| Clone Name | rbags15j23 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_197822.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0095C07.16), mRNA Length = 2061 Score = 281 bits (142), Expect = 1e-72 Identities = 282/328 (85%), Gaps = 3/328 (0%) Strand = Plus / Minus Query: 206 gagggccatcttcgtgatcaagtagcttggacttccatcgcatccccgccaccgtcctcc 265 |||| |||||||| |||||||| | |||||| ||||| ||||||||| ||| ||||||| Sbjct: 1990 gaggcccatcttcatgatcaagcaacttggatttccaccgcatccccatcactgtcctcc 1931 Query: 266 tgaccttgttcagcacctcgacattgtcccgcagtatgacagtgccctcaggacgcagga 325 | ||||||||||||||||| |||||||||||||||||||| | |||||||||||| | | Sbjct: 1930 taaccttgttcagcacctcaacattgtcccgcagtatgactgcgccctcaggacgtaaaa 1871 Query: 326 tcctatccatctcaagaagaatgtcttccaggtcacacttgttctcgtacaaactgaaga 385 ||||||||||||| |||||||||||||||| || ||||| |||| ||| || ||||||| Sbjct: 1870 tcctatccatctccagaagaatgtcttccatgttgcacttattctggtataagctgaaga 1811 Query: 386 cgccgctggcatgtatcaggtcatatgtcctagggtacgtagagaatgcttcgcaccagt 445 || |||||||||||| ||| ||||||||||| || |||||||| ||||| ||||| | Sbjct: 1810 gaccattggcatgtatcaagtcgtatgtcctaggatatgtagagaaggcttcacaccaat 1751 Query: 446 catggtatatgccaataagacctcgctcatagatgataccaagagtgttgttcctctccg 505 |||||||||||||||||||||||||||| || ||||||||||||| ||||| |||| | Sbjct: 1750 catggtatatgccaataagacctcgctcgtaaatgataccaagag---tgttcttctcag 1694 Query: 506 atatcgtaggcacaacgttcatgaccca 533 |||| || |||||||| ||||| ||||| Sbjct: 1693 atattgtgggcacaacattcattaccca 1666
>dbj|AK072459.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121D12, full insert sequence Length = 2438 Score = 281 bits (142), Expect = 1e-72 Identities = 282/328 (85%), Gaps = 3/328 (0%) Strand = Plus / Minus Query: 206 gagggccatcttcgtgatcaagtagcttggacttccatcgcatccccgccaccgtcctcc 265 |||| |||||||| |||||||| | |||||| ||||| ||||||||| ||| ||||||| Sbjct: 2013 gaggcccatcttcatgatcaagcaacttggatttccaccgcatccccatcactgtcctcc 1954 Query: 266 tgaccttgttcagcacctcgacattgtcccgcagtatgacagtgccctcaggacgcagga 325 | ||||||||||||||||| |||||||||||||||||||| | |||||||||||| | | Sbjct: 1953 taaccttgttcagcacctcaacattgtcccgcagtatgactgcgccctcaggacgtaaaa 1894 Query: 326 tcctatccatctcaagaagaatgtcttccaggtcacacttgttctcgtacaaactgaaga 385 ||||||||||||| |||||||||||||||| || ||||| |||| ||| || ||||||| Sbjct: 1893 tcctatccatctccagaagaatgtcttccatgttgcacttattctggtataagctgaaga 1834 Query: 386 cgccgctggcatgtatcaggtcatatgtcctagggtacgtagagaatgcttcgcaccagt 445 || |||||||||||| ||| ||||||||||| || |||||||| ||||| ||||| | Sbjct: 1833 gaccattggcatgtatcaagtcgtatgtcctaggatatgtagagaaggcttcacaccaat 1774 Query: 446 catggtatatgccaataagacctcgctcatagatgataccaagagtgttgttcctctccg 505 |||||||||||||||||||||||||||| || ||||||||||||| ||||| |||| | Sbjct: 1773 catggtatatgccaataagacctcgctcgtaaatgataccaagag---tgttcttctcag 1717 Query: 506 atatcgtaggcacaacgttcatgaccca 533 |||| || |||||||| ||||| ||||| Sbjct: 1716 atattgtgggcacaacattcattaccca 1689
>gb|AY111742.1| Zea mays CL20646_1 mRNA sequence Length = 622 Score = 165 bits (83), Expect = 2e-37 Identities = 197/235 (83%) Strand = Plus / Minus Query: 208 gggccatcttcgtgatcaagtagcttggacttccatcgcatccccgccaccgtcctcctg 267 |||||||| || ||||| |||| |||||||||||| ||||| || |||||| | || || Sbjct: 254 gggccatcctcatgatctagtaacttggacttccaccgcattcctgccaccatacttcta 195 Query: 268 accttgttcagcacctcgacattgtcccgcagtatgacagtgccctcaggacgcaggatc 327 ||||||||||| || ||| ||||||||||||||||||| | ||||| || || | ||| Sbjct: 194 accttgttcagtacatcggcattgtcccgcagtatgactgcaccctctggccgtaaaatc 135 Query: 328 ctatccatctcaagaagaatgtcttccaggtcacacttgttctcgtacaaactgaagacg 387 ||||||||||| |||||||||||||| ||||||||||||| || |||||||||| | Sbjct: 134 ctatccatctccagaagaatgtcttctgcatcacacttgttctgatataaactgaagatg 75 Query: 388 ccgctggcatgtatcaggtcatatgtcctagggtacgtagagaatgcttcgcacc 442 || || ||||||||||||| |||||||||||||| || ||||| |||||||||| Sbjct: 74 ccattgccatgtatcaggtcgtatgtcctagggtatgttgagaaggcttcgcacc 20
>gb|AC077693.19| Oryza sativa chromosome 10 BAC OSJNBa0095C07 genomic sequence, complete sequence Length = 187707 Score = 163 bits (82), Expect = 7e-37 Identities = 133/150 (88%) Strand = Plus / Minus Query: 206 gagggccatcttcgtgatcaagtagcttggacttccatcgcatccccgccaccgtcctcc 265 |||| |||||||| |||||||| | |||||| ||||| ||||||||| ||| ||||||| Sbjct: 57800 gaggcccatcttcatgatcaagcaacttggatttccaccgcatccccatcactgtcctcc 57741 Query: 266 tgaccttgttcagcacctcgacattgtcccgcagtatgacagtgccctcaggacgcagga 325 | ||||||||||||||||| |||||||||||||||||||| | |||||||||||| | | Sbjct: 57740 taaccttgttcagcacctcaacattgtcccgcagtatgactgcgccctcaggacgtaaaa 57681 Query: 326 tcctatccatctcaagaagaatgtcttcca 355 ||||||||||||| |||||||||||||||| Sbjct: 57680 tcctatccatctccagaagaatgtcttcca 57651 Score = 87.7 bits (44), Expect = 3e-14 Identities = 82/94 (87%), Gaps = 3/94 (3%) Strand = Plus / Minus Query: 440 accagtcatggtatatgccaataagacctcgctcatagatgataccaagagtgttgttcc 499 |||| ||||||||||||||||||||||||||||| || ||||||||||||| ||||| Sbjct: 57326 accaatcatggtatatgccaataagacctcgctcgtaaatgataccaagag---tgttct 57270 Query: 500 tctccgatatcgtaggcacaacgttcatgaccca 533 |||| ||||| || |||||||| ||||| ||||| Sbjct: 57269 tctcagatattgtgggcacaacattcattaccca 57236 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 392 tggcatgtatcaggtcatatgtcctagggtacgtagagaatgcttcgcacc 442 |||||||||||| ||| ||||||||||| || |||||||| ||||| |||| Sbjct: 57471 tggcatgtatcaagtcgtatgtcctaggatatgtagagaaggcttcacacc 57421
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 163 bits (82), Expect = 7e-37 Identities = 133/150 (88%) Strand = Plus / Minus Query: 206 gagggccatcttcgtgatcaagtagcttggacttccatcgcatccccgccaccgtcctcc 265 |||| |||||||| |||||||| | |||||| ||||| ||||||||| ||| ||||||| Sbjct: 22053256 gaggcccatcttcatgatcaagcaacttggatttccaccgcatccccatcactgtcctcc 22053197 Query: 266 tgaccttgttcagcacctcgacattgtcccgcagtatgacagtgccctcaggacgcagga 325 | ||||||||||||||||| |||||||||||||||||||| | |||||||||||| | | Sbjct: 22053196 taaccttgttcagcacctcaacattgtcccgcagtatgactgcgccctcaggacgtaaaa 22053137 Query: 326 tcctatccatctcaagaagaatgtcttcca 355 ||||||||||||| |||||||||||||||| Sbjct: 22053136 tcctatccatctccagaagaatgtcttcca 22053107 Score = 87.7 bits (44), Expect = 3e-14 Identities = 82/94 (87%), Gaps = 3/94 (3%) Strand = Plus / Minus Query: 440 accagtcatggtatatgccaataagacctcgctcatagatgataccaagagtgttgttcc 499 |||| ||||||||||||||||||||||||||||| || ||||||||||||| ||||| Sbjct: 22052782 accaatcatggtatatgccaataagacctcgctcgtaaatgataccaagag---tgttct 22052726 Query: 500 tctccgatatcgtaggcacaacgttcatgaccca 533 |||| ||||| || |||||||| ||||| ||||| Sbjct: 22052725 tctcagatattgtgggcacaacattcattaccca 22052692 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 392 tggcatgtatcaggtcatatgtcctagggtacgtagagaatgcttcgcacc 442 |||||||||||| ||| ||||||||||| || |||||||| ||||| |||| Sbjct: 22052927 tggcatgtatcaagtcgtatgtcctaggatatgtagagaaggcttcacacc 22052877 Score = 40.1 bits (20), Expect = 7.2 Identities = 47/56 (83%) Strand = Plus / Minus Query: 421 tacgtagagaatgcttcgcaccagtcatggtatatgccaataagacctcgctcata 476 ||||| ||||| ||||| |||||||| ||||| ||||||| | ||||||||||| Sbjct: 19105660 tacgtcgagaaagcttcacaccagtcctggtacgtgccaatgaatcctcgctcata 19105605
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 163 bits (82), Expect = 7e-37 Identities = 133/150 (88%) Strand = Plus / Minus Query: 206 gagggccatcttcgtgatcaagtagcttggacttccatcgcatccccgccaccgtcctcc 265 |||| |||||||| |||||||| | |||||| ||||| ||||||||| ||| ||||||| Sbjct: 22064919 gaggcccatcttcatgatcaagcaacttggatttccaccgcatccccatcactgtcctcc 22064860 Query: 266 tgaccttgttcagcacctcgacattgtcccgcagtatgacagtgccctcaggacgcagga 325 | ||||||||||||||||| |||||||||||||||||||| | |||||||||||| | | Sbjct: 22064859 taaccttgttcagcacctcaacattgtcccgcagtatgactgcgccctcaggacgtaaaa 22064800 Query: 326 tcctatccatctcaagaagaatgtcttcca 355 ||||||||||||| |||||||||||||||| Sbjct: 22064799 tcctatccatctccagaagaatgtcttcca 22064770 Score = 87.7 bits (44), Expect = 3e-14 Identities = 82/94 (87%), Gaps = 3/94 (3%) Strand = Plus / Minus Query: 440 accagtcatggtatatgccaataagacctcgctcatagatgataccaagagtgttgttcc 499 |||| ||||||||||||||||||||||||||||| || ||||||||||||| ||||| Sbjct: 22064445 accaatcatggtatatgccaataagacctcgctcgtaaatgataccaagag---tgttct 22064389 Query: 500 tctccgatatcgtaggcacaacgttcatgaccca 533 |||| ||||| || |||||||| ||||| ||||| Sbjct: 22064388 tctcagatattgtgggcacaacattcattaccca 22064355 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 392 tggcatgtatcaggtcatatgtcctagggtacgtagagaatgcttcgcacc 442 |||||||||||| ||| ||||||||||| || |||||||| ||||| |||| Sbjct: 22064590 tggcatgtatcaagtcgtatgtcctaggatatgtagagaaggcttcacacc 22064540 Score = 40.1 bits (20), Expect = 7.2 Identities = 47/56 (83%) Strand = Plus / Minus Query: 421 tacgtagagaatgcttcgcaccagtcatggtatatgccaataagacctcgctcata 476 ||||| ||||| ||||| |||||||| ||||| ||||||| | ||||||||||| Sbjct: 19116936 tacgtcgagaaagcttcacaccagtcctggtacgtgccaatgaatcctcgctcata 19116881
>dbj|AK121243.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099B06, full insert sequence Length = 2310 Score = 71.9 bits (36), Expect = 2e-09 Identities = 117/144 (81%) Strand = Plus / Minus Query: 307 gtgccctcaggacgcaggatcctatccatctcaagaagaatgtcttccaggtcacacttg 366 |||||||| || |||||||||| ||||||||| || || ||||| |||| | |||||| Sbjct: 1851 gtgccctccggccgcaggatccgatccatctccagcaggatgtcctccatcttgcacttg 1792 Query: 367 ttctcgtacaaactgaagacgccgctggcatgtatcaggtcatatgtcctagggtacgta 426 | || ||| | | ||||||| || || ||||||| ||||||||||| || ||||| || Sbjct: 1791 tccttgtagagagtgaagacaccattgccatgtatgaggtcatatgttcttgggtaagtg 1732 Query: 427 gagaatgcttcgcaccagtcatgg 450 |||||||| || |||||||||||| Sbjct: 1731 gagaatgcctcacaccagtcatgg 1708
>emb|AJ810709.1| Poa pratensis mRNA for Ankyrin protein kinase-like (apk gene) Length = 2703 Score = 69.9 bits (35), Expect = 8e-09 Identities = 107/131 (81%) Strand = Plus / Minus Query: 331 tccatctcaagaagaatgtcttccaggtcacacttgttctcgtacaaactgaagacgccg 390 ||||||||||| || |||||||||| | |||||||| | ||||| |||| | ||| Sbjct: 1967 tccatctcaaggaggatgtcttccaagctgcacttgtttttatacaaggtgaaaaggcca 1908 Query: 391 ctggcatgtatcaggtcatatgtcctagggtacgtagagaatgcttcgcaccagtcatgg 450 || ||||| ||||| ||||| ||||| || || |||||||| ||||| |||||||||||| Sbjct: 1907 ctagcatggatcagatcataggtccttggataagtagagaaagcttcacaccagtcatgg 1848 Query: 451 tatatgccaat 461 || |||||||| Sbjct: 1847 taaatgccaat 1837
>gb|AF220204.1|AF220204 Malus domestica unknown mRNA Length = 2375 Score = 63.9 bits (32), Expect = 5e-07 Identities = 71/84 (84%) Strand = Plus / Minus Query: 393 ggcatgtatcaggtcatatgtcctagggtacgtagagaatgcttcgcaccagtcatggta 452 |||||| || |||||||||||||| ||||| |||||||| |||| ||||| |||||||| Sbjct: 1810 ggcatgaatgaggtcatatgtccttgggtaagtagagaaaccttcacaccaatcatggta 1751 Query: 453 tatgccaataagacctcgctcata 476 || ||||| | ||||||||||| Sbjct: 1750 gattccaatcaatcctcgctcata 1727 Score = 48.1 bits (24), Expect = 0.030 Identities = 33/36 (91%) Strand = Plus / Minus Query: 319 cgcaggatcctatccatctcaagaagaatgtcttcc 354 |||| ||||| ||||||||| ||||||||||||||| Sbjct: 1884 cgcaagatccgatccatctctagaagaatgtcttcc 1849
>dbj|AK102287.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089J21, full insert sequence Length = 2371 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 418 gggtacgtagagaatgcttcgcaccagtcatggtatatgccaat 461 ||||| |||||||| |||||||||||||| |||||||||||||| Sbjct: 1813 gggtaagtagagaaagcttcgcaccagtcgtggtatatgccaat 1770
>gb|BT014522.1| Lycopersicon esculentum clone 133918F, mRNA sequence Length = 2199 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Minus Query: 343 agaatgtcttccaggtcacacttgttctcgtacaaactgaagacgccgctggcatgtatc 402 |||||||||| | ||||||||||| || || |||||||| | ||| | ||||| || Sbjct: 1668 agaatgtcttgaaagtcacacttgtccttatataaactgaaaaggccattagcatgaatg 1609 Query: 403 aggtcatatgtcctagggtacgtagagaatgcttcgcaccagtcatg 449 || ||||||||||| ||||| ||||| |||||||| ||||||||||| Sbjct: 1608 agatcatatgtccttgggtatgtagaaaatgcttcacaccagtcatg 1562
>gb|BT014452.1| Lycopersicon esculentum clone 133778R, mRNA sequence Length = 2259 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 403 aggtcatatgtcctagggtacgtagagaatgcttcgcaccagtcatggtatatgccaat 461 |||||||| || || ||||| |||||||| |||| ||||||||||||||||||||||| Sbjct: 1645 aggtcatacgttctcgggtatgtagagaagccttcacaccagtcatggtatatgccaat 1587
>emb|CR955005.2| Medicago truncatula chromosome 5 clone mte1-58c24, COMPLETE SEQUENCE Length = 106497 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 429 gaatgcttcgcaccagtcatggtatatgccaataagacctcgctcatagat 479 ||||| ||| ||||||||||||||||| |||| |||||| | ||||||||| Sbjct: 62119 gaatgattcacaccagtcatggtatatcccaaaaagacccctctcatagat 62069
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 436 tcgcaccagtcatggtatatgccaataagacctcgctcatagatgat 482 ||||||||||| ||||| ||||||| || ||||||||||||||||| Sbjct: 3969646 tcgcaccagtcgtggtacatgccaaacagccctcgctcatagatgat 3969600 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 436 tcgcaccagtcatggtatatgccaataagacctcgctcatagatgat 482 ||||||||||||||||| ||||| | || |||||||| |||||||| Sbjct: 3980017 tcgcaccagtcatggtacatgccgaacagccctcgctcgtagatgat 3979971
>dbj|AK069380.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023013C01, full insert sequence Length = 2319 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 406 tcatatgtcctagggtacgtagagaatgcttcgcaccagtcatggta 452 |||||||||||||| || || ||||||| ||||||||||||||||| Sbjct: 1610 tcatatgtcctaggatatgttgagaatggctcgcaccagtcatggta 1564
>dbj|AK058210.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-C05, full insert sequence Length = 1214 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 406 tcatatgtcctagggtacgtagagaatgcttcgcaccagtcatggta 452 |||||||||||||| || || ||||||| ||||||||||||||||| Sbjct: 544 tcatatgtcctaggatatgttgagaatggctcgcaccagtcatggta 498
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 436 tcgcaccagtcatggtatatgccaataagacctcgctcatagatgat 482 ||||||||||| ||||| ||||||| || ||||||||||||||||| Sbjct: 3969620 tcgcaccagtcgtggtacatgccaaacagccctcgctcatagatgat 3969574 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 436 tcgcaccagtcatggtatatgccaataagacctcgctcatagatgat 482 ||||||||||||||||| ||||| | || |||||||| |||||||| Sbjct: 3979993 tcgcaccagtcatggtacatgccgaacagccctcgctcgtagatgat 3979947
>emb|AL731882.2|CNS08C8M Oryza sativa chromosome 12, . BAC OSJNBb0028H07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132682 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 436 tcgcaccagtcatggtatatgccaataagacctcgctcatagatgat 482 ||||||||||| ||||| ||||||| || ||||||||||||||||| Sbjct: 6056 tcgcaccagtcgtggtacatgccaaacagccctcgctcatagatgat 6010 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 436 tcgcaccagtcatggtatatgccaataagacctcgctcatagatgat 482 ||||||||||||||||| ||||| | || |||||||| |||||||| Sbjct: 16427 tcgcaccagtcatggtacatgccgaacagccctcgctcgtagatgat 16381
>emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa0086B10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152090 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 436 tcgcaccagtcatggtatatgccaataagacctcgctcatagatgat 482 ||||||||||| ||||| ||||||| || ||||||||||||||||| Sbjct: 131622 tcgcaccagtcgtggtacatgccaaacagccctcgctcatagatgat 131576 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 436 tcgcaccagtcatggtatatgccaataagacctcgctcatagatgat 482 ||||||||||||||||| ||||| | || |||||||| |||||||| Sbjct: 141993 tcgcaccagtcatggtacatgccgaacagccctcgctcgtagatgat 141947
>ref|NM_129882.1| Arabidopsis thaliana unknown protein AT2G43200 mRNA, complete cds Length = 1836 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 372 gtacaaactgaagacgccgctggcatgtatcaggtcatatgtcctagggtacgtagagaa 431 |||||||||||| || || ||||||| ||||||||||| || | |||||| ||||| || Sbjct: 1626 gtacaaactgaatacaccattggcatgaatcaggtcataggttcgagggtatgtagataa 1567 Query: 432 tgcttcgcaccagt 445 ||||| ||||||| Sbjct: 1566 agcttcacaccagt 1553
>gb|AY107453.1| Zea mays PCO116376 mRNA sequence Length = 587 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 396 atgtatcaggtcatatgtcctagggtacgtagagaatgcttcgcaccagtcatg 449 |||||| |||||||||||||| || || |||||||| |||| ||||||||||| Sbjct: 65 atgtataaggtcatatgtccttggataagtagagaacccttcacaccagtcatg 12
>ref|NM_102449.2| Arabidopsis thaliana unknown protein AT1G26850 transcript variant AT1G26850.1 mRNA, complete cds Length = 2420 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 400 atcaggtcatatgtcctagggtacgtagagaatgcttcgcaccagtcatggta 452 |||||||||||||| || || || |||||||| || || |||||||||||||| Sbjct: 1885 atcaggtcatatgttcttggatatgtagagaaagcctcacaccagtcatggta 1833
>ref|NM_179379.1| Arabidopsis thaliana unknown protein AT1G26850 transcript variant AT1G26850.2 mRNA, complete cds Length = 2361 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 400 atcaggtcatatgtcctagggtacgtagagaatgcttcgcaccagtcatggta 452 |||||||||||||| || || || |||||||| || || |||||||||||||| Sbjct: 1826 atcaggtcatatgttcttggatatgtagagaaagcctcacaccagtcatggta 1774
>gb|AC151802.1| Solanum tuberosum chromosome 5 clone PGEC46 map MAP_LOC, complete sequence Length = 43509 Score = 50.1 bits (25), Expect = 0.007 Identities = 67/81 (82%) Strand = Plus / Plus Query: 362 acttgttctcgtacaaactgaagacgccgctggcatgtatcaggtcatatgtcctagggt 421 |||||| || ||| |||||||| | ||| || ||||| || || ||||||||||| |||| Sbjct: 913 acttgtccttgtataaactgaaaaggccactagcatgaatgagatcatatgtccttgggt 972 Query: 422 acgtagagaatgcttcgcacc 442 | ||||| |||||||| |||| Sbjct: 973 atgtagaaaatgcttcacacc 993
>gb|AC149267.1| Solanum demissum chromosome 5 clone PGEC747E24 map MAP_LOC, complete sequence Length = 92340 Score = 50.1 bits (25), Expect = 0.007 Identities = 67/81 (82%) Strand = Plus / Plus Query: 362 acttgttctcgtacaaactgaagacgccgctggcatgtatcaggtcatatgtcctagggt 421 |||||| || ||| |||||||| | ||| || ||||| || || ||||||||||| |||| Sbjct: 88175 acttgtccttgtataaactgaaaaggccactagcatgaatgagatcatatgtccttgggt 88234 Query: 422 acgtagagaatgcttcgcacc 442 | ||||| |||||||| |||| Sbjct: 88235 atgtagaaaatgcttcacacc 88255
>gb|AC149287.1| Solanum demissum chromosome 5 clone PGEC568D21 map MAP_LOC, complete sequence Length = 119525 Score = 50.1 bits (25), Expect = 0.007 Identities = 67/81 (82%) Strand = Plus / Plus Query: 362 acttgttctcgtacaaactgaagacgccgctggcatgtatcaggtcatatgtcctagggt 421 |||||| || ||| |||||||| | ||| || ||||| || || ||||||||||| |||| Sbjct: 1057 acttgtccttgtataaactgaaaaggccactagcatgaatgagatcatatgtccttgggt 1116 Query: 422 acgtagagaatgcttcgcacc 442 | ||||| |||||||| |||| Sbjct: 1117 atgtagaaaatgcttcacacc 1137
>gb|AY730334.1| Solanum tuberosum strain P6/210 clone BAC BA122p13, complete sequence Length = 91226 Score = 50.1 bits (25), Expect = 0.007 Identities = 67/81 (82%) Strand = Plus / Plus Query: 362 acttgttctcgtacaaactgaagacgccgctggcatgtatcaggtcatatgtcctagggt 421 |||||| || ||| |||||||| | ||| || ||||| || || ||||||||||| |||| Sbjct: 35403 acttgtccttgtataaactgaaaaggccactagcatgaatgagatcatatgtcctcgggt 35462 Query: 422 acgtagagaatgcttcgcacc 442 | ||||| |||||||| |||| Sbjct: 35463 atgtagaaaatgcttcacacc 35483
>gb|AC144791.1| Solanum demissum chromosome 5 BAC PGEC668E02 genomic sequence, complete sequence Length = 142575 Score = 50.1 bits (25), Expect = 0.007 Identities = 67/81 (82%) Strand = Plus / Minus Query: 362 acttgttctcgtacaaactgaagacgccgctggcatgtatcaggtcatatgtcctagggt 421 |||||| || ||| |||||||| | ||| || ||||| || || ||||||||||| |||| Sbjct: 44582 acttgtccttgtataaactgaaaaggccactagcatgaatgagatcatatgtccttgggt 44523 Query: 422 acgtagagaatgcttcgcacc 442 | ||||| |||||||| |||| Sbjct: 44522 atgtagaaaatgcttcacacc 44502
>gb|BT000640.1| Arabidopsis thaliana At1g26850/T2P11_4 mRNA, complete cds Length = 1851 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 400 atcaggtcatatgtcctagggtacgtagagaatgcttcgcaccagtcatggta 452 |||||||||||||| || || || |||||||| || || |||||||||||||| Sbjct: 1589 atcaggtcatatgttcttggatatgtagagaaagcctcacaccagtcatggta 1537
>gb|AY037230.1| Arabidopsis thaliana At1g26850/T2P11_4 mRNA, complete cds Length = 2296 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 400 atcaggtcatatgtcctagggtacgtagagaatgcttcgcaccagtcatggta 452 |||||||||||||| || || || |||||||| || || |||||||||||||| Sbjct: 1885 atcaggtcatatgttcttggatatgtagagaaagcctcacaccagtcatggta 1833
>gb|BT013699.1| Lycopersicon esculentum clone 132541R, mRNA sequence Length = 2467 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Minus Query: 406 tcatatgtcctagggtacgtagagaatgcttcgcaccagtcatg 449 ||||| ||||| ||||| |||||||| ||||| ||||||||||| Sbjct: 1810 tcataagtccttgggtatgtagagaacgcttcacaccagtcatg 1767
>dbj|AP006643.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT34A19, TM0249, complete sequence Length = 111706 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Minus Query: 439 caccagtcatggtatatgccaataagacctcgctcatagatgat 482 ||||| ||||||||||| |||| |||||| | |||||||||||| Sbjct: 38707 caccaatcatggtatatcccaaaaagacccctctcatagatgat 38664
>ref|NM_179405.2| Arabidopsis thaliana unknown protein AT1G31850 transcript variant AT1G31850.2 mRNA, complete cds Length = 2204 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 406 tcatatgtcctagggtacgtagagaatgcttcgcaccagtcatggta 452 |||||||| || || ||||| ||||| |||||||||||||| ||||| Sbjct: 1694 tcatatgttcttggatacgttgagaaagcttcgcaccagtcgtggta 1648
>ref|NM_202220.1| Arabidopsis thaliana unknown protein AT1G31850 transcript variant AT1G31850.3 mRNA, complete cds Length = 2258 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 406 tcatatgtcctagggtacgtagagaatgcttcgcaccagtcatggta 452 |||||||| || || ||||| ||||| |||||||||||||| ||||| Sbjct: 1748 tcatatgttcttggatacgttgagaaagcttcgcaccagtcgtggta 1702
>ref|NM_102922.3| Arabidopsis thaliana unknown protein AT1G31850 transcript variant AT1G31850.1 mRNA, complete cds Length = 2313 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 406 tcatatgtcctagggtacgtagagaatgcttcgcaccagtcatggta 452 |||||||| || || ||||| ||||| |||||||||||||| ||||| Sbjct: 1803 tcatatgttcttggatacgttgagaaagcttcgcaccagtcgtggta 1757
>gb|AC149291.1| Solanum demissum chromosome 5 clone PGEC568H16 map MAP_LOC, complete sequence Length = 146091 Score = 46.1 bits (23), Expect = 0.12 Identities = 56/67 (83%) Strand = Plus / Minus Query: 376 aaactgaagacgccgctggcatgtatcaggtcatatgtcctagggtacgtagagaatgct 435 |||||||| | ||| || ||||| || || ||||||||||| ||||| ||||| |||||| Sbjct: 101656 aaactgaaaaggccactagcatgaataagatcatatgtccttgggtatgtagaaaatgct 101597 Query: 436 tcgcacc 442 || |||| Sbjct: 101596 tcacacc 101590
>gb|AF083759.1| Arabidopsis thaliana clone sps626 unknown mRNA Length = 2129 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 406 tcatatgtcctagggtacgtagagaatgcttcgcaccagtcatggta 452 |||||||| || || ||||| ||||| |||||||||||||| ||||| Sbjct: 1713 tcatatgttcttggatacgttgagaaagcttcgcaccagtcgtggta 1667
>gb|BT000825.1| Arabidopsis thaliana unknown protein (At1g31850/68069_m00154) mRNA, complete cds Length = 1812 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 406 tcatatgtcctagggtacgtagagaatgcttcgcaccagtcatggta 452 |||||||| || || ||||| ||||| |||||||||||||| ||||| Sbjct: 1550 tcatatgttcttggatacgttgagaaagcttcgcaccagtcgtggta 1504
>gb|AY128291.1| Arabidopsis thaliana At1g31850/68069_m00154 mRNA, complete cds Length = 2165 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 406 tcatatgtcctagggtacgtagagaatgcttcgcaccagtcatggta 452 |||||||| || || ||||| ||||| |||||||||||||| ||||| Sbjct: 1694 tcatatgttcttggatacgttgagaaagcttcgcaccagtcgtggta 1648
>gb|AC006224.4| Arabidopsis thaliana chromosome 2 clone MFL8 map CIC10F02, complete sequence Length = 45714 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Plus Query: 372 gtacaaactgaagacgccgctggcatgtatcaggtcatatgtcctagggtacgtagagaa 431 |||||||||||| || || ||||||| ||||||||||| || | |||||| ||||| || Sbjct: 3757 gtacaaactgaatacaccattggcatgaatcaggtcataggttcgagggtatgtagataa 3816 Query: 432 tgcttcgcacc 442 ||||| |||| Sbjct: 3817 agcttcacacc 3827
>gb|AC004450.3| Arabidopsis thaliana chromosome 2 clone F14B2 map CIC10F02, complete sequence Length = 90283 Score = 46.1 bits (23), Expect = 0.12 Identities = 59/71 (83%) Strand = Plus / Minus Query: 372 gtacaaactgaagacgccgctggcatgtatcaggtcatatgtcctagggtacgtagagaa 431 |||||||||||| || || ||||||| ||||||||||| || | |||||| ||||| || Sbjct: 49299 gtacaaactgaatacaccattggcatgaatcaggtcataggttcgagggtatgtagataa 49240 Query: 432 tgcttcgcacc 442 ||||| |||| Sbjct: 49239 agcttcacacc 49229
>gb|AY104480.1| Zea mays PCO099563 mRNA sequence Length = 2194 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 436 tcgcaccagtcatggtatatgccaataagacctcgctcatagatgat 482 ||||||||||||||||| ||||||| | ||| ||||| |||||||| Sbjct: 1616 tcgcaccagtcatggtacatgccaaacaaaccgcgctcgtagatgat 1570
>gb|BC020010.1| Mus musculus RAB3D, member RAS oncogene family, mRNA (cDNA clone MGC:6707 IMAGE:3584902), complete cds Length = 3081 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 348 gtcttccaggtcacacttgttc 369 |||||||||||||||||||||| Sbjct: 549 gtcttccaggtcacacttgttc 528
>gb|AF111167.2|DJ293M10 Homo sapiens jun dimerization protein gene, partial cds; cfos gene, complete cds; and unknown gene Length = 202267 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 335 tctcaagaagaatgtcttccag 356 |||||||||||||||||||||| Sbjct: 116265 tctcaagaagaatgtcttccag 116244
>ref|NM_031874.3| Mus musculus RAB3D, member RAS oncogene family (Rab3d), mRNA Length = 3868 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 348 gtcttccaggtcacacttgttc 369 |||||||||||||||||||||| Sbjct: 657 gtcttccaggtcacacttgttc 636
>gb|AC166992.2| Mus musculus BAC clone RP24-144F18 from chromosome 9, complete sequence Length = 193799 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 348 gtcttccaggtcacacttgttc 369 |||||||||||||||||||||| Sbjct: 158129 gtcttccaggtcacacttgttc 158150
>gb|BC010779.1| Mus musculus RAB3D, member RAS oncogene family, mRNA (cDNA clone MGC:18711 IMAGE:4216156), complete cds Length = 2274 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 348 gtcttccaggtcacacttgttc 369 |||||||||||||||||||||| Sbjct: 524 gtcttccaggtcacacttgttc 503
>gb|AC146568.11| Medicago truncatula clone mth2-101o18, complete sequence Length = 129921 Score = 44.1 bits (22), Expect = 0.46 Identities = 46/54 (85%) Strand = Plus / Minus Query: 300 tatgacagtgccctcaggacgcaggatcctatccatctcaagaagaatgtcttc 353 |||||||| ||| || || |||| |||| ||||||||| |||||||||||||| Sbjct: 5550 tatgacagcgccttctggtcgcaatatccgatccatctcgagaagaatgtcttc 5497
>gb|AC148764.16| Medicago truncatula clone mth2-30o12, complete sequence Length = 107371 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 325 atcctatccatctcaagaagaatgtc 350 |||||||||||||||| ||||||||| Sbjct: 70232 atcctatccatctcaacaagaatgtc 70257
>dbj|AK169369.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920192P12 product:RAB3D, member RAS oncogene family, full insert sequence Length = 2230 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 348 gtcttccaggtcacacttgttc 369 |||||||||||||||||||||| Sbjct: 535 gtcttccaggtcacacttgttc 514
>dbj|AK048395.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130057E11 product:RAB3D, member RAS oncogene family, full insert sequence Length = 3827 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 348 gtcttccaggtcacacttgttc 369 |||||||||||||||||||||| Sbjct: 597 gtcttccaggtcacacttgttc 576
>dbj|AK078462.1| Mus musculus 12 days embryo male wolffian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6720486C03 product:RAB3D, member RAS oncogene family, full insert sequence Length = 2232 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 348 gtcttccaggtcacacttgttc 369 |||||||||||||||||||||| Sbjct: 536 gtcttccaggtcacacttgttc 515
>gb|AC160924.1| Medicago truncatula chromosome 7 BAC clone mte1-74g1, complete sequence Length = 98471 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 325 atcctatccatctcaagaagaatgtc 350 |||||||||||||||| ||||||||| Sbjct: 27318 atcctatccatctcaacaagaatgtc 27343
>gb|AF263366.1|AF263366 Mus musculus Rab3D (rab3d) gene, complete cds Length = 18272 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 348 gtcttccaggtcacacttgttc 369 |||||||||||||||||||||| Sbjct: 6518 gtcttccaggtcacacttgttc 6497
>gb|AF263365.1|AF263365 Mus musculus Rab3D (rab3d) mRNA, complete cds Length = 3868 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 348 gtcttccaggtcacacttgttc 369 |||||||||||||||||||||| Sbjct: 657 gtcttccaggtcacacttgttc 636
>gb|AY437839.1| Halomonas elongata TrkI (trkI) gene, complete cds Length = 1479 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 381 gaagacgccgctggcatgtatcaggt 406 ||||||||||||||| |||||||||| Sbjct: 1158 gaagacgccgctggcgtgtatcaggt 1133
>gb|M89777.1|MUSRAB3D Mus musculus GTP-binding protein (Rab3D) mRNA, complete cds Length = 703 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 348 gtcttccaggtcacacttgttc 369 |||||||||||||||||||||| Sbjct: 466 gtcttccaggtcacacttgttc 445
>ref|XM_476286.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1992 Score = 42.1 bits (21), Expect = 1.8 Identities = 72/89 (80%) Strand = Plus / Minus Query: 405 gtcatatgtcctagggtacgtagagaatgcttcgcaccagtcatggtatatgccaataag 464 |||||||||||| || ||||| ||||| || || |||||||| ||||| | ||||| | Sbjct: 1725 gtcatatgtcctcggatacgttgagaaagcctcacaccagtcttggtaggttccaatgaa 1666 Query: 465 acctcgctcatagatgataccaagagtgt 493 || | ||||||||| |||||||| |||| Sbjct: 1665 tcccctctcatagataataccaagggtgt 1637
>ref|XM_533913.2| PREDICTED: Canis familiaris similar to RAB3D, member RAS oncogene family (LOC476708), mRNA Length = 1275 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 349 tcttccaggtcacacttgttc 369 ||||||||||||||||||||| Sbjct: 634 tcttccaggtcacacttgttc 614
>ref|XM_743490.1| Aspergillus fumigatus Af293 MFS transporter (Afu3g02610) partial mRNA Length = 1299 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 245 gcatccccgccaccgtcctcc 265 ||||||||||||||||||||| Sbjct: 11 gcatccccgccaccgtcctcc 31
>gb|AF149811.1| Oryza sativa hypothetical protein gene, partial cds Length = 389 Score = 42.1 bits (21), Expect = 1.8 Identities = 72/89 (80%) Strand = Plus / Minus Query: 405 gtcatatgtcctagggtacgtagagaatgcttcgcaccagtcatggtatatgccaataag 464 |||||||||||| || ||||| ||||| || || |||||||| ||||| | ||||| | Sbjct: 109 gtcatatgtcctcggatacgttgagaaagcctcacaccagtcttggtaggttccaatgaa 50 Query: 465 acctcgctcatagatgataccaagagtgt 493 || | ||||||||| |||||||| |||| Sbjct: 49 tcccctctcatagataataccaagggtgt 21
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.8 Identities = 72/89 (80%) Strand = Plus / Plus Query: 405 gtcatatgtcctagggtacgtagagaatgcttcgcaccagtcatggtatatgccaataag 464 |||||||||||| || ||||| ||||| || || |||||||| ||||| | ||||| | Sbjct: 271669 gtcatatgtcctcggatacgttgagaaagcctcacaccagtcttggtaggttccaatgaa 271728 Query: 465 acctcgctcatagatgataccaagagtgt 493 || | ||||||||| |||||||| |||| Sbjct: 271729 tcccctctcatagataataccaagggtgt 271757 Score = 40.1 bits (20), Expect = 7.2 Identities = 65/80 (81%) Strand = Plus / Minus Query: 403 aggtcatatgtcctagggtacgtagagaatgcttcgcaccagtcatggtatatgccaata 462 ||||| |||||||| ||||| || ||||| ||||||||||||||||| || || || Sbjct: 29670311 aggtcgtatgtcctcgggtaggtgctgaatgactcgcaccagtcatggtacatcccgatc 29670252 Query: 463 agacctcgctcatagatgat 482 || |||||||| ||||||| Sbjct: 29670251 agccctcgctcgaagatgat 29670232
>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0075G19 Length = 163558 Score = 42.1 bits (21), Expect = 1.8 Identities = 72/89 (80%) Strand = Plus / Plus Query: 405 gtcatatgtcctagggtacgtagagaatgcttcgcaccagtcatggtatatgccaataag 464 |||||||||||| || ||||| ||||| || || |||||||| ||||| | ||||| | Sbjct: 136565 gtcatatgtcctcggatacgttgagaaagcctcacaccagtcttggtaggttccaatgaa 136624 Query: 465 acctcgctcatagatgataccaagagtgt 493 || | ||||||||| |||||||| |||| Sbjct: 136625 tcccctctcatagataataccaagggtgt 136653
>dbj|AK111870.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045F24, full insert sequence Length = 2322 Score = 42.1 bits (21), Expect = 1.8 Identities = 72/89 (80%) Strand = Plus / Minus Query: 405 gtcatatgtcctagggtacgtagagaatgcttcgcaccagtcatggtatatgccaataag 464 |||||||||||| || ||||| ||||| || || |||||||| ||||| | ||||| | Sbjct: 1764 gtcatatgtcctcggatacgttgagaaagcctcacaccagtcttggtaggttccaatgaa 1705 Query: 465 acctcgctcatagatgataccaagagtgt 493 || | ||||||||| |||||||| |||| Sbjct: 1704 tcccctctcatagataataccaagggtgt 1676
>ref|NM_106474.4| Arabidopsis thaliana unknown protein AT1G78240 mRNA, complete cds Length = 2760 Score = 40.1 bits (20), Expect = 7.2 Identities = 44/52 (84%) Strand = Plus / Minus Query: 394 gcatgtatcaggtcatatgtcctagggtacgtagagaatgcttcgcaccagt 445 ||||||| |||||||||||| || ||||| || | ||||| ||| ||||||| Sbjct: 2163 gcatgtaccaggtcatatgttctcgggtaagtcgggaatggttcacaccagt 2112
>ref|XM_474908.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 843 Score = 40.1 bits (20), Expect = 7.2 Identities = 35/40 (87%) Strand = Plus / Minus Query: 412 gtcctagggtacgtagagaatgcttcgcaccagtcatggt 451 ||||| ||||| ||||||||||| || |||||||| |||| Sbjct: 575 gtcctggggtatgtagagaatgcctcacaccagtcgtggt 536
>ref|NM_197301.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0005K07.2), mRNA Length = 2259 Score = 40.1 bits (20), Expect = 7.2 Identities = 47/56 (83%) Strand = Plus / Minus Query: 421 tacgtagagaatgcttcgcaccagtcatggtatatgccaataagacctcgctcata 476 ||||| ||||| ||||| |||||||| ||||| ||||||| | ||||||||||| Sbjct: 1777 tacgtcgagaaagcttcacaccagtcctggtacgtgccaatgaatcctcgctcata 1722
>ref|NM_197006.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0026O12.9), mRNA Length = 1855 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 406 tcatatgtcctagggtacgtagagaatgcttcgcaccagtcatg 449 |||||||| | ||| || || ||||||||||| ||||||||||| Sbjct: 1565 tcatatgttcgaggataggttgagaatgcttcacaccagtcatg 1522
>ref|NM_190294.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1842 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 cgctcatagatgataccaag 488 |||||||||||||||||||| Sbjct: 1517 cgctcatagatgataccaag 1498
>ref|XM_470738.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1836 Score = 40.1 bits (20), Expect = 7.2 Identities = 47/56 (83%) Strand = Plus / Minus Query: 394 gcatgtatcaggtcatatgtcctagggtacgtagagaatgcttcgcaccagtcatg 449 |||||||| || ||||||||||| || || ||||| ||| |||| ||||| ||||| Sbjct: 1583 gcatgtatgagatcatatgtccttggatatgtagaaaatccttcacaccaatcatg 1528
>gb|BT013643.1| Lycopersicon esculentum clone 132448F, mRNA sequence Length = 2253 Score = 40.1 bits (20), Expect = 7.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 406 tcatatgtcctagggtacgtagagaatgcttcgcaccagtcatg 449 ||||| |||||||| || || || |||||||| ||||||||||| Sbjct: 1626 tcataggtcctaggatatgttgaaaatgcttcacaccagtcatg 1583
>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034P08, complete sequence Length = 173088 Score = 40.1 bits (20), Expect = 7.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 395 catgtatcaggtcatatgtcctagggtacgtagagaatgc 434 ||||||| ||||||||||| || ||||| || |||||||| Sbjct: 63513 catgtatgaggtcatatgttcttgggtaagtggagaatgc 63552
>gb|AF360139.1| Arabidopsis thaliana At1g78240 mRNA sequence Length = 2832 Score = 40.1 bits (20), Expect = 7.2 Identities = 44/52 (84%) Strand = Plus / Minus Query: 394 gcatgtatcaggtcatatgtcctagggtacgtagagaatgcttcgcaccagt 445 ||||||| |||||||||||| || ||||| || | ||||| ||| ||||||| Sbjct: 2227 gcatgtaccaggtcatatgttctcgggtaagtcgggaatggttcacaccagt 2176
>gb|AC087192.14| Oryza sativa chromosome 10 BAC OSJNBa0005K07 genomic sequence, complete sequence Length = 113606 Score = 40.1 bits (20), Expect = 7.2 Identities = 47/56 (83%) Strand = Plus / Minus Query: 421 tacgtagagaatgcttcgcaccagtcatggtatatgccaataagacctcgctcata 476 ||||| ||||| ||||| |||||||| ||||| ||||||| | ||||||||||| Sbjct: 58231 tacgtcgagaaagcttcacaccagtcctggtacgtgccaatgaatcctcgctcata 58176
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.2 Identities = 35/40 (87%) Strand = Plus / Minus Query: 395 catgtatcaggtcatatgtcctagggtacgtagagaatgc 434 ||||||| ||||||||||| || ||||| || |||||||| Sbjct: 22277785 catgtatgaggtcatatgttcttgggtaagtggagaatgc 22277746
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 cgctcatagatgataccaag 488 |||||||||||||||||||| Sbjct: 39096605 cgctcatagatgataccaag 39096624
>emb|BX814932.1|CNS0ADZ2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS19ZG05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2709 Score = 40.1 bits (20), Expect = 7.2 Identities = 44/52 (84%) Strand = Plus / Minus Query: 394 gcatgtatcaggtcatatgtcctagggtacgtagagaatgcttcgcaccagt 445 ||||||| |||||||||||| || ||||| || | ||||| ||| ||||||| Sbjct: 2160 gcatgtaccaggtcatatgttctcgggtaagtcgggaatggttcacaccagt 2109
>dbj|AP003418.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0506A10 Length = 145265 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 469 cgctcatagatgataccaag 488 |||||||||||||||||||| Sbjct: 114585 cgctcatagatgataccaag 114604
>dbj|AP005463.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0712G01 Length = 87056 Score = 40.1 bits (20), Expect = 7.2 Identities = 65/80 (81%) Strand = Plus / Minus Query: 403 aggtcatatgtcctagggtacgtagagaatgcttcgcaccagtcatggtatatgccaata 462 ||||| |||||||| ||||| || ||||| ||||||||||||||||| || || || Sbjct: 43425 aggtcgtatgtcctcgggtaggtgctgaatgactcgcaccagtcatggtacatcccgatc 43366 Query: 463 agacctcgctcatagatgat 482 || |||||||| ||||||| Sbjct: 43365 agccctcgctcgaagatgat 43346
>dbj|AP004329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1663_H12 Length = 125422 Score = 40.1 bits (20), Expect = 7.2 Identities = 65/80 (81%) Strand = Plus / Minus Query: 403 aggtcatatgtcctagggtacgtagagaatgcttcgcaccagtcatggtatatgccaata 462 ||||| |||||||| ||||| || ||||| ||||||||||||||||| || || || Sbjct: 113896 aggtcgtatgtcctcgggtaggtgctgaatgactcgcaccagtcatggtacatcccgatc 113837 Query: 463 agacctcgctcatagatgat 482 || |||||||| ||||||| Sbjct: 113836 agccctcgctcgaagatgat 113817
>dbj|AK119277.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-B10, full insert sequence Length = 2538 Score = 40.1 bits (20), Expect = 7.2 Identities = 47/56 (83%) Strand = Plus / Minus Query: 394 gcatgtatcaggtcatatgtcctagggtacgtagagaatgcttcgcaccagtcatg 449 |||||||| || ||||||||||| || || ||||| ||| |||| ||||| ||||| Sbjct: 1708 gcatgtatgagatcatatgtccttggatatgtagaaaatccttcacaccaatcatg 1653
>dbj|AK108736.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-D09, full insert sequence Length = 931 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 469 cgctcatagatgataccaag 488 |||||||||||||||||||| Sbjct: 156 cgctcatagatgataccaag 137
>dbj|AK100601.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107D05, full insert sequence Length = 2722 Score = 40.1 bits (20), Expect = 7.2 Identities = 47/56 (83%) Strand = Plus / Minus Query: 421 tacgtagagaatgcttcgcaccagtcatggtatatgccaataagacctcgctcata 476 ||||| ||||| ||||| |||||||| ||||| ||||||| | ||||||||||| Sbjct: 1958 tacgtcgagaaagcttcacaccagtcctggtacgtgccaatgaatcctcgctcata 1903
>dbj|AK073237.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033005B11, full insert sequence Length = 2538 Score = 40.1 bits (20), Expect = 7.2 Identities = 47/56 (83%) Strand = Plus / Minus Query: 421 tacgtagagaatgcttcgcaccagtcatggtatatgccaataagacctcgctcata 476 ||||| ||||| ||||| |||||||| ||||| ||||||| | ||||||||||| Sbjct: 1861 tacgtcgagaaagcttcacaccagtcctggtacgtgccaatgaatcctcgctcata 1806
>dbj|AK065174.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002D01, full insert sequence Length = 2791 Score = 40.1 bits (20), Expect = 7.2 Identities = 35/40 (87%) Strand = Plus / Minus Query: 412 gtcctagggtacgtagagaatgcttcgcaccagtcatggt 451 ||||| ||||| ||||||||||| || |||||||| |||| Sbjct: 2092 gtcctggggtatgtagagaatgcctcacaccagtcgtggt 2053
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.2 Identities = 35/40 (87%) Strand = Plus / Minus Query: 395 catgtatcaggtcatatgtcctagggtacgtagagaatgc 434 ||||||| ||||||||||| || ||||| || |||||||| Sbjct: 22587696 catgtatgaggtcatatgttcttgggtaagtggagaatgc 22587657
>emb|AL672299.14| Mouse DNA sequence from clone RP23-287A19 on chromosome X, complete sequence Length = 131629 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 aagtagcttggacttccatc 244 |||||||||||||||||||| Sbjct: 73753 aagtagcttggacttccatc 73772 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,650,922 Number of Sequences: 3902068 Number of extensions: 3650922 Number of successful extensions: 67797 Number of sequences better than 10.0: 87 Number of HSP's better than 10.0 without gapping: 90 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 67437 Number of HSP's gapped (non-prelim): 357 length of query: 533 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 510 effective length of database: 17,143,297,704 effective search space: 8743081829040 effective search space used: 8743081829040 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)