ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags15k17 |
|---|---|
| Clone Library Name | barley_pub |
>PTR2_ARATH (P46032) Peptide transporter PTR2 (Histidine-transporting protein)| Length = 585 Score = 172 bits (436), Expect = 8e-43 Identities = 90/225 (40%), Positives = 136/225 (60%), Gaps = 1/225 (0%) Frame = -2 Query: 678 IYAVVFAQWMTLFTKQASTLDRWIGSLQIPAAALQXXXXXXXXXXIPIYDQILVPLARKY 499 I++ V+AQ T+F +Q ++ IGS Q+P AAL +P+YD+ +VPLARK+ Sbjct: 359 IFSAVYAQMSTMFVQQGRAMNCKIGSFQLPPAALGTFDTASVIIWVPLYDRFIVPLARKF 418 Query: 498 SKNPCGITPLQRIGTGLAISVILMVVAALVEMRRLRVAREYGLVDKPEATIPMSFWWVVP 319 + G T +QR+G GL +SV+ M AA+VE+ RL +A + GLV+ A +P+S W +P Sbjct: 419 TGVDKGFTEIQRMGIGLFVSVLCMAAAAIVEIIRLHMANDLGLVES-GAPVPISVLWQIP 477 Query: 318 QFVLTGLADMFTVVGLQEFFYDQVPEDLRSMGLALYLXXXXXXXXXXXILVYAIDWVTS- 142 Q+ + G A++F +G EFFYDQ P+ +RS+ AL L +++ + + T+ Sbjct: 478 QYFILGAAEVFYFIGQLEFFYDQSPDAMRSLCSALALLTNALGNYLSSLILTLVTYFTTR 537 Query: 141 NGGDSWFSDNLNRGHLDYFYWLLAVLSVXWAGCFLYFSQVYIHKK 7 NG + W SDNLN GHLDYF+WLLA LS+ + + + Y KK Sbjct: 538 NGQEGWISDNLNSGHLDYFFWLLAGLSLVNMAVYFFSAARYKQKK 582 Score = 31.6 bits (70), Expect = 2.3 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 6/91 (6%) Frame = +2 Query: 386 ATLSLLISTRAATTIKITEMASPVPILCKGVIPQGFFEYFLASGTSIWSYIG-----IEM 550 A + +I A + + E +PVPI IPQ YF+ ++ +IG + Sbjct: 445 AAIVEIIRLHMANDLGLVESGAPVPISVLWQIPQ----YFILGAAEVFYFIGQLEFFYDQ 500 Query: 551 TIDTLIRLCRAAAGICR-LPIHLSSVLACLV 640 + D + LC A A + L +LSS++ LV Sbjct: 501 SPDAMRSLCSALALLTNALGNYLSSLILTLV 531
>CHL1_ARATH (Q05085) Nitrate/chlorate transporter| Length = 590 Score = 142 bits (359), Expect = 7e-34 Identities = 79/225 (35%), Positives = 121/225 (53%) Frame = -2 Query: 678 IYAVVFAQWMTLFTKQASTLDRWIGSLQIPAAALQXXXXXXXXXXIPIYDQILVPLARKY 499 ++ V AQ TL Q+ TLDR IGS +IP A++ +YD++ + L +K Sbjct: 351 LFWTVHAQLTTLSVAQSETLDRSIGSFEIPPASMAVFYVGGLLLTTAVYDRVAIRLCKKL 410 Query: 498 SKNPCGITPLQRIGTGLAISVILMVVAALVEMRRLRVAREYGLVDKPEATIPMSFWWVVP 319 P G+ PLQRIG GL + M VAALVE++RLR A +G K T+P+ F+ ++P Sbjct: 411 FNYPHGLRPLQRIGLGLFFGSMAMAVAALVELKRLRTAHAHGPTVK---TLPLGFYLLIP 467 Query: 318 QFVLTGLADMFTVVGLQEFFYDQVPEDLRSMGLALYLXXXXXXXXXXXILVYAIDWVTSN 139 Q+++ G+ + G +FF + P+ ++ M L L +LV ++ T Sbjct: 468 QYLIVGIGEALIYTGQLDFFLRECPKGMKGMSTGLLLSTLALGFFFSSVLVTIVEKFTGK 527 Query: 138 GGDSWFSDNLNRGHLDYFYWLLAVLSVXWAGCFLYFSQVYIHKKK 4 W +D+LN+G L FYWL+AVL FL FS+ Y++K+K Sbjct: 528 -AHPWIADDLNKGRLYNFYWLVAVLVALNFLIFLVFSKWYVYKEK 571
>PTR2_YEAST (P32901) Peptide transporter PTR2 (Peptide permease PTR2)| Length = 601 Score = 43.5 bits (101), Expect = 6e-04 Identities = 33/157 (21%), Positives = 66/157 (42%) Frame = -2 Query: 678 IYAVVFAQWMTLFTKQASTLDRWIGSLQIPAAALQXXXXXXXXXXIPIYDQILVPLARKY 499 IY + ++ F QAS ++ IP LQ IPI+++ + P R+Y Sbjct: 360 IYWTQYGTMISSFITQASMMELH----GIPNDFLQAFDSIALIIFIPIFEKFVYPFIRRY 415 Query: 498 SKNPCGITPLQRIGTGLAISVILMVVAALVEMRRLRVAREYGLVDKPEATIPMSFWWVVP 319 + + P+ +I G M AA+++ + Y + W +P Sbjct: 416 TP----LKPITKIFFGFMFGSFAMTWAAVLQSFVYKAGPWYNEPLGHNTPNHVHVCWQIP 471 Query: 318 QFVLTGLADMFTVVGLQEFFYDQVPEDLRSMGLALYL 208 +VL +++F + E+ Y + P ++S ++++L Sbjct: 472 AYVLISFSEIFASITGLEYAYSKAPASMKSFIMSIFL 508
>S15A2_RAT (Q63424) Oligopeptide transporter, kidney isoform (Peptide| transporter 2) (Kidney H(+)/peptide cotransporter) (Solute carrier family 15 member 2) Length = 729 Score = 35.8 bits (81), Expect = 0.12 Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%) Frame = -2 Query: 342 MSFWWVVPQFVLTGLAD-MFTVVGLQEFFYDQVPEDLRSMGLALYL 208 +S W +PQ+VL A+ MF+V GL EF Y Q P ++S+ A +L Sbjct: 606 LSIAWQLPQYVLVTAAEVMFSVTGL-EFSYSQAPSSMKSVLQAAWL 650
>S15A2_MOUSE (Q9ES07) Oligopeptide transporter, kidney isoform (Peptide| transporter 2) (Kidney H(+)/peptide cotransporter) (Solute carrier family 15 member 2) Length = 729 Score = 35.8 bits (81), Expect = 0.12 Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%) Frame = -2 Query: 342 MSFWWVVPQFVLTGLAD-MFTVVGLQEFFYDQVPEDLRSMGLALYL 208 +S W +PQ+VL A+ MF+V GL EF Y Q P ++S+ A +L Sbjct: 606 LSIAWQLPQYVLVTAAEVMFSVTGL-EFSYSQAPSSMKSVLQAAWL 650 Score = 32.0 bits (71), Expect = 1.8 Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 2/83 (2%) Frame = -2 Query: 642 FTKQASTLDRWIGSLQIPAAALQXXXXXXXXXXIPIYDQILVPLARKYSKNPCGI--TPL 469 +T QA+ +D +G + +Q IP++D ++ L K CG+ + L Sbjct: 323 WTLQANKMDGDLGFFVLQPDQMQVLNPFLVLVFIPLFDLVIYRLISK-----CGVNFSSL 377 Query: 468 QRIGTGLAISVILMVVAALVEMR 400 +++ G+ ++ + VAALVE++ Sbjct: 378 RKMAVGMILACLAFAVAALVEIK 400
>OPT1_DROME (P91679) Oligopeptide transporter 1 (Protein YIN)| Length = 743 Score = 35.4 bits (80), Expect = 0.16 Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 2/100 (2%) Frame = -2 Query: 678 IYAVVFAQWMTLFTKQASTLDRWIGSLQIPAAALQXXXXXXXXXXIPIYDQILVP-LARK 502 ++ +F Q + +T QA+ +D + QI +Q +P++D I+ P LAR Sbjct: 299 VFWALFDQQGSRWTFQATRMDGNVLGFQIKPDQMQVVNPLLILGFLPLFDYIIYPALAR- 357 Query: 501 YSKNPCGIT-PLQRIGTGLAISVILMVVAALVEMRRLRVA 385 CGI PLQ++ GL ++ + ++A +EM+ + A Sbjct: 358 -----CGIRRPLQKLTLGLLLAALGFFLSAGLEMKMEQAA 392 Score = 32.0 bits (71), Expect = 1.8 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%) Frame = -2 Query: 342 MSFWWVVPQFVLTGLAD-MFTVVGLQEFFYDQVPEDLRSMGLALYL 208 +S W +PQ V+ A+ MF+V GL EF Y Q P ++S+ A +L Sbjct: 591 VSILWQLPQIVVMTAAEVMFSVTGL-EFSYSQSPPSMKSVLQACWL 635
>GALT2_MOUSE (Q6PB93) Polypeptide N-acetylgalactosaminyltransferase 2 (EC| 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 2) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 2) (Polypeptide GalNAc transferase 2) (GalNAc-T2) (pp-GaNTase 2) Length = 570 Score = 34.7 bits (78), Expect = 0.27 Identities = 21/51 (41%), Positives = 25/51 (49%) Frame = -1 Query: 463 DWNRTSHLSDLDGCRGPRGDEKAQGSERIWPSGQT*SNDSDELLVGGTSVR 311 DWN + D RGDEKAQG E + P + + E VGGT VR Sbjct: 43 DWNDIDSIKKKD-LHHSRGDEKAQGVETLPPGKVRWPDFNQEAYVGGTMVR 92
>S15A2_HUMAN (Q16348) Oligopeptide transporter, kidney isoform (Peptide| transporter 2) (Kidney H(+)/peptide cotransporter) (Solute carrier family 15 member 2) Length = 729 Score = 33.9 bits (76), Expect = 0.47 Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Frame = -2 Query: 342 MSFWWVVPQFVLTGLAD-MFTVVGLQEFFYDQVPEDLRSMGLALYL 208 MS W +PQ+ L + MF+V GL EF Y Q P ++S+ A +L Sbjct: 606 MSIRWQLPQYALVTAGEVMFSVTGL-EFSYSQAPSSMKSVLQAAWL 650
>S15A2_RABIT (P46029) Oligopeptide transporter, kidney isoform (Peptide| transporter 2) (Kidney H(+)/peptide cotransporter) (Solute carrier family 15 member 2) Length = 729 Score = 32.3 bits (72), Expect = 1.4 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Frame = -2 Query: 342 MSFWWVVPQFVLTGLAD-MFTVVGLQEFFYDQVPEDLRSMGLALYL 208 +S W +PQ+ L + MF+V GL EF Y Q P ++S+ A +L Sbjct: 606 VSIAWQLPQYALVTAGEVMFSVTGL-EFSYSQAPSSMKSVLQAAWL 650
>ZAN_MOUSE (O88799) Zonadhesin precursor| Length = 5376 Score = 32.0 bits (71), Expect = 1.8 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Frame = +3 Query: 75 EASRSNRDGLGLDCPRTNYLRRCW--LPSQSHTPECYCRSSRPRICSGIRQGPYC 233 E SN + CP ++ C+ P PE +C +S PR+ S R+G C Sbjct: 3644 EDGSSNCARIPPQCPANSHYTDCFPPCPPSCSDPEGHCEASGPRVLSTCREGCLC 3698
>KCNG3_MOUSE (P59053) Potassium voltage-gated channel subfamily G member 3| (Voltage-gated potassium channel subunit Kv6.3) (Kv10.1) Length = 433 Score = 31.6 bits (70), Expect = 2.3 Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 5/86 (5%) Frame = -2 Query: 522 LVPLARKY-SKNPCGITPLQRIGTGLAISVILMVVAALVEMRRLRVAREYGL----VDKP 358 ++ LAR + G+T L+R +A+ ++ + VA + L E+GL +K Sbjct: 296 VIKLARHFIGLQTLGLT-LKRCYREMAMLLVFICVAMAI-FSALSQLLEHGLDLETSNKD 353 Query: 357 EATIPMSFWWVVPQFVLTGLADMFTV 280 A+IP + WWV+ G DM+ + Sbjct: 354 FASIPAACWWVIISMTTVGYGDMYPI 379
>S15A1_RABIT (P36836) Oligopeptide transporter, small intestine isoform (Peptide| transporter 1) (Intestinal H(+)/peptide cotransporter) (Solute carrier family 15 member 1) Length = 707 Score = 31.2 bits (69), Expect = 3.0 Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 1/48 (2%) Frame = -2 Query: 366 DKPEATIPMSFWWVVPQ-FVLTGLADMFTVVGLQEFFYDQVPEDLRSM 226 D P T+ M+ W +PQ F++T +F++ GL EF Y Q P +++S+ Sbjct: 572 DIPPNTMNMA--WQIPQYFLITSGEVVFSITGL-EFSYSQAPSNMKSV 616
>KCNG3_RAT (Q8R523) Potassium voltage-gated channel subfamily G member 3| (Voltage-gated potassium channel subunit Kv6.3) (Kv10.1) Length = 433 Score = 31.2 bits (69), Expect = 3.0 Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 4/59 (6%) Frame = -2 Query: 444 ISVILMVVAALVEMRRLRVAREYGL----VDKPEATIPMSFWWVVPQFVLTGLADMFTV 280 + +++ + A+ L E+GL +K A+IP + WWV+ G DM+ + Sbjct: 321 VMLLVFICVAMAIFSALSQLLEHGLDLETSNKDFASIPAACWWVIISMTTVGYGDMYPI 379
>OPT3_CAEEL (O01840) Putative oligopeptide transporter opt-3| Length = 701 Score = 31.2 bits (69), Expect = 3.0 Identities = 15/58 (25%), Positives = 33/58 (56%) Frame = -2 Query: 381 EYGLVDKPEATIPMSFWWVVPQFVLTGLADMFTVVGLQEFFYDQVPEDLRSMGLALYL 208 ++ L+ +P + +S W +PQ+++ L ++ V EF Y Q +++S+ A++L Sbjct: 563 DFNLLVRPNS---VSILWSLPQYIIITLGEVLLSVTGLEFAYSQAAPNMKSVLTAMWL 617
>OPT1_CAEEL (Q17758) Oligopeptide transporter 1 (Di-/tri-peptide transporter| CPTA) Length = 785 Score = 30.8 bits (68), Expect = 4.0 Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%) Frame = -2 Query: 342 MSFWWVVPQFV-LTGLADMFTVVGLQEFFYDQVPEDLRSMGLALYL 208 +S W +PQ+V LT +F++ GL EF Y + L+S+ AL+L Sbjct: 668 VSILWQIPQYVILTAGEVLFSITGL-EFAYTEASPQLKSVVQALWL 712
>GLMS_STAAW (Q8NVE6) Glucosamine--fructose-6-phosphate aminotransferase| [isomerizing] (EC 2.6.1.16) (Hexosephosphate aminotransferase) (D-fructose-6-phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase) (Glucosamine-6-ph Length = 600 Score = 30.4 bits (67), Expect = 5.2 Identities = 23/65 (35%), Positives = 33/65 (50%) Frame = +1 Query: 127 TISAVAGYPVNRIHQNATAEAPGPEYAQV*GKAHTAQILRHLVVEEFLQAHHCEHVRQAG 306 TI+ VAG ++R + GPE A KA+TAQI ++ + + EH R+A Sbjct: 369 TITNVAGSTLSREADHTLLLHAGPEIAVASTKAYTAQIAVLSILSQIVAK---EHGREAD 425 Query: 307 QDELR 321 D LR Sbjct: 426 IDLLR 430
>GLMS_STAAS (Q6G7F8) Glucosamine--fructose-6-phosphate aminotransferase| [isomerizing] (EC 2.6.1.16) (Hexosephosphate aminotransferase) (D-fructose-6-phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase) (Glucosamine-6-ph Length = 600 Score = 30.4 bits (67), Expect = 5.2 Identities = 23/65 (35%), Positives = 33/65 (50%) Frame = +1 Query: 127 TISAVAGYPVNRIHQNATAEAPGPEYAQV*GKAHTAQILRHLVVEEFLQAHHCEHVRQAG 306 TI+ VAG ++R + GPE A KA+TAQI ++ + + EH R+A Sbjct: 369 TITNVAGSTLSREADHTLLLHAGPEIAVASTKAYTAQIAVLSILSQIVAK---EHGREAD 425 Query: 307 QDELR 321 D LR Sbjct: 426 IDLLR 430
>GLMS_STAAR (Q6GES3) Glucosamine--fructose-6-phosphate aminotransferase| [isomerizing] (EC 2.6.1.16) (Hexosephosphate aminotransferase) (D-fructose-6-phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase) (Glucosamine-6-ph Length = 600 Score = 30.4 bits (67), Expect = 5.2 Identities = 23/65 (35%), Positives = 33/65 (50%) Frame = +1 Query: 127 TISAVAGYPVNRIHQNATAEAPGPEYAQV*GKAHTAQILRHLVVEEFLQAHHCEHVRQAG 306 TI+ VAG ++R + GPE A KA+TAQI ++ + + EH R+A Sbjct: 369 TITNVAGSTLSREADHTLLLHAGPEIAVASTKAYTAQIAVLSILSQIVAK---EHGREAD 425 Query: 307 QDELR 321 D LR Sbjct: 426 IDLLR 430
>GLMS_STAAN (P64228) Glucosamine--fructose-6-phosphate aminotransferase| [isomerizing] (EC 2.6.1.16) (Hexosephosphate aminotransferase) (D-fructose-6-phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase) (Glucosamine-6-ph Length = 600 Score = 30.4 bits (67), Expect = 5.2 Identities = 23/65 (35%), Positives = 33/65 (50%) Frame = +1 Query: 127 TISAVAGYPVNRIHQNATAEAPGPEYAQV*GKAHTAQILRHLVVEEFLQAHHCEHVRQAG 306 TI+ VAG ++R + GPE A KA+TAQI ++ + + EH R+A Sbjct: 369 TITNVAGSTLSREADHTLLLHAGPEIAVASTKAYTAQIAVLSILSQIVAK---EHGREAD 425 Query: 307 QDELR 321 D LR Sbjct: 426 IDLLR 430
>GLMS_STAAM (P64227) Glucosamine--fructose-6-phosphate aminotransferase| [isomerizing] (EC 2.6.1.16) (Hexosephosphate aminotransferase) (D-fructose-6-phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase) (Glucosamine-6-ph Length = 600 Score = 30.4 bits (67), Expect = 5.2 Identities = 23/65 (35%), Positives = 33/65 (50%) Frame = +1 Query: 127 TISAVAGYPVNRIHQNATAEAPGPEYAQV*GKAHTAQILRHLVVEEFLQAHHCEHVRQAG 306 TI+ VAG ++R + GPE A KA+TAQI ++ + + EH R+A Sbjct: 369 TITNVAGSTLSREADHTLLLHAGPEIAVASTKAYTAQIAVLSILSQIVAK---EHGREAD 425 Query: 307 QDELR 321 D LR Sbjct: 426 IDLLR 430
>GLMS_STAAC (Q5HE49) Glucosamine--fructose-6-phosphate aminotransferase| [isomerizing] (EC 2.6.1.16) (Hexosephosphate aminotransferase) (D-fructose-6-phosphate amidotransferase) (GFAT) (L-glutamine-D-fructose-6-phosphate amidotransferase) (Glucosamine-6-ph Length = 600 Score = 30.4 bits (67), Expect = 5.2 Identities = 23/65 (35%), Positives = 33/65 (50%) Frame = +1 Query: 127 TISAVAGYPVNRIHQNATAEAPGPEYAQV*GKAHTAQILRHLVVEEFLQAHHCEHVRQAG 306 TI+ VAG ++R + GPE A KA+TAQI ++ + + EH R+A Sbjct: 369 TITNVAGSTLSREADHTLLLHAGPEIAVASTKAYTAQIAVLSILSQIVAK---EHGREAD 425 Query: 307 QDELR 321 D LR Sbjct: 426 IDLLR 430
>DBP8_YARLI (Q6C799) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 442 Score = 30.0 bits (66), Expect = 6.7 Identities = 22/70 (31%), Positives = 33/70 (47%) Frame = -2 Query: 516 PLARKYSKNPCGITPLQRIGTGLAISVILMVVAALVEMRRLRVAREYGLVDKPEATIPMS 337 P+ ++SK+PCGI L T I AL +RVA YG VD + ++ + Sbjct: 58 PMLAEWSKDPCGIFGLVLTPTRELAIQIAEQFTALGANMNIRVALIYGGVDMVKQSLELQ 117 Query: 336 FWWVVPQFVL 307 +P FV+ Sbjct: 118 ---KMPHFVI 124
>ASHH2_ARATH (Q2LAE1) Histone-lysine N-methyltransferase, H3 lysine-4 and H3| lysine-36 specific ASHH2 (EC 2.1.1.43) (H3-K4-HMTase) (H3-K36-HMTase) (Histone H3-K36 methyltransferase 8) (ASH1-homolog protein 2) (Protein EARLY FLOWERING IN SHORT DAYS) (Prote Length = 1759 Score = 30.0 bits (66), Expect = 6.7 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%) Frame = -1 Query: 400 KAQGSERIWPSGQT*SNDSDELL--VGGTSVRPDRPGGHVHSGGLARILLRPSAGGSAQY 227 K++GSE++ PS +T +ELL VGG S R D G+ L +LL ++ G+ + Sbjct: 1361 KSKGSEKVSPSIETFEGKLNELLDAVGGISKRRDSAKGY-----LKLLLLTAASRGTDEE 1415 Query: 226 G 224 G Sbjct: 1416 G 1416
>GALT2_HUMAN (Q10471) Polypeptide N-acetylgalactosaminyltransferase 2 (EC| 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 2) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 2) (Polypeptide GalNAc transferase 2) (GalNAc-T2) (pp-GaNTase 2) Length = 571 Score = 30.0 bits (66), Expect = 6.7 Identities = 18/52 (34%), Positives = 24/52 (46%) Frame = -1 Query: 466 KDWNRTSHLSDLDGCRGPRGDEKAQGSERIWPSGQT*SNDSDELLVGGTSVR 311 +DWN + D G+EKAQ E + P + + E VGGT VR Sbjct: 43 EDWNEIDPIKKKD-LHHSNGEEKAQSMETLPPGKVRWPDFNQEAYVGGTMVR 93
>KCNG1_HUMAN (Q9UIX4) Potassium voltage-gated channel subfamily G member 1| (Voltage-gated potassium channel subunit Kv6.1) (kH2) Length = 513 Score = 30.0 bits (66), Expect = 6.7 Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%) Frame = -2 Query: 438 VILMVVAALVEMRRLRVAREYGLVDKPEAT-IPMSFWWVVPQFVLTGLADM 289 ++L + A+ L E + D PE T IP +WW V G DM Sbjct: 380 LLLFLCVAIALFAPLLYVIENEMADSPEFTSIPACYWWAVITMTTVGYGDM 430
>KCNG3_HUMAN (Q8TAE7) Potassium voltage-gated channel subfamily G member 3| (Voltage-gated potassium channel subunit Kv6.3) (Kv10.1) Length = 436 Score = 29.6 bits (65), Expect = 8.8 Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 4/59 (6%) Frame = -2 Query: 444 ISVILMVVAALVEMRRLRVAREYGL----VDKPEATIPMSFWWVVPQFVLTGLADMFTV 280 + +++ + A+ L E+GL +K +IP + WWV+ G DM+ + Sbjct: 324 VMLLVFICVAMAIFSALSQLLEHGLDLETSNKDFTSIPAACWWVIISMTTVGYGDMYPI 382
>PAAD_CHLPN (Q9Z8S4) Probable aromatic acid decarboxylase (EC 4.1.1.-)| Length = 192 Score = 29.6 bits (65), Expect = 8.8 Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 14/99 (14%) Frame = -2 Query: 489 PCGITPLQRIGTGLAISVILMVVAALVEMRR--LRVAREYGL----------VDKPEATI 346 PC +T + I GLA +++ V ++ RR + V RE L + K ATI Sbjct: 90 PCSMTTVAAISIGLADNLLRRVADVALKERRPLILVPRETPLHTIHLENLLKLSKSGATI 149 Query: 345 --PMSFWWVVPQFVLTGLADMFTVVGLQEFFYDQVPEDL 235 PM W+ PQ V D+ + + Y +P DL Sbjct: 150 FPPMPMWYFKPQSV----EDLENALVGKILAYLNIPSDL 184
>NUP62_HUMAN (P37198) Nuclear pore glycoprotein p62 (62 kDa nucleoporin)| Length = 522 Score = 29.6 bits (65), Expect = 8.8 Identities = 18/50 (36%), Positives = 25/50 (50%) Frame = +2 Query: 311 TN*GTTHQKLIGIVASGLSTRPYSLATLSLLISTRAATTIKITEMASPVP 460 T T I ++G S +P + ATL +T AATT T+ A+P P Sbjct: 161 TGGSTAQPSGFNIGSAGNSAQPTAPATLPFTPATPAATTAGATQPAAPTP 210 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 104,840,341 Number of Sequences: 219361 Number of extensions: 2376878 Number of successful extensions: 6745 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 6392 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6738 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6655306086 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
