| Clone Name | rbags15k20 |
|---|---|
| Clone Library Name | barley_pub |
>GPDA_PSEPK (Q88FC9) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 341 Score = 30.0 bits (66), Expect = 1.6 Identities = 13/36 (36%), Positives = 22/36 (61%) Frame = +2 Query: 32 QVLHQLSPTKRREVHTPPNCTAKLTSHAFSSTVXAS 139 Q+L +++P R V + PN ++ HA ++TV AS Sbjct: 120 QILEEIAPEARIGVLSGPNLAREIAEHALTATVVAS 155
>CASC5_MOUSE (Q66JQ7) Protein CASC5 (Cancer susceptibility candidate gene 5| protein homolog) Length = 1612 Score = 29.3 bits (64), Expect = 2.7 Identities = 20/63 (31%), Positives = 27/63 (42%) Frame = -1 Query: 197 LGFRRXEDAESVNRSSDKVTKQXPLKRKRER*AWRYSLGEYEPPCASSAIVGAAPVDNIE 18 LG R D ES ++ T PLK + R SLG + P S VD++E Sbjct: 1428 LGSRNDRDEESKTFCNEAETTSVPLKTAVKDKTRRCSLGIFLPKLPSKRSCSITGVDDLE 1487 Query: 17 SML 9 +L Sbjct: 1488 QIL 1490
>Y661_METJA (Q58075) Hypothetical protein MJ0661| Length = 182 Score = 28.9 bits (63), Expect = 3.5 Identities = 16/57 (28%), Positives = 28/57 (49%) Frame = -1 Query: 278 YCAGRYITDIGVRKDVAKVXVENLPSHLGFRRXEDAESVNRSSDKVTKQXPLKRKRE 108 YC G Y+ D V + K E + +LGF D E R+ +++ ++ RK++ Sbjct: 126 YCRGLYLGDGKVEDEYFKYA-ELVLKYLGFEEGVDEEEFKRAKERLLEESLKYRKKK 181
>GPDA_PSESM (Q883Y4) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 341 Score = 28.9 bits (63), Expect = 3.5 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = +2 Query: 32 QVLHQLSPTKRREVHTPPNCTAKLTSHAFSSTVXAS 139 Q+L ++ P R V + PN ++ HA ++TV AS Sbjct: 120 QILEEIVPQARIGVLSGPNLAREIAEHALTATVVAS 155
>TRI35_HUMAN (Q9UPQ4) Tripartite motif protein 35 (Hemopoeitic lineage switch| protein 5) Length = 493 Score = 27.7 bits (60), Expect = 7.8 Identities = 18/55 (32%), Positives = 23/55 (41%) Frame = +3 Query: 93 PPSSPLTLSLQRXLLRHLV*ASVHRFRIFRTAETEVRWQVFHLHFGHILSYSYVG 257 P +SPL L++ R L L F AE FH FG + Y Y+G Sbjct: 415 PATSPLVLAIPRRLRVEL--ECEEGELSFYDAERHCHLYTFHARFGEVRPYFYLG 467
>PQQF_PSESM (Q88A79) Coenzyme PQQ synthesis protein F (EC 3.4.99.-)| (Pyrroloquinoline quinone biosynthesis protein F) Length = 779 Score = 27.7 bits (60), Expect = 7.8 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = -1 Query: 89 SLGEYEPPCASSAIVGAAPVDNIESML 9 +L E S+A++G+APVDN++S L Sbjct: 381 ALRELLEQLTSNALIGSAPVDNLDSTL 407 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,821,887 Number of Sequences: 219361 Number of extensions: 606241 Number of successful extensions: 1736 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1704 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1736 length of database: 80,573,946 effective HSP length: 74 effective length of database: 64,341,232 effective search space used: 1544189568 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)