>PSBW_ODOSI (P49508) Photosystem II reaction center W protein|
          Length = 115

 Score = 96.3 bits (238), Expect = 3e-20
 Identities = 40/68 (58%), Positives = 57/68 (83%)
 Frame = -3

Query: 434 SAELGDITGFYMVDEEGTLSSVDVSAKFVNGKPAAVEAKYVMRTPRDWDRFMRFMERYSQ 255
           +A+ G+ITG Y++D+EGTL + DV+A+F+NGKP A+E+ Y+M++P  WDRFMRFMERY +
Sbjct: 46  TAKEGEITGMYLIDQEGTLETRDVNAQFINGKPEAIESIYIMKSPEAWDRFMRFMERYGE 105

Query: 254 ANGLQFLK 231
           +NGL F K
Sbjct: 106 SNGLVFTK 113

>PSBW_GUITH (O78418) Photosystem II reaction center W protein|
          Length = 116

 Score = 94.7 bits (234), Expect = 8e-20
 Identities = 42/68 (61%), Positives = 54/68 (79%)
 Frame = -3

Query: 434 SAELGDITGFYMVDEEGTLSSVDVSAKFVNGKPAAVEAKYVMRTPRDWDRFMRFMERYSQ 255
           S+  G+ITG Y++DEEG L + DV+A+FVNGKP  +EA Y+M++  DWDRFMRFMERYS+
Sbjct: 45  SSVKGNITGMYLIDEEGQLVTRDVNARFVNGKPQGIEAVYIMQSKEDWDRFMRFMERYSE 104

Query: 254 ANGLQFLK 231
            NGL F K
Sbjct: 105 DNGLSFTK 112

>PSBW_PORPU (P51347) Photosystem II reaction center W protein|
          Length = 115

 Score = 94.0 bits (232), Expect = 1e-19
 Identities = 41/67 (61%), Positives = 55/67 (82%)
 Frame = -3

Query: 431 AELGDITGFYMVDEEGTLSSVDVSAKFVNGKPAAVEAKYVMRTPRDWDRFMRFMERYSQA 252
           A+ G+ITG Y++D EG + + DV+AKF+NGKP A+EA +V+++P DWDRFMRFMERY+Q 
Sbjct: 46  ADKGEITGMYLMDTEGQIITRDVNAKFINGKPQAIEAVHVIKSPDDWDRFMRFMERYAQD 105

Query: 251 NGLQFLK 231
           NGL F K
Sbjct: 106 NGLTFTK 112

>PSBW_CYAPA (P48264) Photosystem II reaction center W protein|
          Length = 112

 Score = 85.5 bits (210), Expect = 5e-17
 Identities = 36/64 (56%), Positives = 49/64 (76%)
 Frame = -3

Query: 422 GDITGFYMVDEEGTLSSVDVSAKFVNGKPAAVEAKYVMRTPRDWDRFMRFMERYSQANGL 243
           G+ITG Y++DEEG LS+  V AKF+NGKP ++EA Y+M    +W+RF+RFMERY++ N L
Sbjct: 46  GEITGLYLIDEEGELSTRTVYAKFINGKPQSIEASYIMNNREEWERFIRFMERYAKQNDL 105

Query: 242 QFLK 231
            F K
Sbjct: 106 SFTK 109

>PSBW_SYNY3 (Q55356) Photosystem II reaction center W protein (Photosystem II|
           13 kDa protein)
          Length = 112

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 33/63 (52%), Positives = 46/63 (73%)
 Frame = -3

Query: 419 DITGFYMVDEEGTLSSVDVSAKFVNGKPAAVEAKYVMRTPRDWDRFMRFMERYSQANGLQ 240
           DITG Y++D+EG + + +V  KF+NG+P A+EA  ++ +  +WDRFMRFMERY   NGL 
Sbjct: 48  DITGMYLIDDEGEIITREVKGKFINGRPTAIEATVILNSQPEWDRFMRFMERYGAENGLG 107

Query: 239 FLK 231
           F K
Sbjct: 108 FSK 110

>PSBW_CYACA (Q9TLZ2) Photosystem II reaction center W protein|
          Length = 115

 Score = 76.3 bits (186), Expect = 3e-14
 Identities = 34/68 (50%), Positives = 47/68 (69%)
 Frame = -3

Query: 434 SAELGDITGFYMVDEEGTLSSVDVSAKFVNGKPAAVEAKYVMRTPRDWDRFMRFMERYSQ 255
           S   G+ITG Y+ D+EG LS+ +V+A FVNGKP AVEA Y++R    WDR MRF+ +Y++
Sbjct: 47  SQNYGEITGMYLQDDEGELSTRNVTANFVNGKPKAVEAVYLIRNKSGWDRLMRFINKYAE 106

Query: 254 ANGLQFLK 231
              + F K
Sbjct: 107 DKNMSFYK 114

>Y1986_HALSA (Q9HNR1) UPF0286 protein Vng1986c|
          Length = 250

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = -3

Query: 395 DEEGTLSSVDVSAKFVNGKPAAVEAKYVMRTPRDWDRFMRFMERYSQAN 249
           + E     +D  A   +G P  +E K +  T   +D+  R+++RY++ N
Sbjct: 154 ERETKYGFIDFYAVDGDGTPVVIEVKRIQATLNHFDQLKRYVDRYAETN 202

>ATR_KLULA (Q6CT34) Serine/threonine-protein kinase MEC1 (EC 2.7.11.1)|
            (DNA-damage checkpoint kinase MEC1) (Mitosis entry
            checkpoint protein 1) (ATR homolog)
          Length = 2287

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = -3

Query: 410  GFYMVDEEGTLSSVDVSAKFVNGKPAAVEAKYVMRTPRDWDRFMRFMERYSQANGLQFL 234
            G YM+ E+  L  +D + +FVN  P+   AK  + T   ++R   ++E+  + +G   L
Sbjct: 1283 GTYMIQEDKVLQVLDRTERFVNTIPSDTLAKKSLETD-SFERSALYLEQSYREHGTSSL 1340


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,432,103
Number of Sequences: 219361
Number of extensions: 559119
Number of successful extensions: 1838
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1820
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1838
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)