ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags16a22 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK105970.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-E12, full insert sequence Length = 1074 Score = 186 bits (94), Expect = 6e-44 Identities = 178/206 (86%) Strand = Plus / Minus Query: 440 cgaagaacggagcaccggaagatggggcaggcgctggagacccgccagtcatacccggga 499 ||||||||||||| ||||| |||| || || || |||| || ||||||| ||||| | Sbjct: 741 cgaagaacggagccccggagaatggagcgggagcaggagcaccaccagtcacgcccggaa 682 Query: 500 tggaaatgtggcacttgctgaagggaggcgtcttgaccttgcaggcgccgggcagctgca 559 | |||| ||||||||||||||| || ||||||||||||||||| ||| |||||||||| | Sbjct: 681 tagaaaggtggcacttgctgaacggcggcgtcttgaccttgcacgcggcgggcagctgga 622 Query: 560 gggccttggtcatgttgagggcgacgccgtagtcctggccgccctggaaggcctggcaga 619 | ||||||||||||||||| | ||||||| ||| ||||| ||||||||| |||||||||| Sbjct: 621 gcgccttggtcatgttgagcgtgacgccgaagttctggctgccctggaacgcctggcaga 562 Query: 620 ggcaggccacctccttcctcaccacg 645 ||||||||||||||||| |||||||| Sbjct: 561 ggcaggccacctccttcttcaccacg 536
>dbj|AK061461.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-B10, full insert sequence Length = 1044 Score = 186 bits (94), Expect = 6e-44 Identities = 178/206 (86%) Strand = Plus / Minus Query: 440 cgaagaacggagcaccggaagatggggcaggcgctggagacccgccagtcatacccggga 499 ||||||||||||| ||||| |||| || || || |||| || ||||||| ||||| | Sbjct: 741 cgaagaacggagccccggagaatggagcgggagcaggagcaccaccagtcacgcccggaa 682 Query: 500 tggaaatgtggcacttgctgaagggaggcgtcttgaccttgcaggcgccgggcagctgca 559 | |||| ||||||||||||||| || ||||||||||||||||| ||| |||||||||| | Sbjct: 681 tagaaaggtggcacttgctgaacggcggcgtcttgaccttgcacgcggcgggcagctgga 622 Query: 560 gggccttggtcatgttgagggcgacgccgtagtcctggccgccctggaaggcctggcaga 619 | ||||||||||||||||| | ||||||| ||| ||||| ||||||||| |||||||||| Sbjct: 621 gcgccttggtcatgttgagcgtgacgccgaagttctggctgccctggaacgcctggcaga 562 Query: 620 ggcaggccacctccttcctcaccacg 645 ||||||||||||||||| |||||||| Sbjct: 561 ggcaggccacctccttcttcaccacg 536
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 172 bits (87), Expect = 9e-40 Identities = 126/139 (90%) Strand = Plus / Plus Query: 507 gtggcacttgctgaagggaggcgtcttgaccttgcaggcgccgggcagctgcagggcctt 566 ||||||||||||||| || ||||||||||||||||| ||| |||||||||| || ||||| Sbjct: 4803658 gtggcacttgctgaacggcggcgtcttgaccttgcacgcggcgggcagctggagcgcctt 4803717 Query: 567 ggtcatgttgagggcgacgccgtagtcctggccgccctggaaggcctggcagaggcaggc 626 |||||||||||| | ||||||| ||| ||||| ||||||||| ||||||||||||||||| Sbjct: 4803718 ggtcatgttgagcgtgacgccgaagttctggctgccctggaacgcctggcagaggcaggc 4803777 Query: 627 cacctccttcctcaccacg 645 |||||||||| |||||||| Sbjct: 4803778 cacctccttcttcaccacg 4803796
>gb|AC116604.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0019D17, from chromosome 3, complete sequence Length = 129658 Score = 172 bits (87), Expect = 9e-40 Identities = 126/139 (90%) Strand = Plus / Minus Query: 507 gtggcacttgctgaagggaggcgtcttgaccttgcaggcgccgggcagctgcagggcctt 566 ||||||||||||||| || ||||||||||||||||| ||| |||||||||| || ||||| Sbjct: 31797 gtggcacttgctgaacggcggcgtcttgaccttgcacgcggcgggcagctggagcgcctt 31738 Query: 567 ggtcatgttgagggcgacgccgtagtcctggccgccctggaaggcctggcagaggcaggc 626 |||||||||||| | ||||||| ||| ||||| ||||||||| ||||||||||||||||| Sbjct: 31737 ggtcatgttgagcgtgacgccgaagttctggctgccctggaacgcctggcagaggcaggc 31678 Query: 627 cacctccttcctcaccacg 645 |||||||||| |||||||| Sbjct: 31677 cacctccttcttcaccacg 31659
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 172 bits (87), Expect = 9e-40 Identities = 126/139 (90%) Strand = Plus / Plus Query: 507 gtggcacttgctgaagggaggcgtcttgaccttgcaggcgccgggcagctgcagggcctt 566 ||||||||||||||| || ||||||||||||||||| ||| |||||||||| || ||||| Sbjct: 4803773 gtggcacttgctgaacggcggcgtcttgaccttgcacgcggcgggcagctggagcgcctt 4803832 Query: 567 ggtcatgttgagggcgacgccgtagtcctggccgccctggaaggcctggcagaggcaggc 626 |||||||||||| | ||||||| ||| ||||| ||||||||| ||||||||||||||||| Sbjct: 4803833 ggtcatgttgagcgtgacgccgaagttctggctgccctggaacgcctggcagaggcaggc 4803892 Query: 627 cacctccttcctcaccacg 645 |||||||||| |||||||| Sbjct: 4803893 cacctccttcttcaccacg 4803911
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 275 gcgtcgtcgccacggtggctgcggcc 300 |||||||||||||||||||||||||| Sbjct: 1749181 gcgtcgtcgccacggtggctgcggcc 1749156
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Plus Query: 406 ggtgcggacggtgacggggacgtcgggg 433 ||||||||||||||||| |||||||||| Sbjct: 400949 ggtgcggacggtgacggagacgtcgggg 400976
>ref|XM_463623.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1182 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 337 gcggaggccgacggcgatggagc 359 ||||||||||||||||||||||| Sbjct: 912 gcggaggccgacggcgatggagc 890
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 337 gcggaggccgacggcgatggagc 359 ||||||||||||||||||||||| Sbjct: 40133081 gcggaggccgacggcgatggagc 40133103 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 337 gcggaggccgacggcgatggag 358 |||||||||||||||||||||| Sbjct: 30895743 gcggaggccgacggcgatggag 30895764 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 325 aaggcggctgcggcggaggccgacggcga 353 |||||||| ||||||| |||||||||||| Sbjct: 21734129 aaggcggcggcggcggcggccgacggcga 21734157
>dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0678F11 Length = 154292 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 337 gcggaggccgacggcgatggagc 359 ||||||||||||||||||||||| Sbjct: 76165 gcggaggccgacggcgatggagc 76187
>dbj|AK066552.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074K05, full insert sequence Length = 1419 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 337 gcggaggccgacggcgatggagc 359 ||||||||||||||||||||||| Sbjct: 1028 gcggaggccgacggcgatggagc 1006
>gb|AY110541.1| Zea mays CL4825_1 mRNA sequence Length = 837 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Minus Query: 526 ggcgtcttgaccttgcaggcgccgggcagctgcagggccttggtcatgttgagggcgacg 585 |||| ||||||||||||| ||||||| |||| ||| ||| ||||| ||||| ||||| | Sbjct: 388 ggcgccttgaccttgcagacgccggggagctccagcgccctggtctggttgatggcgatg 329 Query: 586 ccg 588 ||| Sbjct: 328 ccg 326
>ref|NM_191138.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2295 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 337 gcggaggccgacggcgatggag 358 |||||||||||||||||||||| Sbjct: 1774 gcggaggccgacggcgatggag 1795
>gb|AY496058.1| Triticum aestivum auxin transporter PIN1 mRNA, complete cds Length = 1764 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 337 gcggaggccgacggcgatggag 358 |||||||||||||||||||||| Sbjct: 1590 gcggaggccgacggcgatggag 1569
>gb|AC124429.4| Mus musculus BAC clone RP24-239N4 from chromosome 13, complete sequence Length = 168858 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 114 aatgagatatctgtataaatggattg 139 ||||||||||||||| |||||||||| Sbjct: 140650 aatgagatatctgtacaaatggattg 140625
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 337 gcggaggccgacggcgatggag 358 |||||||||||||||||||||| Sbjct: 22905433 gcggaggccgacggcgatggag 22905412
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 337 gcggaggccgacggcgatggag 358 |||||||||||||||||||||| Sbjct: 6879244 gcggaggccgacggcgatggag 6879223
>dbj|AP002972.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0638D12 Length = 161277 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 337 gcggaggccgacggcgatggag 358 |||||||||||||||||||||| Sbjct: 96110 gcggaggccgacggcgatggag 96131
>dbj|AP005522.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0479H10 Length = 139874 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 337 gcggaggccgacggcgatggag 358 |||||||||||||||||||||| Sbjct: 68769 gcggaggccgacggcgatggag 68748
>dbj|AK103208.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033122I23, full insert sequence Length = 2470 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 337 gcggaggccgacggcgatggag 358 |||||||||||||||||||||| Sbjct: 1743 gcggaggccgacggcgatggag 1722
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 337 gcggaggccgacggcgatggag 358 |||||||||||||||||||||| Sbjct: 22833624 gcggaggccgacggcgatggag 22833603
>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155568 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 337 gcggaggccgacggcgatggag 358 |||||||||||||||||||||| Sbjct: 14710 gcggaggccgacggcgatggag 14689
>emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa0040P10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 148705 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 337 gcggaggccgacggcgatggag 358 |||||||||||||||||||||| Sbjct: 51411 gcggaggccgacggcgatggag 51432
>gb|AC102365.32| Mus musculus chromosome 3, clone RP23-111A11, complete sequence Length = 208259 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 602 cctggaaggcctggcagaggc 622 ||||||||||||||||||||| Sbjct: 167999 cctggaaggcctggcagaggc 168019
>ref|NM_193585.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 963 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 325 aaggcggctgcggcggaggccgacggcga 353 |||||||| ||||||| |||||||||||| Sbjct: 508 aaggcggcggcggcggcggccgacggcga 536
>gb|AC109262.13| Mus musculus chromosome 1, clone RP23-31H15, complete sequence Length = 241579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 588 gtagtcctggccgccctggaa 608 ||||||||||||||||||||| Sbjct: 30805 gtagtcctggccgccctggaa 30825
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16 Length = 348074 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 595 tggccgccctggaaggcctgg 615 ||||||||||||||||||||| Sbjct: 287338 tggccgccctggaaggcctgg 287318
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14 Length = 344805 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 595 tggccgccctggaaggcctgg 615 ||||||||||||||||||||| Sbjct: 231568 tggccgccctggaaggcctgg 231548
>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12 Length = 348134 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 595 tggccgccctggaaggcctgg 615 ||||||||||||||||||||| Sbjct: 87409 tggccgccctggaaggcctgg 87389
>dbj|AP003141.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0002B05 Length = 141275 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 325 aaggcggctgcggcggaggccgacggcga 353 |||||||| ||||||| |||||||||||| Sbjct: 86180 aaggcggcggcggcggcggccgacggcga 86208
>dbj|AP002803.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-882I15, complete sequence Length = 125000 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 acaaatgagatatctgtataa 131 ||||||||||||||||||||| Sbjct: 115246 acaaatgagatatctgtataa 115266
>gb|AC164590.12| Mus musculus chromosome 3, clone RP23-309N14, complete sequence Length = 206984 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 602 cctggaaggcctggcagaggc 622 ||||||||||||||||||||| Sbjct: 58499 cctggaaggcctggcagaggc 58519
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 cggcggaggccgacggcgatg 355 ||||||||||||||||||||| Sbjct: 2145310 cggcggaggccgacggcgatg 2145290
>emb|AL513351.26| Mouse DNA sequence from clone RP23-122P5 on chromosome 1, complete sequence Length = 224628 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 588 gtagtcctggccgccctggaa 608 ||||||||||||||||||||| Sbjct: 71136 gtagtcctggccgccctggaa 71116
>gb|AY678264.1| Synthetic construct monomeric red fluorescent protein gene, complete cds Length = 711 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 532 ttgaccttgcaggcgccgggcagctgca 559 ||||| ||| |||||||||||||||||| Sbjct: 602 ttgacgttgtaggcgccgggcagctgca 575
>ref|NM_197079.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0029C15.21), mRNA Length = 816 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 326 aggcggctgcggcggaggccgacggcga 353 ||||||| ||||||| |||||||||||| Sbjct: 15 aggcggcggcggcggcggccgacggcga 42
>gb|AC153624.20| Mus musculus 6 BAC RP23-117P3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 224115 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 605 ggaaggcctggcagaggcag 624 |||||||||||||||||||| Sbjct: 220678 ggaaggcctggcagaggcag 220697
>gb|AC135420.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0060G17, complete sequence Length = 174949 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 cgtcgtcgccacggtggctg 295 |||||||||||||||||||| Sbjct: 854 cgtcgtcgccacggtggctg 873
>gb|AC145396.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0042F15, complete sequence Length = 162959 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 cgtcgtcgccacggtggctg 295 |||||||||||||||||||| Sbjct: 96039 cgtcgtcgccacggtggctg 96058
>gb|AC122345.4| Mus musculus BAC clone RP23-366P9 from chromosome 6, complete sequence Length = 199923 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 605 ggaaggcctggcagaggcag 624 |||||||||||||||||||| Sbjct: 65172 ggaaggcctggcagaggcag 65191
>gb|AF496378.1| Lactobacillus delbrueckii subsp. lactis xanthine phosphoribosyltransferase gene, partial cds Length = 380 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 590 agtcctggccgccctggaaggcct 613 |||| ||||||||||||||||||| Sbjct: 327 agtcgtggccgccctggaaggcct 304
>emb|AL451010.4| Human DNA sequence from clone RP11-163M2 on chromosome 1 Contains a novel gene, a pseudogene similar to part of actin, beta (ACTB), the GLMN gene for glomulin, FKBP associated protein and a novel gene (FLJ13150), complete sequence Length = 184144 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 attaaatgagagttgcctgttggc 26 |||||||||||| ||||||||||| Sbjct: 53260 attaaatgagagatgcctgttggc 53283
>gb|AC091871.2| Homo sapiens chromosome 5 clone CTD-2502G1, complete sequence Length = 87034 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 71 aaacacgccatgtttatgaagggc 94 ||||| |||||||||||||||||| Sbjct: 20424 aaacaagccatgtttatgaagggc 20447
>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence, complete sequence Length = 148816 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 326 aggcggctgcggcggaggccgacggcga 353 ||||||| ||||||| |||||||||||| Sbjct: 63938 aggcggcggcggcggcggccgacggcga 63965
>ref|XM_693139.1| PREDICTED: Danio rerio similar to Solute carrier organic anion transporter family, member 3a1 (LOC569735), mRNA Length = 1626 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 gcagcaaagccagcaacaac 191 |||||||||||||||||||| Sbjct: 578 gcagcaaagccagcaacaac 559
>ref|XM_684587.1| PREDICTED: Danio rerio similar to Solute carrier organic anion transporter family, member 3A1 (Solute carrier family 21, member 11) (Sodium-independent organic anion transporter D) (Organic anion transporting polypeptide D) (OATP-D) (Prostaglandin transporter subtype 2)... (LOC561180), partial mRNA Length = 1573 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 gcagcaaagccagcaacaac 191 |||||||||||||||||||| Sbjct: 1508 gcagcaaagccagcaacaac 1489
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 326 aggcggctgcggcggaggccgacggcga 353 ||||||| ||||||| |||||||||||| Sbjct: 17868103 aggcggcggcggcggcggccgacggcga 17868076
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 ggggaaggcggctgcggcgg 340 |||||||||||||||||||| Sbjct: 12628217 ggggaaggcggctgcggcgg 12628236
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 cgtcgtcgccacggtggctg 295 |||||||||||||||||||| Sbjct: 7911264 cgtcgtcgccacggtggctg 7911283
>gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR class RGA, HCBT-like putative defense response protein, and putative alliin lyase genes, complete cds; and unknown genes Length = 106618 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 gcggcggaggccgacggcga 353 |||||||||||||||||||| Sbjct: 83413 gcggcggaggccgacggcga 83394
>dbj|AP005438.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1723_B06 Length = 136853 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 ggggaaggcggctgcggcgg 340 |||||||||||||||||||| Sbjct: 112910 ggggaaggcggctgcggcgg 112929
>dbj|AP004305.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0492E07 Length = 143794 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 321 ggggaaggcggctgcggcgg 340 |||||||||||||||||||| Sbjct: 2687 ggggaaggcggctgcggcgg 2706
>ref|XM_552320.1| Anopheles gambiae str. PEST ENSANGP00000029516 (ENSANGG00000023484), partial mRNA Length = 509 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 365 cggtggtggagtcgccgcttccggctgg 392 ||||||||||| || ||||||||||||| Sbjct: 437 cggtggtggagccgtcgcttccggctgg 464
>emb|BX649578.14| Zebrafish DNA sequence from clone CH211-196L7 in linkage group 18, complete sequence Length = 211922 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 gcagcaaagccagcaacaac 191 |||||||||||||||||||| Sbjct: 37065 gcagcaaagccagcaacaac 37046
>gb|DQ322635.1| YFV replicon vector prME-def, complete sequence Length = 12687 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 532 ttgaccttgcaggcgccgggcagctgca 559 ||||| ||| |||||||||||||||||| Sbjct: 1108 ttgacgttgtaggcgccgggcagctgca 1081
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 326 aggcggctgcggcggaggccgacggcga 353 ||||||| ||||||| |||||||||||| Sbjct: 17877356 aggcggcggcggcggcggccgacggcga 17877329
>dbj|AP005231.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-78G22, complete sequence Length = 102488 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 caggcagcaaagccagcaac 188 |||||||||||||||||||| Sbjct: 24733 caggcagcaaagccagcaac 24714 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,330,997 Number of Sequences: 3902068 Number of extensions: 5330997 Number of successful extensions: 113599 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 59 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 112552 Number of HSP's gapped (non-prelim): 1047 length of query: 648 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 625 effective length of database: 17,143,297,704 effective search space: 10714561065000 effective search space used: 10714561065000 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
