| Clone Name | rbags15k08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY366475.1| Triticum aestivum plastidic alpha 1,4-glucan phosphorylase 3 mRNA, partial cds Length = 1983 Score = 692 bits (349), Expect = 0.0 Identities = 367/373 (98%) Strand = Plus / Minus Query: 253 aggttcctggaaactgcttgaattactcagggcatgatgacggggctgatatcccatatg 312 |||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct: 1664 aggttcctggaagctgcttgaattattcagggcatgatgacagggctgatatcccatatg 1605 Query: 313 tccttggcgtactcgtggatcgtccggtcactgctgaacttgggggaacccgctgtgttg 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1604 tccttggcgtactcgtggatcgtccggtcactgctgaacttgggggaacccgctgtgttg 1545 Query: 373 aggatagacattcttgtccatagcttctgatctcggtatgcttcatcaactttttcctgg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1544 aggatagacattcttgtccatagcttctgatctcggtatgcttcatcaactttttcctgg 1485 Query: 433 cattcaatgtaactgggaaaatccttgccaacaagaaaataatctgcacgtccataacct 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1484 cattcaatgtaactgggaaaatccttgccaacaagaaaataatctgcacgtccataacct 1425 Query: 493 tcatttccttccaaagaacccattaattcatcatagttgctagtcccaaagacgccactg 552 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1424 tcatttccttccaaagaacccatcaattcatcatagttgctagtcccaaagacgccactg 1365 Query: 553 cggacgtattccttaacctcttcaaatctcaggtcaggcacaaactttccttcagctctc 612 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 1364 cggacgtattccttaacctcttcaaatctcgggtcaggcacaaactttccttcagccctc 1305 Query: 613 tcttgcctcaaac 625 ||||||||||||| Sbjct: 1304 tcttgcctcaaac 1292 Score = 192 bits (97), Expect = 1e-45 Identities = 164/184 (89%), Gaps = 3/184 (1%) Strand = Plus / Minus Query: 12 tacagatacaccaaagtttgtttgtttgatgattctgctccaacattattcggcgaaatt 71 ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 1909 tacagatacaccaaagtatgtttgtttgatgattctgctccaactttattcggcgaaata 1850 Query: 72 cgcacactataagcccgggtgacactggctaaccggcatgcaagtttgttaaagatgaac 131 | |||| ||||||| |||| | |||||| ||| | |||||||| ||| ||| ||||||| Sbjct: 1849 c--acaccataagcctgggt-atactggccaactgacatgcaagattgctaaggatgaac 1793 Query: 132 tatcctgcatgctctcagctctcaggttcatgtcagagcttgcatatgcctatacaaaac 191 || |||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||| Sbjct: 1792 taccctgcatgctctcagcactcaggtccatgccagaacttgcatatgcctatacaaaac 1733 Query: 192 tggg 195 |||| Sbjct: 1732 tggg 1729
>gb|AY357118.1| Triticum aestivum plastidic alpha 1,4-glucan phosphorylase mRNA, partial cds; nuclear gene for plastid product Length = 2834 Score = 684 bits (345), Expect = 0.0 Identities = 366/373 (98%) Strand = Plus / Minus Query: 253 aggttcctggaaactgcttgaattactcagggcatgatgacggggctgatatcccatatg 312 |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2540 aggttcctggaagctgcttgaattattcagggcatgatgacggggctgatatcccatatg 2481 Query: 313 tccttggcgtactcgtggatcgtccggtcactgctgaacttgggggaacccgctgtgttg 372 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2480 tccttggcgtactcatggatcgtccggtcactgctgaacttgggggaacccgctgtgttg 2421 Query: 373 aggatagacattcttgtccatagcttctgatctcggtatgcttcatcaactttttcctgg 432 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2420 aggatagacattcttgtccatagcttctgatctcggtatgcttcatcaactttttgctgg 2361 Query: 433 cattcaatgtaactgggaaaatccttgccaacaagaaaataatctgcacgtccataacct 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2360 cattcaatgtaactgggaaaatccttgccaacaagaaaataatctgcacgtccataacct 2301 Query: 493 tcatttccttccaaagaacccattaattcatcatagttgctagtcccaaagacgccactg 552 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2300 tcatttccttccaaagaacccatcaattcatcatagttgctagtcccaaagacgccactg 2241 Query: 553 cggacgtattccttaacctcttcaaatctcaggtcaggcacaaactttccttcagctctc 612 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 2240 cggacgtattccttaacctcttcaaatctcgggtcaggcacaaactttccttcagccctc 2181 Query: 613 tcttgcctcaaac 625 ||||||||||||| Sbjct: 2180 tcttgcctcaaac 2168 Score = 192 bits (97), Expect = 1e-45 Identities = 164/185 (88%), Gaps = 1/185 (0%) Strand = Plus / Minus Query: 12 tacagatacaccaaagtttgtttgtttgatgattctgctccaacatt-attcggcgaaat 70 ||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||| Sbjct: 2790 tacagatacaccaaagtatgtttgtttgatgattctgctccaacctttattcggcgaaat 2731 Query: 71 tcgcacactataagcccgggtgacactggctaaccggcatgcaagtttgttaaagatgaa 130 | ||||| ||||||| |||| | |||||| ||| | || ||||| ||| ||| ||| || Sbjct: 2730 acacacaccataagcctgggtaatactggccaactgacacgcaagattgctaaggattaa 2671 Query: 131 ctatcctgcatgctctcagctctcaggttcatgtcagagcttgcatatgcctatacaaaa 190 ||| |||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||| Sbjct: 2670 ctaccctgcatgctctcagcactcaggtccatgtcagaacttgcatatgcctatacaaaa 2611 Query: 191 ctggg 195 ||||| Sbjct: 2610 ctggg 2606
>gb|AY366476.1| Triticum aestivum plastidic alpha 1,4-glucan phosphorylase mRNA, partial cds Length = 2307 Score = 676 bits (341), Expect = 0.0 Identities = 365/373 (97%) Strand = Plus / Minus Query: 253 aggttcctggaaactgcttgaattactcagggcatgatgacggggctgatatcccatatg 312 |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2012 aggttcctggaagctgcttgaattattcagggcatgatgacggggctgatatcccatatg 1953 Query: 313 tccttggcgtactcgtggatcgtccggtcactgctgaacttgggggaacccgctgtgttg 372 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1952 tccttggcgtactcatggatcgtccggtcactgctgaacttgggggaacccgctgtgttg 1893 Query: 373 aggatagacattcttgtccatagcttctgatctcggtatgcttcatcaactttttcctgg 432 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1892 aggatagacattcttgtccatagcttctgatctcggtatgcttcatcaactttttgctgg 1833 Query: 433 cattcaatgtaactgggaaaatccttgccaacaagaaaataatctgcacgtccataacct 492 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1832 cattcaatgtaactgggaaaatccttgccaacaagaaaataatctgcacgcccataacct 1773 Query: 493 tcatttccttccaaagaacccattaattcatcatagttgctagtcccaaagacgccactg 552 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1772 tcatttccttccaaagaacccatcaattcatcatagttgctagtcccaaagacgccactg 1713 Query: 553 cggacgtattccttaacctcttcaaatctcaggtcaggcacaaactttccttcagctctc 612 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 1712 cggacgtattccttaacctcttcaaatctcgggtcaggcacaaactttccttcagccctc 1653 Query: 613 tcttgcctcaaac 625 ||||||||||||| Sbjct: 1652 tcttgcctcaaac 1640 Score = 190 bits (96), Expect = 4e-45 Identities = 162/184 (88%) Strand = Plus / Minus Query: 12 tacagatacaccaaagtttgtttgtttgatgattctgctccaacattattcggcgaaatt 71 ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct: 2261 tacagatacaccaaagtatgtttgtttgatgattctgctccaactttattcggcgaaata 2202 Query: 72 cgcacactataagcccgggtgacactggctaaccggcatgcaagtttgttaaagatgaac 131 | ||||| ||||||| |||| | |||||| ||| | | ||||| ||| ||| ||| ||| Sbjct: 2201 cacacaccataagcctgggtaatactggccaactgaaaagcaagattgctaaggattaac 2142 Query: 132 tatcctgcatgctctcagctctcaggttcatgtcagagcttgcatatgcctatacaaaac 191 || ||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||| Sbjct: 2141 tacactgcatgctctcagcactcaggtccatgtcagaacttgcatatgcctatacaaaac 2082 Query: 192 tggg 195 |||| Sbjct: 2081 tggg 2078
>gb|AY366474.1| Triticum aestivum plastidic alpha 1,4-glucan phosphorylase 2 mRNA, partial cds Length = 1683 Score = 668 bits (337), Expect = 0.0 Identities = 364/373 (97%) Strand = Plus / Minus Query: 253 aggttcctggaaactgcttgaattactcagggcatgatgacggggctgatatcccatatg 312 |||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 1400 aggttcctggaagctgcttgaattattcagggcatgatgacggggctgataccccatatg 1341 Query: 313 tccttggcgtactcgtggatcgtccggtcactgctgaacttgggggaacccgctgtgttg 372 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1340 tccttggcatactcgtggatcgtccggtcactgctgaacttgggggaacccgctgtgttg 1281 Query: 373 aggatagacattcttgtccatagcttctgatctcggtatgcttcatcaactttttcctgg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1280 aggatagacattcttgtccatagcttctgatctcggtatgcttcatcaactttttcctgg 1221 Query: 433 cattcaatgtaactgggaaaatccttgccaacaagaaaataatctgcacgtccataacct 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1220 cattcaatgtaactgggaaaatccttgccaacaagaaaataatctgcacgtccataacct 1161 Query: 493 tcatttccttccaaagaacccattaattcatcatagttgctagtcccaaagacgccactg 552 ||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||| Sbjct: 1160 tcatttccttccaaagaacccatcaattcatcatagttgccagtcccaaagatgccactg 1101 Query: 553 cggacgtattccttaacctcttcaaatctcaggtcaggcacaaactttccttcagctctc 612 |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| Sbjct: 1100 cggacgtattccttaacctcttcaaatctcgggtcaggcacaaacttcccttcagctctc 1041 Query: 613 tcttgcctcaaac 625 ||||||||||||| Sbjct: 1040 tcttgcctcaaac 1028 Score = 206 bits (104), Expect = 6e-50 Identities = 164/184 (89%) Strand = Plus / Minus Query: 12 tacagatacaccaaagtttgtttgtttgatgattctgctccaacattattcggcgaaatt 71 ||||||||||||||||| |||||||||||||| ||||||||||| |||||| ||||||| Sbjct: 1648 tacagatacaccaaagtatgtttgtttgatgactctgctccaactttattcagcgaaata 1589 Query: 72 cgcacactataagcccgggtgacactggctaaccggcatgcaagtttgttaaagatgaac 131 | ||||| ||||||| |||| | |||||||||| | ||||||| ||| ||| ||||||| Sbjct: 1588 cacacaccataagcctgggtaatactggctaactgacatgcaatattgctaaggatgaac 1529 Query: 132 tatcctgcatgctctcagctctcaggttcatgtcagagcttgcatatgcctatacaaaac 191 || |||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||| Sbjct: 1528 taccctgcatgctctcagcactcaggtccatgtcagaacttgcatatgcctatacaaaac 1469 Query: 192 tggg 195 |||| Sbjct: 1468 tggg 1465
>gb|BT018213.1| Zea mays clone EL01N0561A02.c mRNA sequence Length = 1470 Score = 355 bits (179), Expect = 1e-94 Identities = 293/331 (88%) Strand = Plus / Minus Query: 295 gggctgatatcccatatgtccttggcgtactcgtggatcgtccggtcactgctgaacttg 354 |||||||||||||| || |||||||||||||| || ||||||| || |||||||||||| Sbjct: 1129 gggctgatatcccagatatccttggcgtactcatgaatcgtcctatcgctgctgaacttg 1070 Query: 355 ggggaacccgctgtgttgaggatagacattcttgtccatagcttctgatctcggtatgct 414 | || || || ||||||||||||||||| |||||||||| ||||||||||||||| || Sbjct: 1069 gatgagccagccgtgttgaggatagacatccttgtccataacttctgatctcggtacgcc 1010 Query: 415 tcatcaactttttcctggcattcaatgtaactgggaaaatccttgccaacaagaaaataa 474 |||||||||||||| ||||||||||| || ||||| || |||||||||||||| |||||| Sbjct: 1009 tcatcaactttttcttggcattcaatatagctggggaagtccttgccaacaaggaaataa 950 Query: 475 tctgcacgtccataaccttcatttccttccaaagaacccattaattcatcatagttgcta 534 ||||||||||| ||||||||||||||||||||||||||||| |||||||||||| || | Sbjct: 949 tctgcacgtccgtaaccttcatttccttccaaagaacccatcaattcatcatagctgtaa 890 Query: 535 gtcccaaagacgccactgcggacgtattccttaacctcttcaaatctcaggtcaggcaca 594 ||||||||||| ||||||||||| ||||||||||||| |||||||| ||||||||||| Sbjct: 889 gtcccaaagacaccactgcggacaaattccttaacctcctcaaatcttgggtcaggcaca 830 Query: 595 aactttccttcagctctctcttgcctcaaac 625 |||||||| || ||||| |||| || ||||| Sbjct: 829 aactttccctcggctctttctttccgcaaac 799
>gb|AY106211.1| Zea mays PCO070449 mRNA sequence Length = 2149 Score = 355 bits (179), Expect = 1e-94 Identities = 293/331 (88%) Strand = Plus / Minus Query: 295 gggctgatatcccatatgtccttggcgtactcgtggatcgtccggtcactgctgaacttg 354 |||||||||||||| || |||||||||||||| || ||||||| || |||||||||||| Sbjct: 1775 gggctgatatcccagatatccttggcgtactcatgaatcgtcctatcgctgctgaacttg 1716 Query: 355 ggggaacccgctgtgttgaggatagacattcttgtccatagcttctgatctcggtatgct 414 | || || || ||||||||||||||||| |||||||||| ||||||||||||||| || Sbjct: 1715 gatgagccagccgtgttgaggatagacatccttgtccataacttctgatctcggtacgcc 1656 Query: 415 tcatcaactttttcctggcattcaatgtaactgggaaaatccttgccaacaagaaaataa 474 |||||||||||||| ||||||||||| || ||||| || |||||||||||||| |||||| Sbjct: 1655 tcatcaactttttcttggcattcaatatagctggggaagtccttgccaacaaggaaataa 1596 Query: 475 tctgcacgtccataaccttcatttccttccaaagaacccattaattcatcatagttgcta 534 ||||||||||| ||||||||||||||||||||||||||||| |||||||||||| || | Sbjct: 1595 tctgcacgtccgtaaccttcatttccttccaaagaacccatcaattcatcatagctgtaa 1536 Query: 535 gtcccaaagacgccactgcggacgtattccttaacctcttcaaatctcaggtcaggcaca 594 ||||||||||| ||||||||||| ||||||||||||| |||||||| ||||||||||| Sbjct: 1535 gtcccaaagacaccactgcggacaaattccttaacctcctcaaatcttgggtcaggcaca 1476 Query: 595 aactttccttcagctctctcttgcctcaaac 625 |||||||| || ||||| |||| || ||||| Sbjct: 1475 aactttccctcggctctttctttccgcaaac 1445
>ref|XM_469836.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3133 Score = 327 bits (165), Expect = 3e-86 Identities = 300/345 (86%) Strand = Plus / Minus Query: 281 agggcatgatgacggggctgatatcccatatgtccttggcgtactcgtggatcgtccggt 340 |||||| |||||| || |||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 2854 agggcaggatgacaggcttgatgtcccagatgtccttggcgtactcgtgaatcgtccggt 2795 Query: 341 cactgctgaacttgggggaacccgctgtgttgaggatagacattcttgtccatagcttct 400 | ||| ||||||||| ||||| |||||||||||||| ||||| ||||||||||| |||| Sbjct: 2794 cgctgttgaacttggaggaactggctgtgttgaggattgacatccttgtccatagtttct 2735 Query: 401 gatctcggtatgcttcatcaactttttcctggcattcaatgtaactgggaaaatccttgc 460 |||| |||||||||| |||||| || ||||||||||||||||| ||||| ||||| || | Sbjct: 2734 gatcgcggtatgctttatcaaccttctcctggcattcaatgtagctggggaaatctttac 2675 Query: 461 caacaagaaaataatctgcacgtccataaccttcatttccttccaaagaacccattaatt 520 ||||||||||||| |||||||| |||||||||||||||||||||| ||||||||| || | Sbjct: 2674 caacaagaaaatagtctgcacgcccataaccttcatttccttccagagaacccatcaagt 2615 Query: 521 catcatagttgctagtcccaaagacgccactgcggacgtattccttaacctcttcaaatc 580 |||| |||||| ||| |||||||| ||||||||||| || |||||||||||| |||| Sbjct: 2614 catcgtagttgtaagttccaaagaccccactgcggacaaatctcttaacctcttcgaatc 2555 Query: 581 tcaggtcaggcacaaactttccttcagctctctcttgcctcaaac 625 | ||||||||||||||||||| | |||||||||| ||| |||| Sbjct: 2554 ttgggtcaggcacaaactttccctgggctctctctttccttaaac 2510
>gb|AF327055.1|AF327055 Oryza sativa alpha 1,4-glucan phosphorylase L isozyme mRNA, partial cds Length = 3141 Score = 327 bits (165), Expect = 3e-86 Identities = 300/345 (86%) Strand = Plus / Minus Query: 281 agggcatgatgacggggctgatatcccatatgtccttggcgtactcgtggatcgtccggt 340 |||||| |||||| || |||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 2786 agggcaggatgacaggcttgatgtcccagatgtccttggcgtactcgtgaatcgtccggt 2727 Query: 341 cactgctgaacttgggggaacccgctgtgttgaggatagacattcttgtccatagcttct 400 | ||| ||||||||| ||||| |||||||||||||| ||||| ||||||||||| |||| Sbjct: 2726 cgctgttgaacttggaggaactggctgtgttgaggattgacatccttgtccatagtttct 2667 Query: 401 gatctcggtatgcttcatcaactttttcctggcattcaatgtaactgggaaaatccttgc 460 |||| |||||||||| |||||| || ||||||||||||||||| ||||| ||||| || | Sbjct: 2666 gatcgcggtatgctttatcaaccttctcctggcattcaatgtagctggggaaatctttac 2607 Query: 461 caacaagaaaataatctgcacgtccataaccttcatttccttccaaagaacccattaatt 520 ||||||||||||| |||||||| |||||||||||||||||||||| ||||||||| || | Sbjct: 2606 caacaagaaaatagtctgcacgcccataaccttcatttccttccagagaacccatcaagt 2547 Query: 521 catcatagttgctagtcccaaagacgccactgcggacgtattccttaacctcttcaaatc 580 |||| |||||| ||| |||||||| ||||||||||| || |||||||||||| |||| Sbjct: 2546 catcgtagttgtaagttccaaagaccccactgcggacaaatctcttaacctcttcgaatc 2487 Query: 581 tcaggtcaggcacaaactttccttcagctctctcttgcctcaaac 625 | ||||||||||||||||||| | |||||||||| ||| |||| Sbjct: 2486 ttgggtcaggcacaaactttccctgggctctctctttccttaaac 2442
>dbj|AK063766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B07, full insert sequence Length = 3049 Score = 327 bits (165), Expect = 3e-86 Identities = 300/345 (86%) Strand = Plus / Minus Query: 281 agggcatgatgacggggctgatatcccatatgtccttggcgtactcgtggatcgtccggt 340 |||||| |||||| || |||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 2684 agggcaggatgacaggcttgatgtcccagatgtccttggcgtactcgtgaatcgtccggt 2625 Query: 341 cactgctgaacttgggggaacccgctgtgttgaggatagacattcttgtccatagcttct 400 | ||| ||||||||| ||||| |||||||||||||| ||||| ||||||||||| |||| Sbjct: 2624 cgctgttgaacttggaggaactggctgtgttgaggattgacatccttgtccatagtttct 2565 Query: 401 gatctcggtatgcttcatcaactttttcctggcattcaatgtaactgggaaaatccttgc 460 |||| |||||||||| |||||| || ||||||||||||||||| ||||| ||||| || | Sbjct: 2564 gatcgcggtatgctttatcaaccttctcctggcattcaatgtagctggggaaatctttac 2505 Query: 461 caacaagaaaataatctgcacgtccataaccttcatttccttccaaagaacccattaatt 520 ||||||||||||| |||||||| |||||||||||||||||||||| ||||||||| || | Sbjct: 2504 caacaagaaaatagtctgcacgcccataaccttcatttccttccagagaacccatcaagt 2445 Query: 521 catcatagttgctagtcccaaagacgccactgcggacgtattccttaacctcttcaaatc 580 |||| |||||| ||| |||||||| ||||||||||| || |||||||||||| |||| Sbjct: 2444 catcgtagttgtaagttccaaagaccccactgcggacaaatctcttaacctcttcgaatc 2385 Query: 581 tcaggtcaggcacaaactttccttcagctctctcttgcctcaaac 625 | ||||||||||||||||||| | |||||||||| ||| |||| Sbjct: 2384 ttgggtcaggcacaaactttccctgggctctctctttccttaaac 2340
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 202 bits (102), Expect = 1e-48 Identities = 177/202 (87%) Strand = Plus / Plus Query: 397 ttctgatctcggtatgcttcatcaactttttcctggcattcaatgtaactgggaaaatcc 456 |||||||| |||||||||| |||||| || ||||||||||||||||| ||||| ||||| Sbjct: 31029178 ttctgatcgcggtatgctttatcaaccttctcctggcattcaatgtagctggggaaatct 31029237 Query: 457 ttgccaacaagaaaataatctgcacgtccataaccttcatttccttccaaagaacccatt 516 || |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||| Sbjct: 31029238 ttaccaacaagaaaatagtctgcacgcccataaccttcatttccttccagagaacccatc 31029297 Query: 517 aattcatcatagttgctagtcccaaagacgccactgcggacgtattccttaacctcttca 576 || ||||| |||||| ||| |||||||| ||||||||||| || |||||||||||| Sbjct: 31029298 aagtcatcgtagttgtaagttccaaagaccccactgcggacaaatctcttaacctcttcg 31029357 Query: 577 aatctcaggtcaggcacaaact 598 ||||| ||||||||||||||| Sbjct: 31029358 aatcttgggtcaggcacaaact 31029379 Score = 121 bits (61), Expect = 3e-24 Identities = 103/117 (88%) Strand = Plus / Plus Query: 281 agggcatgatgacggggctgatatcccatatgtccttggcgtactcgtggatcgtccggt 340 |||||| |||||| || |||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 31028476 agggcaggatgacaggcttgatgtcccagatgtccttggcgtactcgtgaatcgtccggt 31028535 Query: 341 cactgctgaacttgggggaacccgctgtgttgaggatagacattcttgtccatagct 397 | ||| ||||||||| ||||| |||||||||||||| ||||| ||||||||||||| Sbjct: 31028536 cgctgttgaacttggaggaactggctgtgttgaggattgacatccttgtccatagct 31028592 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 578 atctcaggtcaggcacaaac 597 |||||||||||||||||||| Sbjct: 9427454 atctcaggtcaggcacaaac 9427473
>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01 genomic sequence, complete sequence Length = 168759 Score = 202 bits (102), Expect = 1e-48 Identities = 177/202 (87%) Strand = Plus / Minus Query: 397 ttctgatctcggtatgcttcatcaactttttcctggcattcaatgtaactgggaaaatcc 456 |||||||| |||||||||| |||||| || ||||||||||||||||| ||||| ||||| Sbjct: 66886 ttctgatcgcggtatgctttatcaaccttctcctggcattcaatgtagctggggaaatct 66827 Query: 457 ttgccaacaagaaaataatctgcacgtccataaccttcatttccttccaaagaacccatt 516 || |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||| Sbjct: 66826 ttaccaacaagaaaatagtctgcacgcccataaccttcatttccttccagagaacccatc 66767 Query: 517 aattcatcatagttgctagtcccaaagacgccactgcggacgtattccttaacctcttca 576 || ||||| |||||| ||| |||||||| ||||||||||| || |||||||||||| Sbjct: 66766 aagtcatcgtagttgtaagttccaaagaccccactgcggacaaatctcttaacctcttcg 66707 Query: 577 aatctcaggtcaggcacaaact 598 ||||| ||||||||||||||| Sbjct: 66706 aatcttgggtcaggcacaaact 66685 Score = 121 bits (61), Expect = 3e-24 Identities = 103/117 (88%) Strand = Plus / Minus Query: 281 agggcatgatgacggggctgatatcccatatgtccttggcgtactcgtggatcgtccggt 340 |||||| |||||| || |||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 67588 agggcaggatgacaggcttgatgtcccagatgtccttggcgtactcgtgaatcgtccggt 67529 Query: 341 cactgctgaacttgggggaacccgctgtgttgaggatagacattcttgtccatagct 397 | ||| ||||||||| ||||| |||||||||||||| ||||| ||||||||||||| Sbjct: 67528 cgctgttgaacttggaggaactggctgtgttgaggattgacatccttgtccatagct 67472
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 202 bits (102), Expect = 1e-48 Identities = 177/202 (87%) Strand = Plus / Plus Query: 397 ttctgatctcggtatgcttcatcaactttttcctggcattcaatgtaactgggaaaatcc 456 |||||||| |||||||||| |||||| || ||||||||||||||||| ||||| ||||| Sbjct: 31119701 ttctgatcgcggtatgctttatcaaccttctcctggcattcaatgtagctggggaaatct 31119760 Query: 457 ttgccaacaagaaaataatctgcacgtccataaccttcatttccttccaaagaacccatt 516 || |||||||||||||| |||||||| |||||||||||||||||||||| ||||||||| Sbjct: 31119761 ttaccaacaagaaaatagtctgcacgcccataaccttcatttccttccagagaacccatc 31119820 Query: 517 aattcatcatagttgctagtcccaaagacgccactgcggacgtattccttaacctcttca 576 || ||||| |||||| ||| |||||||| ||||||||||| || |||||||||||| Sbjct: 31119821 aagtcatcgtagttgtaagttccaaagaccccactgcggacaaatctcttaacctcttcg 31119880 Query: 577 aatctcaggtcaggcacaaact 598 ||||| ||||||||||||||| Sbjct: 31119881 aatcttgggtcaggcacaaact 31119902 Score = 121 bits (61), Expect = 3e-24 Identities = 103/117 (88%) Strand = Plus / Plus Query: 281 agggcatgatgacggggctgatatcccatatgtccttggcgtactcgtggatcgtccggt 340 |||||| |||||| || |||| ||||| |||||||||||||||||||| |||||||||| Sbjct: 31118999 agggcaggatgacaggcttgatgtcccagatgtccttggcgtactcgtgaatcgtccggt 31119058 Query: 341 cactgctgaacttgggggaacccgctgtgttgaggatagacattcttgtccatagct 397 | ||| ||||||||| ||||| |||||||||||||| ||||| ||||||||||||| Sbjct: 31119059 cgctgttgaacttggaggaactggctgtgttgaggattgacatccttgtccatagct 31119115 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 578 atctcaggtcaggcacaaac 597 |||||||||||||||||||| Sbjct: 9425575 atctcaggtcaggcacaaac 9425594
>ref|NM_113857.2| Arabidopsis thaliana phosphorylase/ transferase, transferring glycosyl groups AT3G29320 mRNA, complete cds Length = 3165 Score = 167 bits (84), Expect = 5e-38 Identities = 192/228 (84%) Strand = Plus / Minus Query: 301 atatcccatatgtccttggcgtactcgtggatcgtccggtcactgctgaacttgggggaa 360 |||| ||||||||| |||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 2916 atattccatatgtctttggcgtattcgtggatcgtccggtcactgctaaacttgaatgaa 2857 Query: 361 cccgctgtgttgaggatagacattcttgtccatagcttctgatctcggtatgcttcatca 420 || |||||||| | || |||||||| |||||| ||||| ||||||||||| || || Sbjct: 2856 cctgctgtgttcattattgacattctcgtccatcttttctggtctcggtatgcctcgtcg 2797 Query: 421 actttttcctggcattcaatgtaactgggaaaatccttgccaacaagaaaataatctgca 480 |||||||| |||||||| |||||||| ||||| || |||||||| || || ||||| || Sbjct: 2796 actttttcttggcattcgatgtaactaggaaagtctttgccaactaggaagtaatccgct 2737 Query: 481 cgtccataaccttcatttccttccaaagaacccattaattcatcatag 528 |||||| | ||||| |||||||||||||| || |||| |||||||||| Sbjct: 2736 cgtccaaagccttcgtttccttccaaagagccgattagttcatcatag 2689
>dbj|AK221378.1| Arabidopsis thaliana mRNA for alpha-glucan phosphorylase, partial cds, clone: RAFL25-38-C05 Length = 594 Score = 167 bits (84), Expect = 5e-38 Identities = 192/228 (84%) Strand = Plus / Minus Query: 301 atatcccatatgtccttggcgtactcgtggatcgtccggtcactgctgaacttgggggaa 360 |||| ||||||||| |||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 426 atattccatatgtctttggcgtattcgtggatcgtccggtcactgctaaacttgaatgaa 367 Query: 361 cccgctgtgttgaggatagacattcttgtccatagcttctgatctcggtatgcttcatca 420 || |||||||| | || |||||||| |||||| ||||| ||||||||||| || || Sbjct: 366 cctgctgtgttcattattgacattctcgtccatcttttctggtctcggtatgcctcgtcg 307 Query: 421 actttttcctggcattcaatgtaactgggaaaatccttgccaacaagaaaataatctgca 480 |||||||| |||||||| |||||||| ||||| || |||||||| || || ||||| || Sbjct: 306 actttttcttggcattcgatgtaactaggaaagtctttgccaactaggaagtaatccgct 247 Query: 481 cgtccataaccttcatttccttccaaagaacccattaattcatcatag 528 |||||| | ||||| |||||||||||||| || |||| |||||||||| Sbjct: 246 cgtccaaagccttcgtttccttccaaagagccgattagttcatcatag 199
>gb|AY049235.1| Arabidopsis thaliana AT3g29320/MUO10_2 mRNA, complete cds Length = 3114 Score = 167 bits (84), Expect = 5e-38 Identities = 192/228 (84%) Strand = Plus / Minus Query: 301 atatcccatatgtccttggcgtactcgtggatcgtccggtcactgctgaacttgggggaa 360 |||| ||||||||| |||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 2916 atattccatatgtctttggcgtattcgtggatcgtccggtcactgctaaacttgaatgaa 2857 Query: 361 cccgctgtgttgaggatagacattcttgtccatagcttctgatctcggtatgcttcatca 420 || |||||||| | || |||||||| |||||| ||||| ||||||||||| || || Sbjct: 2856 cctgctgtgttcattattgacattctcgtccatcttttctggtctcggtatgcctcgtcg 2797 Query: 421 actttttcctggcattcaatgtaactgggaaaatccttgccaacaagaaaataatctgca 480 |||||||| |||||||| |||||||| ||||| || |||||||| || || ||||| || Sbjct: 2796 actttttcttggcattcgatgtaactaggaaagtctttgccaactaggaagtaatccgct 2737 Query: 481 cgtccataaccttcatttccttccaaagaacccattaattcatcatag 528 |||||| | ||||| |||||||||||||| || |||| |||||||||| Sbjct: 2736 cgtccaaagccttcgtttccttccaaagagccgattagttcatcatag 2689
>gb|BT003015.1| Arabidopsis thaliana At3g29320/MUO10_2 gene, complete cds Length = 2889 Score = 167 bits (84), Expect = 5e-38 Identities = 192/228 (84%) Strand = Plus / Minus Query: 301 atatcccatatgtccttggcgtactcgtggatcgtccggtcactgctgaacttgggggaa 360 |||| ||||||||| |||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 2867 atattccatatgtctttggcgtattcgtggatcgtccggtcactgctaaacttgaatgaa 2808 Query: 361 cccgctgtgttgaggatagacattcttgtccatagcttctgatctcggtatgcttcatca 420 || |||||||| | || |||||||| |||||| ||||| ||||||||||| || || Sbjct: 2807 cctgctgtgttcattattgacattctcgtccatcttttctggtctcggtatgcctcgtcg 2748 Query: 421 actttttcctggcattcaatgtaactgggaaaatccttgccaacaagaaaataatctgca 480 |||||||| |||||||| |||||||| ||||| || |||||||| || || ||||| || Sbjct: 2747 actttttcttggcattcgatgtaactaggaaagtctttgccaactaggaagtaatccgct 2688 Query: 481 cgtccataaccttcatttccttccaaagaacccattaattcatcatag 528 |||||| | ||||| |||||||||||||| || |||| |||||||||| Sbjct: 2687 cgtccaaagccttcgtttccttccaaagagccgattagttcatcatag 2640
>emb|X52385.1|STSTARCH Potato mRNA for starch phosphorylase Length = 4942 Score = 113 bits (57), Expect = 7e-22 Identities = 180/221 (81%) Strand = Plus / Minus Query: 310 atgtccttggcgtactcgtggatcgtccggtcactgctgaacttgggggaacccgctgtg 369 ||||| ||||| || || ||||| || | |||||||||||||||| || |||||||| Sbjct: 4772 atgtctttggcatattcatggattgttctgtcactgctgaacttgtacgatcccgctgta 4713 Query: 370 ttgaggatagacattcttgtccatagcttctgatctcggtatgcttcatcaactttttcc 429 || | ||| ||||| ||||||| ||||| || || ||||| ||||||||||| || Sbjct: 4712 ttcaagattgacatcgttgtccaccttttctggtcgcgatatgcctcatcaactttctct 4653 Query: 430 tggcattcaatgtaactgggaaaatccttgccaacaagaaaataatctgcacgtccataa 489 |||||||| ||||||||||| || |||||||| ||||| ||||| || ||||| ||| || Sbjct: 4652 tggcattctatgtaactggggaagtccttgcccacaaggaaatagtcagcacggccaaaa 4593 Query: 490 ccttcatttccttccaaagaacccattaattcatcatagtt 530 ||||||||||||||||| || || |||| ||||||||||| Sbjct: 4592 ccttcatttccttccaacgatccaattaggtcatcatagtt 4552
>dbj|D00520.1|POTGP Solanum tuberosum mRNA for alpha-glucan phosphorylase precursor, complete cds Length = 3101 Score = 113 bits (57), Expect = 7e-22 Identities = 180/221 (81%) Strand = Plus / Minus Query: 310 atgtccttggcgtactcgtggatcgtccggtcactgctgaacttgggggaacccgctgtg 369 ||||| ||||| || || ||||| || | |||||||||||||||| || |||||||| Sbjct: 2913 atgtctttggcatattcatggattgttctgtcactgctgaacttgtacgatcccgctgta 2854 Query: 370 ttgaggatagacattcttgtccatagcttctgatctcggtatgcttcatcaactttttcc 429 || | ||| ||||| ||||||| ||||| || || ||||| ||||||||||| || Sbjct: 2853 ttcaagattgacatcgttgtccaccttttctggtcgcgatatgcctcatcaactttctct 2794 Query: 430 tggcattcaatgtaactgggaaaatccttgccaacaagaaaataatctgcacgtccataa 489 |||||||| ||||||||||| || |||||||| ||||| ||||| || ||||| ||| || Sbjct: 2793 tggcattctatgtaactggggaagtccttgcccacaaggaaatagtcagcacggccaaaa 2734 Query: 490 ccttcatttccttccaaagaacccattaattcatcatagtt 530 ||||||||||||||||| || || |||| ||||||||||| Sbjct: 2733 ccttcatttccttccaacgatccaattaggtcatcatagtt 2693
>emb|X73684.1|STSTP1 S.tuberosum mRNA for leaf type L starch phosphorylase Length = 3171 Score = 105 bits (53), Expect = 2e-19 Identities = 152/185 (82%) Strand = Plus / Minus Query: 364 gctgtgttgaggatagacattcttgtccatagcttctgatctcggtatgcttcatcaact 423 |||||||| | ||| |||||| | |||||| |||||| ||||| ||||||||||||||| Sbjct: 2926 gctgtgtttaagatcgacattttggtccatttcttctggtctcgatatgcttcatcaact 2867 Query: 424 ttttcctggcattcaatgtaactgggaaaatccttgccaacaagaaaataatctgcacgt 483 || || ||||| || || ||| ||| |||||||| || ||||||||||| || ||||| Sbjct: 2866 ttatcttggcactctatataatcggggaaatcctttcctacaagaaaatagtcagcacga 2807 Query: 484 ccataaccttcatttccttccaaagaacccattaattcatcatagttgctagtcccaaag 543 ||||| ||||| ||||||||||| || ||||| | ||| ||||||||| || |||||| Sbjct: 2806 ccatagccttcgtttccttccaaggatcccatgagttcttcatagttgtaggtgccaaag 2747 Query: 544 acgcc 548 ||||| Sbjct: 2746 acgcc 2742
>dbj|AP001309.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MUO10 Length = 77589 Score = 103 bits (52), Expect = 7e-19 Identities = 112/132 (84%) Strand = Plus / Minus Query: 397 ttctgatctcggtatgcttcatcaactttttcctggcattcaatgtaactgggaaaatcc 456 ||||| ||||||||||| || || |||||||| |||||||| |||||||| ||||| || Sbjct: 7006 ttctggtctcggtatgcctcgtcgactttttcttggcattcgatgtaactaggaaagtct 6947 Query: 457 ttgccaacaagaaaataatctgcacgtccataaccttcatttccttccaaagaacccatt 516 |||||||| || || ||||| || |||||| | ||||| |||||||||||||| || ||| Sbjct: 6946 ttgccaactaggaagtaatccgctcgtccaaagccttcgtttccttccaaagagccgatt 6887 Query: 517 aattcatcatag 528 | |||||||||| Sbjct: 6886 agttcatcatag 6875 Score = 81.8 bits (41), Expect = 3e-12 Identities = 80/93 (86%) Strand = Plus / Minus Query: 301 atatcccatatgtccttggcgtactcgtggatcgtccggtcactgctgaacttgggggaa 360 |||| ||||||||| |||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 7206 atattccatatgtctttggcgtattcgtggatcgtccggtcactgctaaacttgaatgaa 7147 Query: 361 cccgctgtgttgaggatagacattcttgtccat 393 || |||||||| | || |||||||| |||||| Sbjct: 7146 cctgctgtgttcattattgacattctcgtccat 7114
>gb|M64362.1|IPBSPP Sweet potato starch phosphorylase mRNA, complete cds Length = 3292 Score = 99.6 bits (50), Expect = 1e-17 Identities = 122/146 (83%) Strand = Plus / Minus Query: 364 gctgtgttgaggatagacattcttgtccatagcttctgatctcggtatgcttcatcaact 423 |||||||| | ||| |||||||| ||||||| ||| || ||||| ||||| |||||||| Sbjct: 2868 gctgtgttcaagattgacattctagtccatatcttttggtctcgatatgcctcatcaacc 2809 Query: 424 ttttcctggcattcaatgtaactgggaaaatccttgccaacaagaaaataatctgcacgt 483 || || |||||||| |||||||| || || |||||||| ||||| ||||| ||| |||| Sbjct: 2808 ttctcttggcattctatgtaactagggaagtccttgcccacaaggaaatagtctccacga 2749 Query: 484 ccataaccttcatttccttccaaaga 509 ||| | ||||||||||| |||||||| Sbjct: 2748 ccaaagccttcatttccctccaaaga 2723
>emb|X85181.1|SOSTPII S.oleracea mRNA for alpha-glucan phosphorylase Length = 3088 Score = 85.7 bits (43), Expect = 2e-13 Identities = 145/179 (81%) Strand = Plus / Minus Query: 331 atcgtccggtcactgctgaacttgggggaacccgctgtgttgaggatagacattcttgtc 390 ||||| ||||| ||||| |||||| ||||| ||||| || ||||| |||||||||||| Sbjct: 2920 atcgttcggtcgctgctaaacttgaatgaaccagctgtatttaggattgacattcttgtc 2861 Query: 391 catagcttctgatctcggtatgcttcatcaactttttcctggcattcaatgtaactggga 450 ||| || ||||||| ||||||| ||||||| ||| |||||||| | ||||| || Sbjct: 2860 catttctgttgatctctatatgcttggtcaacttgttcttggcattctacataactaggg 2801 Query: 451 aaatccttgccaacaagaaaataatctgcacgtccataaccttcatttccttccaaaga 509 || || ||||| ||||| |||||||| ||||||||| | ||||||||||| || ||||| Sbjct: 2800 aagtctttgcccacaaggaaataatcagcacgtccaaatccttcatttccctctaaaga 2742
>gb|L25626.1|IPBSTAPHOA Ipomoea batatas starch phosphorylase gene, complete cds Length = 6594 Score = 77.8 bits (39), Expect = 4e-11 Identities = 90/107 (84%) Strand = Plus / Minus Query: 403 tctcggtatgcttcatcaactttttcctggcattcaatgtaactgggaaaatccttgcca 462 ||||| ||||| |||||||| || || |||||||| |||||||| || || |||||||| Sbjct: 6013 tctcgatatgcctcatcaaccttctcttggcattctatgtaactagggaagtccttgccc 5954 Query: 463 acaagaaaataatctgcacgtccataaccttcatttccttccaaaga 509 ||||| ||||| ||| |||| ||| | ||||||||||| |||||||| Sbjct: 5953 acaaggaaatagtctccacgaccaaagccttcatttccctccaaaga 5907
>emb|Z36880.1|VFALGLPH Vicia faba var. minor mRNA for alpha 1,4-glucan phosphorylase L isoform precursor (VfPho1 gene) Length = 3283 Score = 75.8 bits (38), Expect = 2e-10 Identities = 83/98 (84%) Strand = Plus / Minus Query: 454 tccttgccaacaagaaaataatctgcacgtccataaccttcatttccttccaaagaaccc 513 |||| ||| ||||||||||||||||| || ||| |||||||||||||||| || || || Sbjct: 2894 tcctggcccacaagaaaataatctgctcgaccaaaaccttcatttccttctaaggatcca 2835 Query: 514 attaattcatcatagttgctagtcccaaagacgccact 551 || | ||||||||||||| || ||||||||| ||||| Sbjct: 2834 atcagttcatcatagttgtaagacccaaagacaccact 2797
>emb|AJ538738.1|NTA538738 Nicotiana tabacum cDNA-AFLP-fragment BC4-M43-030 Length = 242 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 409 tatgcttcatcaactttttcctggcattcaatgtaactgggaaaatccttgccaacaaga 468 ||||| ||||||||||| || ||||||||||| ||||||||||| |||||||| ||||| Sbjct: 70 tatgcctcatcaactttctcttggcattcaatataactgggaaagtccttgcccacaagg 11 Query: 469 aaata 473 ||||| Sbjct: 10 aaata 6
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 319 gcgtactcgtggatcgtccggtc 341 ||||||||||||||||||||||| Sbjct: 1005245 gcgtactcgtggatcgtccggtc 1005223
>gb|AC154258.2| Mus musculus BAC clone RP24-216P24 from chromosome 16, complete sequence Length = 151118 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 36 tttgatgattctgctccaacat 57 |||||||||||||||||||||| Sbjct: 58244 tttgatgattctgctccaacat 58223
>gb|AC009251.6|AC009251 Drosophila melanogaster, chromosome 2L, region 36D-36D, BAC clone BACR48K02, complete sequence Length = 178530 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 gtttgtttgtttgatgattctg 48 |||||||||||||||||||||| Sbjct: 79325 gtttgtttgtttgatgattctg 79304
>gb|AE003655.3| Drosophila melanogaster chromosome 2L, section 64 of 83 of the complete sequence Length = 253771 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 27 gtttgtttgtttgatgattctg 48 |||||||||||||||||||||| Sbjct: 206950 gtttgtttgtttgatgattctg 206929
>emb|Z98256.1|HS309I22 Human DNA sequence from clone RP1-309I22 on chromosome 22q12.1-13.2 Contains the 3' end of the TIMP3 gene for tissue inhibitor of metalloproteinase 3 (Sorsby fundus dystrophy, pseudoinflammatory), a novel pseudogene, a pseudogene similar to part of Cytochrome B and part of the SYN3 gene for Synapsin III, complete sequence Length = 97684 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 603 ttcagctctctcttgcctcaa 623 ||||||||||||||||||||| Sbjct: 54093 ttcagctctctcttgcctcaa 54073
>gb|AC175467.3| Pan troglodytes BAC clone CH251-302C22 from chromosome unknown, complete sequence Length = 186532 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 603 ttcagctctctcttgcctcaa 623 ||||||||||||||||||||| Sbjct: 5088 ttcagctctctcttgcctcaa 5068
>gb|AC183302.2| Pan troglodytes BAC clone CH251-258O5 from chromosome unknown, complete sequence Length = 211208 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 603 ttcagctctctcttgcctcaa 623 ||||||||||||||||||||| Sbjct: 95422 ttcagctctctcttgcctcaa 95442
>gb|AC004625.3| Arabidopsis thaliana chromosome 2 clone T26J13 map CIC11C08, complete sequence Length = 42499 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 509 aacccattaattcatcatagt 529 ||||||||||||||||||||| Sbjct: 32148 aacccattaattcatcatagt 32128
>gb|AC068196.4| Homo sapiens BAC clone RP11-685J19 from 2, complete sequence Length = 162566 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 564 cttaacctcttcaaatctcag 584 ||||||||||||||||||||| Sbjct: 107660 cttaacctcttcaaatctcag 107680
>gb|AC118696.14| Mus musculus chromosome 3, clone RP24-62O16, complete sequence Length = 190616 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 ctctcactgaggagtgaggc 227 |||||||||||||||||||| Sbjct: 93530 ctctcactgaggagtgaggc 93549
>ref|XM_614856.2| PREDICTED: Bos taurus similar to Protein KIAA0406, transcript variant 1 (LOC534917), mRNA Length = 3879 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 ttcatttccttccaaagaac 511 |||||||||||||||||||| Sbjct: 3844 ttcatttccttccaaagaac 3825
>ref|XM_882297.1| PREDICTED: Bos taurus similar to Protein KIAA0406, transcript variant 3 (LOC534917), mRNA Length = 3674 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 ttcatttccttccaaagaac 511 |||||||||||||||||||| Sbjct: 3639 ttcatttccttccaaagaac 3620
>ref|XM_882284.1| PREDICTED: Bos taurus similar to Protein KIAA0406, transcript variant 2 (LOC534917), mRNA Length = 1634 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 ttcatttccttccaaagaac 511 |||||||||||||||||||| Sbjct: 1599 ttcatttccttccaaagaac 1580
>gb|AC149571.3| Rhinolophus ferrumequinum clone VMRC7-305L23, complete sequence Length = 190426 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 tgaggatagacattcttgtc 390 |||||||||||||||||||| Sbjct: 53807 tgaggatagacattcttgtc 53826
>emb|AL359532.26| Human DNA sequence from clone RP11-330O11 on chromosome 10 Contains the 3' end of the gene for a novel protein (LOC220929) (FLJ32761), a DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 10 (RNA helicase) (DDH10) pseudogene and a CpG island, complete sequence Length = 179798 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 597 ctttccttcagctctctctt 616 |||||||||||||||||||| Sbjct: 12147 ctttccttcagctctctctt 12166
>emb|AL596110.15| Mouse DNA sequence from clone RP23-330N10 on chromosome 11 Contains the 3' end of a variant of the gene for a novel protein similar to human sperm antigen HCMOGT-1 (B230396K10Rik), the Adora2b gene for adenosine A2b receptor, the gene for a novel protein (2410012H22Rik), a somatic cytochrome c (Cycs) pseudogene, a novel gene, a novel pseudogene, the gene for a novel protein (2810460C24Rik), the 3' end of the Ncor1 gene for nuclear receptor co-repressor 1 and two CpG islands, complete sequence Length = 214834 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 gaggttcctggaaactgctt 271 |||||||||||||||||||| Sbjct: 90047 gaggttcctggaaactgctt 90066
>gb|AC120193.4| Homo sapiens chromosome 8, clone RP11-10H17, complete sequence Length = 174556 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 215 tgaggagtgaggcaaatctgtgac 238 |||||||||||||||| ||||||| Sbjct: 136079 tgaggagtgaggcaaagctgtgac 136102
>gb|AC100826.2| Homo sapiens chromosome 15, clone RP11-279F6, complete sequence Length = 168512 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 gctctcagctctcaggttca 161 |||||||||||||||||||| Sbjct: 5906 gctctcagctctcaggttca 5887
>dbj|AK095149.1| Homo sapiens cDNA FLJ37830 fis, clone BRSSN2009395 Length = 1782 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 377 tagacattcttgtccatagcttct 400 ||||| |||||||||||||||||| Sbjct: 651 tagacgttcttgtccatagcttct 628
>gb|AC105270.2| Homo sapiens chromosome 1 clone RP4-684L20, complete sequence Length = 158043 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 490 ccttcatttccttccaaaga 509 |||||||||||||||||||| Sbjct: 106290 ccttcatttccttccaaaga 106309
>gb|AC026337.29| Homo sapiens 2 BAC RP11-105E24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 171004 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 561 ttccttaacctcttcaaatctcag 584 |||||||||||||| ||||||||| Sbjct: 128220 ttccttaacctctttaaatctcag 128197
>gb|AC027237.8| Homo sapiens chromosome 15, clone RP11-253M7, complete sequence Length = 157448 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 gctctcagctctcaggttca 161 |||||||||||||||||||| Sbjct: 21291 gctctcagctctcaggttca 21310
>gb|AC024958.8| Homo sapiens, clone RP11-561E1, complete sequence Length = 190534 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 215 tgaggagtgaggcaaatctgtgac 238 |||||||||||||||| ||||||| Sbjct: 122824 tgaggagtgaggcaaagctgtgac 122801
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 578 atctcaggtcaggcacaaac 597 |||||||||||||||||||| Sbjct: 124854 atctcaggtcaggcacaaac 124873
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 gcatgcaagtttgttaaaga 126 |||||||||||||||||||| Sbjct: 6992203 gcatgcaagtttgttaaaga 6992222
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 578 atctcaggtcaggcacaaac 597 |||||||||||||||||||| Sbjct: 9833130 atctcaggtcaggcacaaac 9833149
>gb|AY211268.1| Chlamydomonas sp. W80 zeaxanthin epoxidase precursor (ZEP1) mRNA, complete cds; nuclear gene for chloroplast product Length = 2537 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 462 aacaagaaaataatctgcac 481 |||||||||||||||||||| Sbjct: 2478 aacaagaaaataatctgcac 2459
>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold Length = 1756392 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 tgaggatagacattcttgtc 390 |||||||||||||||||||| Sbjct: 669651 tgaggatagacattcttgtc 669670
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 tggcgtactcgtggatcgtc 336 |||||||||||||||||||| Sbjct: 5039098 tggcgtactcgtggatcgtc 5039117
>gb|AC079395.6| Homo sapiens BAC clone RP11-219H23 from 2, complete sequence Length = 82827 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 ccgctgtgttgaggatagac 381 |||||||||||||||||||| Sbjct: 21576 ccgctgtgttgaggatagac 21557
>gb|AC018678.9| Homo sapiens BAC clone RP11-279E17 from 2, complete sequence Length = 169991 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 561 ttccttaacctcttcaaatctcag 584 |||||||||||||| ||||||||| Sbjct: 168448 ttccttaacctctttaaatctcag 168425
>gb|AC140052.4| Mus musculus BAC clone RP23-346E11 from chromosome 15, complete sequence Length = 210091 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 agtttgtttgtttgatgatt 45 |||||||||||||||||||| Sbjct: 125519 agtttgtttgtttgatgatt 125500
>dbj|AP005839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0044K01 Length = 160643 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 gcatgcaagtttgttaaaga 126 |||||||||||||||||||| Sbjct: 63374 gcatgcaagtttgttaaaga 63393
>dbj|AP005095.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1063H10 Length = 170453 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 578 atctcaggtcaggcacaaac 597 |||||||||||||||||||| Sbjct: 97062 atctcaggtcaggcacaaac 97081
>gb|AC024558.21| Homo sapiens 3 BAC RP11-390G14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 216161 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 377 tagacattcttgtccatagcttct 400 ||||| |||||||||||||||||| Sbjct: 12885 tagacgttcttgtccatagcttct 12908
>emb|AL772179.17| Mouse DNA sequence from clone RP23-100B18 on chromosome 2, complete sequence Length = 194065 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 tttgtttgatgattctgctc 51 |||||||||||||||||||| Sbjct: 91167 tttgtttgatgattctgctc 91148 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,685,169 Number of Sequences: 3902068 Number of extensions: 6685169 Number of successful extensions: 132169 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 63 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 131805 Number of HSP's gapped (non-prelim): 360 length of query: 625 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 602 effective length of database: 17,143,297,704 effective search space: 10320265217808 effective search space used: 10320265217808 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)