ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags16a15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_468773.1| Oryza sativa (japonica cultivar-group), mRNA 323 3e-85
2dbj|AK069123.1| Oryza sativa (japonica cultivar-group) cDNA clon... 323 3e-85
3dbj|AK060637.1| Oryza sativa (japonica cultivar-group) cDNA clon... 323 3e-85
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 184 2e-43
5gb|AC137999.2| Oryza sativa chromosome 3 BAC OSJNBa0020H02 genom... 184 2e-43
6gb|AC133398.4| Oryza sativa chromosome 3 BAC OSJNBa0083F15 genom... 184 2e-43
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 184 2e-43
8gb|AY107812.1| Zea mays PCO119122 mRNA sequence 157 4e-35
9dbj|AB219939.1| Lycopersicon esculentum LeHSP110/ClpB mRNA for h... 64 5e-07
10ref|NM_128071.2| Arabidopsis thaliana ATP binding / ATPase/ nucl... 42 1.7
11emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segmen... 42 1.7
12gb|AY070722.1| Arabidopsis thaliana At2g25140/F13D4.100 mRNA, co... 42 1.7
13dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
14dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
15gb|BT002223.1| Arabidopsis thaliana At2g25140/F13D4.100 mRNA, co... 42 1.7
16gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 6.7
17ref|NG_000004.2| Homo sapiens cytochrome P450, family 3, subfami... 40 6.7
18gb|AC146392.5| Pan troglodytes BAC clone RP43-57L13 from 7, comp... 40 6.7
19gb|AC011904.3| Homo sapiens BAC clone CTD-3244O18 from 7, comple... 40 6.7
20ref|XM_747822.1| Aspergillus fumigatus Af293 C6 transcription fa... 40 6.7
21gb|AC134559.5| Mus musculus BAC clone RP24-332C4 from chromosome... 40 6.7
22ref|XM_531833.2| PREDICTED: Canis familiaris similar to CG9351-P... 40 6.7
23gb|AC125181.4| Mus musculus BAC clone RP23-324L6 from chromosome... 40 6.7
24gb|BC006215.2| Homo sapiens KIAA1387 protein, mRNA (cDNA clone M... 40 6.7
25ref|NM_020463.1| Homo sapiens KIAA1387 protein (SMEK2), mRNA 40 6.7
26gb|BC060855.1| Homo sapiens KIAA1387 protein, mRNA (cDNA clone M... 40 6.7
27emb|AL136556.1|HSM801530 Homo sapiens mRNA; cDNA DKFZp761I0112 (... 40 6.7
28emb|AL606482.14| Mouse DNA sequence from clone RP23-360H16 on ch... 40 6.7
29dbj|AK098321.1| Homo sapiens cDNA FLJ41002 fis, clone UTERU2016979 40 6.7
30dbj|AK023148.1| Homo sapiens cDNA FLJ13086 fis, clone NT2RP3002097 40 6.7
31gb|CP000249.1| Frankia sp. CcI3, complete genome 40 6.7
32dbj|AK007690.1| Mus musculus 10 day old male pancreas cDNA, RIKE... 40 6.7
33gb|AF280107.1|AF280107 Homo sapiens cytochrome P450 polypeptide ... 40 6.7
34gb|AC015982.9| Homo sapiens BAC clone RP11-554J4 from 2, complet... 40 6.7
35gb|AC147220.3| Mus musculus BAC clone RP23-51A20 from chromosome... 40 6.7
36dbj|AK026437.1| Homo sapiens cDNA: FLJ22784 fis, clone KAIA2048 40 6.7
37gb|AC140306.3| Mus musculus BAC clone RP23-386L13 from 8, comple... 40 6.7
38emb|AL122106.1|HSM801263 Homo sapiens mRNA; cDNA DKFZp434D1227 (... 40 6.7
39emb|AL928963.8| Mouse DNA sequence from clone RP23-5K9 on chromo... 40 6.7
40dbj|AB037808.1| Homo sapiens mRNA for KIAA1387 protein, partial cds 40 6.7 
>ref|XM_468773.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3546

 Score =  323 bits (163), Expect = 3e-85
 Identities = 392/470 (83%)
 Strand = Plus / Minus

                                                                        
Query: 4    ttctcgtcttgagcagcagccggcttggattcctcgttcatcttccggaagacaagcttc 63
            |||||||||| ||||||||| ||   |||||| ||  |||| ||  |||| || ||||| 
Sbjct: 3155 ttctcgtcttcagcagcagctggtgcggattcttcactcattttgtggaaaacgagcttt 3096

                                                                        
Query: 64   tgctgggggagctgtccgttcgacggcaccgtcacctgagtgtcgacggagatgctgtcc 123
            ||||| |||||||| || || || ||||| || ||||| ||||| ||   ||||||||||
Sbjct: 3095 tgctgagggagctgaccattagatggcacggtgacctgggtgtctaccaggatgctgtcc 3036

                                                                        
Query: 124  tcgtccttgaactcgcctctgaggatacccttggccagttcgttctccacgtactgctgg 183
            ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| ||||| || 
Sbjct: 3035 tcgtccttgaaatcacctctcaggatacccttcgccagctcgttctccacatactgttga 2976

                                                                        
Query: 184  agcactcgcttcactggcctggcaccgtagttggggtcgtagccaaggcttcccaggaac 243
            | ||||||||||||||||||||||||||| || || ||||| ||||||||||||||||| 
Sbjct: 2975 atcactcgcttcactggcctggcaccgtaattcggatcgtaaccaaggcttcccaggaat 2916

                                                                        
Query: 244  tcgattgctgacggtgagacgtcgagtttgatcttgcggtcggcgatcctcttctgcact 303
            |||| ||||   || || || ||||||||||||||||| ||||| || || || || |||
Sbjct: 2915 tcgactgctccaggcgacacttcgagtttgatcttgcgatcggcaattcttttttgtact 2856

                                                                        
Query: 304  cttgccaactgtaatttcacaatgctgtttatctgcttcctctcaagaggcttgaagacg 363
            ||||| | ||||||||| ||||||||||| ||||| | ||||||||| ||||||||||| 
Sbjct: 2855 cttgcaagctgtaatttgacaatgctgttgatctgttccctctcaagtggcttgaagaca 2796

                                                                        
Query: 364  atgtactcgtncacacgattcatgaactcangacggaaaacagatcttgcagcatccatc 423
            |||||||| |  |  ||||||||||||||  |||||||||||||||||||||||||||||
Sbjct: 2795 atgtactcatcaatccgattcatgaactccggacggaaaacagatcttgcagcatccatc 2736

                                                              
Query: 424  actctcttnttcatactctcgtangccgaatcagttgctccaccttnttc 473
            || ||||| || ||| |||| || || ||||||||||  ||||||| |||
Sbjct: 2735 accctcttctttatattctcataggctgaatcagttgacccaccttcttc 2686
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>dbj|AK069123.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023007C17, full
            insert sequence
          Length = 3303

 Score =  323 bits (163), Expect = 3e-85
 Identities = 392/470 (83%)
 Strand = Plus / Minus

                                                                        
Query: 4    ttctcgtcttgagcagcagccggcttggattcctcgttcatcttccggaagacaagcttc 63
            |||||||||| ||||||||| ||   |||||| ||  |||| ||  |||| || ||||| 
Sbjct: 3155 ttctcgtcttcagcagcagctggtgcggattcttcactcattttgtggaaaacgagcttt 3096

                                                                        
Query: 64   tgctgggggagctgtccgttcgacggcaccgtcacctgagtgtcgacggagatgctgtcc 123
            ||||| |||||||| || || || ||||| || ||||| ||||| ||   ||||||||||
Sbjct: 3095 tgctgagggagctgaccattagatggcacggtgacctgggtgtctaccaggatgctgtcc 3036

                                                                        
Query: 124  tcgtccttgaactcgcctctgaggatacccttggccagttcgttctccacgtactgctgg 183
            ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| ||||| || 
Sbjct: 3035 tcgtccttgaaatcacctctcaggatacccttcgccagctcgttctccacatactgttga 2976

                                                                        
Query: 184  agcactcgcttcactggcctggcaccgtagttggggtcgtagccaaggcttcccaggaac 243
            | ||||||||||||||||||||||||||| || || ||||| ||||||||||||||||| 
Sbjct: 2975 atcactcgcttcactggcctggcaccgtaattcggatcgtaaccaaggcttcccaggaat 2916

                                                                        
Query: 244  tcgattgctgacggtgagacgtcgagtttgatcttgcggtcggcgatcctcttctgcact 303
            |||| ||||   || || || ||||||||||||||||| ||||| || || || || |||
Sbjct: 2915 tcgactgctccaggcgacacttcgagtttgatcttgcgatcggcaattcttttttgtact 2856

                                                                        
Query: 304  cttgccaactgtaatttcacaatgctgtttatctgcttcctctcaagaggcttgaagacg 363
            ||||| | ||||||||| ||||||||||| ||||| | ||||||||| ||||||||||| 
Sbjct: 2855 cttgcaagctgtaatttgacaatgctgttgatctgttccctctcaagtggcttgaagaca 2796

                                                                        
Query: 364  atgtactcgtncacacgattcatgaactcangacggaaaacagatcttgcagcatccatc 423
            |||||||| |  |  ||||||||||||||  |||||||||||||||||||||||||||||
Sbjct: 2795 atgtactcatcaatccgattcatgaactccggacggaaaacagatcttgcagcatccatc 2736

                                                              
Query: 424  actctcttnttcatactctcgtangccgaatcagttgctccaccttnttc 473
            || ||||| || ||| |||| || || ||||||||||  ||||||| |||
Sbjct: 2735 accctcttctttatattctcataggctgaatcagttgacccaccttcttc 2686
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>dbj|AK060637.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-D01, full
            insert sequence
          Length = 2290

 Score =  323 bits (163), Expect = 3e-85
 Identities = 392/470 (83%)
 Strand = Plus / Minus

                                                                        
Query: 4    ttctcgtcttgagcagcagccggcttggattcctcgttcatcttccggaagacaagcttc 63
            |||||||||| ||||||||| ||   |||||| ||  |||| ||  |||| || ||||| 
Sbjct: 2109 ttctcgtcttcagcagcagctggtgcggattcttcactcattttgtggaaaacgagcttt 2050

                                                                        
Query: 64   tgctgggggagctgtccgttcgacggcaccgtcacctgagtgtcgacggagatgctgtcc 123
            ||||| |||||||| || || || ||||| || ||||| ||||| ||   ||||||||||
Sbjct: 2049 tgctgagggagctgaccattagatggcacggtgacctgggtgtctaccaggatgctgtcc 1990

                                                                        
Query: 124  tcgtccttgaactcgcctctgaggatacccttggccagttcgttctccacgtactgctgg 183
            ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| ||||| || 
Sbjct: 1989 tcgtccttgaaatcacctctcaggatacccttcgccagctcgttctccacatactgttga 1930

                                                                        
Query: 184  agcactcgcttcactggcctggcaccgtagttggggtcgtagccaaggcttcccaggaac 243
            | ||||||||||||||||||||||||||| || || ||||| ||||||||||||||||| 
Sbjct: 1929 atcactcgcttcactggcctggcaccgtaattcggatcgtaaccaaggcttcccaggaat 1870

                                                                        
Query: 244  tcgattgctgacggtgagacgtcgagtttgatcttgcggtcggcgatcctcttctgcact 303
            |||| ||||   || || || ||||||||||||||||| ||||| || || || || |||
Sbjct: 1869 tcgactgctccaggcgacacttcgagtttgatcttgcgatcggcaattcttttttgtact 1810

                                                                        
Query: 304  cttgccaactgtaatttcacaatgctgtttatctgcttcctctcaagaggcttgaagacg 363
            ||||| | ||||||||| ||||||||||| ||||| | ||||||||| ||||||||||| 
Sbjct: 1809 cttgcaagctgtaatttgacaatgctgttgatctgttccctctcaagtggcttgaagaca 1750

                                                                        
Query: 364  atgtactcgtncacacgattcatgaactcangacggaaaacagatcttgcagcatccatc 423
            |||||||| |  |  ||||||||||||||  |||||||||||||||||||||||||||||
Sbjct: 1749 atgtactcatcaatccgattcatgaactccggacggaaaacagatcttgcagcatccatc 1690

                                                              
Query: 424  actctcttnttcatactctcgtangccgaatcagttgctccaccttnttc 473
            || ||||| || ||| |||| || || ||||||||||  ||||||| |||
Sbjct: 1689 accctcttctttatattctcataggctgaatcagttgacccaccttcttc 1640
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  184 bits (93), Expect = 2e-43
 Identities = 252/305 (82%)
 Strand = Plus / Minus

                                                                            
Query: 4        ttctcgtcttgagcagcagccggcttggattcctcgttcatcttccggaagacaagcttc 63
                |||||||||| ||||||||| ||   |||||| ||  |||| ||  |||| || ||||| 
Sbjct: 17651152 ttctcgtcttcagcagcagctggtgcggattcttcactcattttgtggaaaacgagcttt 17651093

                                                                            
Query: 64       tgctgggggagctgtccgttcgacggcaccgtcacctgagtgtcgacggagatgctgtcc 123
                ||||| |||||||| || || || ||||| || ||||| ||||| ||   ||||||||||
Sbjct: 17651092 tgctgagggagctgaccattagatggcacggtgacctgggtgtctaccaggatgctgtcc 17651033

                                                                            
Query: 124      tcgtccttgaactcgcctctgaggatacccttggccagttcgttctccacgtactgctgg 183
                ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| ||||| || 
Sbjct: 17651032 tcgtccttgaaatcacctctcaggatacccttcgccagctcgttctccacatactgttga 17650973

                                                                            
Query: 184      agcactcgcttcactggcctggcaccgtagttggggtcgtagccaaggcttcccaggaac 243
                | ||||||||||||||||||||||||||| || || ||||| ||||||||||||||||| 
Sbjct: 17650972 atcactcgcttcactggcctggcaccgtaattcggatcgtaaccaaggcttcccaggaat 17650913

                                                                            
Query: 244      tcgattgctgacggtgagacgtcgagtttgatcttgcggtcggcgatcctcttctgcact 303
                |||| ||||   || || || ||||||||||||||||| ||||| || || || || |||
Sbjct: 17650912 tcgactgctccaggcgacacttcgagtttgatcttgcgatcggcaattcttttttgtact 17650853

                     
Query: 304      cttgc 308
                |||||
Sbjct: 17650852 cttgc 17650848



 Score =  149 bits (75), Expect = 1e-32
 Identities = 139/162 (85%)
 Strand = Plus / Minus

                                                                            
Query: 312      ctgtaatttcacaatgctgtttatctgcttcctctcaagaggcttgaagacgatgtactc 371
                ||||||||| ||||||||||| ||||| | ||||||||| ||||||||||| ||||||||
Sbjct: 17650696 ctgtaatttgacaatgctgttgatctgttccctctcaagtggcttgaagacaatgtactc 17650637

                                                                            
Query: 372      gtncacacgattcatgaactcangacggaaaacagatcttgcagcatccatcactctctt 431
                 |  |  ||||||||||||||  ||||||||||||||||||||||||||||||| |||||
Sbjct: 17650636 atcaatccgattcatgaactccggacggaaaacagatcttgcagcatccatcaccctctt 17650577

                                                          
Query: 432      nttcatactctcgtangccgaatcagttgctccaccttnttc 473
                 || ||| |||| || || ||||||||||  ||||||| |||
Sbjct: 17650576 ctttatattctcataggctgaatcagttgacccaccttcttc 17650535
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>gb|AC137999.2| Oryza sativa chromosome 3 BAC OSJNBa0020H02 genomic sequence,
            complete sequence
          Length = 97152

 Score =  184 bits (93), Expect = 2e-43
 Identities = 252/305 (82%)
 Strand = Plus / Plus

                                                                        
Query: 4    ttctcgtcttgagcagcagccggcttggattcctcgttcatcttccggaagacaagcttc 63
            |||||||||| ||||||||| ||   |||||| ||  |||| ||  |||| || ||||| 
Sbjct: 3925 ttctcgtcttcagcagcagctggtgcggattcttcactcattttgtggaaaacgagcttt 3984

                                                                        
Query: 64   tgctgggggagctgtccgttcgacggcaccgtcacctgagtgtcgacggagatgctgtcc 123
            ||||| |||||||| || || || ||||| || ||||| ||||| ||   ||||||||||
Sbjct: 3985 tgctgagggagctgaccattagatggcacggtgacctgggtgtctaccaggatgctgtcc 4044

                                                                        
Query: 124  tcgtccttgaactcgcctctgaggatacccttggccagttcgttctccacgtactgctgg 183
            ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| ||||| || 
Sbjct: 4045 tcgtccttgaaatcacctctcaggatacccttcgccagctcgttctccacatactgttga 4104

                                                                        
Query: 184  agcactcgcttcactggcctggcaccgtagttggggtcgtagccaaggcttcccaggaac 243
            | ||||||||||||||||||||||||||| || || ||||| ||||||||||||||||| 
Sbjct: 4105 atcactcgcttcactggcctggcaccgtaattcggatcgtaaccaaggcttcccaggaat 4164

                                                                        
Query: 244  tcgattgctgacggtgagacgtcgagtttgatcttgcggtcggcgatcctcttctgcact 303
            |||| ||||   || || || ||||||||||||||||| ||||| || || || || |||
Sbjct: 4165 tcgactgctccaggcgacacttcgagtttgatcttgcgatcggcaattcttttttgtact 4224

                 
Query: 304  cttgc 308
            |||||
Sbjct: 4225 cttgc 4229



 Score =  149 bits (75), Expect = 1e-32
 Identities = 139/162 (85%)
 Strand = Plus / Plus

                                                                        
Query: 312  ctgtaatttcacaatgctgtttatctgcttcctctcaagaggcttgaagacgatgtactc 371
            ||||||||| ||||||||||| ||||| | ||||||||| ||||||||||| ||||||||
Sbjct: 4381 ctgtaatttgacaatgctgttgatctgttccctctcaagtggcttgaagacaatgtactc 4440

                                                                        
Query: 372  gtncacacgattcatgaactcangacggaaaacagatcttgcagcatccatcactctctt 431
             |  |  ||||||||||||||  ||||||||||||||||||||||||||||||| |||||
Sbjct: 4441 atcaatccgattcatgaactccggacggaaaacagatcttgcagcatccatcaccctctt 4500

                                                      
Query: 432  nttcatactctcgtangccgaatcagttgctccaccttnttc 473
             || ||| |||| || || ||||||||||  ||||||| |||
Sbjct: 4501 ctttatattctcataggctgaatcagttgacccaccttcttc 4542
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>gb|AC133398.4| Oryza sativa chromosome 3 BAC OSJNBa0083F15 genomic sequence, complete
              sequence
          Length = 136916

 Score =  184 bits (93), Expect = 2e-43
 Identities = 252/305 (82%)
 Strand = Plus / Plus

                                                                          
Query: 4      ttctcgtcttgagcagcagccggcttggattcctcgttcatcttccggaagacaagcttc 63
              |||||||||| ||||||||| ||   |||||| ||  |||| ||  |||| || ||||| 
Sbjct: 132855 ttctcgtcttcagcagcagctggtgcggattcttcactcattttgtggaaaacgagcttt 132914

                                                                          
Query: 64     tgctgggggagctgtccgttcgacggcaccgtcacctgagtgtcgacggagatgctgtcc 123
              ||||| |||||||| || || || ||||| || ||||| ||||| ||   ||||||||||
Sbjct: 132915 tgctgagggagctgaccattagatggcacggtgacctgggtgtctaccaggatgctgtcc 132974

                                                                          
Query: 124    tcgtccttgaactcgcctctgaggatacccttggccagttcgttctccacgtactgctgg 183
              ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| ||||| || 
Sbjct: 132975 tcgtccttgaaatcacctctcaggatacccttcgccagctcgttctccacatactgttga 133034

                                                                          
Query: 184    agcactcgcttcactggcctggcaccgtagttggggtcgtagccaaggcttcccaggaac 243
              | ||||||||||||||||||||||||||| || || ||||| ||||||||||||||||| 
Sbjct: 133035 atcactcgcttcactggcctggcaccgtaattcggatcgtaaccaaggcttcccaggaat 133094

                                                                          
Query: 244    tcgattgctgacggtgagacgtcgagtttgatcttgcggtcggcgatcctcttctgcact 303
              |||| ||||   || || || ||||||||||||||||| ||||| || || || || |||
Sbjct: 133095 tcgactgctccaggcgacacttcgagtttgatcttgcgatcggcaattcttttttgtact 133154

                   
Query: 304    cttgc 308
              |||||
Sbjct: 133155 cttgc 133159



 Score =  149 bits (75), Expect = 1e-32
 Identities = 139/162 (85%)
 Strand = Plus / Plus

                                                                          
Query: 312    ctgtaatttcacaatgctgtttatctgcttcctctcaagaggcttgaagacgatgtactc 371
              ||||||||| ||||||||||| ||||| | ||||||||| ||||||||||| ||||||||
Sbjct: 133311 ctgtaatttgacaatgctgttgatctgttccctctcaagtggcttgaagacaatgtactc 133370

                                                                          
Query: 372    gtncacacgattcatgaactcangacggaaaacagatcttgcagcatccatcactctctt 431
               |  |  ||||||||||||||  ||||||||||||||||||||||||||||||| |||||
Sbjct: 133371 atcaatccgattcatgaactccggacggaaaacagatcttgcagcatccatcaccctctt 133430

                                                        
Query: 432    nttcatactctcgtangccgaatcagttgctccaccttnttc 473
               || ||| |||| || || ||||||||||  ||||||| |||
Sbjct: 133431 ctttatattctcataggctgaatcagttgacccaccttcttc 133472
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  184 bits (93), Expect = 2e-43
 Identities = 252/305 (82%)
 Strand = Plus / Minus

                                                                            
Query: 4        ttctcgtcttgagcagcagccggcttggattcctcgttcatcttccggaagacaagcttc 63
                |||||||||| ||||||||| ||   |||||| ||  |||| ||  |||| || ||||| 
Sbjct: 17644693 ttctcgtcttcagcagcagctggtgcggattcttcactcattttgtggaaaacgagcttt 17644634

                                                                            
Query: 64       tgctgggggagctgtccgttcgacggcaccgtcacctgagtgtcgacggagatgctgtcc 123
                ||||| |||||||| || || || ||||| || ||||| ||||| ||   ||||||||||
Sbjct: 17644633 tgctgagggagctgaccattagatggcacggtgacctgggtgtctaccaggatgctgtcc 17644574

                                                                            
Query: 124      tcgtccttgaactcgcctctgaggatacccttggccagttcgttctccacgtactgctgg 183
                ||||||||||| || ||||| ||||||||||| ||||| ||||||||||| ||||| || 
Sbjct: 17644573 tcgtccttgaaatcacctctcaggatacccttcgccagctcgttctccacatactgttga 17644514

                                                                            
Query: 184      agcactcgcttcactggcctggcaccgtagttggggtcgtagccaaggcttcccaggaac 243
                | ||||||||||||||||||||||||||| || || ||||| ||||||||||||||||| 
Sbjct: 17644513 atcactcgcttcactggcctggcaccgtaattcggatcgtaaccaaggcttcccaggaat 17644454

                                                                            
Query: 244      tcgattgctgacggtgagacgtcgagtttgatcttgcggtcggcgatcctcttctgcact 303
                |||| ||||   || || || ||||||||||||||||| ||||| || || || || |||
Sbjct: 17644453 tcgactgctccaggcgacacttcgagtttgatcttgcgatcggcaattcttttttgtact 17644394

                     
Query: 304      cttgc 308
                |||||
Sbjct: 17644393 cttgc 17644389



 Score =  149 bits (75), Expect = 1e-32
 Identities = 139/162 (85%)
 Strand = Plus / Minus

                                                                            
Query: 312      ctgtaatttcacaatgctgtttatctgcttcctctcaagaggcttgaagacgatgtactc 371
                ||||||||| ||||||||||| ||||| | ||||||||| ||||||||||| ||||||||
Sbjct: 17644237 ctgtaatttgacaatgctgttgatctgttccctctcaagtggcttgaagacaatgtactc 17644178

                                                                            
Query: 372      gtncacacgattcatgaactcangacggaaaacagatcttgcagcatccatcactctctt 431
                 |  |  ||||||||||||||  ||||||||||||||||||||||||||||||| |||||
Sbjct: 17644177 atcaatccgattcatgaactccggacggaaaacagatcttgcagcatccatcaccctctt 17644118

                                                          
Query: 432      nttcatactctcgtangccgaatcagttgctccaccttnttc 473
                 || ||| |||| || || ||||||||||  ||||||| |||
Sbjct: 17644117 ctttatattctcataggctgaatcagttgacccaccttcttc 17644076
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>gb|AY107812.1| Zea mays PCO119122 mRNA sequence
          Length = 696

 Score =  157 bits (79), Expect = 4e-35
 Identities = 214/259 (82%)
 Strand = Plus / Plus

                                                                       
Query: 46  ttccggaagacaagcttctgctgggggagctgtccgttcgacggcaccgtcacctgagtg 105
           |||||||| || |||||||| || || ||||| ||||| || |||||||| ||||| |||
Sbjct: 428 ttccggaaaactagcttctgttgcggaagctggccgttagagggcaccgtgacctgggtg 487

                                                                       
Query: 106 tcgacggagatgctgtcctcgtccttgaactcgcctctgaggatacccttggccagttcg 165
           || ||  |||||||||||||||||||||| || ||||||||||| ||||| || ||||||
Sbjct: 488 tccacaaagatgctgtcctcgtccttgaaatcacctctgaggatgcccttcgcgagttcg 547

                                                                       
Query: 166 ttctccacgtactgctggagcactcgcttcactggcctggcaccgtagttggggtcgtag 225
           |||||||||| ||| || | ||||| |||||| ||||| || || ||||| ||||| || 
Sbjct: 548 ttctccacgtgctgttgaatcactctcttcaccggcctcgcgccatagttcgggtcatac 607

                                                                       
Query: 226 ccaaggcttcccaggaactcgattgctgacggtgagacgtcgagtttgatcttgcggtcg 285
           || |||||||||| ||| || || ||    |||||||| || || ||||| |||||||| 
Sbjct: 608 cccaggcttcccaagaattcaatagcaccgggtgagacttccagcttgattttgcggtct 667

                              
Query: 286 gcgatcctcttctgcactc 304
           |||||||||||||| ||||
Sbjct: 668 gcgatcctcttctgtactc 686
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>dbj|AB219939.1| Lycopersicon esculentum LeHSP110/ClpB mRNA for heat shock protein,
            complete cds
          Length = 3144

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 95/116 (81%)
 Strand = Plus / Minus

                                                                        
Query: 121  tcctcgtccttgaactcgcctctgaggatacccttggccagttcgttctccacgtactgc 180
            ||||| |||||||| || ||||| |  || || ||||||| ||||||||| || | ||||
Sbjct: 2831 tcctcatccttgaattctcctcttaatattcctttggccaattcgttctcaacattctgc 2772

                                                                    
Query: 181  tggagcactcgcttcactggcctggcaccgtagttggggtcgtagccaaggcttcc 236
            |||| ||| |||||||||||||  || || ||||||||||| || ||||| |||||
Sbjct: 2771 tggatcacccgcttcactggccgtgctccatagttggggtcataaccaagacttcc 2716



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                        
Query: 382  ttcatgaactcangacggaaaacagatcttgcagcatccatcac 425
            |||||||||||| | |||||||| |  | |||||||||||||||
Sbjct: 2570 ttcatgaactcagggcggaaaactgcacgtgcagcatccatcac 2527
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>ref|NM_128071.2| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/
            nucleotide binding / protein binding AT2G25140 mRNA,
            complete cds
          Length = 3223

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 186  cactcgcttcactggcctggcaccgtagttggggtcgtagccaag 230
            |||||||||||| ||||| || |||||||| |||||  |||||||
Sbjct: 2887 cactcgcttcaccggccttgccccgtagttagggtcaaagccaag 2843
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>emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segment 1/7
          Length = 348764

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 168   ctccacgtactgctggagcac 188
             |||||||||||||||||||||
Sbjct: 23702 ctccacgtactgctggagcac 23722
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>gb|AY070722.1| Arabidopsis thaliana At2g25140/F13D4.100 mRNA, complete cds
          Length = 3223

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 186  cactcgcttcactggcctggcaccgtagttggggtcgtagccaag 230
            |||||||||||| ||||| || |||||||| |||||  |||||||
Sbjct: 2887 cactcgcttcaccggccttgccccgtagttagggtcaaagccaag 2843
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                            
Query: 177     ctgctggagcactcgcttcactggcctggcaccgtagttggggtc 221
               |||||||| ||| | |||||| ||||| ||||||||||| |||||
Sbjct: 4568010 ctgctggatcaccctcttcacaggcctagcaccgtagttagggtc 4568054
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>dbj|AP004087.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1297_C09
          Length = 163378

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                           
Query: 177    ctgctggagcactcgcttcactggcctggcaccgtagttggggtc 221
              |||||||| ||| | |||||| ||||| ||||||||||| |||||
Sbjct: 103389 ctgctggatcaccctcttcacaggcctagcaccgtagttagggtc 103433
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>gb|BT002223.1| Arabidopsis thaliana At2g25140/F13D4.100 mRNA, complete cds
          Length = 2895

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                         
Query: 186  cactcgcttcactggcctggcaccgtagttggggtcgtagccaag 230
            |||||||||||| ||||| || |||||||| |||||  |||||||
Sbjct: 2733 cactcgcttcaccggccttgccccgtagttagggtcaaagccaag 2689
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 271     ttgatcttgcggtcggcgat 290
               ||||||||||||||||||||
Sbjct: 4213488 ttgatcttgcggtcggcgat 4213507
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>ref|NG_000004.2| Homo sapiens cytochrome P450, family 3, subfamily A (CYP3A) on
             chromosome 7
          Length = 428605

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 312   ctgtaatttcacaatgctgt 331
             ||||||||||||||||||||
Sbjct: 90336 ctgtaatttcacaatgctgt 90317
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>gb|AC146392.5| Pan troglodytes BAC clone RP43-57L13 from 7, complete sequence
          Length = 170470

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 312   ctgtaatttcacaatgctgt 331
             ||||||||||||||||||||
Sbjct: 84262 ctgtaatttcacaatgctgt 84243
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>gb|AC011904.3| Homo sapiens BAC clone CTD-3244O18 from 7, complete sequence
          Length = 113879

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 312   ctgtaatttcacaatgctgt 331
             ||||||||||||||||||||
Sbjct: 90336 ctgtaatttcacaatgctgt 90317
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>ref|XM_747822.1| Aspergillus fumigatus Af293 C6 transcription factor UaY (Afu1g15470)
            partial mRNA
          Length = 3267

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 54   gacaagcttctgctggggga 73
            ||||||||||||||||||||
Sbjct: 2437 gacaagcttctgctggggga 2418
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>gb|AC134559.5| Mus musculus BAC clone RP24-332C4 from chromosome 8, complete sequence
          Length = 180692

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 315    taatttcacaatgctgttta 334
              ||||||||||||||||||||
Sbjct: 164186 taatttcacaatgctgttta 164167
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>ref|XM_531833.2| PREDICTED: Canis familiaris similar to CG9351-PA, isoform A
            (LOC474603), mRNA
          Length = 3441

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 229  aggcttcccaggaactcgattgct 252
            |||||||||||||||| |||||||
Sbjct: 3379 aggcttcccaggaacttgattgct 3402
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>gb|AC125181.4| Mus musculus BAC clone RP23-324L6 from chromosome 8, complete sequence
          Length = 223306

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 315   taatttcacaatgctgttta 334
             ||||||||||||||||||||
Sbjct: 41673 taatttcacaatgctgttta 41654
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>gb|BC006215.2| Homo sapiens KIAA1387 protein, mRNA (cDNA clone MGC:2579
            IMAGE:3140319), complete cds
          Length = 3282

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 229  aggcttcccaggaactcgattgct 252
            |||||||||||||||| |||||||
Sbjct: 2928 aggcttcccaggaacttgattgct 2951
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>ref|NM_020463.1| Homo sapiens KIAA1387 protein (SMEK2), mRNA
          Length = 4172

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 229  aggcttcccaggaactcgattgct 252
            |||||||||||||||| |||||||
Sbjct: 2787 aggcttcccaggaacttgattgct 2810
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>gb|BC060855.1| Homo sapiens KIAA1387 protein, mRNA (cDNA clone MGC:71778
            IMAGE:5259789), complete cds
          Length = 4172

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 229  aggcttcccaggaactcgattgct 252
            |||||||||||||||| |||||||
Sbjct: 2787 aggcttcccaggaacttgattgct 2810
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>emb|AL136556.1|HSM801530 Homo sapiens mRNA; cDNA DKFZp761I0112 (from clone DKFZp761I0112)
          Length = 2528

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 229  aggcttcccaggaactcgattgct 252
            |||||||||||||||| |||||||
Sbjct: 1146 aggcttcccaggaacttgattgct 1169
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>emb|AL606482.14| Mouse DNA sequence from clone RP23-360H16 on chromosome 11 Contains the
             genes for olfactory receptors MOR135-7, -8, -10 and -28,
             three olfactory receptor MOR135 pseudogenes, and the gene
             for olfactory receptor MOR157-1, complete sequence
          Length = 199115

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 333   tatctgcttcctctcaagag 352
             ||||||||||||||||||||
Sbjct: 32301 tatctgcttcctctcaagag 32320
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>dbj|AK098321.1| Homo sapiens cDNA FLJ41002 fis, clone UTERU2016979
          Length = 2341

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 229 aggcttcccaggaactcgattgct 252
           |||||||||||||||| |||||||
Sbjct: 972 aggcttcccaggaacttgattgct 995
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>dbj|AK023148.1| Homo sapiens cDNA FLJ13086 fis, clone NT2RP3002097
          Length = 2415

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 229  aggcttcccaggaactcgattgct 252
            |||||||||||||||| |||||||
Sbjct: 1046 aggcttcccaggaacttgattgct 1069
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 89      gcaccgtcacctgagtgtcg 108
               ||||||||||||||||||||
Sbjct: 5414972 gcaccgtcacctgagtgtcg 5414953
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>dbj|AK007690.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length
           enriched library, clone:1810034E14
           product:unclassifiable, full insert sequence
          Length = 1420

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 339 cttcctctcaagaggcttga 358
           ||||||||||||||||||||
Sbjct: 560 cttcctctcaagaggcttga 579
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>gb|AF280107.1|AF280107 Homo sapiens cytochrome P450 polypeptide 43 (CYP3A43) gene, partial
            cds; cytochrome P450 polypeptide 4 (CYP3A4) and
            cytochrome P450 polypeptide 7 (CYP3A7) genes, complete
            cds; and cytochrome P450 polypeptide 5 (CYP3A5) gene,
            partial cds
          Length = 174832

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 312  ctgtaatttcacaatgctgt 331
            ||||||||||||||||||||
Sbjct: 3374 ctgtaatttcacaatgctgt 3355
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>gb|AC015982.9| Homo sapiens BAC clone RP11-554J4 from 2, complete sequence
          Length = 191546

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 229   aggcttcccaggaactcgattgct 252
             |||||||||||||||| |||||||
Sbjct: 29646 aggcttcccaggaacttgattgct 29623
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>gb|AC147220.3| Mus musculus BAC clone RP23-51A20 from chromosome 18, complete sequence
          Length = 208705

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 222    gtagccaaggcttcccaggaactc 245
              |||||||||||||||| |||||||
Sbjct: 104257 gtagccaaggcttccctggaactc 104234
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>dbj|AK026437.1| Homo sapiens cDNA: FLJ22784 fis, clone KAIA2048
          Length = 3543

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 229  aggcttcccaggaactcgattgct 252
            |||||||||||||||| |||||||
Sbjct: 2155 aggcttcccaggaacttgattgct 2178
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>gb|AC140306.3| Mus musculus BAC clone RP23-386L13 from 8, complete sequence
          Length = 220059

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 410    ttgcagcatccatcactctc 429
              ||||||||||||||||||||
Sbjct: 165363 ttgcagcatccatcactctc 165382
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>emb|AL122106.1|HSM801263 Homo sapiens mRNA; cDNA DKFZp434D1227 (from clone DKFZp434D1227)
          Length = 1788

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 229 aggcttcccaggaactcgattgct 252
           |||||||||||||||| |||||||
Sbjct: 351 aggcttcccaggaacttgattgct 374
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>emb|AL928963.8| Mouse DNA sequence from clone RP23-5K9 on chromosome 2, complete
            sequence
          Length = 216315

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 328  ctgtttatctgcttcctctc 347
            ||||||||||||||||||||
Sbjct: 2074 ctgtttatctgcttcctctc 2055
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>dbj|AB037808.1| Homo sapiens mRNA for KIAA1387 protein, partial cds
          Length = 4385

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 229  aggcttcccaggaactcgattgct 252
            |||||||||||||||| |||||||
Sbjct: 3016 aggcttcccaggaacttgattgct 3039


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,962,458
Number of Sequences: 3902068
Number of extensions: 2962458
Number of successful extensions: 60071
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59911
Number of HSP's gapped (non-prelim): 145
length of query: 496
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 474
effective length of database: 17,147,199,772
effective search space: 8127772691928
effective search space used: 8127772691928
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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