ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags15k06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome... 98 5e-17
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 98 5e-17
3gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 98 5e-17
4gb|AC136842.2| Oryza sativa (japonica cultivar-group) chromosome... 68 4e-08
5gb|AC144700.2| Oryza sativa (japonica cultivar-group) chromosome... 62 3e-06
6gb|AC114828.2| Oryza sativa (japonica cultivar-group) chromosome... 62 3e-06
7ref|XM_723252.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 46 0.15
8gb|BC046682.1| Xenopus laevis, clone IMAGE:5542071, mRNA 46 0.15
9gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 44 0.59
10emb|AL137793.16| Human DNA sequence from clone RP5-1065P14 on ch... 44 0.59
11gb|CP000249.1| Frankia sp. CcI3, complete genome 44 0.59
12gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1... 44 0.59
13gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome 42 2.3
14gb|AC158552.5| Mus musculus chromosome 3, clone RP23-97D22, comp... 42 2.3
15gb|AY615960.1| Trichinella spiralis adenosine deaminase mRNA, co... 42 2.3
16gb|DQ480524.1| Hepatitis C virus subtype 6a strain 6a74, complet... 42 2.3
17gb|AC122913.4| Mus musculus BAC clone RP23-25J21 from 3, complet... 42 2.3
18gb|AC121847.2| Mus musculus BAC clone RP24-86M13 from 3, complet... 42 2.3
19gb|AC154303.2| Mus musculus BAC clone RP23-387F19 from chromosom... 42 2.3
20gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete... 42 2.3
21gb|AC090434.43| Chlamydomonas reinhardtii clone cr-1j6, complete... 42 2.3
22gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, comple... 42 2.3
23emb|BX510986.8| Zebrafish DNA sequence from clone CH211-173P18 i... 42 2.3
24emb|AJ865833.1| Paramecium tetraurelia epi1 gene for epiplasmin ... 42 2.3
25gb|AC139316.4| Mus musculus BAC clone RP24-500I24 from 3, comple... 42 2.3
26gb|AC150428.3| Branchiostoma floridae clone CH302-86J11, complet... 40 9.2
27gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 9.2
28gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
29gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
30gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
31gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 9.2
32emb|CR381596.11| Zebrafish DNA sequence from clone DKEY-230M3 in... 40 9.2
33gb|AF143772.2| Mycobacterium avium strain 2151 glycopeptidolipid... 40 9.2
34emb|AL606463.6| Human DNA sequence from clone RP11-485D21 on chr... 40 9.2
35gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 9.2
36emb|AL359851.19| Human DNA sequence from clone RP13-192B19 on ch... 40 9.2
37emb|AL390208.17| Human DNA sequence from clone RP11-787I22 on ch... 40 9.2
38gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 9.2
39gb|AC158218.4| Mus musculus chromosome 8, clone RP23-196J23, com... 40 9.2
40gb|AY128672.1| Drosophila pseudoobscura daughter of sevenless (d... 40 9.2
41emb|Z35144.1|BFHOX4G B.floridae Hox-4 gene for homeobox protein ... 40 9.2
42emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete ... 40 9.2
43emb|BX640425.1| Bordetella parapertussis strain 12822, complete ... 40 9.2
44emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete ... 40 9.2
45emb|AJ277794.1|MMU277794 Mus musculus gene for albumin, exons 1-5 40 9.2
46emb|AJ246003.1|HSA246003 Homo sapiens Spast gene for spastin pro... 40 9.2
47dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 9.2
48gb|AC146755.23| Medicago truncatula clone mth2-15i15, complete s... 40 9.2
49gb|AC161887.5| Mus musculus 6 BAC RP23-75P5 (Roswell Park Cancer... 40 9.2
50gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 9.2
51gb|AC158535.2| Mus musculus BAC clone RP23-28J6 from chromosome ... 40 9.2
52gb|AF386507.1|AF386507 Streptomyces lavendulae complestatin bios... 40 9.2
53gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 9.2
54dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
55dbj|AB197124.1| Burkholderia multivorans genes for hypothetical ... 40 9.2
56gb|AC024706.6| Homo sapiens BAC clone RP11-119J20 from 4, comple... 40 9.2
57gb|AC021199.7|AC021199 Arabidopsis thaliana chromosome 1 BAC F7F... 40 9.2
58dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 9.2
59gb|AC124817.2| Branchiostoma floridae, clone -10F3, complete seq... 40 9.2
60gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 9.2
61gb|AC158685.4| Mus musculus 6 BAC RP23-284D11 (Roswell Park Canc... 40 9.2
62dbj|AP005564.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
63dbj|AB164048.1| Cavia porcellus SMBP mRNA for SM-11044 binding p... 40 9.2
64ref|NM_209296.1| Eremothecium gossypii ADL153Wp (ADL153W), mRNA 40 9.2
65emb|AL121658.4|CNS01DS8 BAC sequence from the SPG4 candidate reg... 40 9.2
66gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 9.2
67gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 9.2
68gb|AC150390.2| Branchiostoma floridae clone CH302-115N8, complet... 40 9.2
69emb|AL773574.1|HS16H18 Homo sapiens chromosome 21 from PAC cosmi... 40 9.2
70emb|AL645797.11| Mouse DNA sequence from clone RP23-153J5 on chr... 40 9.2
71gb|AC140220.4| Mus musculus BAC clone RP23-279P6 from 5, complet... 40 9.2
72emb|AL713885.1|CNS07YP2 Mus musculus chromosome 11 region in the... 40 9.2
73emb|AL713884.1|CNS07YP1 Mus musculus chromosome 11 region in the... 40 9.2
74emb|AL831727.6| Mouse DNA sequence from clone RP23-210M20 on chr... 40 9.2
75dbj|AB028208.1| Branchiostoma floridae AmphiHox4 gene, complete cds 40 9.2
76dbj|AB023785.1| Streptomyces griseus gene for ORF3, ORF2, transc... 40 9.2 
>gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0074L11, complete sequence
          Length = 180703

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 119/141 (84%), Gaps = 1/141 (0%)
 Strand = Plus / Plus

                                                                         
Query: 469   cctcgagctcgcgcacgaggccctgcaacgatgagcagaggcggcagcgcggcgaataga 528
             ||||||||||||||||||| ||||||| ||| ||||| |||||||| || ||||| ||||
Sbjct: 66124 cctcgagctcgcgcacgagcccctgcagcgacgagcacaggcggcaccggggcgagtaga 66183

                                                                         
Query: 529   actccagcaccgtggtcgccctcgaactcaccagcgtcgccgccagcgcccgctgttccg 588
             |||||||||| || |   |||||   ||| ||||||  ||||| ||||||||||| ||||
Sbjct: 66184 actccagcacggtcgcgtccctcccgctcgccagcgctgccgcgagcgcccgctgctccg 66243

                                  
Query: 589   cgtcccccgcggtccgcctcc 609
             | | |||||||||||||||||
Sbjct: 66244 cct-ccccgcggtccgcctcc 66263



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 135/166 (81%)
 Strand = Plus / Plus

                                                                         
Query: 240   ctcttctttccttcctgcccagatggttgcttcatgttaagaagatgacgaaggccagca 299
             |||||| ||||||| ||| |||||   || |||||||||||||| ||| |||||||||| 
Sbjct: 64206 ctcttcgttccttcttgcacagatatctgattcatgttaagaaggtgatgaaggccagcg 64265

                                                                         
Query: 300   ataacatgatgcctgctagttgggactccggttttcgctagggctctaccattcttgtcc 359
             || || || ||||||||||| || || || || || |||| |||||  ||||||||||| 
Sbjct: 64266 atgacgtgctgcctgctagtcggtacgccagtctttgctaaggctcgtccattcttgtca 64325

                                                           
Query: 360   aggagcacgaaacaaggaacatatctgacatcataatgcagaagct 405
             || ||||| || || || ||||||||||  || |||||||||||||
Sbjct: 64326 agaagcacaaagcacgggacatatctgatgtcgtaatgcagaagct 64371



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 40/40 (100%)
 Strand = Plus / Plus

                                                     
Query: 408   gggagccaccggtcgtcctcggcgtcggcgagcacgaagc 447
             ||||||||||||||||||||||||||||||||||||||||
Sbjct: 66063 gggagccaccggtcgtcctcggcgtcggcgagcacgaagc 66102
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 119/141 (84%), Gaps = 1/141 (0%)
 Strand = Plus / Plus

                                                                            
Query: 469      cctcgagctcgcgcacgaggccctgcaacgatgagcagaggcggcagcgcggcgaataga 528
                ||||||||||||||||||| ||||||| ||| ||||| |||||||| || ||||| ||||
Sbjct: 21714071 cctcgagctcgcgcacgagcccctgcagcgacgagcacaggcggcaccggggcgagtaga 21714130

                                                                            
Query: 529      actccagcaccgtggtcgccctcgaactcaccagcgtcgccgccagcgcccgctgttccg 588
                |||||||||| || |   |||||   ||| ||||||  ||||| ||||||||||| ||||
Sbjct: 21714131 actccagcacggtcgcgtccctcccgctcgccagcgctgccgcgagcgcccgctgctccg 21714190

                                     
Query: 589      cgtcccccgcggtccgcctcc 609
                | | |||||||||||||||||
Sbjct: 21714191 cct-ccccgcggtccgcctcc 21714210



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 135/166 (81%)
 Strand = Plus / Plus

                                                                            
Query: 240      ctcttctttccttcctgcccagatggttgcttcatgttaagaagatgacgaaggccagca 299
                |||||| ||||||| ||| |||||   || |||||||||||||| ||| |||||||||| 
Sbjct: 21712153 ctcttcgttccttcttgcacagatatctgattcatgttaagaaggtgatgaaggccagcg 21712212

                                                                            
Query: 300      ataacatgatgcctgctagttgggactccggttttcgctagggctctaccattcttgtcc 359
                || || || ||||||||||| || || || || || |||| |||||  ||||||||||| 
Sbjct: 21712213 atgacgtgctgcctgctagtcggtacgccagtctttgctaaggctcgtccattcttgtca 21712272

                                                              
Query: 360      aggagcacgaaacaaggaacatatctgacatcataatgcagaagct 405
                || ||||| || || || ||||||||||  || |||||||||||||
Sbjct: 21712273 agaagcacaaagcacgggacatatctgatgtcgtaatgcagaagct 21712318



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 40/40 (100%)
 Strand = Plus / Plus

                                                        
Query: 408      gggagccaccggtcgtcctcggcgtcggcgagcacgaagc 447
                ||||||||||||||||||||||||||||||||||||||||
Sbjct: 21714010 gggagccaccggtcgtcctcggcgtcggcgagcacgaagc 21714049



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                            
Query: 465      ccgccctcgagctcgcgcacgaggccctgcaacgatgagcagaggcggcagcgcggcgaa 524
                ||||||||||||||||||||||| ||||||| ||| | ||| ||||||   ||||| || 
Sbjct: 22015834 ccgccctcgagctcgcgcacgagcccctgcagcgacgcgcacaggcggagccgcggggag 22015893

                              
Query: 525      tagaactccagcac 538
                ||||||||||||||
Sbjct: 22015894 tagaactccagcac 22015907



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                               
Query: 408      gggagccaccggtcgtcctcggcgtcggcga 438
                |||||||||||||||||||||||||||||||
Sbjct: 21917188 gggagccaccggtcgtcctcggcgtcggcga 21917218



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                      
Query: 410      gagccaccggtcgtcctcggcgtcggcgagcacgaagc 447
                ||||||||||||||||||||||||||||| | ||||||
Sbjct: 22015780 gagccaccggtcgtcctcggcgtcggcgatcgcgaagc 22015817



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                      
Query: 410      gagccaccggtcgtcctcggcgtcggcgagcacgaagc 447
                ||||||||||||||||||||||||||||| | ||||||
Sbjct: 21954312 gagccaccggtcgtcctcggcgtcggcgatcgcgaagc 21954349



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                            
Query: 469      cctcgagctcgcgcacgaggccctgcaacgatgagcagaggcggcagcgcggcgaataga 528
                |||||||||| |||||||| ||||||| ||| | ||| ||||||   | ||| || ||||
Sbjct: 21954371 cctcgagctctcgcacgagcccctgcagcgacgcgcacaggcggagccacggggagtaga 21954430

                          
Query: 529      actccagcac 538
                ||||||||||
Sbjct: 21954431 actccagcac 21954440



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                            
Query: 469      cctcgagctcgcgcacgaggccctgcaacgatgagcagaggcggcagcgcggcgaataga 528
                ||||||||||||| ||||| ||||||| ||| | |||  |||||   ||||| || ||||
Sbjct: 21917249 cctcgagctcgcgtacgagcccctgcagcgacgcgcactggcggagccgcggggagtaga 21917308

                          
Query: 529      actccagcac 538
                ||||||||||
Sbjct: 21917309 actccagcac 21917318



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 562     gcgtcgccgccagcgcccgc 581
               ||||||||||||||||||||
Sbjct: 7181884 gcgtcgccgccagcgcccgc 7181903
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 97.6 bits (49), Expect = 5e-17
 Identities = 119/141 (84%), Gaps = 1/141 (0%)
 Strand = Plus / Plus

                                                                            
Query: 469      cctcgagctcgcgcacgaggccctgcaacgatgagcagaggcggcagcgcggcgaataga 528
                ||||||||||||||||||| ||||||| ||| ||||| |||||||| || ||||| ||||
Sbjct: 22024270 cctcgagctcgcgcacgagcccctgcagcgacgagcacaggcggcaccggggcgagtaga 22024329

                                                                            
Query: 529      actccagcaccgtggtcgccctcgaactcaccagcgtcgccgccagcgcccgctgttccg 588
                |||||||||| || |   |||||   ||| ||||||  ||||| ||||||||||| ||||
Sbjct: 22024330 actccagcacggtcgcgtccctcccgctcgccagcgctgccgcgagcgcccgctgctccg 22024389

                                     
Query: 589      cgtcccccgcggtccgcctcc 609
                | | |||||||||||||||||
Sbjct: 22024390 cct-ccccgcggtccgcctcc 22024409



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 135/166 (81%)
 Strand = Plus / Plus

                                                                            
Query: 240      ctcttctttccttcctgcccagatggttgcttcatgttaagaagatgacgaaggccagca 299
                |||||| ||||||| ||| |||||   || |||||||||||||| ||| |||||||||| 
Sbjct: 22022352 ctcttcgttccttcttgcacagatatctgattcatgttaagaaggtgatgaaggccagcg 22022411

                                                                            
Query: 300      ataacatgatgcctgctagttgggactccggttttcgctagggctctaccattcttgtcc 359
                || || || ||||||||||| || || || || || |||| |||||  ||||||||||| 
Sbjct: 22022412 atgacgtgctgcctgctagtcggtacgccagtctttgctaaggctcgtccattcttgtca 22022471

                                                              
Query: 360      aggagcacgaaacaaggaacatatctgacatcataatgcagaagct 405
                || ||||| || || || ||||||||||  || |||||||||||||
Sbjct: 22022472 agaagcacaaagcacgggacatatctgatgtcgtaatgcagaagct 22022517



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 40/40 (100%)
 Strand = Plus / Plus

                                                        
Query: 408      gggagccaccggtcgtcctcggcgtcggcgagcacgaagc 447
                ||||||||||||||||||||||||||||||||||||||||
Sbjct: 22024209 gggagccaccggtcgtcctcggcgtcggcgagcacgaagc 22024248



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                            
Query: 465      ccgccctcgagctcgcgcacgaggccctgcaacgatgagcagaggcggcagcgcggcgaa 524
                ||||||||||||||||||||||| ||||||| ||| | ||| ||||||   ||||| || 
Sbjct: 22325745 ccgccctcgagctcgcgcacgagcccctgcagcgacgcgcacaggcggagccgcggggag 22325804

                              
Query: 525      tagaactccagcac 538
                ||||||||||||||
Sbjct: 22325805 tagaactccagcac 22325818



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                               
Query: 408      gggagccaccggtcgtcctcggcgtcggcga 438
                |||||||||||||||||||||||||||||||
Sbjct: 22227387 gggagccaccggtcgtcctcggcgtcggcga 22227417



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                      
Query: 410      gagccaccggtcgtcctcggcgtcggcgagcacgaagc 447
                ||||||||||||||||||||||||||||| | ||||||
Sbjct: 22325691 gagccaccggtcgtcctcggcgtcggcgatcgcgaagc 22325728



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                      
Query: 410      gagccaccggtcgtcctcggcgtcggcgagcacgaagc 447
                ||||||||||||||||||||||||||||| | ||||||
Sbjct: 22264302 gagccaccggtcgtcctcggcgtcggcgatcgcgaagc 22264339



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                            
Query: 469      cctcgagctcgcgcacgaggccctgcaacgatgagcagaggcggcagcgcggcgaataga 528
                |||||||||| |||||||| ||||||| ||| | ||| ||||||   | ||| || ||||
Sbjct: 22264361 cctcgagctctcgcacgagcccctgcagcgacgcgcacaggcggagccacggggagtaga 22264420

                          
Query: 529      actccagcac 538
                ||||||||||
Sbjct: 22264421 actccagcac 22264430



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                            
Query: 469      cctcgagctcgcgcacgaggccctgcaacgatgagcagaggcggcagcgcggcgaataga 528
                ||||||||||||| ||||| ||||||| ||| | |||  |||||   ||||| || ||||
Sbjct: 22227448 cctcgagctcgcgtacgagcccctgcagcgacgcgcactggcggagccgcggggagtaga 22227507

                          
Query: 529      actccagcac 538
                ||||||||||
Sbjct: 22227508 actccagcac 22227517



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 562     gcgtcgccgccagcgcccgc 581
               ||||||||||||||||||||
Sbjct: 7247778 gcgtcgccgccagcgcccgc 7247797
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>gb|AC136842.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0085C16, complete sequence
          Length = 156069

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 64/74 (86%)
 Strand = Plus / Plus

                                                                         
Query: 465   ccgccctcgagctcgcgcacgaggccctgcaacgatgagcagaggcggcagcgcggcgaa 524
             ||||||||||||||||||||||| ||||||| ||| | ||| ||||||   ||||| || 
Sbjct: 53830 ccgccctcgagctcgcgcacgagcccctgcagcgacgcgcacaggcggagccgcggggag 53889

                           
Query: 525   tagaactccagcac 538
             ||||||||||||||
Sbjct: 53890 tagaactccagcac 53903



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                   
Query: 410   gagccaccggtcgtcctcggcgtcggcgagcacgaagc 447
             ||||||||||||||||||||||||||||| | ||||||
Sbjct: 53776 gagccaccggtcgtcctcggcgtcggcgatcgcgaagc 53813
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>gb|AC144700.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0017H17, complete sequence
          Length = 156331

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                             
Query: 408    gggagccaccggtcgtcctcggcgtcggcga 438
              |||||||||||||||||||||||||||||||
Sbjct: 128031 gggagccaccggtcgtcctcggcgtcggcga 128061



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                          
Query: 469    cctcgagctcgcgcacgaggccctgcaacgatgagcagaggcggcagcgcggcgaataga 528
              ||||||||||||| ||||| ||||||| ||| | |||  |||||   ||||| || ||||
Sbjct: 128092 cctcgagctcgcgtacgagcccctgcagcgacgcgcactggcggagccgcggggagtaga 128151

                        
Query: 529    actccagcac 538
              ||||||||||
Sbjct: 128152 actccagcac 128161
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>gb|AC114828.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0038L23, complete sequence
          Length = 124582

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                            
Query: 408   gggagccaccggtcgtcctcggcgtcggcga 438
             |||||||||||||||||||||||||||||||
Sbjct: 27202 gggagccaccggtcgtcctcggcgtcggcga 27232



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                   
Query: 410   gagccaccggtcgtcctcggcgtcggcgagcacgaagc 447
             ||||||||||||||||||||||||||||| | ||||||
Sbjct: 64117 gagccaccggtcgtcctcggcgtcggcgatcgcgaagc 64154



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                         
Query: 469   cctcgagctcgcgcacgaggccctgcaacgatgagcagaggcggcagcgcggcgaataga 528
             |||||||||| |||||||| ||||||| ||| | ||| ||||||   | ||| || ||||
Sbjct: 64176 cctcgagctctcgcacgagcccctgcagcgacgcgcacaggcggagccacggggagtaga 64235

                       
Query: 529   actccagcac 538
             ||||||||||
Sbjct: 64236 actccagcac 64245



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                         
Query: 469   cctcgagctcgcgcacgaggccctgcaacgatgagcagaggcggcagcgcggcgaataga 528
             ||||||||||||| ||||| ||||||| ||| | |||  |||||   ||||| || ||||
Sbjct: 27263 cctcgagctcgcgtacgagcccctgcagcgacgcgcactggcggagccgcggggagtaga 27322

                       
Query: 529   actccagcac 538
             ||||||||||
Sbjct: 27323 actccagcac 27332
to top
>ref|XM_723252.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY07455)
           partial mRNA
          Length = 1542

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 33  attcatcatcaggaaaaagtaca 55
           |||||||||||||||||||||||
Sbjct: 353 attcatcatcaggaaaaagtaca 375
to top
>gb|BC046682.1| Xenopus laevis, clone IMAGE:5542071, mRNA
          Length = 4856

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 96   caacttctaatgttctgaccatt 118
            |||||||||||||||||||||||
Sbjct: 3955 caacttctaatgttctgaccatt 3933
to top
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 563     cgtcgccgccagcgcccgctgttccg 588
               |||||||| |||||||||||||||||
Sbjct: 1048890 cgtcgccggcagcgcccgctgttccg 1048915
to top
>emb|AL137793.16| Human DNA sequence from clone RP5-1065P14 on chromosome 1q41-42.2
              Contains a novel pseudogene and a novel gene, complete
              sequence
          Length = 138419

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 217    caagaaaatgacatcatgatca 238
              ||||||||||||||||||||||
Sbjct: 116083 caagaaaatgacatcatgatca 116104
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 419     gtcgtcctcggcgtcggcgagc 440
               ||||||||||||||||||||||
Sbjct: 3218756 gtcgtcctcggcgtcggcgagc 3218777



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 421     cgtcctcggcgtcggcgagcac 442
               ||||||||||||||||||||||
Sbjct: 1528332 cgtcctcggcgtcggcgagcac 1528311



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 421     cgtcctcggcgtcggcgagc 440
               ||||||||||||||||||||
Sbjct: 1524301 cgtcctcggcgtcggcgagc 1524320
to top
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 116   atttatgagttggctaaaaata 137
             ||||||||||||||||||||||
Sbjct: 64095 atttatgagttggctaaaaata 64116
to top
>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome
          Length = 150715

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 421    cgtcctcggcgtcggcgagca 441
              |||||||||||||||||||||
Sbjct: 148698 cgtcctcggcgtcggcgagca 148678



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 421    cgtcctcggcgtcggcgagca 441
              |||||||||||||||||||||
Sbjct: 125311 cgtcctcggcgtcggcgagca 125331
to top
>gb|AC158552.5| Mus musculus chromosome 3, clone RP23-97D22, complete sequence
          Length = 235709

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 236    tcaactcttctttccttcctg 256
              |||||||||||||||||||||
Sbjct: 141897 tcaactcttctttccttcctg 141877
to top
>gb|AY615960.1| Trichinella spiralis adenosine deaminase mRNA, complete cds
          Length = 1422

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 116 atttatgagttggctaaaaat 136
           |||||||||||||||||||||
Sbjct: 832 atttatgagttggctaaaaat 852
to top
>gb|DQ480524.1| Hepatitis C virus subtype 6a strain 6a74, complete genome
          Length = 9361

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 502  agcagaggcggcagcgcggcg 522
            |||||||||||||||||||||
Sbjct: 6862 agcagaggcggcagcgcggcg 6882
to top
>gb|AC122913.4| Mus musculus BAC clone RP23-25J21 from 3, complete sequence
          Length = 205216

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 251    ttcctgcccagatggttgctt 271
              |||||||||||||||||||||
Sbjct: 163115 ttcctgcccagatggttgctt 163095
to top
>gb|AC121847.2| Mus musculus BAC clone RP24-86M13 from 3, complete sequence
          Length = 190165

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 141    tttccaacattgtctatgctt 161
              |||||||||||||||||||||
Sbjct: 189312 tttccaacattgtctatgctt 189292
to top
>gb|AC154303.2| Mus musculus BAC clone RP23-387F19 from chromosome 14, complete
             sequence
          Length = 199995

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 218   aagaaaatgacatcatgatca 238
             |||||||||||||||||||||
Sbjct: 60941 aagaaaatgacatcatgatca 60961
to top
>gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete sequence
          Length = 102653

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 559   ccagcgtcgccgccagcgcccgctg 583
             |||||| ||||||||||||||||||
Sbjct: 30640 ccagcgccgccgccagcgcccgctg 30616
to top
>gb|AC090434.43| Chlamydomonas reinhardtii clone cr-1j6, complete sequence
          Length = 127686

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 559    ccagcgtcgccgccagcgcccgctg 583
              |||||| ||||||||||||||||||
Sbjct: 115267 ccagcgccgccgccagcgcccgctg 115243
to top
>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome
          Length = 156487

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 421    cgtcctcggcgtcggcgagca 441
              |||||||||||||||||||||
Sbjct: 154423 cgtcctcggcgtcggcgagca 154403



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 421    cgtcctcggcgtcggcgagca 441
              |||||||||||||||||||||
Sbjct: 128880 cgtcctcggcgtcggcgagca 128900
to top
>emb|BX510986.8| Zebrafish DNA sequence from clone CH211-173P18 in linkage group 19,
             complete sequence
          Length = 157245

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 218   aagaaaatgacatcatgatca 238
             |||||||||||||||||||||
Sbjct: 19725 aagaaaatgacatcatgatca 19705
to top
>emb|AJ865833.1| Paramecium tetraurelia epi1 gene for epiplasmin 1, exons 1-3
          Length = 2935

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 137  atattttccaacattgtctat 157
            |||||||||||||||||||||
Sbjct: 2738 atattttccaacattgtctat 2758
to top
>gb|AC139316.4| Mus musculus BAC clone RP24-500I24 from 3, complete sequence
          Length = 187000

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 141   tttccaacattgtctatgctt 161
             |||||||||||||||||||||
Sbjct: 70952 tttccaacattgtctatgctt 70972
to top
>gb|AC150428.3| Branchiostoma floridae clone CH302-86J11, complete sequence
          Length = 193518

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 416    ccggtcgtcctcggcgtcgg 435
              ||||||||||||||||||||
Sbjct: 182329 ccggtcgtcctcggcgtcgg 182310
to top
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 559     ccagcgtcgccgccagcgcc 578
               ||||||||||||||||||||
Sbjct: 4259217 ccagcgtcgccgccagcgcc 4259236
to top
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
           OSJNBb0097K08 map C827S, complete sequence
          Length = 137870

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 562 gcgtcgccgccagcgcccgc 581
           ||||||||||||||||||||
Sbjct: 671 gcgtcgccgccagcgcccgc 652
to top
>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0026P08 map near C827S, complete sequence
          Length = 148676

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 562   gcgtcgccgccagcgcccgc 581
             ||||||||||||||||||||
Sbjct: 95027 gcgtcgccgccagcgcccgc 95046
to top
>gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone
             OSJNBb0031H05, complete sequence
          Length = 141200

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 418   ggtcgtcctcggcgtcggcg 437
             ||||||||||||||||||||
Sbjct: 60182 ggtcgtcctcggcgtcggcg 60163
to top
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 524     atagaactccagcaccgtgg 543
               ||||||||||||||||||||
Sbjct: 2737637 atagaactccagcaccgtgg 2737656
to top
>emb|CR381596.11| Zebrafish DNA sequence from clone DKEY-230M3 in linkage group 3,
             complete sequence
          Length = 157536

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   gttggctaaaaatatatttt 143
             ||||||||||||||||||||
Sbjct: 87184 gttggctaaaaatatatttt 87203
to top
>gb|AF143772.2| Mycobacterium avium strain 2151 glycopeptidolipid biosynthesis and
             daunorubicin resistance gene clusters and insertion
             sequences IS1601, IS1245 and IS1348, complete sequence
          Length = 71286

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 427   cggcgtcggcgagcacgaag 446
             ||||||||||||||||||||
Sbjct: 45700 cggcgtcggcgagcacgaag 45681
to top
>emb|AL606463.6| Human DNA sequence from clone RP11-485D21 on chromosome 1 Contains the
             5' end of a novel gene, complete sequence
          Length = 159304

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 123   agttggctaaaaatatattt 142
             ||||||||||||||||||||
Sbjct: 11356 agttggctaaaaatatattt 11337
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 558     accagcgtcgccgccagcgc 577
               ||||||||||||||||||||
Sbjct: 5176577 accagcgtcgccgccagcgc 5176596
to top
>emb|AL359851.19| Human DNA sequence from clone RP13-192B19 on chromosome Xq24-25
             Contains a translationally-controlled 1 tumor protein
             (TPT1) pseudogene, complete sequence
          Length = 109920

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   ttaacaaacaaaatatctga 183
             ||||||||||||||||||||
Sbjct: 43584 ttaacaaacaaaatatctga 43603
to top
>emb|AL390208.17| Human DNA sequence from clone RP11-787I22 on chromosome 6 Contains the
             3' part of a novel gene, the PA26 gene for p53 regulated
             PA26 nuclear protein and a CpG island, complete sequence
          Length = 109878

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   aacaaacaaaatatctgata 185
             ||||||||||||||||||||
Sbjct: 74470 aacaaacaaaatatctgata 74489
to top
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 425     ctcggcgtcggcgagcacga 444
               ||||||||||||||||||||
Sbjct: 1901518 ctcggcgtcggcgagcacga 1901499
to top
>gb|AC158218.4| Mus musculus chromosome 8, clone RP23-196J23, complete sequence
          Length = 239980

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 98     acttctaatgttctgaccatttatgagt 125
              |||| |||| ||||||||||||||||||
Sbjct: 152133 acttttaattttctgaccatttatgagt 152106
to top
>gb|AY128672.1| Drosophila pseudoobscura daughter of sevenless (dos) gene, complete
            cds
          Length = 6103

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 558  accagcgtcgccgccagcgc 577
            ||||||||||||||||||||
Sbjct: 2234 accagcgtcgccgccagcgc 2215
to top
>emb|Z35144.1|BFHOX4G B.floridae Hox-4 gene for homeobox protein (partial)
          Length = 317

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 416 ccggtcgtcctcggcgtcgg 435
           ||||||||||||||||||||
Sbjct: 227 ccggtcgtcctcggcgtcgg 246
to top
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16
          Length = 349497

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 560    cagcgtcgccgccagcgccc 579
              ||||||||||||||||||||
Sbjct: 175211 cagcgtcgccgccagcgccc 175192
to top
>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14
          Length = 348257

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 560    cagcgtcgccgccagcgccc 579
              ||||||||||||||||||||
Sbjct: 299014 cagcgtcgccgccagcgccc 298995
to top
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29
          Length = 313800

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 416  ccggtcgtcctcggcgtcggcgag 439
            ||||||||||||||| ||||||||
Sbjct: 9867 ccggtcgtcctcggcatcggcgag 9890
to top
>emb|AJ277794.1|MMU277794 Mus musculus gene for albumin, exons 1-5
          Length = 8600

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 130  taaaaatatattttccaaca 149
            ||||||||||||||||||||
Sbjct: 1356 taaaaatatattttccaaca 1337
to top
>emb|AJ246003.1|HSA246003 Homo sapiens Spast gene for spastin protein
          Length = 110000

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 166   aacaaacaaaatatctgata 185
             ||||||||||||||||||||
Sbjct: 87885 aacaaacaaaatatctgata 87866
to top
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 517     gcggcgaatagaactccagc 536
               ||||||||||||||||||||
Sbjct: 1704587 gcggcgaatagaactccagc 1704568
to top
>gb|AC146755.23| Medicago truncatula clone mth2-15i15, complete sequence
          Length = 108159

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 238   aactcttctttccttcctgc 257
             ||||||||||||||||||||
Sbjct: 98999 aactcttctttccttcctgc 98980
to top
>gb|AC161887.5| Mus musculus 6 BAC RP23-75P5 (Roswell Park Cancer Institute (C57BL/6J
            Female) Mouse BAC Library) complete sequence
          Length = 227751

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 215  cacaagaaaatgacatcatg 234
            ||||||||||||||||||||
Sbjct: 8799 cacaagaaaatgacatcatg 8780
to top
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV,
              complete sequence
          Length = 1466886

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 428    ggcgtcggcgagcacgaagc 447
              ||||||||||||||||||||
Sbjct: 422027 ggcgtcggcgagcacgaagc 422008
to top
>gb|AC158535.2| Mus musculus BAC clone RP23-28J6 from chromosome 13, complete sequence
          Length = 216469

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 235    atcaactcttctttccttcc 254
              ||||||||||||||||||||
Sbjct: 133721 atcaactcttctttccttcc 133740
to top
>gb|AF386507.1|AF386507 Streptomyces lavendulae complestatin biosynthetic gene cluster,
            complete sequence
          Length = 55972

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 427  cggcgtcggcgagcacgaag 446
            ||||||||||||||||||||
Sbjct: 9081 cggcgtcggcgagcacgaag 9062
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 425     ctcggcgtcggcgagcacga 444
               ||||||||||||||||||||
Sbjct: 4320238 ctcggcgtcggcgagcacga 4320257
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 418      ggtcgtcctcggcgtcggcg 437
                ||||||||||||||||||||
Sbjct: 21603556 ggtcgtcctcggcgtcggcg 21603537
to top
>dbj|AB197124.1| Burkholderia multivorans genes for hypothetical protein, ribonuclease
            P protein component, 50S ribosomal protein L34, DnaA,
            DnaN, GyrB, partial and complete cds
          Length = 7321

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 466  cgccctcgagctcgcgcacg 485
            ||||||||||||||||||||
Sbjct: 2535 cgccctcgagctcgcgcacg 2516
to top
>gb|AC024706.6| Homo sapiens BAC clone RP11-119J20 from 4, complete sequence
          Length = 169557

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   aaaatatattttccaacatt 151
             ||||||||||||||||||||
Sbjct: 68546 aaaatatattttccaacatt 68565
to top
>gb|AC021199.7|AC021199 Arabidopsis thaliana chromosome 1 BAC F7F23 genomic sequence,
            complete sequence
          Length = 73252

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 165  taacaaacaaaatatctgat 184
            ||||||||||||||||||||
Sbjct: 8888 taacaaacaaaatatctgat 8907
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 416     ccggtcgtcctcggcgtcggcgag 439
               ||||||||||||||| ||||||||
Sbjct: 6378724 ccggtcgtcctcggcatcggcgag 6378701
to top
>gb|AC124817.2| Branchiostoma floridae, clone -10F3, complete sequence
          Length = 133980

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 416   ccggtcgtcctcggcgtcgg 435
             ||||||||||||||||||||
Sbjct: 52527 ccggtcgtcctcggcgtcgg 52508
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 416    ccggtcgtcctcggcgtcggcgag 439
              |||||||| |||||||||||||||
Sbjct: 805799 ccggtcgtactcggcgtcggcgag 805776
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>gb|AC158685.4| Mus musculus 6 BAC RP23-284D11 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 191856

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 215   cacaagaaaatgacatcatg 234
             ||||||||||||||||||||
Sbjct: 77063 cacaagaaaatgacatcatg 77044
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>dbj|AP005564.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1228_C03, complete sequence
          Length = 31468

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 418   ggtcgtcctcggcgtcggcg 437
             ||||||||||||||||||||
Sbjct: 11880 ggtcgtcctcggcgtcggcg 11861
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>dbj|AB164048.1| Cavia porcellus SMBP mRNA for SM-11044 binding protein, complete cds
          Length = 2870

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   tcatcatcaggaaaaagtac 54
            ||||||||||||||||||||
Sbjct: 2613 tcatcatcaggaaaaagtac 2594
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>ref|NM_209296.1| Eremothecium gossypii ADL153Wp (ADL153W), mRNA
          Length = 1662

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 428 ggcgtcggcgagcacgaagc 447
           ||||||||||||||||||||
Sbjct: 996 ggcgtcggcgagcacgaagc 977
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>emb|AL121658.4|CNS01DS8 BAC sequence from the SPG4 candidate region at 2p21-2p22 BAC 563N04 of
             library RPCI-11 from chromosome 2 of Homo sapiens (Human)
          Length = 162692

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 166   aacaaacaaaatatctgata 185
             ||||||||||||||||||||
Sbjct: 69145 aacaaacaaaatatctgata 69126
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 517     gcggcgaatagaactccagc 536
               ||||||||||||||||||||
Sbjct: 1728147 gcggcgaatagaactccagc 1728128
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 427     cggcgtcggcgagcacgaag 446
               ||||||||||||||||||||
Sbjct: 1310918 cggcgtcggcgagcacgaag 1310899
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>gb|AC150390.2| Branchiostoma floridae clone CH302-115N8, complete sequence
          Length = 230518

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 416    ccggtcgtcctcggcgtcgg 435
              ||||||||||||||||||||
Sbjct: 214891 ccggtcgtcctcggcgtcgg 214872
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>emb|AL773574.1|HS16H18 Homo sapiens chromosome 21 from PAC cosmid LL21NC02-16H18 map
             21q22.2,D21S349-MX1, complete sequence
          Length = 35713

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 241   tcttctttccttcctgccca 260
             ||||||||||||||||||||
Sbjct: 20411 tcttctttccttcctgccca 20430
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>emb|AL645797.11| Mouse DNA sequence from clone RP23-153J5 on chromosome 11 Contains a
             novel gene and a CpG island, complete sequence
          Length = 190784

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   atcaactcttctttccttcc 254
             ||||||||||||||||||||
Sbjct: 43610 atcaactcttctttccttcc 43629
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>gb|AC140220.4| Mus musculus BAC clone RP23-279P6 from 5, complete sequence
          Length = 182156

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 130    taaaaatatattttccaaca 149
              ||||||||||||||||||||
Sbjct: 112677 taaaaatatattttccaaca 112658
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>emb|AL713885.1|CNS07YP2 Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6)
              clone 330D23 of library Caltech CITB-BAC from chromosome 11
              of Mus musculus (mouse)
          Length = 181075

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 235    atcaactcttctttccttcc 254
              ||||||||||||||||||||
Sbjct: 148491 atcaactcttctttccttcc 148472
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>emb|AL713884.1|CNS07YP1 Mus musculus chromosome 11 region in the Om locus area (D11Mit37-Scya6)
             clone 205M5 of library Caltech CITB-BAC from chromosome 11
             of Mus musculus (mouse)
          Length = 120637

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 235   atcaactcttctttccttcc 254
             ||||||||||||||||||||
Sbjct: 88057 atcaactcttctttccttcc 88038
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>emb|AL831727.6| Mouse DNA sequence from clone RP23-210M20 on chromosome 4, complete
             sequence
          Length = 176930

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 490   cctgcaacgatgagcagagg 509
             ||||||||||||||||||||
Sbjct: 55708 cctgcaacgatgagcagagg 55727
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>dbj|AB028208.1| Branchiostoma floridae AmphiHox4 gene, complete cds
          Length = 3608

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 416  ccggtcgtcctcggcgtcgg 435
            ||||||||||||||||||||
Sbjct: 2474 ccggtcgtcctcggcgtcgg 2493
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>dbj|AB023785.1| Streptomyces griseus gene for ORF3, ORF2, transcription factor
           AdpA, ORF1, ORF4, ORF5, partial and complete cds
          Length = 7109

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 416 ccggtcgtcctcggcgtcggcgag 439
           ||||||||||||||| ||||||||
Sbjct: 484 ccggtcgtcctcggcatcggcgag 507


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,739,167
Number of Sequences: 3902068
Number of extensions: 6739167
Number of successful extensions: 162702
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 160749
Number of HSP's gapped (non-prelim): 1946
length of query: 673
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 650
effective length of database: 17,143,297,704
effective search space: 11143143507600
effective search space used: 11143143507600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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