ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags15j21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001016186.2| Xenopus tropicalis hypothetical protein LOC5... 50 0.005
2emb|CR761821.2| Xenopus tropicalis finished cDNA, clone TGas045b14 50 0.005
3ref|XM_387202.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 46 0.078
4ref|XM_815553.1| Trypanosoma cruzi strain CL Brener mucin-associ... 46 0.078
5gb|AY591612.1| Mus musculus clone IgK19-13 immunoglobulin kappa-... 44 0.31
6gb|AC153928.5| Mus musculus 6 BAC RP23-66O20 (Roswell Park Cance... 44 0.31
7gb|AC156284.8| Mus musculus 6 BAC RP24-392D13 (Roswell Park Canc... 44 0.31
8gb|AC153855.4| Mus musculus 6 BAC RP23-175B24 (Roswell Park Canc... 44 0.31
9gb|AC110821.5| Mus musculus BAC clone RP23-418H19 from chromosom... 44 0.31
10gb|AC116501.7| Mus musculus chromosome 5, clone RP24-300D7, comp... 42 1.2
11gb|AC140921.2| Mus musculus BAC clone RP24-472I23 from chromosom... 42 1.2
12gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 42 1.2
13gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.2
14gb|AC118681.6| Mus musculus chromosome 16, clone RP23-473M11, co... 42 1.2
15gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genom... 42 1.2
16dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
17emb|CT573074.1| Kuenenia stuttgartiensis genome fragment KUST_B ... 42 1.2
18gb|AC123673.7| Mus musculus chromosome 1, clone RP23-258D13, com... 40 4.8
19gb|BC108439.1| Xenopus laevis cDNA clone MGC:130663 IMAGE:776867... 40 4.8
20gb|AC159998.6| Mus musculus BAC clone RP24-576J22 from chromosom... 40 4.8
21gb|AC118688.10| Mus musculus chromosome 5, clone RP23-302F24, co... 40 4.8
22gb|AC007579.5| Drosophila melanogaster clone BACR07M03, complete... 40 4.8
23gb|AY750704.1| Tetranychus hydrangeae internal transcribed space... 40 4.8
24gb|AF313041.4| Homo sapiens chromosome 8 clone RP11-158K1 map q2... 40 4.8
25gb|AC123714.6| Mus musculus chromosome 9, clone RP23-393E20, com... 40 4.8
26emb|Z46894.1|DMFKBP39 D.melanogaster mRNA for FKBP39 40 4.8
27emb|X70876.1|HVMYB2 H.vulgare myb2 mRNA 40 4.8
28gb|AC159819.2| Mus musculus BAC clone RP23-180C14 from chromosom... 40 4.8
29emb|AL731611.2|OSJN00253 Oryza sativa genomic DNA, chromosome 4,... 40 4.8
30emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4,... 40 4.8
31gb|AC090198.7| Homo sapiens chromosome 8, clone RP11-158K1, comp... 40 4.8
32gb|AC112250.4| Homo sapiens BAC clone RP11-710E1 from 4, complet... 40 4.8
33ref|NM_206123.1| Drosophila melanogaster CG33464-PA (CG33464) mR... 40 4.8
34gb|AY094814.1| Drosophila melanogaster LD30817 full insert cDNA 40 4.8
35ref|NM_079640.2| Drosophila melanogaster FK506-binding protein 1... 40 4.8
36gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome 40 4.8
37gb|AC099024.1| Drosophila melanogaster, chromosome 2R, region 52... 40 4.8
38dbj|AK088542.1| Mus musculus 2 days neonate thymus thymic cells ... 40 4.8
39dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
40gb|AC007648.6|AC007648 Drosophila melanogaster, chromosome 3R, r... 40 4.8
41gb|AY625483.1| Aspergillus niger manganese superoxide dismutase ... 40 4.8
42gb|AC084658.1|CBRG46L07 Caenorhabditis briggsae cosmid G46L07, c... 40 4.8
43gb|AC084613.1|CBRG44E08 Caenorhabditis briggsae cosmid G44E08, c... 40 4.8
44gb|AC079833.4| Homo sapiens BAC clone CTD-2170K17 from 2, comple... 40 4.8
45dbj|AK073937.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.8
46dbj|AK059702.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.8
47gb|AC135251.2| Homo sapiens 12 BAC RP11-167E10 (Roswell Park Can... 40 4.8
48gb|AE003708.3| Drosophila melanogaster chromosome 3R, section 46... 40 4.8
49gb|AE003809.3| Drosophila melanogaster chromosome 2R, section 41... 40 4.8
50gb|BC087500.1| Xenopus laevis hypothetical LOC496082, mRNA (cDNA... 40 4.8
51gb|AC005556.1|AC005556 Drosophila melanogaster DNA sequence (P1s... 40 4.8
52gb|AC147720.1| Gallus gallus BAC clone CH261-46I14 from chromoso... 40 4.8
53gb|AC141892.4| Mus musculus BAC clone RP23-388J12 from 13, compl... 40 4.8
54emb|AJ812006.1| Aspergillus niger sodB gene for putative mangane... 40 4.8
55emb|AL591763.14| Mouse DNA sequence from clone RP23-480D17 on ch... 40 4.8 
>ref|NM_001016186.2| Xenopus tropicalis hypothetical protein LOC548940 (LOC548940), mRNA
          Length = 929

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 248 cttcttcttttgctgctgctgtttg 272
           |||||||||||||||||||||||||
Sbjct: 762 cttcttcttttgctgctgctgtttg 738
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>emb|CR761821.2| Xenopus tropicalis finished cDNA, clone TGas045b14
          Length = 929

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 248 cttcttcttttgctgctgctgtttg 272
           |||||||||||||||||||||||||
Sbjct: 762 cttcttcttttgctgctgctgtttg 738
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>ref|XM_387202.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07026.1)
           partial mRNA
          Length = 204

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 248 cttcttcttttgctgctgctgtt 270
           |||||||||||||||||||||||
Sbjct: 198 cttcttcttttgctgctgctgtt 176
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>ref|XM_815553.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein
           (MASP) (Tc00.1047053506599.330) partial mRNA
          Length = 1281

 Score = 46.1 bits (23), Expect = 0.078
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 248 cttcttcttttgctgctgctgtt 270
           |||||||||||||||||||||||
Sbjct: 880 cttcttcttttgctgctgctgtt 858
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>gb|AY591612.1| Mus musculus clone IgK19-13 immunoglobulin kappa-like gene, partial
           sequence
          Length = 3001

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 249 ttcttcttttgctgctgctgtt 270
           ||||||||||||||||||||||
Sbjct: 218 ttcttcttttgctgctgctgtt 239
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>gb|AC153928.5| Mus musculus 6 BAC RP23-66O20 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 241211

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 249    ttcttcttttgctgctgctgtt 270
              ||||||||||||||||||||||
Sbjct: 220192 ttcttcttttgctgctgctgtt 220213
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>gb|AC156284.8| Mus musculus 6 BAC RP24-392D13 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 182146

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 249    ttcttcttttgctgctgctgtt 270
              ||||||||||||||||||||||
Sbjct: 106965 ttcttcttttgctgctgctgtt 106944
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>gb|AC153855.4| Mus musculus 6 BAC RP23-175B24 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 183070

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 249   ttcttcttttgctgctgctgtt 270
             ||||||||||||||||||||||
Sbjct: 96213 ttcttcttttgctgctgctgtt 96192
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>gb|AC110821.5| Mus musculus BAC clone RP23-418H19 from chromosome 15, complete sequence
          Length = 213726

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 98     aggaagagagactcaggaaact 119
              ||||||||||||||||||||||
Sbjct: 138284 aggaagagagactcaggaaact 138305
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>gb|AC116501.7| Mus musculus chromosome 5, clone RP24-300D7, complete sequence
          Length = 174365

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 257   ttgctgctgctgtttggttgg 277
             |||||||||||||||||||||
Sbjct: 53221 ttgctgctgctgtttggttgg 53241
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>gb|AC140921.2| Mus musculus BAC clone RP24-472I23 from chromosome 5, complete sequence
          Length = 181004

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 257   ttgctgctgctgtttggttgg 277
             |||||||||||||||||||||
Sbjct: 45294 ttgctgctgctgtttggttgg 45274
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 255    ttttgctgctgctgtttggtt 275
              |||||||||||||||||||||
Sbjct: 411623 ttttgctgctgctgtttggtt 411603
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 248      cttcttcttttgctgctgctg 268
                |||||||||||||||||||||
Sbjct: 17148942 cttcttcttttgctgctgctg 17148962
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>gb|AC118681.6| Mus musculus chromosome 16, clone RP23-473M11, complete sequence
          Length = 279112

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 248    cttcttcttttgctgctgctg 268
              |||||||||||||||||||||
Sbjct: 212527 cttcttcttttgctgctgctg 212547
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>gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genomic sequence, complete
             sequence
          Length = 153247

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 248   cttcttcttttgctgctgctg 268
             |||||||||||||||||||||
Sbjct: 40335 cttcttcttttgctgctgctg 40355
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 248      cttcttcttttgctgctgctg 268
                |||||||||||||||||||||
Sbjct: 17142511 cttcttcttttgctgctgctg 17142531
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>emb|CT573074.1| Kuenenia stuttgartiensis genome fragment KUST_B (2 of 5)
          Length = 132284

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 248    cttcttcttttgctgctgctg 268
              |||||||||||||||||||||
Sbjct: 112167 cttcttcttttgctgctgctg 112147
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>gb|AC123673.7| Mus musculus chromosome 1, clone RP23-258D13, complete sequence
          Length = 191401

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 251    cttcttttgctgctgctgtt 270
              ||||||||||||||||||||
Sbjct: 126033 cttcttttgctgctgctgtt 126014
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>gb|BC108439.1| Xenopus laevis cDNA clone MGC:130663 IMAGE:7768676, complete cds
          Length = 1070

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 249 ttcttcttttgctgctgctgtttg 272
           |||||||| |||||||||||||||
Sbjct: 817 ttcttcttctgctgctgctgtttg 794
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>gb|AC159998.6| Mus musculus BAC clone RP24-576J22 from chromosome 10, complete
             sequence
          Length = 166313

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    tgaggaagagagactcagga 115
             ||||||||||||||||||||
Sbjct: 35718 tgaggaagagagactcagga 35737
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>gb|AC118688.10| Mus musculus chromosome 5, clone RP23-302F24, complete sequence
          Length = 176001

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 258    tgctgctgctgtttggttgg 277
              ||||||||||||||||||||
Sbjct: 109873 tgctgctgctgtttggttgg 109892
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>gb|AC007579.5| Drosophila melanogaster clone BACR07M03, complete sequence
          Length = 193262

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 251    cttcttttgctgctgctgtt 270
              ||||||||||||||||||||
Sbjct: 122153 cttcttttgctgctgctgtt 122134
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>gb|AY750704.1| Tetranychus hydrangeae internal transcribed spacer 2, partial
           sequence
          Length = 646

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 167 acaacaaaggaacaacataa 186
           ||||||||||||||||||||
Sbjct: 549 acaacaaaggaacaacataa 530
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>gb|AF313041.4| Homo sapiens chromosome 8 clone RP11-158K1 map q24.13, complete sequence
          Length = 193882

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 255    ttttgctgctgctgtttggt 274
              ||||||||||||||||||||
Sbjct: 127037 ttttgctgctgctgtttggt 127056
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>gb|AC123714.6| Mus musculus chromosome 9, clone RP23-393E20, complete sequence
          Length = 217860

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 251    cttcttttgctgctgctgtt 270
              ||||||||||||||||||||
Sbjct: 133767 cttcttttgctgctgctgtt 133786
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>emb|Z46894.1|DMFKBP39 D.melanogaster mRNA for FKBP39
          Length = 1265

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 248 cttcttcttttgctgctgct 267
           ||||||||||||||||||||
Sbjct: 736 cttcttcttttgctgctgct 717
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>emb|X70876.1|HVMYB2 H.vulgare myb2 mRNA
          Length = 1102

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 259 gctgctgctgtttggttggc 278
           ||||||||||||||||||||
Sbjct: 536 gctgctgctgtttggttggc 517
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>gb|AC159819.2| Mus musculus BAC clone RP23-180C14 from chromosome 9, complete sequence
          Length = 211119

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 251   cttcttttgctgctgctgtt 270
             ||||||||||||||||||||
Sbjct: 37888 cttcttttgctgctgctgtt 37907
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>emb|AL731611.2|OSJN00253 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D08,
              complete sequence
          Length = 142814

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 249    ttcttcttttgctgctgctg 268
              ||||||||||||||||||||
Sbjct: 138147 ttcttcttttgctgctgctg 138166
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>emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009P12,
             complete sequence
          Length = 179644

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                 
Query: 248   cttcttcttttgctgctgctgtttggttggcgatgcgatgccgttgttcgcc 299
             ||||||||||||| ||||||| ||||  || |||||| |||| ||| |||||
Sbjct: 77737 cttcttcttttgcggctgctgcttgggcggtgatgcgttgccattgctcgcc 77686
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>gb|AC090198.7| Homo sapiens chromosome 8, clone RP11-158K1, complete sequence
          Length = 156094

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 255    ttttgctgctgctgtttggt 274
              ||||||||||||||||||||
Sbjct: 127040 ttttgctgctgctgtttggt 127059
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>gb|AC112250.4| Homo sapiens BAC clone RP11-710E1 from 4, complete sequence
          Length = 79475

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    tgatgaggaagagagactca 112
             ||||||||||||||||||||
Sbjct: 59010 tgatgaggaagagagactca 58991
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>ref|NM_206123.1| Drosophila melanogaster CG33464-PA (CG33464) mRNA, complete cds
          Length = 1576

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 251 cttcttttgctgctgctgtt 270
           ||||||||||||||||||||
Sbjct: 525 cttcttttgctgctgctgtt 506
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>gb|AY094814.1| Drosophila melanogaster LD30817 full insert cDNA
          Length = 1332

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 248 cttcttcttttgctgctgct 267
           ||||||||||||||||||||
Sbjct: 768 cttcttcttttgctgctgct 749
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>ref|NM_079640.2| Drosophila melanogaster FK506-binding protein 1 CG6226-RA
           (FK506-bp1), mRNA
          Length = 1308

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 248 cttcttcttttgctgctgct 267
           ||||||||||||||||||||
Sbjct: 777 cttcttcttttgctgctgct 758
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>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome
          Length = 2679306

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 248     cttcttcttttgctgctgctgttt 271
               ||||||||| ||||||||||||||
Sbjct: 1785984 cttcttcttctgctgctgctgttt 1785961
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>gb|AC099024.1| Drosophila melanogaster, chromosome 2R, region 52X-53A, BAC clone
              BACR04J01, complete sequence
          Length = 182560

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 251    cttcttttgctgctgctgtt 270
              ||||||||||||||||||||
Sbjct: 180637 cttcttttgctgctgctgtt 180656
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>dbj|AK088542.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
           full-length enriched library, clone:E430019N24
           product:high mobility group 20A, full insert sequence
          Length = 4173

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 251 cttcttttgctgctgctgtt 270
           ||||||||||||||||||||
Sbjct: 185 cttcttttgctgctgctgtt 204
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                    
Query: 248      cttcttcttttgctgctgctgtttggttggcgatgcgatgccgttgttcgcc 299
                ||||||||||||| ||||||| ||||  || |||||| |||| ||| |||||
Sbjct: 29940985 cttcttcttttgcggctgctgcttgggcggtgatgcgttgccattgctcgcc 29940934



 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 249      ttcttcttttgctgctgctg 268
                ||||||||||||||||||||
Sbjct: 11129492 ttcttcttttgctgctgctg 11129511
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>gb|AC007648.6|AC007648 Drosophila melanogaster, chromosome 3R, region 88E-88F, BAC clone
             BACR13A02, complete sequence
          Length = 166141

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   cttcttcttttgctgctgct 267
             ||||||||||||||||||||
Sbjct: 91172 cttcttcttttgctgctgct 91191
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>gb|AY625483.1| Aspergillus niger manganese superoxide dismutase (MnSOD) gene,
           partial cds
          Length = 404

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 316 cgttgctgtcgagagcggag 335
           ||||||||||||||||||||
Sbjct: 70  cgttgctgtcgagagcggag 51
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>gb|AC084658.1|CBRG46L07 Caenorhabditis briggsae cosmid G46L07, complete sequence
          Length = 35227

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    accatgatgaggaagagaga 108
             ||||||||||||||||||||
Sbjct: 19805 accatgatgaggaagagaga 19824
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>gb|AC084613.1|CBRG44E08 Caenorhabditis briggsae cosmid G44E08, complete sequence
          Length = 41830

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   ttcttcttttgctgctgctg 268
             ||||||||||||||||||||
Sbjct: 37052 ttcttcttttgctgctgctg 37071
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>gb|AC079833.4| Homo sapiens BAC clone CTD-2170K17 from 2, complete sequence
          Length = 73264

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 250  tcttcttttgctgctgctgt 269
            ||||||||||||||||||||
Sbjct: 9948 tcttcttttgctgctgctgt 9967
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>dbj|AK073937.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075G21, full
            insert sequence
          Length = 2570

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 248  cttcttcttttgctgctgctgtttggttggcgatgcgatgccgttgttcgcc 299
            ||||||||||||| ||||||| ||||  || |||||| |||| ||| |||||
Sbjct: 2377 cttcttcttttgcggctgctgcttgggcggtgatgcgttgccattgctcgcc 2326
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>dbj|AK059702.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-D01, full
            insert sequence
          Length = 1547

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                
Query: 248  cttcttcttttgctgctgctgtttggttggcgatgcgatgccgttgttcgcc 299
            ||||||||||||| ||||||| ||||  || |||||| |||| ||| |||||
Sbjct: 1201 cttcttcttttgcggctgctgcttgggcggtgatgcgttgccattgctcgcc 1150
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>gb|AC135251.2| Homo sapiens 12 BAC RP11-167E10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 70387

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 64    ctctgaaacacccaacacttgctt 87
             ||||||||||| ||||||||||||
Sbjct: 39184 ctctgaaacactcaacacttgctt 39207
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>gb|AE003708.3| Drosophila melanogaster chromosome 3R, section 46 of 118 of the complete
              sequence
          Length = 236375

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 248    cttcttcttttgctgctgct 267
              ||||||||||||||||||||
Sbjct: 135604 cttcttcttttgctgctgct 135623
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>gb|AE003809.3| Drosophila melanogaster chromosome 2R, section 41 of 73 of the complete
              sequence
          Length = 262533

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 251    cttcttttgctgctgctgtt 270
              ||||||||||||||||||||
Sbjct: 192205 cttcttttgctgctgctgtt 192224
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>gb|BC087500.1| Xenopus laevis hypothetical LOC496082, mRNA (cDNA clone
           IMAGE:7204363), partial cds
          Length = 926

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 249 ttcttcttttgctgctgctgtttg 272
           |||||||| |||||||||||||||
Sbjct: 742 ttcttcttctgctgctgctgtttg 719
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>gb|AC005556.1|AC005556 Drosophila melanogaster DNA sequence (P1s DS08658 (D196) and DS00960
             (D268)), complete sequence
          Length = 98695

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 251   cttcttttgctgctgctgtt 270
             ||||||||||||||||||||
Sbjct: 75161 cttcttttgctgctgctgtt 75142
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>gb|AC147720.1| Gallus gallus BAC clone CH261-46I14 from chromosome unknown, complete
             sequence
          Length = 204711

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 252   ttcttttgctgctgctgttt 271
             ||||||||||||||||||||
Sbjct: 86340 ttcttttgctgctgctgttt 86321
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>gb|AC141892.4| Mus musculus BAC clone RP23-388J12 from 13, complete sequence
          Length = 219862

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 258    tgctgctgctgtttggttgg 277
              ||||||||||||||||||||
Sbjct: 104598 tgctgctgctgtttggttgg 104579
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>emb|AJ812006.1| Aspergillus niger sodB gene for putative manganese-containing
            superoxide dismutase, exons 1-3
          Length = 1890

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 316  cgttgctgtcgagagcggag 335
            ||||||||||||||||||||
Sbjct: 1223 cgttgctgtcgagagcggag 1204
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>emb|AL591763.14| Mouse DNA sequence from clone RP23-480D17 on chromosome 2, complete
             sequence
          Length = 153847

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   gtcacatagcatacaacaaa 174
             ||||||||||||||||||||
Sbjct: 25469 gtcacatagcatacaacaaa 25488


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,540,768
Number of Sequences: 3902068
Number of extensions: 3540768
Number of successful extensions: 75212
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74983
Number of HSP's gapped (non-prelim): 229
length of query: 360
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 338
effective length of database: 17,147,199,772
effective search space: 5795753522936
effective search space used: 5795753522936
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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