tgttcatatgtattgctgct 3262180
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 423      ccggcttctgcgccggcttctcgg 446
                ||||| ||||||||||||||||||
Sbjct: 27755897 ccggcctctgcgccggcttctcgg 27755920
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>emb|BX823853.1|CNS0A4V5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS83ZG05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 2175

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 130 ggagacgaagaagccgaccgagaa 153
           ||||||||||||| ||||||||||
Sbjct: 65  ggagacgaagaagacgaccgagaa 42
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>gb|AC123974.6| Oryza sativa chromosome 3 BAC OSJNBb0021P10 genomic sequence, complete
              sequence
          Length = 136982

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 423    ccggcttctgcgccggcttctcgg 446
              ||||| ||||||||||||||||||
Sbjct: 106271 ccggcctctgcgccggcttctcgg 106294
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 155     gcagcgatggcgatggcgat 174
               ||||||||||||||||||||
Sbjct: 5039508 gcagcgatggcgatggcgat 5039527
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>dbj|BS000060.1| Pan troglodytes chromosome 22 clone:RP43-086L15, map 22, complete
             sequences
          Length = 159919

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 29    aatacacaaataactttacttcag 52
             ||||||||||||| ||||||||||
Sbjct: 80103 aatacacaaataagtttacttcag 80126
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>gb|AC133952.4| Mus musculus BAC clone RP23-114H2 from 1, complete sequence
          Length = 236382

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 527    tgctgctcttccttctgtttgctg 550
              |||||||||||||||| |||||||
Sbjct: 144513 tgctgctcttccttctttttgctg 144490
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>emb|BX248324.9| Zebrafish DNA sequence from clone DKEY-227H16 in linkage group 20,
              complete sequence
          Length = 209057

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 611    gacacaccctcctcctttcc 630
              ||||||||||||||||||||
Sbjct: 180661 gacacaccctcctcctttcc 180680
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>emb|CR678065.5| Zebrafish DNA sequence from clone DKEY-238D19 in linkage group 11,
             complete sequence
          Length = 19190

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    tttacttcagtacatattta 62
             ||||||||||||||||||||
Sbjct: 15360 tttacttcagtacatattta 15341
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>gb|AF090120.1|AF090120 Fugu rubripes beta-amyloid precursor protein, transcription factor
             E4TF1, splicing factor U2AF35, and cystathionine
             beta-synthetase genes, complete cds
          Length = 37208

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 452   gccggagctgccgcctgggg 471
             ||||||||||||||||||||
Sbjct: 33606 gccggagctgccgcctgggg 33587
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>dbj|AP001678.1| Homo sapiens genomic DNA, chromosome 21q, section 22/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 29     aatacacaaataactttacttcag 52
              ||||||||||||| ||||||||||
Sbjct: 200626 aatacacaaataagtttacttcag 200649
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>emb|AL160282.18| Human DNA sequence from clone RP11-315I20 on chromosome 1q12.1-21.3,
              complete sequence
          Length = 191594

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 282    tgaccttcttctccagcacc 301
              ||||||||||||||||||||
Sbjct: 128242 tgaccttcttctccagcacc 128223
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>emb|CR854851.12| Zebrafish DNA sequence from clone DKEY-98D7 in linkage group 16, complete
              sequence
          Length = 218036

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 235    ctgctccagcccccctgcca 254
              ||||||||||||||||||||
Sbjct: 135558 ctgctccagcccccctgcca 135577
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>dbj|AB233469.1| Petromyzon marinus PQRFa mRNA for PQRFamide peptide, complete cds
          Length = 770

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 298 caccgccttggcttccatcg 317
           ||||||||||||||||||||
Sbjct: 51  caccgccttggcttccatcg 32
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>emb|X56790.1|MMCYR61G Mouse growth factor inducible immediate early gene cyr61
          Length = 5196

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 186 tgttccttgccttctccacc 205
           ||||||||||||||||||||
Sbjct: 277 tgttccttgccttctccacc 296
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>dbj|AP001254.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B66B12,
             LL56-APP region, complete sequence
          Length = 173915

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 29    aatacacaaataactttacttcag 52
             ||||||||||||| ||||||||||
Sbjct: 23219 aatacacaaataagtttacttcag 23242


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,603,523
Number of Sequences: 3902068
Number of extensions: 6603523
Number of successful extensions: 151373
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 150553
Number of HSP's gapped (non-prelim): 817
length of query: 674
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 651
effective length of database: 17,143,297,704
effective search space: 11160286805304
effective search space used: 11160286805304
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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