| Clone Name | rbags15k16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | NAB2_YEAST (P32505) Nuclear polyadenylated RNA-binding protein NAB2 | 30 | 5.3 |
|---|
>NAB2_YEAST (P32505) Nuclear polyadenylated RNA-binding protein NAB2| Length = 525 Score = 30.4 bits (67), Expect = 5.3 Identities = 22/61 (36%), Positives = 29/61 (47%) Frame = -2 Query: 423 LEDKEGEHMTKEVQREVESAVKRKTNGKAPKIILD*LIQSESRTMVLCKPVGLKSSHSCP 244 L E E + KE++R E KRK + A K + +VLCK L S+ SCP Sbjct: 299 LHPNEDEELMKEMERTREEFQKRKADLLAAKR------KPVQTGIVLCKFGALCSNPSCP 352 Query: 243 F 241 F Sbjct: 353 F 353 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,538,035 Number of Sequences: 219361 Number of extensions: 1550179 Number of successful extensions: 4283 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 4177 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4282 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6856295237 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)