ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags16a12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_188277.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 951 Score = 426 bits (215), Expect = e-116 Identities = 368/419 (87%) Strand = Plus / Minus Query: 241 ctgcctagatcaaagtccatggtgtaatcatactcaatggtgggtatgacagaagccatg 300 ||||| ||||| |||||||| ||||| ||||| ||||| ||||||||||| || ||||| Sbjct: 938 ctgcccagatcgaagtccatagtgtagtcatattcaatagtgggtatgactgaggccata 879 Query: 301 aattttagaaatatgaaaaggtacttgtcaacttctggtgtgcctccttgagacatcata 360 || || | ||||||||||||||||||||||||||||||| ||||||||||||| | | Sbjct: 878 aacttcaaaaatatgaaaaggtacttgtcaacttctggttcaactccttgagacattaga 819 Query: 361 acatcaatgatctttttcatcacagcagcatgcttgcaaggatgcactgaggcgtgctgt 420 |||||||||||||||||||||||||||||||| ||||| ||||||||||| || |||| Sbjct: 818 acatcaatgatctttttcatcacagcagcatgtttgcatggatgcactgaagcatgcttg 759 Query: 421 cctgctaacaagtgtgggtggtcttcgatagtcaccgttttgtgtgcatggtcttgactg 480 |||||| ||||||| || |||||||| ||||||||||| || ||||||| ||||| ||| Sbjct: 758 cctgctgacaagtgaggatggtcttcaatagtcaccgtcttccgtgcatgatcttggctg 699 Query: 481 atatcttgaaacacaaggtcaggctttaatggcattcttgcctcatcatagcctgtaagc 540 ||||||| ||||||||| |||||||||| ||||||||||| ||||||||| || |||||| Sbjct: 698 atatcttcaaacacaagttcaggctttagtggcattcttgactcatcatatccggtaagc 639 Query: 541 cagacacgtggagtttgatagtacttgtcatatgtgatgctgacatcatatgttctagta 600 ||||||||||| ||||| || || ||||||||||||||||| || |||||||| |||||| Sbjct: 638 cagacacgtggggtttggtaatatttgtcatatgtgatgctaacgtcatatgtcctagta 579 Query: 601 agaagaatgttgtcatcatcaggctcttctgcgacaaaatatgaaggctgaggggtagc 659 |||| ||||||||||| ||||||||||||||||||||||||||||| |||| |||||| Sbjct: 578 cgaaggatgttgtcatcttcaggctcttctgcgacaaaatatgaaggttgagcggtagc 520
>dbj|AK067737.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120F11, full insert sequence Length = 1375 Score = 418 bits (211), Expect = e-113 Identities = 367/419 (87%) Strand = Plus / Minus Query: 241 ctgcctagatcaaagtccatggtgtaatcatactcaatggtgggtatgacagaagccatg 300 ||||| ||||| |||||||| ||||| ||||| ||||| ||||||||||| || ||||| Sbjct: 1095 ctgcccagatcgaagtccatagtgtagtcatattcaatagtgggtatgactgaggccata 1036 Query: 301 aattttagaaatatgaaaaggtacttgtcaacttctggtgtgcctccttgagacatcata 360 || || | |||||||||||||| |||||||||||||||| ||||||||||||| | | Sbjct: 1035 aacttcaaaaatatgaaaaggtgcttgtcaacttctggttcaactccttgagacattaga 976 Query: 361 acatcaatgatctttttcatcacagcagcatgcttgcaaggatgcactgaggcgtgctgt 420 |||||||||||||||||||||||||||||||| ||||| ||||||||||| || |||| Sbjct: 975 acatcaatgatctttttcatcacagcagcatgtttgcatggatgcactgaagcatgcttg 916 Query: 421 cctgctaacaagtgtgggtggtcttcgatagtcaccgttttgtgtgcatggtcttgactg 480 |||||| ||||||| || |||||||| ||||||||||| || ||||||| ||||| ||| Sbjct: 915 cctgctgacaagtgaggatggtcttcaatagtcaccgtcttccgtgcatgatcttggctg 856 Query: 481 atatcttgaaacacaaggtcaggctttaatggcattcttgcctcatcatagcctgtaagc 540 ||||||| ||||||||| |||||||||| ||||||||||| ||||||||| || |||||| Sbjct: 855 atatcttcaaacacaagttcaggctttagtggcattcttgactcatcatatccggtaagc 796 Query: 541 cagacacgtggagtttgatagtacttgtcatatgtgatgctgacatcatatgttctagta 600 ||||||||||| ||||| || || ||||||||||||||||| || |||||||| |||||| Sbjct: 795 cagacacgtggggtttggtaatatttgtcatatgtgatgctaacgtcatatgtcctagta 736 Query: 601 agaagaatgttgtcatcatcaggctcttctgcgacaaaatatgaaggctgaggggtagc 659 |||| ||||||||||| ||||||||||||||||||||||||||||| |||| |||||| Sbjct: 735 cgaaggatgttgtcatcttcaggctcttctgcgacaaaatatgaaggttgagcggtagc 677
>gb|AY107670.1| Zea mays PCO096794 mRNA sequence Length = 1350 Score = 276 bits (139), Expect = 9e-71 Identities = 343/411 (83%) Strand = Plus / Minus Query: 234 gcttggactgcctagatcaaagtccatggtgtaatcatactcaatggtgggtatgacaga 293 ||||| |||||| || || | |||||| || ||||| |||||||| || |||||||| | Sbjct: 1080 gcttgtactgccaaggtcgacgtccattgtataatcgtactcaatagtcggtatgactgt 1021 Query: 294 agccatgaattttagaaatatgaaaaggtacttgtcaacttctggtgtgcctccttgaga 353 || |||||||| | ||||||||||||||||||||||||||||||| |||| || Sbjct: 1020 cgctatgaatttcaaaaatatgaaaaggtacttgtcaacttctggttccactccccccga 961 Query: 354 catcataacatcaatgatctttttcatcacagcagcatgcttgcaaggatgcactgaggc 413 ||| ||| || |||||||||||||||||||| ||||| ||||| || |||||||| || Sbjct: 960 cattggaacgtcgatgatctttttcatcacagctgcatgtttgcatgggtgcactgatgc 901 Query: 414 gtgctgtcctgctaacaagtgtgggtggtcttcgatagtcaccgttttgtgtgcatggtc 473 |||| || || || ||||| || ||||| || |||||||||||||| |||| ||||| Sbjct: 900 atgcttcccagccaataagtgaggatggtcctcaatagtcaccgtttttcgtgcgtggtc 841 Query: 474 ttgactgatatcttgaaacacaaggtcaggctttaatggcattcttgcctcatcatagcc 533 ||| ||||| |||| ||||||||| |||||| ||||||||||||||| ||| ||||| || Sbjct: 840 ttggctgatgtcttcaaacacaagttcaggcattaatggcattcttgactcgtcatatcc 781 Query: 534 tgtaagccagacacgtggagtttgatagtacttgtcatatgtgatgctgacatcatatgt 593 || |||||||||||||||||||| |||||||||||||| || ||||| ||||||||||| Sbjct: 780 agttagccagacacgtggagtttggtagtacttgtcatacgttatgctaacatcatatgt 721 Query: 594 tctagtaagaagaatgttgtcatcatcaggctcttctgcgacaaaatatga 644 ||| ||| |||||||||||||||| || || |||||||||| ||| ||||| Sbjct: 720 tctggtatgaagaatgttgtcatcttctggttcttctgcgataaagtatga 670
>ref|NM_197739.1| Oryza sativa (japonica cultivar-group) autophagocytosis protein AUT1-like (OSJNBa0042H09.14), mRNA Length = 726 Score = 230 bits (116), Expect = 5e-57 Identities = 195/220 (88%), Gaps = 1/220 (0%) Strand = Plus / Minus Query: 466 gcatggtcttgactgatatcttgaaacacaaggtcaggctttaatggcattcttgcctca 525 ||||||||||| |||||||||| ||||||||| |||||||||||||||||||||| |||| Sbjct: 712 gcatggtcttg-ctgatatcttcaaacacaagttcaggctttaatggcattcttgactca 654 Query: 526 tcatagcctgtaagccagacacgtggagtttgatagtacttgtcatatgtgatgctgaca 585 ||||| || ||||||||||||||||| ||||| || || || |||||||||||||| || Sbjct: 653 tcatatccggtaagccagacacgtggggtttggtaatatttatcatatgtgatgctaacg 594 Query: 586 tcatatgttctagtaagaagaatgttgtcatcatcaggctcttctgcgacaaaatatgaa 645 |||||||| |||||| |||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 593 tcatatgtcctagtacgaaggatgttgtcatcttcaggctcttctgcgacaaaatatgaa 534 Query: 646 ggctgaggggtagctgttgaatgatctcctgtgtcttcat 685 || |||| |||||| ||||| || ||||||||||||| Sbjct: 533 ggttgagcggtagccactgaatcattccctgtgtcttcat 494
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 141 bits (71), Expect = 3e-30 Identities = 119/135 (88%) Strand = Plus / Plus Query: 322 tacttgtcaacttctggtgtgcctccttgagacatcataacatcaatgatctttttcatc 381 |||||||||||||||||| ||||||||||||| | |||||||||||||||||||||| Sbjct: 5413223 tacttgtcaacttctggttcaactccttgagacattagaacatcaatgatctttttcatc 5413282 Query: 382 acagcagcatgcttgcaaggatgcactgaggcgtgctgtcctgctaacaagtgtgggtgg 441 ||||||||||| ||||| ||||||||||| || |||| |||||| ||||||| || ||| Sbjct: 5413283 acagcagcatgtttgcatggatgcactgaagcatgcttgcctgctgacaagtgaggatgg 5413342 Query: 442 tcttcgatagtcacc 456 ||||| ||||||||| Sbjct: 5413343 tcttcaatagtcacc 5413357 Score = 107 bits (54), Expect = 5e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 574 gtgatgctgacatcatatgttctagtaagaagaatgttgtcatcatcaggctcttctgcg 633 |||||||| || |||||||| |||||| |||| ||||||||||| ||||||||||||||| Sbjct: 5414496 gtgatgctaacgtcatatgtcctagtacgaaggatgttgtcatcttcaggctcttctgcg 5414555 Query: 634 acaaaatatgaaggctgaggggtagc 659 |||||||||||||| |||| |||||| Sbjct: 5414556 acaaaatatgaaggttgagcggtagc 5414581 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 464 gtgcatggtcttgactgatatcttgaaacacaaggtcaggctttaatggcattcttg 520 ||||||| ||||| |||||||||| ||||||||| |||||||||| ||||||||||| Sbjct: 5413848 gtgcatgatcttggctgatatcttcaaacacaagttcaggctttagtggcattcttg 5413904 Score = 73.8 bits (37), Expect = 7e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 241 ctgcctagatcaaagtccatggtgtaatcatactcaatggtgggtatgacagaagccatg 300 ||||| ||||| |||||||| ||||| ||||| ||||| ||||||||||| || ||||| Sbjct: 5413039 ctgcccagatcgaagtccatagtgtagtcatattcaatagtgggtatgactgaggccata 5413098 Query: 301 aattttagaaatatgaaaaggtacttgtc 329 || || | |||||||||||||||| |||| Sbjct: 5413099 aacttcaaaaatatgaaaaggtacctgtc 5413127 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 521 cctcatcatagcctgtaagccagacacgtggagtttgatagtacttgtcatat 573 |||||||||| || ||||||||||||||||| ||||| || || ||||||||| Sbjct: 5413985 cctcatcatatccggtaagccagacacgtggggtttggtaatatttgtcatat 5414037
>dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1015E06 Length = 164583 Score = 141 bits (71), Expect = 3e-30 Identities = 119/135 (88%) Strand = Plus / Plus Query: 322 tacttgtcaacttctggtgtgcctccttgagacatcataacatcaatgatctttttcatc 381 |||||||||||||||||| ||||||||||||| | |||||||||||||||||||||| Sbjct: 10063 tacttgtcaacttctggttcaactccttgagacattagaacatcaatgatctttttcatc 10122 Query: 382 acagcagcatgcttgcaaggatgcactgaggcgtgctgtcctgctaacaagtgtgggtgg 441 ||||||||||| ||||| ||||||||||| || |||| |||||| ||||||| || ||| Sbjct: 10123 acagcagcatgtttgcatggatgcactgaagcatgcttgcctgctgacaagtgaggatgg 10182 Query: 442 tcttcgatagtcacc 456 ||||| ||||||||| Sbjct: 10183 tcttcaatagtcacc 10197 Score = 107 bits (54), Expect = 5e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 574 gtgatgctgacatcatatgttctagtaagaagaatgttgtcatcatcaggctcttctgcg 633 |||||||| || |||||||| |||||| |||| ||||||||||| ||||||||||||||| Sbjct: 11336 gtgatgctaacgtcatatgtcctagtacgaaggatgttgtcatcttcaggctcttctgcg 11395 Query: 634 acaaaatatgaaggctgaggggtagc 659 |||||||||||||| |||| |||||| Sbjct: 11396 acaaaatatgaaggttgagcggtagc 11421 Score = 73.8 bits (37), Expect = 7e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 464 gtgcatggtcttgactgatatcttgaaacacaaggtcaggctttaatggcattcttg 520 ||||||| ||||| |||||||||| ||||||||| |||||||||| ||||||||||| Sbjct: 10688 gtgcatgatcttggctgatatcttcaaacacaagttcaggctttagtggcattcttg 10744 Score = 73.8 bits (37), Expect = 7e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 241 ctgcctagatcaaagtccatggtgtaatcatactcaatggtgggtatgacagaagccatg 300 ||||| ||||| |||||||| ||||| ||||| ||||| ||||||||||| || ||||| Sbjct: 9879 ctgcccagatcgaagtccatagtgtagtcatattcaatagtgggtatgactgaggccata 9938 Query: 301 aattttagaaatatgaaaaggtacttgtc 329 || || | |||||||||||||||| |||| Sbjct: 9939 aacttcaaaaatatgaaaaggtacctgtc 9967 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 521 cctcatcatagcctgtaagccagacacgtggagtttgatagtacttgtcatat 573 |||||||||| || ||||||||||||||||| ||||| || || ||||||||| Sbjct: 10825 cctcatcatatccggtaagccagacacgtggggtttggtaatatttgtcatat 10877
>gb|AY701318.1| Nicotiana benthamiana autophagy protein ATG3 mRNA, partial cds Length = 493 Score = 133 bits (67), Expect = 8e-28 Identities = 187/227 (82%) Strand = Plus / Minus Query: 433 tgtgggtggtcttcgatagtcaccgttttgtgtgcatggtcttgactgatatcttgaaac 492 ||||| || ||||| || |||||||||||| |||||||||||||||||| ||| | || Sbjct: 293 tgtggatgatcttcaatggtcaccgttttgcgtgcatggtcttgactgacatcctcaagt 234 Query: 493 acaaggtcaggctttaatggcattcttgcctcatcatagcctgtaagccagacacgtgga 552 ||||| || || | ||| |||| |||| ||||||||| || || ||||| ||||| || Sbjct: 233 acaagctctggttgtaaaagcatccttgactcatcatatccagtgagccatacacgaggc 174 Query: 553 gtttgatagtacttgtcatatgtgatgctgacatcatatgttctagtaagaagaatgttg 612 |||||||||||||||||||| |||||||||| ||||||||||| || ||||||||| Sbjct: 173 gtttgatagtacttgtcatacgtgatgctgatatcatatgttcgtgttcttagaatgttg 114 Query: 613 tcatcatcaggctcttctgcgacaaaatatgaaggctgaggggtagc 659 |||||||||||||| | || |||| ||||| || |||| ||||||| Sbjct: 113 tcatcatcaggctcatgagccacaagatatgtagtctgaagggtagc 67 Score = 48.1 bits (24), Expect = 0.038 Identities = 72/88 (81%) Strand = Plus / Minus Query: 248 gatcaaagtccatggtgtaatcatactcaatggtgggtatgacagaagccatgaatttta 307 ||||||||||||||||||| || || ||||| || || || || |||||||| || || | Sbjct: 475 gatcaaagtccatggtgtagtcgtattcaattgttggaataacggaagccataaacttca 416 Query: 308 gaaatatgaaaaggtacttgtcaacttc 335 |||| ||| | ||||||||||||||| Sbjct: 415 agaataggaagaagtacttgtcaacttc 388
>gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 genomic sequence, complete sequence Length = 144191 Score = 125 bits (63), Expect = 2e-25 Identities = 117/135 (86%) Strand = Plus / Minus Query: 322 tacttgtcaacttctggtgtgcctccttgagacatcataacatcaatgatctttttcatc 381 |||||||||||||||||| ||||| ||||||| | |||||||||||||||||||||| Sbjct: 48999 tacttgtcaacttctggttcaactcctcgagacattagaacatcaatgatctttttcatc 48940 Query: 382 acagcagcatgcttgcaaggatgcactgaggcgtgctgtcctgctaacaagtgtgggtgg 441 |||||||| || ||||| ||||||||||| || |||| |||||| ||||||| || ||| Sbjct: 48939 acagcagcgtgtttgcatggatgcactgaagcatgcttgcctgctgacaagtgaggatgg 48880 Query: 442 tcttcgatagtcacc 456 ||||| ||||||||| Sbjct: 48879 tcttcaatagtcacc 48865 Score = 107 bits (54), Expect = 5e-20 Identities = 78/86 (90%) Strand = Plus / Minus Query: 574 gtgatgctgacatcatatgttctagtaagaagaatgttgtcatcatcaggctcttctgcg 633 |||||||| || |||||||| |||||| |||| ||||||||||| ||||||||||||||| Sbjct: 47786 gtgatgctaacgtcatatgtcctagtacgaaggatgttgtcatcttcaggctcttctgcg 47727 Query: 634 acaaaatatgaaggctgaggggtagc 659 |||||||||||||| |||| |||||| Sbjct: 47726 acaaaatatgaaggttgagcggtagc 47701 Score = 77.8 bits (39), Expect = 4e-11 Identities = 52/55 (94%), Gaps = 1/55 (1%) Strand = Plus / Minus Query: 466 gcatggtcttgactgatatcttgaaacacaaggtcaggctttaatggcattcttg 520 ||||||||||| |||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 48351 gcatggtcttg-ctgatatcttcaaacacaagttcaggctttaatggcattcttg 48298 Score = 65.9 bits (33), Expect = 2e-07 Identities = 81/97 (83%) Strand = Plus / Minus Query: 233 tgcttggactgcctagatcaaagtccatggtgtaatcatactcaatggtgggtatgacag 292 |||||| |||||| ||||| |||||||| ||||| ||||| ||||| ||||||||||| | Sbjct: 49191 tgcttgtactgcccagatcgaagtccatagtgtagtcatattcaatagtgggtatgactg 49132 Query: 293 aagccatgaattttagaaatatgaaaaggtacttgtc 329 ||||| || || | |||||||||||| ||| |||| Sbjct: 49131 gggccataaacttcaaaaatatgaaaagttacctgtc 49095 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Minus Query: 521 cctcatcatagcctgtaagccagacacgtggagtttg 557 |||||||||| || ||||||||||||||||| ||||| Sbjct: 48217 cctcatcatatccggtaagccagacacgtggggtttg 48181
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 125 bits (63), Expect = 2e-25 Identities = 117/135 (86%) Strand = Plus / Plus Query: 322 tacttgtcaacttctggtgtgcctccttgagacatcataacatcaatgatctttttcatc 381 |||||||||||||||||| ||||| ||||||| | |||||||||||||||||||||| Sbjct: 21561058 tacttgtcaacttctggttcaactcctcgagacattagaacatcaatgatctttttcatc 21561117 Query: 382 acagcagcatgcttgcaaggatgcactgaggcgtgctgtcctgctaacaagtgtgggtgg 441 |||||||| || ||||| ||||||||||| || |||| |||||| ||||||| || ||| Sbjct: 21561118 acagcagcgtgtttgcatggatgcactgaagcatgcttgcctgctgacaagtgaggatgg 21561177 Query: 442 tcttcgatagtcacc 456 ||||| ||||||||| Sbjct: 21561178 tcttcaatagtcacc 21561192 Score = 107 bits (54), Expect = 5e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 574 gtgatgctgacatcatatgttctagtaagaagaatgttgtcatcatcaggctcttctgcg 633 |||||||| || |||||||| |||||| |||| ||||||||||| ||||||||||||||| Sbjct: 21562271 gtgatgctaacgtcatatgtcctagtacgaaggatgttgtcatcttcaggctcttctgcg 21562330 Query: 634 acaaaatatgaaggctgaggggtagc 659 |||||||||||||| |||| |||||| Sbjct: 21562331 acaaaatatgaaggttgagcggtagc 21562356 Score = 77.8 bits (39), Expect = 4e-11 Identities = 52/55 (94%), Gaps = 1/55 (1%) Strand = Plus / Plus Query: 466 gcatggtcttgactgatatcttgaaacacaaggtcaggctttaatggcattcttg 520 ||||||||||| |||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 21561706 gcatggtcttg-ctgatatcttcaaacacaagttcaggctttaatggcattcttg 21561759 Score = 65.9 bits (33), Expect = 2e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 233 tgcttggactgcctagatcaaagtccatggtgtaatcatactcaatggtgggtatgacag 292 |||||| |||||| ||||| |||||||| ||||| ||||| ||||| ||||||||||| | Sbjct: 21560866 tgcttgtactgcccagatcgaagtccatagtgtagtcatattcaatagtgggtatgactg 21560925 Query: 293 aagccatgaattttagaaatatgaaaaggtacttgtc 329 ||||| || || | |||||||||||| ||| |||| Sbjct: 21560926 gggccataaacttcaaaaatatgaaaagttacctgtc 21560962 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Plus Query: 521 cctcatcatagcctgtaagccagacacgtggagtttg 557 |||||||||| || ||||||||||||||||| ||||| Sbjct: 21561840 cctcatcatatccggtaagccagacacgtggggtttg 21561876
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 125 bits (63), Expect = 2e-25 Identities = 117/135 (86%) Strand = Plus / Plus Query: 322 tacttgtcaacttctggtgtgcctccttgagacatcataacatcaatgatctttttcatc 381 |||||||||||||||||| ||||| ||||||| | |||||||||||||||||||||| Sbjct: 21572721 tacttgtcaacttctggttcaactcctcgagacattagaacatcaatgatctttttcatc 21572780 Query: 382 acagcagcatgcttgcaaggatgcactgaggcgtgctgtcctgctaacaagtgtgggtgg 441 |||||||| || ||||| ||||||||||| || |||| |||||| ||||||| || ||| Sbjct: 21572781 acagcagcgtgtttgcatggatgcactgaagcatgcttgcctgctgacaagtgaggatgg 21572840 Query: 442 tcttcgatagtcacc 456 ||||| ||||||||| Sbjct: 21572841 tcttcaatagtcacc 21572855 Score = 107 bits (54), Expect = 5e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 574 gtgatgctgacatcatatgttctagtaagaagaatgttgtcatcatcaggctcttctgcg 633 |||||||| || |||||||| |||||| |||| ||||||||||| ||||||||||||||| Sbjct: 21573934 gtgatgctaacgtcatatgtcctagtacgaaggatgttgtcatcttcaggctcttctgcg 21573993 Query: 634 acaaaatatgaaggctgaggggtagc 659 |||||||||||||| |||| |||||| Sbjct: 21573994 acaaaatatgaaggttgagcggtagc 21574019 Score = 77.8 bits (39), Expect = 4e-11 Identities = 52/55 (94%), Gaps = 1/55 (1%) Strand = Plus / Plus Query: 466 gcatggtcttgactgatatcttgaaacacaaggtcaggctttaatggcattcttg 520 ||||||||||| |||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 21573369 gcatggtcttg-ctgatatcttcaaacacaagttcaggctttaatggcattcttg 21573422 Score = 65.9 bits (33), Expect = 2e-07 Identities = 81/97 (83%) Strand = Plus / Plus Query: 233 tgcttggactgcctagatcaaagtccatggtgtaatcatactcaatggtgggtatgacag 292 |||||| |||||| ||||| |||||||| ||||| ||||| ||||| ||||||||||| | Sbjct: 21572529 tgcttgtactgcccagatcgaagtccatagtgtagtcatattcaatagtgggtatgactg 21572588 Query: 293 aagccatgaattttagaaatatgaaaaggtacttgtc 329 ||||| || || | |||||||||||| ||| |||| Sbjct: 21572589 gggccataaacttcaaaaatatgaaaagttacctgtc 21572625 Score = 50.1 bits (25), Expect = 0.010 Identities = 34/37 (91%) Strand = Plus / Plus Query: 521 cctcatcatagcctgtaagccagacacgtggagtttg 557 |||||||||| || ||||||||||||||||| ||||| Sbjct: 21573503 cctcatcatatccggtaagccagacacgtggggtttg 21573539
>gb|AY350711.1| Sisymbrium irio clone BAC Sio11E11, complete sequence Length = 95357 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 521 cctcatcatagcctgtaagccagacacgtggagtttgatagtacttgtcata 572 ||||||||||||| || | ||| ||||| ||||||||||| ||||||||||| Sbjct: 41956 cctcatcatagccggtcaaccaaacacggggagtttgataatacttgtcata 41905 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 247 agatcaaagtccatggtgtaatcata 272 |||||||||||||| ||||||||||| Sbjct: 42536 agatcaaagtccattgtgtaatcata 42511 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 454 accgttttgtgtgcatggtcttgactga 481 |||||||| |||||||||||||||||| Sbjct: 42134 accgttttacgtgcatggtcttgactga 42107
>ref|NM_125543.2| Arabidopsis thaliana unknown protein AT5G61500 mRNA, complete cds Length = 1288 Score = 54.0 bits (27), Expect = 6e-04 Identities = 153/195 (78%) Strand = Plus / Minus Query: 429 caagtgtgggtggtcttcgatagtcaccgttttgtgtgcatggtcttgactgatatcttg 488 ||||||||| || |||||||| || |||||||| | ||||||||||| || | ||| | Sbjct: 881 caagtgtggatgatcttcgattgtgaccgttttacgagcatggtcttggctaacatcctc 822 Query: 489 aaacacaaggtcaggctttaatggcattcttgcctcatcatagcctgtaagccagacacg 548 | ||||| ||||| | | |||| |||| ||||||||| || || ||||| ||||| Sbjct: 821 cattacaagttcaggttgcagcagcatccttgactcatcataaccggtcagccaaacacg 762 Query: 549 tggagtttgatagtacttgtcatatgtgatgctgacatcatatgttctagtaagaagaat 608 |||||||| || ||||| ||||| || ||||||| ||||||||| | ||| | ||||| Sbjct: 761 aggagtttggtaatacttatcatacgttatgctgagatcatatgtccgagttcggagaat 702 Query: 609 gttgtcatcatcagg 623 ||| || |||||||| Sbjct: 701 gttatcgtcatcagg 687 Score = 50.1 bits (25), Expect = 0.010 Identities = 73/89 (82%) Strand = Plus / Minus Query: 247 agatcaaagtccatggtgtaatcatactcaatggtgggtatgacagaagccatgaatttt 306 |||||||||||||| |||||||| |||||||| || || || || || |||||||| || Sbjct: 1060 agatcaaagtccattgtgtaatcgtactcaattgttggaataactgatgccatgaacttc 1001 Query: 307 agaaatatgaaaaggtacttgtcaacttc 335 | || | ||| ||||||||||| ||||| Sbjct: 1000 aagaacaggaagaggtacttgtcgacttc 972
>gb|BT011893.1| Arabidopsis thaliana At5g61500 mRNA sequence Length = 939 Score = 54.0 bits (27), Expect = 6e-04 Identities = 153/195 (78%) Strand = Plus / Minus Query: 429 caagtgtgggtggtcttcgatagtcaccgttttgtgtgcatggtcttgactgatatcttg 488 ||||||||| || |||||||| || |||||||| | ||||||||||| || | ||| | Sbjct: 741 caagtgtggatgatcttcgattgtgaccgttttacgagcatggtcttggctaacatcctc 682 Query: 489 aaacacaaggtcaggctttaatggcattcttgcctcatcatagcctgtaagccagacacg 548 | ||||| ||||| | | |||| |||| ||||||||| || || ||||| ||||| Sbjct: 681 cattacaagttcaggttgcagcagcatccttgactcatcataaccggtcagccaaacacg 622 Query: 549 tggagtttgatagtacttgtcatatgtgatgctgacatcatatgttctagtaagaagaat 608 |||||||| || ||||| ||||| || ||||||| ||||||||| | ||| | ||||| Sbjct: 621 aggagtttggtaatacttatcatacgttatgctgagatcatatgtccgagttcggagaat 562 Query: 609 gttgtcatcatcagg 623 ||| || |||||||| Sbjct: 561 gttatcgtcatcagg 547 Score = 50.1 bits (25), Expect = 0.010 Identities = 73/89 (82%) Strand = Plus / Minus Query: 247 agatcaaagtccatggtgtaatcatactcaatggtgggtatgacagaagccatgaatttt 306 |||||||||||||| |||||||| |||||||| || || || || || |||||||| || Sbjct: 920 agatcaaagtccattgtgtaatcgtactcaattgttggaataactgatgccatgaacttc 861 Query: 307 agaaatatgaaaaggtacttgtcaacttc 335 | || | ||| ||||||||||| ||||| Sbjct: 860 aagaacaggaagaggtacttgtcgacttc 832
>emb|BX829994.1|CNS0A1FB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB52ZB02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1286 Score = 54.0 bits (27), Expect = 6e-04 Identities = 153/195 (78%) Strand = Plus / Minus Query: 429 caagtgtgggtggtcttcgatagtcaccgttttgtgtgcatggtcttgactgatatcttg 488 ||||||||| || |||||||| || |||||||| | ||||||||||| || | ||| | Sbjct: 862 caagtgtggatgatcttcgattgtgaccgttttacgagcatggtcttggctaacatcctc 803 Query: 489 aaacacaaggtcaggctttaatggcattcttgcctcatcatagcctgtaagccagacacg 548 | ||||| ||||| | | |||| |||| ||||||||| || || ||||| ||||| Sbjct: 802 cattacaagttcaggttgcagcagcatccttgactcatcataaccggtcagccaaacacg 743 Query: 549 tggagtttgatagtacttgtcatatgtgatgctgacatcatatgttctagtaagaagaat 608 |||||||| || ||||| ||||| || ||||||| ||||||||| | ||| | ||||| Sbjct: 742 aggagtttggtaatacttatcatacgttatgctgagatcatatgtccgagttcggagaat 683 Query: 609 gttgtcatcatcagg 623 ||| || |||||||| Sbjct: 682 gttatcgtcatcagg 668 Score = 50.1 bits (25), Expect = 0.010 Identities = 73/89 (82%) Strand = Plus / Minus Query: 247 agatcaaagtccatggtgtaatcatactcaatggtgggtatgacagaagccatgaatttt 306 |||||||||||||| |||||||| |||||||| || || || || || |||||||| || Sbjct: 1041 agatcaaagtccattgtgtaatcgtactcaattgttggaataactgatgccatgaacttc 982 Query: 307 agaaatatgaaaaggtacttgtcaacttc 335 | || | ||| ||||||||||| ||||| Sbjct: 981 aagaacaggaagaggtacttgtcgacttc 953
>gb|AY088587.1| Arabidopsis thaliana clone 8184 mRNA, complete sequence Length = 1349 Score = 54.0 bits (27), Expect = 6e-04 Identities = 153/195 (78%) Strand = Plus / Minus Query: 429 caagtgtgggtggtcttcgatagtcaccgttttgtgtgcatggtcttgactgatatcttg 488 ||||||||| || |||||||| || |||||||| | ||||||||||| || | ||| | Sbjct: 887 caagtgtggatgatcttcgattgtgaccgttttacgagcatggtcttggctaacatcctc 828 Query: 489 aaacacaaggtcaggctttaatggcattcttgcctcatcatagcctgtaagccagacacg 548 | ||||| ||||| | | |||| |||| ||||||||| || || ||||| ||||| Sbjct: 827 cattacaagttcaggttgcagcagcatccttgactcatcataaccggtcagccaaacacg 768 Query: 549 tggagtttgatagtacttgtcatatgtgatgctgacatcatatgttctagtaagaagaat 608 |||||||| || ||||| ||||| || ||||||| ||||||||| | ||| | ||||| Sbjct: 767 aggagtttggtaatacttatcatacgttatgctgagatcatatgtccgagttcggagaat 708 Query: 609 gttgtcatcatcagg 623 ||| || |||||||| Sbjct: 707 gttatcgtcatcagg 693 Score = 50.1 bits (25), Expect = 0.010 Identities = 73/89 (82%) Strand = Plus / Minus Query: 247 agatcaaagtccatggtgtaatcatactcaatggtgggtatgacagaagccatgaatttt 306 |||||||||||||| |||||||| |||||||| || || || || || |||||||| || Sbjct: 1066 agatcaaagtccattgtgtaatcgtactcaattgttggaataactgatgccatgaacttc 1007 Query: 307 agaaatatgaaaaggtacttgtcaacttc 335 | || | ||| ||||||||||| ||||| Sbjct: 1006 aagaacaggaagaggtacttgtcgacttc 978
>dbj|AB073170.1| Arabidopsis thaliana AtAPG3 mRNA for autophagy 3, complete cds Length = 1315 Score = 54.0 bits (27), Expect = 6e-04 Identities = 153/195 (78%) Strand = Plus / Minus Query: 429 caagtgtgggtggtcttcgatagtcaccgttttgtgtgcatggtcttgactgatatcttg 488 ||||||||| || |||||||| || |||||||| | ||||||||||| || | ||| | Sbjct: 833 caagtgtggatgatcttcgattgtgaccgttttacgagcatggtcttggctaacatcctc 774 Query: 489 aaacacaaggtcaggctttaatggcattcttgcctcatcatagcctgtaagccagacacg 548 | ||||| ||||| | | |||| |||| ||||||||| || || ||||| ||||| Sbjct: 773 cattacaagttcaggttgcagcagcatccttgactcatcataaccggtcagccaaacacg 714 Query: 549 tggagtttgatagtacttgtcatatgtgatgctgacatcatatgttctagtaagaagaat 608 |||||||| || ||||| ||||| || ||||||| ||||||||| | ||| | ||||| Sbjct: 713 aggagtttggtaatacttatcatacgttatgctgagatcatatgtccgagttcggagaat 654 Query: 609 gttgtcatcatcagg 623 ||| || |||||||| Sbjct: 653 gttatcgtcatcagg 639 Score = 50.1 bits (25), Expect = 0.010 Identities = 73/89 (82%) Strand = Plus / Minus Query: 247 agatcaaagtccatggtgtaatcatactcaatggtgggtatgacagaagccatgaatttt 306 |||||||||||||| |||||||| |||||||| || || || || || |||||||| || Sbjct: 1012 agatcaaagtccattgtgtaatcgtactcaattgttggaataactgatgccatgaacttc 953 Query: 307 agaaatatgaaaaggtacttgtcaacttc 335 | || | ||| ||||||||||| ||||| Sbjct: 952 aagaacaggaagaggtacttgtcgacttc 924
>ref|XM_793962.1| PREDICTED: Strongylocentrotus purpuratus similar to autophagy Apg3p/Aut1p-like (LOC594526), mRNA Length = 792 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 556 tgatagtacttgtcatatgtgatgctgacatcatatgttct 596 |||||||||||||||||||||||| | | |||||| ||||| Sbjct: 464 tgatagtacttgtcatatgtgatgttaagatcatacgttct 424
>gb|BT024713.1| Arabidopsis thaliana At5g61500 mRNA, complete cds Length = 942 Score = 50.1 bits (25), Expect = 0.010 Identities = 73/89 (82%) Strand = Plus / Minus Query: 247 agatcaaagtccatggtgtaatcatactcaatggtgggtatgacagaagccatgaatttt 306 |||||||||||||| |||||||| |||||||| || || || || || |||||||| || Sbjct: 923 agatcaaagtccattgtgtaatcgtactcaattgttggaataactgatgccatgaacttc 864 Query: 307 agaaatatgaaaaggtacttgtcaacttc 335 | || | ||| ||||||||||| ||||| Sbjct: 863 aagaacaggaagaggtacttgtcgacttc 835 Score = 46.1 bits (23), Expect = 0.15 Identities = 152/195 (77%) Strand = Plus / Minus Query: 429 caagtgtgggtggtcttcgatagtcaccgttttgtgtgcatggtcttgactgatatcttg 488 ||||||||| || |||||||| || |||||||| | ||||||||||| || | ||| | Sbjct: 744 caagtgtggatgatcttcgattgtgaccgttttacgagcatggtcttggctaacatcctc 685 Query: 489 aaacacaaggtcaggctttaatggcattcttgcctcatcatagcctgtaagccagacacg 548 | ||||| ||||| | | |||| |||| ||||||||| || || ||||| ||||| Sbjct: 684 cattacaagttcaggttgcagcagcatccttgactcatcataaccggtcagccaaacacg 625 Query: 549 tggagtttgatagtacttgtcatatgtgatgctgacatcatatgttctagtaagaagaat 608 |||||||| || ||||| ||||| || ||||||| |||||| || | ||| | ||||| Sbjct: 624 aggagtttggtaatacttatcatacgttatgctgagatcatacgtccgagttcggagaat 565 Query: 609 gttgtcatcatcagg 623 ||| || |||||||| Sbjct: 564 gttatcgtcatcagg 550
>dbj|AK222077.1| Arabidopsis thaliana mRNA for autophagocytosis protein - like, complete cds, clone: RAFL22-82-C24 Length = 424 Score = 50.1 bits (25), Expect = 0.010 Identities = 73/89 (82%) Strand = Plus / Minus Query: 247 agatcaaagtccatggtgtaatcatactcaatggtgggtatgacagaagccatgaatttt 306 |||||||||||||| |||||||| |||||||| || || || || || |||||||| || Sbjct: 131 agatcaaagtccattgtgtaatcgtactcaattgttggaataactgatgccatgaacttc 72 Query: 307 agaaatatgaaaaggtacttgtcaacttc 335 | || | ||| ||||||||||| ||||| Sbjct: 71 aagaacaggaagaggtacttgtcgacttc 43
>dbj|AB012239.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K11J9 Length = 69142 Score = 48.1 bits (24), Expect = 0.038 Identities = 30/32 (93%) Strand = Plus / Plus Query: 247 agatcaaagtccatggtgtaatcatactcaat 278 |||||||||||||| |||||||| |||||||| Sbjct: 8810 agatcaaagtccattgtgtaatcgtactcaat 8841
>emb|AL928990.4| Zebrafish DNA sequence from clone CH211-11F8, complete sequence Length = 185618 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 117 gaaccaacacacacagacacaat 139 ||||||||||||||||||||||| Sbjct: 168478 gaaccaacacacacagacacaat 168500
>gb|BC088024.1| Xenopus tropicalis autophagy-related 3-like (yeast), mRNA (cDNA clone MGC:107968 IMAGE:7025477), complete cds Length = 1152 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 553 gtttgatagtacttgtcatatgtgat 578 |||||||| ||||||||||||||||| Sbjct: 671 gtttgataatacttgtcatatgtgat 646
>ref|XM_751223.1| Ustilago maydis 521 hypothetical protein (UM00169.1) partial mRNA Length = 1320 Score = 44.1 bits (22), Expect = 0.60 Identities = 28/30 (93%) Strand = Plus / Minus Query: 550 ggagtttgatagtacttgtcatatgtgatg 579 |||||||||||||||||||| || |||||| Sbjct: 770 ggagtttgatagtacttgtcgtacgtgatg 741
>ref|XM_782055.1| PREDICTED: Strongylocentrotus purpuratus similar to APG3 autophagy 3-like (LOC582084), mRNA Length = 468 Score = 44.1 bits (22), Expect = 0.60 Identities = 34/38 (89%) Strand = Plus / Minus Query: 559 tagtacttgtcatatgtgatgctgacatcatatgttct 596 ||||||||||||||||||||| | | |||||| ||||| Sbjct: 137 tagtacttgtcatatgtgatgttaagatcatacgttct 100
>ref|NM_001011420.1| Xenopus tropicalis autophagy-related 3-like (yeast) (atg3l), mRNA Length = 1152 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 553 gtttgatagtacttgtcatatgtgat 578 |||||||| ||||||||||||||||| Sbjct: 671 gtttgataatacttgtcatatgtgat 646
>gb|AC007656.2| Homo sapiens 12q22 BAC RPCI11-534P6 (Rowswell Park Cancer Institute Human BAC Library) complete sequence Length = 171236 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 487 tgaaacacaaggtcaggcttta 508 |||||||||||||||||||||| Sbjct: 11703 tgaaacacaaggtcaggcttta 11682
>gb|AC013417.4|AC013417 Homo sapiens 12q22-103.4-106.5 BAC RP11-397H6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 114049 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 487 tgaaacacaaggtcaggcttta 508 |||||||||||||||||||||| Sbjct: 66395 tgaaacacaaggtcaggcttta 66374
>emb|CR761175.2| Xenopus tropicalis finished cDNA, clone TEgg015l06 Length = 1179 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 553 gtttgatagtacttgtcatatgtgat 578 |||||||| ||||||||||||||||| Sbjct: 684 gtttgataatacttgtcatatgtgat 659
>gb|AC154808.2| Mus musculus BAC clone RP24-512K19 from chromosome 13, complete sequence Length = 187080 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 277 atggtgggtatgacagaagcc 297 ||||||||||||||||||||| Sbjct: 18467 atggtgggtatgacagaagcc 18487
>ref|XM_382159.1| Gibberella zeae PH-1 chromosome 1 predicted protein (FG01983.1) partial mRNA Length = 1344 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 317 aaaggtacttgtcaacttctg 337 ||||||||||||||||||||| Sbjct: 31 aaaggtacttgtcaacttctg 11
>gb|AC069208.24| Homo sapiens 12 BAC RP11-778H2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167182 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 123 acacacacagacacaatgtacagat 147 ||||||||| ||||||||||||||| Sbjct: 109923 acacacacacacacaatgtacagat 109899
>emb|BX511086.5| Zebrafish DNA sequence from clone DKEY-38P8 in linkage group 7, complete sequence Length = 228170 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 aaccaacacacacagacacaa 138 ||||||||||||||||||||| Sbjct: 47165 aaccaacacacacagacacaa 47185
>gb|AC073571.14| Homo sapiens 12 BAC RP11-136F16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 144231 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 atgaattttagaaatatgaaa 318 ||||||||||||||||||||| Sbjct: 67284 atgaattttagaaatatgaaa 67264
>gb|AC140776.6| Mus musculus chromosome 1, clone RP23-284K5, complete sequence Length = 223196 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 agacatcataacatcaatgat 371 ||||||||||||||||||||| Sbjct: 54284 agacatcataacatcaatgat 54264
>gb|AC096570.1| Homo sapiens BAC clone RP11-368O18 from 2, complete sequence Length = 207972 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 atgaattttagaaatatgaaa 318 ||||||||||||||||||||| Sbjct: 149848 atgaattttagaaatatgaaa 149828
>gb|AC107419.3| Homo sapiens X BAC RP11-241K4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 151900 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 272 actcaatggtgggtatgacag 292 ||||||||||||||||||||| Sbjct: 40536 actcaatggtgggtatgacag 40516
>gb|AC154502.2| Mus musculus BAC clone RP24-87I20 from chromosome 13, complete sequence Length = 183319 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 277 atggtgggtatgacagaagcc 297 ||||||||||||||||||||| Sbjct: 38663 atggtgggtatgacagaagcc 38643
>gb|DQ316795.1| Diphyllobothrium latum clone 4 18S ribosomal RNA gene, complete sequence Length = 2113 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 119 accaacacacacagacacaat 139 ||||||||||||||||||||| Sbjct: 732 accaacacacacagacacaat 712
>emb|BX897747.8| Zebrafish DNA sequence from clone DKEY-187J14 in linkage group 14, complete sequence Length = 217125 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 300 gaattttagaaatatgaaaag 320 ||||||||||||||||||||| Sbjct: 10877 gaattttagaaatatgaaaag 10897
>gb|L14303.1|HUMTRPTB Homo sapiens DNA sequence, tandem repeat region Length = 515 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 atgaattttagaaatatgaaa 318 ||||||||||||||||||||| Sbjct: 136 atgaattttagaaatatgaaa 116
>gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold Length = 1952403 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 tcataacatcaatgatcttt 375 |||||||||||||||||||| Sbjct: 1937385 tcataacatcaatgatcttt 1937366
>gb|AC148027.3| Homo sapiens BAC clone RP11-184H2 from UL, complete sequence Length = 148764 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 448 atagtcaccgttttgtgtgcatgg 471 ||||||||| |||||||||||||| Sbjct: 147900 atagtcacctttttgtgtgcatgg 147877
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 tcggcgacaatgaccagcttgcct 193 |||||||||| ||||||||||||| Sbjct: 1343225 tcggcgacaaggaccagcttgcct 1343248
>gb|AC182469.3| Pan troglodytes BAC clone CH251-496G17 from chromosome 4, complete sequence Length = 191618 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 448 atagtcaccgttttgtgtgcatgg 471 ||||||||| |||||||||||||| Sbjct: 87138 atagtcacctttttgtgtgcatgg 87161
>gb|AC159167.4| Callicebus moloch clone LB5-397N12, complete sequence Length = 70993 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 tcataacatcaatgatcttt 375 |||||||||||||||||||| Sbjct: 63330 tcataacatcaatgatcttt 63311
>gb|AC183989.2| Pan troglodytes BAC clone CH251-207E6 from chromosome 2, complete sequence Length = 163596 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 602 gaagaatgttgtcatcatca 621 |||||||||||||||||||| Sbjct: 49436 gaagaatgttgtcatcatca 49417
>gb|AC006387.3| Homo sapiens BAC clone CTA-360L10 from 7, complete sequence Length = 138764 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 aattttagaaatatgaaaag 320 |||||||||||||||||||| Sbjct: 137431 aattttagaaatatgaaaag 137412
>gb|AC113198.15| Mus musculus chromosome 14, clone RP23-248E15, complete sequence Length = 236220 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 ctgcagagcatcagagttta 93 |||||||||||||||||||| Sbjct: 106392 ctgcagagcatcagagttta 106411
>emb|CT025709.6| Mouse DNA sequence from clone RP23-364G1 on chromosome 17, complete sequence Length = 162359 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gaattttagaaatatgaaaa 319 |||||||||||||||||||| Sbjct: 144347 gaattttagaaatatgaaaa 144366
>emb|BX324199.7| Zebrafish DNA sequence from clone DKEYP-7D4 in linkage group 17, complete sequence Length = 69782 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gaattttagaaatatgaaaa 319 |||||||||||||||||||| Sbjct: 52817 gaattttagaaatatgaaaa 52836
>emb|BX530066.21| Zebrafish DNA sequence from clone DKEY-48C13 in linkage group 24, complete sequence Length = 202859 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gaattttagaaatatgaaaa 319 |||||||||||||||||||| Sbjct: 20767 gaattttagaaatatgaaaa 20748
>gb|AC116995.3| Mus musculus BAC clone RP23-3C16 from 1, complete sequence Length = 173131 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 123 acacacacagacacaatgtacaga 146 ||||||||| |||||||||||||| Sbjct: 37970 acacacacatacacaatgtacaga 37947
>gb|AC113999.3| Mus musculus BAC clone RP23-148D9 from 16, complete sequence Length = 209083 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 cagaagccatgaattttaga 309 |||||||||||||||||||| Sbjct: 161057 cagaagccatgaattttaga 161076
>emb|BX322575.19| Zebrafish DNA sequence from clone CH211-283E2 in linkage group 9, complete sequence Length = 149874 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gaattttagaaatatgaaaa 319 |||||||||||||||||||| Sbjct: 78460 gaattttagaaatatgaaaa 78479
>gb|AC163721.4| Mus musculus BAC clone RP23-446B19 from chromosome 13, complete sequence Length = 184728 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 actgcctagatcaaagtcca 259 |||||||||||||||||||| Sbjct: 15710 actgcctagatcaaagtcca 15729
>emb|BX470253.2| Human DNA sequence from clone RP11-653A5 on chromosome 1 Contains the 3' end of the gene for cardiac ankyrin repeat kinase (CARK), the 5' end of a novel gene and the 3' end of a novel gene, complete sequence Length = 75492 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 tcataacatcaatgatcttt 375 |||||||||||||||||||| Sbjct: 50372 tcataacatcaatgatcttt 50353
>gb|AC175612.4| Saimiri boliviensis boliviensis clone CH254-62B4, complete sequence Length = 57378 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 tcataacatcaatgatcttt 375 |||||||||||||||||||| Sbjct: 6448 tcataacatcaatgatcttt 6429
>emb|BX321904.19| Zebrafish DNA sequence from clone DKEY-279K15 in linkage group 1, complete sequence Length = 153891 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 acacagacacaatgtacaga 146 |||||||||||||||||||| Sbjct: 123249 acacagacacaatgtacaga 123268
>emb|BX038964.1|CNS09288 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAB3CD05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 638 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 aaccaacacacacagacaca 137 |||||||||||||||||||| Sbjct: 339 aaccaacacacacagacaca 358
>emb|BX038963.1|CNS09287 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAB3CD05 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 683 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 aaccaacacacacagacaca 137 |||||||||||||||||||| Sbjct: 418 aaccaacacacacagacaca 399
>gb|AC146674.3| Callithrix jacchus clone CH259-338M13, complete sequence Length = 228448 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 tcataacatcaatgatcttt 375 |||||||||||||||||||| Sbjct: 213430 tcataacatcaatgatcttt 213411
>emb|BX470263.9| Zebrafish DNA sequence from clone DKEY-15P9 in linkage group 9, complete sequence Length = 176022 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gaattttagaaatatgaaaa 319 |||||||||||||||||||| Sbjct: 7421 gaattttagaaatatgaaaa 7440
>emb|BX908740.5| Zebrafish DNA sequence from clone DKEY-88E10 in linkage group 1, complete sequence Length = 90443 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gaattttagaaatatgaaaa 319 |||||||||||||||||||| Sbjct: 47551 gaattttagaaatatgaaaa 47570
>emb|BX323590.8| Zebrafish DNA sequence from clone CH211-42I9 in linkage group 1, complete sequence Length = 178876 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gaattttagaaatatgaaaa 319 |||||||||||||||||||| Sbjct: 93032 gaattttagaaatatgaaaa 93051
>gb|AC147932.3| Saimiri boliviensis boliviensis clone CH254-331B16, complete sequence Length = 185755 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 tcataacatcaatgatcttt 375 |||||||||||||||||||| Sbjct: 181659 tcataacatcaatgatcttt 181640
>gb|AC095033.2| Homo sapiens chromosome 1 clone RP11-313A24, complete sequence Length = 157332 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 acacacacagacacaatgta 142 |||||||||||||||||||| Sbjct: 31559 acacacacagacacaatgta 31540
>emb|BX511256.9| Zebrafish DNA sequence from clone DKEY-58M10 in linkage group 1, complete sequence Length = 232496 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gaattttagaaatatgaaaa 319 |||||||||||||||||||| Sbjct: 185023 gaattttagaaatatgaaaa 185042
>emb|BX324162.8| Zebrafish DNA sequence from clone DKEY-95O3 in linkage group 15, complete sequence Length = 155540 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gaattttagaaatatgaaaa 319 |||||||||||||||||||| Sbjct: 13304 gaattttagaaatatgaaaa 13323
>gb|AC098482.2| Homo sapiens chromosome 3 clone RP11-839L21, complete sequence Length = 211533 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 ttagaaatatgaaaaggtac 324 |||||||||||||||||||| Sbjct: 38586 ttagaaatatgaaaaggtac 38567
>emb|BX072577.14| Zebrafish DNA sequence from clone CH211-151G22 in linkage group 21, complete sequence Length = 160341 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gaattttagaaatatgaaaa 319 |||||||||||||||||||| Sbjct: 99168 gaattttagaaatatgaaaa 99149
>gb|AC153652.3| Mus musculus BAC clone RP24-89C18 from chromosome 1, complete sequence Length = 168628 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 acacacacagacacaatgtacaga 146 ||||||||| |||||||||||||| Sbjct: 89579 acacacacatacacaatgtacaga 89602
>gb|AC148715.1| Macaca mulatta Major Histocompatibility Complex BAC MMU487N12, complete sequence Length = 153422 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 accaacacacacagacacaa 138 |||||||||||||||||||| Sbjct: 107140 accaacacacacagacacaa 107121
>gb|AC148713.1| Macaca mulatta Major Histocompatibility Complex BAC MMU457F04, complete sequence Length = 149331 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 accaacacacacagacacaa 138 |||||||||||||||||||| Sbjct: 49374 accaacacacacagacacaa 49355
>gb|AC148712.1| Macaca mulatta Major Histocompatibility Complex BAC MMU429H11, complete sequence Length = 155789 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 accaacacacacagacacaa 138 |||||||||||||||||||| Sbjct: 1594 accaacacacacagacacaa 1575
>gb|AC148699.1| Macaca mulatta Major Histocompatibility Complex BAC MMU274L13, complete sequence Length = 210164 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 accaacacacacagacacaa 138 |||||||||||||||||||| Sbjct: 152828 accaacacacacagacacaa 152809
>gb|AC148695.1| Macaca mulatta Major Histocompatibility Complex BAC MMU244P03, complete sequence Length = 200270 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 accaacacacacagacacaa 138 |||||||||||||||||||| Sbjct: 61881 accaacacacacagacacaa 61862
>gb|AC148686.1| Macaca mulatta Major Histocompatibility Complex BAC MMU192G09, complete sequence Length = 181166 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 accaacacacacagacacaa 138 |||||||||||||||||||| Sbjct: 164828 accaacacacacagacacaa 164809
>gb|AC148678.1| Macaca mulatta Major Histocompatibility Complex BAC MMU125A15, complete sequence Length = 172875 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 accaacacacacagacacaa 138 |||||||||||||||||||| Sbjct: 7969 accaacacacacagacacaa 7950
>gb|AC148665.1| Macaca mulatta Major Histocompatibility Complex BAC MMU023M02, complete sequence Length = 182939 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 accaacacacacagacacaa 138 |||||||||||||||||||| Sbjct: 9934 accaacacacacagacacaa 9915
>emb|BX897685.6| Zebrafish DNA sequence from clone CH211-234H8, complete sequence Length = 179286 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gaattttagaaatatgaaaa 319 |||||||||||||||||||| Sbjct: 18652 gaattttagaaatatgaaaa 18633
>emb|BX470076.3| Zebrafish DNA sequence from clone DKEY-103E21 in linkage group 5, complete sequence Length = 112637 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gaattttagaaatatgaaaa 319 |||||||||||||||||||| Sbjct: 86295 gaattttagaaatatgaaaa 86314
>emb|BX784031.5| Zebrafish DNA sequence from clone DKEY-174E15 in linkage group 21, complete sequence Length = 231014 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gaattttagaaatatgaaaa 319 |||||||||||||||||||| Sbjct: 209568 gaattttagaaatatgaaaa 209587
>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds Length = 3284914 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 accaacacacacagacacaa 138 |||||||||||||||||||| Sbjct: 1131243 accaacacacacagacacaa 1131262 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 accaacacacacagacacaa 138 |||||||||||||||||||| Sbjct: 972316 accaacacacacagacacaa 972335 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 accaacacacacagacacaa 138 |||||||||||||||||||| Sbjct: 671821 accaacacacacagacacaa 671840
>gb|AC064869.6| Homo sapiens BAC clone RP11-534J18 from 2, complete sequence Length = 169514 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 602 gaagaatgttgtcatcatca 621 |||||||||||||||||||| Sbjct: 135286 gaagaatgttgtcatcatca 135267
>gb|AC138776.2| Homo sapiens BAC clone RP11-1277N13 from UL, complete sequence Length = 202926 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 448 atagtcaccgttttgtgtgcatgg 471 ||||||||| |||||||||||||| Sbjct: 54317 atagtcacctttttgtgtgcatgg 54340
>emb|BX294160.6| Zebrafish DNA sequence from clone CH211-285I13 in linkage group 2, complete sequence Length = 151660 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 gaattttagaaatatgaaaa 319 |||||||||||||||||||| Sbjct: 58764 gaattttagaaatatgaaaa 58745
>emb|BX001036.12| Zebrafish DNA sequence from clone CH211-155G22 in linkage group 1, complete sequence Length = 178860 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gaattttagaaatatgaaaa 319 |||||||||||||||||||| Sbjct: 98145 gaattttagaaatatgaaaa 98164
>gb|AC013464.6| Homo sapiens BAC clone RP11-337D5 from UL, complete sequence Length = 195161 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 602 gaagaatgttgtcatcatca 621 |||||||||||||||||||| Sbjct: 180869 gaagaatgttgtcatcatca 180888
>gb|AC148030.2| Homo sapiens chromosome UNKNOWN clone RP11-134K23, complete sequence Length = 157579 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 448 atagtcaccgttttgtgtgcatgg 471 ||||||||| |||||||||||||| Sbjct: 140811 atagtcacctttttgtgtgcatgg 140788
>emb|AL928946.17| Zebrafish DNA sequence from clone CH211-265D20 in linkage group 20, complete sequence Length = 157379 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gaattttagaaatatgaaaa 319 |||||||||||||||||||| Sbjct: 41237 gaattttagaaatatgaaaa 41256
>emb|BX571672.10| Human DNA sequence from clone RP11-782C8 on chromosome 1, complete sequence Length = 175055 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 448 atagtcaccgttttgtgtgcatgg 471 ||||||||| |||||||||||||| Sbjct: 153545 atagtcacctttttgtgtgcatgg 153522
>emb|AL928851.6| Zebrafish DNA sequence from clone CH211-244E12 in linkage group 20, complete sequence Length = 96043 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gaattttagaaatatgaaaa 319 |||||||||||||||||||| Sbjct: 45927 gaattttagaaatatgaaaa 45946
>emb|CR769778.10| Zebrafish DNA sequence from clone CH211-147N12 in linkage group 18, complete sequence Length = 162450 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gaattttagaaatatgaaaa 319 |||||||||||||||||||| Sbjct: 12358 gaattttagaaatatgaaaa 12377
>gb|AC154533.2| Mus musculus BAC clone RP23-469N16 from 16, complete sequence Length = 187213 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 cagaagccatgaattttaga 309 |||||||||||||||||||| Sbjct: 167224 cagaagccatgaattttaga 167205
>emb|AL845314.10| Zebrafish DNA sequence from clone CH211-153N11 in linkage group 20, complete sequence Length = 179498 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gaattttagaaatatgaaaa 319 |||||||||||||||||||| Sbjct: 155350 gaattttagaaatatgaaaa 155369
>emb|BX323886.7| Zebrafish DNA sequence from clone CH211-127B11 in linkage group 4, complete sequence Length = 158224 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gaattttagaaatatgaaaa 319 |||||||||||||||||||| Sbjct: 10421 gaattttagaaatatgaaaa 10440
>emb|BX000362.6| Zebrafish DNA sequence from clone DKEYP-93D12 in linkage group 20, complete sequence Length = 205186 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gaattttagaaatatgaaaa 319 |||||||||||||||||||| Sbjct: 88194 gaattttagaaatatgaaaa 88213
>emb|BX001021.7| Zebrafish DNA sequence from clone BUSM1-140K9 in linkage group 20, complete sequence Length = 110590 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 gaattttagaaatatgaaaa 319 |||||||||||||||||||| Sbjct: 73022 gaattttagaaatatgaaaa 73041
>emb|AL137218.5| Human DNA sequence from clone RP11-111E21, complete sequence Length = 137718 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 448 atagtcaccgttttgtgtgcatgg 471 ||||||||| |||||||||||||| Sbjct: 109711 atagtcacctttttgtgtgcatgg 109688
>dbj|AK113965.1| Ciona intestinalis cDNA, clone:cicl019d22, full insert sequence Length = 1105 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 298 atgaattttagaaatatgaa 317 |||||||||||||||||||| Sbjct: 966 atgaattttagaaatatgaa 947
>emb|BX511022.7| Human DNA sequence from clone RP11-134H2 on chromosome 1, complete sequence Length = 80115 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 448 atagtcaccgttttgtgtgcatgg 471 ||||||||| |||||||||||||| Sbjct: 51050 atagtcacctttttgtgtgcatgg 51073
>emb|AL831740.9| Mouse DNA sequence from clone RP23-395P16 on chromosome 4, complete sequence Length = 166965 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 610 ttgtcatcatcaggctcttc 629 |||||||||||||||||||| Sbjct: 57864 ttgtcatcatcaggctcttc 57883
>emb|Z48585.1|CEZK673 Caenorhabditis elegans Cosmid ZK673, complete sequence Length = 27540 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 aattttagaaatatgaaaag 320 |||||||||||||||||||| Sbjct: 8187 aattttagaaatatgaaaag 8168
>gb|AC158526.3| Mus musculus BAC clone RP23-288A9 from chromosome 12, complete sequence Length = 236362 Score = 40.1 bits (20), Expect = 9.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 120 ccaacacacacagacacaatgtacagat 147 |||||||||||| |||||||||| |||| Sbjct: 41652 ccaacacacacacacacaatgtaaagat 41679
>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold Length = 2105003 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 tcataacatcaatgatcttt 375 |||||||||||||||||||| Sbjct: 1924560 tcataacatcaatgatcttt 1924541
>gb|AC163621.5| Mus musculus BAC clone RP23-122H1 from chromosome 13, complete sequence Length = 194866 Score = 40.1 bits (20), Expect = 9.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 actgcctagatcaaagtcca 259 |||||||||||||||||||| Sbjct: 13812 actgcctagatcaaagtcca 13793
>gb|AC008429.6| Homo sapiens chromosome 5 clone CTC-308K20, complete sequence Length = 159423 Score = 40.1 bits (20), Expect = 9.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 aacacacacagacacaatgtacag 145 |||||||||||||||| ||||||| Sbjct: 101324 aacacacacagacacattgtacag 101347 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,982,208 Number of Sequences: 3902068 Number of extensions: 6982208 Number of successful extensions: 213856 Number of sequences better than 10.0: 107 Number of HSP's better than 10.0 without gapping: 107 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 213371 Number of HSP's gapped (non-prelim): 477 length of query: 685 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 662 effective length of database: 17,143,297,704 effective search space: 11348863080048 effective search space used: 11348863080048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
