ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags15j16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_474305.1| Oryza sativa (japonica cultivar-group), predic... 252 1e-63
2dbj|AK100753.1| Oryza sativa (japonica cultivar-group) cDNA clon... 252 1e-63
3gb|BT016784.1| Zea mays clone Contig617 mRNA sequence 214 3e-52
4gb|AY104354.1| Zea mays PCO108571 mRNA sequence 214 3e-52
5emb|AL606652.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 161 4e-36
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 161 4e-36
7emb|AL732356.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 161 4e-36
8gb|DQ351282.1| Oryza rufipogon unknown gene 153 9e-34
9gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 70 1e-08
10gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 70 1e-08
11dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 64 6e-07
12gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 60 1e-05
13gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 58 4e-05
14gb|AY658425.1| Synthetic construct Peudomonas aeruginosa clone F... 54 6e-04
15gb|AE004850.1| Pseudomonas aeruginosa PAO1, section 411 of 529 o... 54 6e-04
16gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 54 6e-04
17ref|NM_111140.4| Arabidopsis thaliana hydrolase, acting on glyco... 52 0.002
18gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 52 0.002
19gb|AC018363.8|ATAC018363 Arabidopsis thaliana chromosome III BAC... 52 0.002
20gb|AC021640.7|ATAC021640 Arabidopsis thaliana chromosome III BAC... 52 0.002
21gb|BT000947.1| Arabidopsis thaliana clone C104919 unknown protei... 52 0.002
22gb|AF360323.1| Arabidopsis thaliana unknown protein (At3g02720) ... 52 0.002
23emb|BX640415.1| Bordetella pertussis strain Tohama I, complete g... 52 0.002
24emb|BX822658.1|CNS0A5YZ Arabidopsis thaliana Full-length cDNA Co... 52 0.002
25emb|BX824747.1|CNS0A5KB Arabidopsis thaliana Full-length cDNA Co... 52 0.002
26emb|BX824730.1|CNS0A5RJ Arabidopsis thaliana Full-length cDNA Co... 52 0.002
27emb|BX823752.1|CNS0A5AU Arabidopsis thaliana Full-length cDNA Co... 52 0.002
28emb|BX823263.1|CNS0A5CL Arabidopsis thaliana Full-length cDNA Co... 52 0.002
29emb|BX822838.1|CNS0A4PN Arabidopsis thaliana Full-length cDNA Co... 52 0.002
30gb|AF158699.1|AF158699 Burkholderia cepacia D-serine deaminase (... 52 0.002
31gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 50 0.010
32gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 48 0.038
33emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 46 0.15
34gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 46 0.15
35ref|XM_368328.1| Magnaporthe grisea 70-15 chromosome VI predicte... 44 0.60
36emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete ... 44 0.60
37emb|BX640426.1| Bordetella parapertussis strain 12822, complete ... 44 0.60
38gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence 42 2.4
39gb|AE009373.1| Agrobacterium tumefaciens str. C58 linear chromos... 42 2.4
40gb|AE009024.1| Agrobacterium tumefaciens str. C58 circular chrom... 42 2.4
41gb|AE008241.1| Agrobacterium tumefaciens str. C58 linear chromos... 42 2.4
42gb|AC165279.3| Mus musculus chromosome 15, clone RP23-259J10, co... 42 2.4
43gb|AC129541.15| Mus musculus chromosome 15, clone RP23-248M12, c... 42 2.4
44gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 42 2.4
45gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 42 2.4
46gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 42 2.4
47gb|AE009520.1| Brucella melitensis 16M chromosome I, section 77 ... 42 2.4
48dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 2.4
49gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I... 42 2.4
50gb|U95165.1|ATU95165 Agrobacterium tumefaciens FlaD (flaD), FlhB... 42 2.4
51gb|U39941.1|ATU39941 Agrobacterium tumefaciens flagellar gene re... 42 2.4
52emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I,... 42 2.4
53ref|NM_188637.1| Oryza sativa (japonica cultivar-group), Ozsa824... 40 9.3
54gb|AC162528.5| Mus musculus BAC clone RP23-4P1 from chromosome 5... 40 9.3
55gb|AC151577.2| Mus musculus BAC clone RP23-371D23 from chromosom... 40 9.3
56gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 9.3
57emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 9.3
58gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 9.3
59dbj|AB244625.1| Hexagrammos octogrammus genes for 18S rRNA, ITS1... 40 9.3
60gb|AC026443.4| Homo sapiens chromosome 5 clone CTD-2296H22, comp... 40 9.3
61gb|AY129331.1| Mycobacteriophage CJW1, complete genome 40 9.3
62dbj|AK019523.1| Mus musculus 0 day neonate head cDNA, RIKEN full... 40 9.3
63gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 40 9.3
64gb|AF377927.1|AF377927 Sclerotinia sclerotiorum clone 113-4 micr... 40 9.3
65emb|BX465227.3| Zebrafish DNA sequence from clone RP71-40K24 in ... 40 9.3
66dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
67dbj|AP002481.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
68emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 9.3
69gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 9.3 
>ref|XM_474305.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1164

 Score =  252 bits (127), Expect = 1e-63
 Identities = 367/447 (82%)
 Strand = Plus / Minus

                                                                        
Query: 217  gaaggagaccttgatgccgagcagggccatgagctgggccacgaactccgggtgcgcggg 276
            |||||||||||||||||| ||||  |||||||||||||  | ||||||||||||  | ||
Sbjct: 1161 gaaggagaccttgatgccaagcaatgccatgagctgggagatgaactccgggtggccagg 1102

                                                                        
Query: 277  ccacgccgcgcccgtcaccaggttgccgtcggtgaagcaacggtggatcgggtccggctc 336
            ||| |||||||| ||||| |||||||||||||||||||| ||||  || || |  |||||
Sbjct: 1101 ccatgccgcgccggtcacaaggttgccgtcggtgaagcagcggtcaatgggattgggctc 1042

                                                                        
Query: 337  cagccacgtccccccgcccagcaccacgttcagcttcaccgccgggtacgccgtgcacct 396
            |||||| ||| ||||||| ||||||||||||||||||||||| || |||||||||||  |
Sbjct: 1041 cagccatgtcgccccgccaagcaccacgttcagcttcaccgcaggatacgccgtgcattt 982

                                                                        
Query: 397  ccggccctgaagaaccccagcagcagccaggatctgctgcccgtggcagatcgacgcgac 456
            ||  |||||||| || ||||||||||  |  ||||| || || ||||| || || |||||
Sbjct: 981  ccttccctgaaggactccagcagcagataaaatctgttggccatggcaaattgaggcgac 922

                                                                        
Query: 457  cggctttccgttgtccatgaaccccttggccaggctaaggaccttctcgttcaaggcaag 516
             |||||| | || |||||||| |||||  | ||||||| ||| || |||||||  |||||
Sbjct: 921  tggctttgctttatccatgaagcccttcacaaggctaatgactttatcgttcagtgcaag 862

                                                                        
Query: 517  gtactcgggggcacgcccaccggggatcacaagcgcgtcgtagcttgaagcgtccacgcc 576
            |||||| || || || ||||| || || ||||| || || |||||||| || |||||   
Sbjct: 861  gtactcaggagcccgtccaccaggaattacaagtgcatcatagcttgatgcatccacatt 802

                                                                        
Query: 577  gtcaaacgacgcgttcagagcgaaatcatgaccaggcttctcgctgtatgtctggtcgcc 636
            |||||| || ||  ||| ||| ||||| ||||||||||||||||||||||| ||||| ||
Sbjct: 801  gtcaaatgatgctgtcaaagcaaaatcgtgaccaggcttctcgctgtatgtttggtcacc 742

                                       
Query: 637  ctcaaagtcatggatggcggttgggca 663
             ||||||||||| ||||| ||||||||
Sbjct: 741  ttcaaagtcatgtatggcagttgggca 715
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>dbj|AK100753.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118M23, full
            insert sequence
          Length = 1368

 Score =  252 bits (127), Expect = 1e-63
 Identities = 367/447 (82%)
 Strand = Plus / Minus

                                                                        
Query: 217  gaaggagaccttgatgccgagcagggccatgagctgggccacgaactccgggtgcgcggg 276
            |||||||||||||||||| ||||  |||||||||||||  | ||||||||||||  | ||
Sbjct: 1221 gaaggagaccttgatgccaagcaatgccatgagctgggagatgaactccgggtggccagg 1162

                                                                        
Query: 277  ccacgccgcgcccgtcaccaggttgccgtcggtgaagcaacggtggatcgggtccggctc 336
            ||| |||||||| ||||| |||||||||||||||||||| ||||  || || |  |||||
Sbjct: 1161 ccatgccgcgccggtcacaaggttgccgtcggtgaagcagcggtcaatgggattgggctc 1102

                                                                        
Query: 337  cagccacgtccccccgcccagcaccacgttcagcttcaccgccgggtacgccgtgcacct 396
            |||||| ||| ||||||| ||||||||||||||||||||||| || |||||||||||  |
Sbjct: 1101 cagccatgtcgccccgccaagcaccacgttcagcttcaccgcaggatacgccgtgcattt 1042

                                                                        
Query: 397  ccggccctgaagaaccccagcagcagccaggatctgctgcccgtggcagatcgacgcgac 456
            ||  |||||||| || ||||||||||  |  ||||| || || ||||| || || |||||
Sbjct: 1041 ccttccctgaaggactccagcagcagataaaatctgttggccatggcaaattgaggcgac 982

                                                                        
Query: 457  cggctttccgttgtccatgaaccccttggccaggctaaggaccttctcgttcaaggcaag 516
             |||||| | || |||||||| |||||  | ||||||| ||| || |||||||  |||||
Sbjct: 981  tggctttgctttatccatgaagcccttcacaaggctaatgactttatcgttcagtgcaag 922

                                                                        
Query: 517  gtactcgggggcacgcccaccggggatcacaagcgcgtcgtagcttgaagcgtccacgcc 576
            |||||| || || || ||||| || || ||||| || || |||||||| || |||||   
Sbjct: 921  gtactcaggagcccgtccaccaggaattacaagtgcatcatagcttgatgcatccacatt 862

                                                                        
Query: 577  gtcaaacgacgcgttcagagcgaaatcatgaccaggcttctcgctgtatgtctggtcgcc 636
            |||||| || ||  ||| ||| ||||| ||||||||||||||||||||||| ||||| ||
Sbjct: 861  gtcaaatgatgctgtcaaagcaaaatcgtgaccaggcttctcgctgtatgtttggtcacc 802

                                       
Query: 637  ctcaaagtcatggatggcggttgggca 663
             ||||||||||| ||||| ||||||||
Sbjct: 801  ttcaaagtcatgtatggcagttgggca 775
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>gb|BT016784.1| Zea mays clone Contig617 mRNA sequence
          Length = 1616

 Score =  214 bits (108), Expect = 3e-52
 Identities = 363/448 (81%)
 Strand = Plus / Minus

                                                                        
Query: 217  gaaggagaccttgatgccgagcagggccatgagctgggccacgaactccgggtgcgcggg 276
            |||||| ||||||| ||||||||  ||||||||||||| ||||||||| |||||  | ||
Sbjct: 1285 gaaggaaaccttgacgccgagcaacgccatgagctgggacacgaactctgggtggcctgg 1226

                                                                        
Query: 277  ccacgccgcgcccgtcaccaggttgccgtcggtgaagcaacggtggatcgggtccggctc 336
            ||| || ||||| ||||| |||||||| ||||||||||| |||||||||||||| |||||
Sbjct: 1225 ccaggctgcgccggtcacaaggttgccatcggtgaagcagcggtggatcgggtcaggctc 1166

                                                                        
Query: 337  cagccacgtccccccgcccagcaccacgttcagcttcaccgccgggtacgccgtgcacct 396
            |||||| ||||| || || |||| ||||||||||||||| || ||||| || |||||| |
Sbjct: 1165 cagccaggtcccgccaccgagcaacacgttcagcttcacggctgggtatgcggtgcactt 1106

                                                                        
Query: 397  ccggccctgaagaaccccagcagcagccaggatctgctgcccgtggcagatcgacgcgac 456
            |   ||||  || || || ||||| |  |  |||||||| ||||||||||||||||||| 
Sbjct: 1105 cttccccttgaggactccggcagcggataatatctgctggccgtggcagatcgacgcgat 1046

                                                                        
Query: 457  cggctttccgttgtccatgaaccccttggccaggctaaggaccttctcgttcaaggcaag 516
             ||||||||| | |||  |||  ||||  ||| ||| | |||||| |||||||  || ||
Sbjct: 1045 tggctttccgctctccgcgaaggccttcaccaagctgatgaccttatcgttcagagccag 986

                                                                        
Query: 517  gtactcgggggcacgcccaccggggatcacaagcgcgtcgtagcttgaagcgtccacgcc 576
            |||||| || || || || || || | |||||||||||||||||| ||||| ||||| | 
Sbjct: 985  gtactctggagcccgtccgccaggaaccacaagcgcgtcgtagctcgaagcatccacact 926

                                                                        
Query: 577  gtcaaacgacgcgttcagagcgaaatcatgaccaggcttctcgctgtatgtctggtcgcc 636
              ||||||||||  ||||||  ||||| || ||||||||||||||||| |||||||| ||
Sbjct: 925  tccaaacgacgctgtcagagtaaaatcgtggccaggcttctcgctgtaggtctggtcacc 866

                                        
Query: 637  ctcaaagtcatggatggcggttgggcac 664
             || || ||||| ||||| || ||||||
Sbjct: 865  ttcgaaatcatgaatggctgtcgggcac 838
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>gb|AY104354.1| Zea mays PCO108571 mRNA sequence
          Length = 1633

 Score =  214 bits (108), Expect = 3e-52
 Identities = 363/448 (81%)
 Strand = Plus / Minus

                                                                        
Query: 217  gaaggagaccttgatgccgagcagggccatgagctgggccacgaactccgggtgcgcggg 276
            |||||| ||||||| ||||||||  ||||||||||||| ||||||||| |||||  | ||
Sbjct: 1259 gaaggaaaccttgacgccgagcaacgccatgagctgggacacgaactctgggtggcctgg 1200

                                                                        
Query: 277  ccacgccgcgcccgtcaccaggttgccgtcggtgaagcaacggtggatcgggtccggctc 336
            ||| || ||||| ||||| |||||||| ||||||||||| |||||||||||||| |||||
Sbjct: 1199 ccaggctgcgccggtcacaaggttgccatcggtgaagcagcggtggatcgggtcaggctc 1140

                                                                        
Query: 337  cagccacgtccccccgcccagcaccacgttcagcttcaccgccgggtacgccgtgcacct 396
            |||||| ||||| || || |||| ||||||||||||||| || ||||| || |||||| |
Sbjct: 1139 cagccaggtcccgccaccgagcaacacgttcagcttcacggctgggtatgcggtgcactt 1080

                                                                        
Query: 397  ccggccctgaagaaccccagcagcagccaggatctgctgcccgtggcagatcgacgcgac 456
            |   ||||  || || || ||||| |  |  |||||||| ||||||||||||||||||| 
Sbjct: 1079 cttccccttgaggactccggcagcggataatatctgctggccgtggcagatcgacgcgat 1020

                                                                        
Query: 457  cggctttccgttgtccatgaaccccttggccaggctaaggaccttctcgttcaaggcaag 516
             ||||||||| | |||  |||  ||||  ||| ||| | |||||| |||||||  || ||
Sbjct: 1019 tggctttccgctctccgcgaaggccttcaccaagctgatgaccttatcgttcagagccag 960

                                                                        
Query: 517  gtactcgggggcacgcccaccggggatcacaagcgcgtcgtagcttgaagcgtccacgcc 576
            |||||| || || || || || || | |||||||||||||||||| ||||| ||||| | 
Sbjct: 959  gtactctggagcccgtccgccaggaaccacaagcgcgtcgtagctcgaagcatccacact 900

                                                                        
Query: 577  gtcaaacgacgcgttcagagcgaaatcatgaccaggcttctcgctgtatgtctggtcgcc 636
              ||||||||||  ||||||  ||||| || ||||||||||||||||| |||||||| ||
Sbjct: 899  tccaaacgacgctgtcagagtaaaatcgtggccaggcttctcgctgtaggtctggtcacc 840

                                        
Query: 637  ctcaaagtcatggatggcggttgggcac 664
             || || ||||| ||||| || ||||||
Sbjct: 839  ttcgaaatcatgaatggctgtcgggcac 812
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>emb|AL606652.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004A17,
             complete sequence
          Length = 159894

 Score =  161 bits (81), Expect = 4e-36
 Identities = 153/177 (86%)
 Strand = Plus / Plus

                                                                         
Query: 217   gaaggagaccttgatgccgagcagggccatgagctgggccacgaactccgggtgcgcggg 276
             |||||||||||||||||| ||||  |||||||||||||  | ||||||||||||  | ||
Sbjct: 26311 gaaggagaccttgatgccaagcaatgccatgagctgggagatgaactccgggtggccagg 26370

                                                                         
Query: 277   ccacgccgcgcccgtcaccaggttgccgtcggtgaagcaacggtggatcgggtccggctc 336
             ||| |||||||| ||||| |||||||||||||||||||| ||||  || || |  |||||
Sbjct: 26371 ccatgccgcgccggtcacaaggttgccgtcggtgaagcagcggtcaatgggattgggctc 26430

                                                                      
Query: 337   cagccacgtccccccgcccagcaccacgttcagcttcaccgccgggtacgccgtgca 393
             |||||| ||| ||||||| ||||||||||||||||||||||| || |||||||||||
Sbjct: 26431 cagccatgtcgccccgccaagcaccacgttcagcttcaccgcaggatacgccgtgca 26487



 Score =  107 bits (54), Expect = 5e-20
 Identities = 210/262 (80%)
 Strand = Plus / Plus

                                                                         
Query: 402   cctgaagaaccccagcagcagccaggatctgctgcccgtggcagatcgacgcgaccggct 461
             ||||||| || ||||||||||  |  ||||| || || ||||| || || ||||| ||||
Sbjct: 26951 cctgaaggactccagcagcagataaaatctgttggccatggcaaattgaggcgactggct 27010

                                                                         
Query: 462   ttccgttgtccatgaaccccttggccaggctaaggaccttctcgttcaaggcaaggtact 521
             || | || |||||||| |||||  | ||||||| ||| || |||||||  ||||||||||
Sbjct: 27011 ttgctttatccatgaagcccttcacaaggctaatgactttatcgttcagtgcaaggtact 27070

                                                                         
Query: 522   cgggggcacgcccaccggggatcacaagcgcgtcgtagcttgaagcgtccacgccgtcaa 581
             | || || || ||||| || || ||||| || || |||||||| || |||||   |||||
Sbjct: 27071 caggagcccgtccaccaggaattacaagtgcatcatagcttgatgcatccacattgtcaa 27130

                                                                         
Query: 582   acgacgcgttcagagcgaaatcatgaccaggcttctcgctgtatgtctggtcgccctcaa 641
             | || ||  ||| ||| ||||| ||||||||||||||||||||||| ||||| || ||||
Sbjct: 27131 atgatgctgtcaaagcaaaatcgtgaccaggcttctcgctgtatgtttggtcaccttcaa 27190

                                   
Query: 642   agtcatggatggcggttgggca 663
             ||||||| ||||| ||||||||
Sbjct: 27191 agtcatgtatggcagttgggca 27212
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  161 bits (81), Expect = 4e-36
 Identities = 153/177 (86%)
 Strand = Plus / Plus

                                                                            
Query: 217      gaaggagaccttgatgccgagcagggccatgagctgggccacgaactccgggtgcgcggg 276
                |||||||||||||||||| ||||  |||||||||||||  | ||||||||||||  | ||
Sbjct: 34301908 gaaggagaccttgatgccaagcaatgccatgagctgggagatgaactccgggtggccagg 34301967

                                                                            
Query: 277      ccacgccgcgcccgtcaccaggttgccgtcggtgaagcaacggtggatcgggtccggctc 336
                ||| |||||||| ||||| |||||||||||||||||||| ||||  || || |  |||||
Sbjct: 34301968 ccatgccgcgccggtcacaaggttgccgtcggtgaagcagcggtcaatgggattgggctc 34302027

                                                                         
Query: 337      cagccacgtccccccgcccagcaccacgttcagcttcaccgccgggtacgccgtgca 393
                |||||| ||| ||||||| ||||||||||||||||||||||| || |||||||||||
Sbjct: 34302028 cagccatgtcgccccgccaagcaccacgttcagcttcaccgcaggatacgccgtgca 34302084



 Score =  107 bits (54), Expect = 5e-20
 Identities = 210/262 (80%)
 Strand = Plus / Plus

                                                                            
Query: 402      cctgaagaaccccagcagcagccaggatctgctgcccgtggcagatcgacgcgaccggct 461
                ||||||| || ||||||||||  |  ||||| || || ||||| || || ||||| ||||
Sbjct: 34302548 cctgaaggactccagcagcagataaaatctgttggccatggcaaattgaggcgactggct 34302607

                                                                            
Query: 462      ttccgttgtccatgaaccccttggccaggctaaggaccttctcgttcaaggcaaggtact 521
                || | || |||||||| |||||  | ||||||| ||| || |||||||  ||||||||||
Sbjct: 34302608 ttgctttatccatgaagcccttcacaaggctaatgactttatcgttcagtgcaaggtact 34302667

                                                                            
Query: 522      cgggggcacgcccaccggggatcacaagcgcgtcgtagcttgaagcgtccacgccgtcaa 581
                | || || || ||||| || || ||||| || || |||||||| || |||||   |||||
Sbjct: 34302668 caggagcccgtccaccaggaattacaagtgcatcatagcttgatgcatccacattgtcaa 34302727

                                                                            
Query: 582      acgacgcgttcagagcgaaatcatgaccaggcttctcgctgtatgtctggtcgccctcaa 641
                | || ||  ||| ||| ||||| ||||||||||||||||||||||| ||||| || ||||
Sbjct: 34302728 atgatgctgtcaaagcaaaatcgtgaccaggcttctcgctgtatgtttggtcaccttcaa 34302787

                                      
Query: 642      agtcatggatggcggttgggca 663
                ||||||| ||||| ||||||||
Sbjct: 34302788 agtcatgtatggcagttgggca 34302809
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>emb|AL732356.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0624F09, complete
             sequence
          Length = 95419

 Score =  161 bits (81), Expect = 4e-36
 Identities = 153/177 (86%)
 Strand = Plus / Plus

                                                                         
Query: 217   gaaggagaccttgatgccgagcagggccatgagctgggccacgaactccgggtgcgcggg 276
             |||||||||||||||||| ||||  |||||||||||||  | ||||||||||||  | ||
Sbjct: 74231 gaaggagaccttgatgcctagcaatgccatgagctgggagatgaactccgggtggccagg 74290

                                                                         
Query: 277   ccacgccgcgcccgtcaccaggttgccgtcggtgaagcaacggtggatcgggtccggctc 336
             ||| |||||||| ||||| |||||||||||||||||||| ||||  || || |  |||||
Sbjct: 74291 ccatgccgcgccggtcacaaggttgccgtcggtgaagcagcggtcaatgggattgggctc 74350

                                                                      
Query: 337   cagccacgtccccccgcccagcaccacgttcagcttcaccgccgggtacgccgtgca 393
             |||||| ||| ||||||| ||||||||||||||||||||||| || |||||||||||
Sbjct: 74351 cagccatgtcgccccgccaagcaccacgttcagcttcaccgcaggatacgccgtgca 74407



 Score =  107 bits (54), Expect = 5e-20
 Identities = 210/262 (80%)
 Strand = Plus / Plus

                                                                         
Query: 402   cctgaagaaccccagcagcagccaggatctgctgcccgtggcagatcgacgcgaccggct 461
             ||||||| || ||||||||||  |  ||||| || || ||||| || || ||||| ||||
Sbjct: 74871 cctgaaggactccagcagcagataaaatctgttggccatggcaaattgaggcgactggct 74930

                                                                         
Query: 462   ttccgttgtccatgaaccccttggccaggctaaggaccttctcgttcaaggcaaggtact 521
             || | || |||||||| |||||  | ||||||| ||| || |||||||  ||||||||||
Sbjct: 74931 ttgctttatccatgaagcccttcacaaggctaatgactttatcgttcagtgcaaggtact 74990

                                                                         
Query: 522   cgggggcacgcccaccggggatcacaagcgcgtcgtagcttgaagcgtccacgccgtcaa 581
             | || || || ||||| || || ||||| || || |||||||| || |||||   |||||
Sbjct: 74991 caggagcccgtccaccaggaattacaagtgcatcatagcttgatgcatccacattgtcaa 75050

                                                                         
Query: 582   acgacgcgttcagagcgaaatcatgaccaggcttctcgctgtatgtctggtcgccctcaa 641
             | || ||  ||| ||| ||||| ||||||||||||||||||||||| ||||| || ||||
Sbjct: 75051 atgatgctgtcaaagcaaaatcgtgaccaggcttctcgctgtatgtttggtcaccttcaa 75110

                                   
Query: 642   agtcatggatggcggttgggca 663
             ||||||| ||||| ||||||||
Sbjct: 75111 agtcatgtatggcagttgggca 75132
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>gb|DQ351282.1| Oryza rufipogon unknown gene
          Length = 14907

 Score =  153 bits (77), Expect = 9e-34
 Identities = 152/177 (85%)
 Strand = Plus / Plus

                                                                        
Query: 217  gaaggagaccttgatgccgagcagggccatgagctgggccacgaactccgggtgcgcggg 276
            |||||||||||||||||| ||||  |||||||||||||  | ||||||||||||  | ||
Sbjct: 9500 gaaggagaccttgatgccaagcaatgccatgagctgggagatgaactccgggtggccagg 9559

                                                                        
Query: 277  ccacgccgcgcccgtcaccaggttgccgtcggtgaagcaacggtggatcgggtccggctc 336
            ||| |||||||| ||||| |||||||||||||||||||| ||||  || || |  |||||
Sbjct: 9560 ccatgccgcgccggtcacaaggttgccgtcggtgaagcagcggtcaatgggattgggctc 9619

                                                                     
Query: 337  cagccacgtccccccgcccagcaccacgttcagcttcaccgccgggtacgccgtgca 393
            |||||| ||| ||||||| ||||||||||| ||||||||||| || |||||||||||
Sbjct: 9620 cagccatgtcgccccgccaagcaccacgttgagcttcaccgcaggatacgccgtgca 9676



 Score =  107 bits (54), Expect = 5e-20
 Identities = 210/262 (80%)
 Strand = Plus / Plus

                                                                         
Query: 402   cctgaagaaccccagcagcagccaggatctgctgcccgtggcagatcgacgcgaccggct 461
             ||||||| || ||||||||||  |  ||||| || || ||||| || || ||||| ||||
Sbjct: 10136 cctgaaggactccagcagcagataaaatctgttggccatggcaaattgaggcgactggct 10195

                                                                         
Query: 462   ttccgttgtccatgaaccccttggccaggctaaggaccttctcgttcaaggcaaggtact 521
             || | || |||||||| |||||  | ||||||| ||| || |||||||  ||||||||||
Sbjct: 10196 ttgctttatccatgaagcccttcacaaggctaatgactttatcgttcagtgcaaggtact 10255

                                                                         
Query: 522   cgggggcacgcccaccggggatcacaagcgcgtcgtagcttgaagcgtccacgccgtcaa 581
             | || || || ||||| || || ||||| || || |||||||| || |||||   |||||
Sbjct: 10256 caggagcccgtccaccaggaattacaagtgcatcatagcttgatgcatccacattgtcaa 10315

                                                                         
Query: 582   acgacgcgttcagagcgaaatcatgaccaggcttctcgctgtatgtctggtcgccctcaa 641
             | || ||  ||| ||| ||||| ||||||||||||||||||||||| ||||| || ||||
Sbjct: 10316 atgatgctgtcaaagcaaaatcgtgaccaggcttctcgctgtatgtttggtcaccttcaa 10375

                                   
Query: 642   agtcatggatggcggttgggca 663
             ||||||| ||||| ||||||||
Sbjct: 10376 agtcatgtatggcagttgggca 10397
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 116/143 (81%)
 Strand = Plus / Minus

                                                                           
Query: 515     aggtactcgggggcacgcccaccggggatcacaagcgcgtcgtagcttgaagcgtccacg 574
               ||||| ||||||||||| || || | |||| | |||||||||||||  || ||||| |||
Sbjct: 3214235 aggtattcgggggcacggccgcccgcgatcgcgagcgcgtcgtagcgcgatgcgtcgacg 3214176

                                                                           
Query: 575     ccgtcaaacgacgcgttcagagcgaaatcatgaccaggcttctcgctgtatgtctggtcg 634
                |||| |||| ||||||||| | ||| |  || || ||||||||| |||| |||||||||
Sbjct: 3214175 tcgtcgaacgccgcgttcagcgtgaactggtggccgggcttctcggtgtaggtctggtcg 3214116

                                      
Query: 635     ccctcaaagtcatggatggcggt 657
               || || || |||||||| |||||
Sbjct: 3214115 ccttcgaaatcatggatcgcggt 3214093
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 44/47 (93%)
 Strand = Plus / Plus

                                                            
Query: 611   ggcttctcgctgtatgtctggtcgccctcaaagtcatggatggcggt 657
             |||||||||||||| ||||||||||| ||||| ||||||||||||||
Sbjct: 30204 ggcttctcgctgtaggtctggtcgccttcaaaatcatggatggcggt 30250
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 41/44 (93%)
 Strand = Plus / Minus

                                                           
Query: 611     ggcttctcgctgtatgtctggtcgccctcaaagtcatggatggc 654
               |||||||||||||| ||||||||||| |||||||| ||||||||
Sbjct: 1539023 ggcttctcgctgtaggtctggtcgccttcaaagtcgtggatggc 1538980



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                           
Query: 515     aggtactcgggggcacgcccaccggggatcacaagcgcgtcgta 558
               ||||||||||| || || || || |||||||| |||||||||||
Sbjct: 1539119 aggtactcgggcgcccgtccgccagggatcaccagcgcgtcgta 1539076
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                            
Query: 612    gcttctcgctgtatgtctggtcgccctcaaagtcatggatggcggt 657
              ||||||||||||| |||||||||||||| ||||| ||||| |||||
Sbjct: 407560 gcttctcgctgtacgtctggtcgccctcgaagtcgtggatcgcggt 407515



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 358     caccacgttcagcttcaccg 377
               ||||||||||||||||||||
Sbjct: 2092513 caccacgttcagcttcaccg 2092494



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 349    cccgcccagcaccacgttca 368
              ||||||||||||||||||||
Sbjct: 348392 cccgcccagcaccacgttca 348411
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                    
Query: 605     tgaccaggcttctcgctgtatgtctggtcgccctcaaagtcatggatggcggt 657
               ||||| || ||||||||||| ||||| ||||| |||||||||||||| |||||
Sbjct: 1479972 tgaccgggtttctcgctgtaggtctgatcgccttcaaagtcatggatcgcggt 1479920
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>gb|AY658425.1| Synthetic construct Peudomonas aeruginosa clone FLH036066.01F
           PA4336 gene, partial cds
          Length = 585

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                          
Query: 611 ggcttctcgctgtatgtctggtcgccctcaaagtcatggatggcggt 657
           |||||||||||||| ||||||||||| || || || |||||||||||
Sbjct: 191 ggcttctcgctgtaggtctggtcgccttcgaaatcgtggatggcggt 145
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>gb|AE004850.1| Pseudomonas aeruginosa PAO1, section 411 of 529 of the complete
           genome
          Length = 10036

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 611 ggcttctcgctgtatgtctggtcgccctcaaagtcatggatggcggt 657
           |||||||||||||| ||||||||||| || || || |||||||||||
Sbjct: 822 ggcttctcgctgtaggtctggtcgccttcgaaatcgtggatggcggt 868
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                             
Query: 611    ggcttctcgctgtatgtctggtcgccctcaaagtcatggatggcggt 657
              ||||| ||| |||| |||||||||||||||||||| ||||| |||||
Sbjct: 576180 ggcttttcggtgtaggtctggtcgccctcaaagtcgtggatcgcggt 576134
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>ref|NM_111140.4| Arabidopsis thaliana hydrolase, acting on glycosyl bonds AT3G02720
           mRNA, complete cds
          Length = 1415

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 614 ttctcgctgtatgtctggtcgccctcaaagtcatggatggcggttgggca 663
           ||||| ||||| || ||||| ||||||||||||||||| || ||||||||
Sbjct: 840 ttctcactgtaagtttggtcaccctcaaagtcatggattgcagttgggca 791
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                            
Query: 612    gcttctcgctgtatgtctggtcgccctcaaagtcatggatggcggt 657
              |||||||  |||| ||||||||||| || |||||||||||||||||
Sbjct: 326359 gcttctccgtgtaggtctggtcgccttcgaagtcatggatggcggt 326404
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>gb|AC018363.8|ATAC018363 Arabidopsis thaliana chromosome III BAC F13E7 genomic sequence,
             complete sequence
          Length = 100559

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                               
Query: 614   ttctcgctgtatgtctggtcgccctcaaagtcatggatggcggttgggca 663
             ||||| ||||| || ||||| ||||||||||||||||| || ||||||||
Sbjct: 98737 ttctcactgtaagtttggtcaccctcaaagtcatggattgcagttgggca 98786
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>gb|AC021640.7|ATAC021640 Arabidopsis thaliana chromosome III BAC F16B3 genomic sequence, complete
              sequence
          Length = 103904

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                
Query: 614    ttctcgctgtatgtctggtcgccctcaaagtcatggatggcggttgggca 663
              ||||| ||||| || ||||| ||||||||||||||||| || ||||||||
Sbjct: 103215 ttctcactgtaagtttggtcaccctcaaagtcatggattgcagttgggca 103166
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>gb|BT000947.1| Arabidopsis thaliana clone C104919 unknown protein (At3g02720)
           mRNA, complete cds
          Length = 1198

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 614 ttctcgctgtatgtctggtcgccctcaaagtcatggatggcggttgggca 663
           ||||| ||||| || ||||| ||||||||||||||||| || ||||||||
Sbjct: 767 ttctcactgtaagtttggtcaccctcaaagtcatggattgcagttgggca 718
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>gb|AF360323.1| Arabidopsis thaliana unknown protein (At3g02720) mRNA, partial cds
          Length = 1269

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 614 ttctcgctgtatgtctggtcgccctcaaagtcatggatggcggttgggca 663
           ||||| ||||| || ||||| ||||||||||||||||| || ||||||||
Sbjct: 576 ttctcactgtaagtttggtcaccctcaaagtcatggattgcagttgggca 527
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>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12
          Length = 347071

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                            
Query: 264    ccgggtgcgcgggccacgccgcgcccgtcaccaggttgccgtcggt 309
              |||| |||||||||||||||| | | || |||||||||||||||||
Sbjct: 229168 ccggatgcgcgggccacgccggggcggtgaccaggttgccgtcggt 229123
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>emb|BX822658.1|CNS0A5YZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB56ZG12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1427

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 614 ttctcgctgtatgtctggtcgccctcaaagtcatggatggcggttgggca 663
           ||||| ||||| || ||||| ||||||||||||||||| || ||||||||
Sbjct: 837 ttctcactgtaagtttggtcaccctcaaagtcatggattgcagttgggca 788
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>emb|BX824747.1|CNS0A5KB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH6ZD07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1415

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 614 ttctcgctgtatgtctggtcgccctcaaagtcatggatggcggttgggca 663
           ||||| ||||| || ||||| ||||||||||||||||| || ||||||||
Sbjct: 821 ttctcactgtaagtttggtcaccctcaaagtcatggattgcagttgggca 772
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>emb|BX824730.1|CNS0A5RJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH68ZF02 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1386

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 614 ttctcgctgtatgtctggtcgccctcaaagtcatggatggcggttgggca 663
           ||||| ||||| || ||||| ||||||||||||||||| || ||||||||
Sbjct: 840 ttctcactgtaagtttggtcaccctcaaagtcatggattgcagttgggca 791
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>emb|BX823752.1|CNS0A5AU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS72ZB03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1376

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 614 ttctcgctgtatgtctggtcgccctcaaagtcatggatggcggttgggca 663
           ||||| ||||| || ||||| ||||||||||||||||| || ||||||||
Sbjct: 834 ttctcactgtaagtttggtcaccctcaaagtcatggattgcagttgggca 785
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>emb|BX823263.1|CNS0A5CL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS18ZD04 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1365

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 614 ttctcgctgtatgtctggtcgccctcaaagtcatggatggcggttgggca 663
           ||||| ||||| || ||||| ||||||||||||||||| || ||||||||
Sbjct: 792 ttctcactgtaagtttggtcaccctcaaagtcatggattgcagttgggca 743
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>emb|BX822838.1|CNS0A4PN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB68ZA03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1382

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 614 ttctcgctgtatgtctggtcgccctcaaagtcatggatggcggttgggca 663
           ||||| ||||| || ||||| ||||||||||||||||| || ||||||||
Sbjct: 822 ttctcactgtaagtttggtcaccctcaaagtcatggattgcagttgggca 773
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>gb|AF158699.1|AF158699 Burkholderia cepacia D-serine deaminase (dsd), marR homolog, and
            major facilitator superfamily  transporter homolog (ORFD)
            genes, complete cds; and unknown gene
          Length = 5527

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 89/110 (80%)
 Strand = Plus / Minus

                                                                        
Query: 548  agcgcgtcgtagcttgaagcgtccacgccgtcaaacgacgcgttcagagcgaaatcatga 607
            |||||||||||||  || ||||| ||| |||| |||| ||| ||||| | ||| |  || 
Sbjct: 2243 agcgcgtcgtagcgcgacgcgtcgacgtcgtcgaacgtcgcattcagcgtgaactggtgg 2184

                                                              
Query: 608  ccaggcttctcgctgtatgtctggtcgccctcaaagtcatggatggcggt 657
            || ||||||||| |||| |||||||||||||| || || ||||| |||||
Sbjct: 2183 ccgggcttctcggtgtaggtctggtcgccctcgaaatcgtggatcgcggt 2134
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 50.1 bits (25), Expect = 0.010
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                        
Query: 611     ggcttctcgctgtatgtctggtcgccctcaaagtcatggat 651
               ||||| |||||||| |||||||||||||| ||||| |||||
Sbjct: 1536710 ggcttttcgctgtaggtctggtcgccctcgaagtcgtggat 1536670



 Score = 42.1 bits (21), Expect = 2.4
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                           
Query: 494     aggaccttctcgttcaaggcaaggtactcgggggcacgcccaccggggatcacaagcgcg 553
               |||||||| ||||||| |   ||||| || |||||||| |||||||||||||  || |||
Sbjct: 1536827 aggaccttttcgttcaggcgcaggtattccggggcacggccaccggggatcagcagggcg 1536768

                    
Query: 554     tcgta 558
               |||||
Sbjct: 1536767 tcgta 1536763
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                           
Query: 605     tgaccaggcttctcgctgtatgtctggtcgccctcaaagtcatg 648
               |||||||||||||||   |||||||| |||||||| ||||||||
Sbjct: 1043891 tgaccaggcttctcggaatatgtctgatcgccctcgaagtcatg 1043848
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                              
Query: 611     ggcttctcgctgtatgtctggtcgccctcaaagtcatggatggcggt 657
               |||||||||||||| ||||| ||||| ||||| || ||||| |||||
Sbjct: 1193832 ggcttctcgctgtaggtctgttcgccttcaaaatcgtggatcgcggt 1193786



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                               
Query: 515     aggtactcgggggcacgcccaccggggatcacaagcgcgtcgtagctt 562
               ||||| ||||| || || ||||| |||||||  |||||||||||||||
Sbjct: 1193928 aggtattcgggcgcccggccacctgggatcaacagcgcgtcgtagctt 1193881
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 95/119 (79%)
 Strand = Plus / Plus

                                                                          
Query: 518    tactcgggggcacgcccaccggggatcacaagcgcgtcgtagcttgaagcgtccacgccg 577
              |||||||| ||||| || || | |||| | ||||||||||||| ||  ||||| ||| ||
Sbjct: 617990 tactcgggcgcacggccgcccgcgatcgcgagcgcgtcgtagcctgtcgcgtcgacgtcg 618049

                                                                         
Query: 578    tcaaacgacgcgttcagagcgaaatcatgaccaggcttctcgctgtatgtctggtcgcc 636
              || |||| ||||||||| | ||| |  || || ||||| ||| |||| |||||||||||
Sbjct: 618050 tcgaacgtcgcgttcagcgtgaactggtggccgggcttttcggtgtaggtctggtcgcc 618108
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>ref|XM_368328.1| Magnaporthe grisea 70-15 chromosome VI predicted protein
           (MG00916.4) partial mRNA
          Length = 378

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 234 cgagcagggccatgagctgggc 255
           ||||||||||||||||||||||
Sbjct: 40  cgagcagggccatgagctgggc 19
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>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16
          Length = 348624

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                            
Query: 264    ccgggtgcgcgggccacgccgcgcccgtcaccaggttgccgtcggt 309
              |||| ||||||||||| |||| | | || |||||||||||||||||
Sbjct: 133200 ccggatgcgcgggccatgccggggcggtgaccaggttgccgtcggt 133155
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>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14
          Length = 348866

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                            
Query: 264    ccgggtgcgcgggccacgccgcgcccgtcaccaggttgccgtcggt 309
              |||| ||||||||||| |||| | | || |||||||||||||||||
Sbjct: 245570 ccggatgcgcgggccatgccggggcggtgaccaggttgccgtcggt 245525
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>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence
          Length = 2107794

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                                
Query: 611     ggcttctcgctgtatgtctggtcgccctcaaagtcatggatggcggttg 659
               ||||||||| | || ||||| | |||||||||||| || ||||||||||
Sbjct: 1173057 ggcttctcggtataggtctgatggccctcaaagtcgtgaatggcggttg 1173009
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>gb|AE009373.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 143 of
            187 of the complete sequence
          Length = 13358

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 626  gtctggtcgccctcaaagtcatggatggc 654
            |||||||||||||| || |||||||||||
Sbjct: 3613 gtctggtcgccctcgaaatcatggatggc 3585
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>gb|AE009024.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 50 of
            256 of the complete sequence
          Length = 10029

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 288  ccgtcaccaggttgccgtcgg 308
            |||||||||||||||||||||
Sbjct: 4752 ccgtcaccaggttgccgtcgg 4772
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>gb|AE008241.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 45 of
            187 of the complete sequence
          Length = 10465

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 626  gtctggtcgccctcaaagtcatggatggc 654
            |||||||||||||| || |||||||||||
Sbjct: 6853 gtctggtcgccctcgaaatcatggatggc 6881
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>gb|AC165279.3| Mus musculus chromosome 15, clone RP23-259J10, complete sequence
          Length = 176055

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 647   tggatggcggttgggcacttg 667
             |||||||||||||||||||||
Sbjct: 61567 tggatggcggttgggcacttg 61547
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>gb|AC129541.15| Mus musculus chromosome 15, clone RP23-248M12, complete sequence
          Length = 197803

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 647  tggatggcggttgggcacttg 667
            |||||||||||||||||||||
Sbjct: 2567 tggatggcggttgggcacttg 2547
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                          
Query: 612    gcttctcgctgtatgtctggtcgccctcaaagtcatggatggcggttgggcacttgtcgc 671
              |||| ||| |||| ||||||||||| || ||||| |||||||| || | ||| |||||||
Sbjct: 392364 gcttttcggtgtaggtctggtcgccttcgaagtcgtggatggccgtggcgcagttgtcgc 392423

               
Query: 672    c 672
              |
Sbjct: 392424 c 392424
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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 288    ccgtcaccaggttgccgtcgg 308
              |||||||||||||||||||||
Sbjct: 540114 ccgtcaccaggttgccgtcgg 540134
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 626     gtctggtcgccctcaaagtcatggatggc 654
               ||||||||||||||||| || ||||||||
Sbjct: 1077764 gtctggtcgccctcaaaatcgtggatggc 1077736
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>gb|AE009520.1| Brucella melitensis 16M chromosome I, section 77 of 195 of the
            complete sequence
          Length = 10543

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                             
Query: 611  ggcttctcgctgtatgtctggtcgccctcaaagtcatggatggcggttg 659
            ||||||||| | || ||||| | |||||||||||| || ||||||||||
Sbjct: 8414 ggcttctcggtataggtctgatggccctcaaagtcgtgaatggcggttg 8462
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                        
Query: 437     ccgtggcagatcgacgcgaccggctttccgttgtccatgaa 477
               |||||||||||||| |||||||| || ||| || |||||||
Sbjct: 8623003 ccgtggcagatcgatgcgaccggtttcccgctggccatgaa 8623043
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>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence
          Length = 2124241

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                                
Query: 611     ggcttctcgctgtatgtctggtcgccctcaaagtcatggatggcggttg 659
               ||||||||| | || ||||| | |||||||||||| || ||||||||||
Sbjct: 1191165 ggcttctcggtataggtctgatggccctcaaagtcgtgaatggcggttg 1191117
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>gb|U95165.1|ATU95165 Agrobacterium tumefaciens FlaD (flaD), FlhB (flhB), FliG (fliG), FliN
             (fliN), FliM (fliM), MotA (motA), FlgF (flgF), FliI
             (fliI), FlgB (flgB), FlgC (flgC), FliE (fliE), FlgG
             (flgG), FlgA (flgA), FlgI (flgI), FlgH (flgH), FliL
             (fliL), FliP (fliP), FlaA (flaA), FlaB (flaB) and FlaC
             (flaC) genes, complete cds
          Length = 21846

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 288   ccgtcaccaggttgccgtcgg 308
             |||||||||||||||||||||
Sbjct: 12891 ccgtcaccaggttgccgtcgg 12871
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>gb|U39941.1|ATU39941 Agrobacterium tumefaciens flagellar gene region, flagellar basal body
            components (flgB, flgC, fliE, flgG), P-ring subunit
            (flgI), L-ring subunit (flgH), and FliP (fliP) genes,
            complete cds
          Length = 7205

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 288  ccgtcaccaggttgccgtcgg 308
            |||||||||||||||||||||
Sbjct: 2299 ccgtcaccaggttgccgtcgg 2279
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>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain
               2308
          Length = 2121359

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                                
Query: 611     ggcttctcgctgtatgtctggtcgccctcaaagtcatggatggcggttg 659
               ||||||||| | || ||||| | |||||||||||| || ||||||||||
Sbjct: 1188316 ggcttctcggtataggtctgatggccctcaaagtcgtgaatggcggttg 1188268
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>ref|NM_188637.1| Oryza sativa (japonica cultivar-group), Ozsa8240 predicted mRNA
          Length = 1671

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 271 cgcgggccacgccgcgcccg 290
           ||||||||||||||||||||
Sbjct: 186 cgcgggccacgccgcgcccg 167
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>gb|AC162528.5| Mus musculus BAC clone RP23-4P1 from chromosome 5, complete sequence
          Length = 219218

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 238    cagggccatgagctgggcca 257
              ||||||||||||||||||||
Sbjct: 123528 cagggccatgagctgggcca 123509
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>gb|AC151577.2| Mus musculus BAC clone RP23-371D23 from chromosome 5, complete sequence
          Length = 206735

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 238    cagggccatgagctgggcca 257
              ||||||||||||||||||||
Sbjct: 149931 cagggccatgagctgggcca 149950
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 279     acgccgcgcccgtcaccaggttgc 302
               |||||||||||||||| |||||||
Sbjct: 2199666 acgccgcgcccgtcacgaggttgc 2199643
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 279    acgccgcgcccgtcaccaggttgc 302
              |||||||||||||||| |||||||
Sbjct: 361289 acgccgcgcccgtcacgaggttgc 361266
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 234    cgagcagggccatgagctgggcca 257
              ||||||||||| ||||||||||||
Sbjct: 206260 cgagcagggccttgagctgggcca 206283
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>dbj|AB244625.1| Hexagrammos octogrammus genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2,
            28S rRNA
          Length = 1217

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 266  gggtgcgcgggccacgccgc 285
            ||||||||||||||||||||
Sbjct: 1125 gggtgcgcgggccacgccgc 1144
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>gb|AC026443.4| Homo sapiens chromosome 5 clone CTD-2296H22, complete sequence
          Length = 118562

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 157   gttgcatctgtgttgtatat 176
             ||||||||||||||||||||
Sbjct: 42582 gttgcatctgtgttgtatat 42563
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>gb|AY129331.1| Mycobacteriophage CJW1, complete genome
          Length = 75931

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 246   tgagctgggccacgaactcc 265
             ||||||||||||||||||||
Sbjct: 28815 tgagctgggccacgaactcc 28796
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>dbj|AK019523.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched
            library, clone:4833439F03 product:unclassifiable, full
            insert sequence
          Length = 2472

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 238  cagggccatgagctgggcca 257
            ||||||||||||||||||||
Sbjct: 1144 cagggccatgagctgggcca 1125
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 279     acgccgcgcccgtcaccaggttgc 302
               |||||||||||||||| |||||||
Sbjct: 1626998 acgccgcgcccgtcacgaggttgc 1627021
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>gb|AF377927.1|AF377927 Sclerotinia sclerotiorum clone 113-4 microsatellite sequence
          Length = 394

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 165 tgtgttgtatatcatgtgatgaaa 188
           ||||||||||||||||||| ||||
Sbjct: 238 tgtgttgtatatcatgtgaagaaa 215
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>emb|BX465227.3| Zebrafish DNA sequence from clone RP71-40K24 in linkage group 17,
             complete sequence
          Length = 161395

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 154   tatgttgcatctgtgttgta 173
             ||||||||||||||||||||
Sbjct: 93637 tatgttgcatctgtgttgta 93656
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 271     cgcgggccacgccgcgcccg 290
               ||||||||||||||||||||
Sbjct: 7356392 cgcgggccacgccgcgcccg 7356411
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>dbj|AP002481.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0702F03
          Length = 141111

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 271   cgcgggccacgccgcgcccg 290
             ||||||||||||||||||||
Sbjct: 17420 cgcgggccacgccgcgcccg 17439
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 336     ccagccacgtccccccgcccagcaccac 363
               ||||||||||| || |||||||||||||
Sbjct: 1928249 ccagccacgtcaccgcgcccagcaccac 1928222



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 290    gtcaccaggttgccgtcggt 309
              ||||||||||||||||||||
Sbjct: 443688 gtcaccaggttgccgtcggt 443707
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                       
Query: 264     ccgggtgcgcgggccacgccgcgcccgtcaccaggttgcc 303
               |||||||||||||||| ||||   | ||||||||||||||
Sbjct: 1035702 ccgggtgcgcgggccatgccggtgcggtcaccaggttgcc 1035663


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,743,828
Number of Sequences: 3902068
Number of extensions: 4743828
Number of successful extensions: 86046
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 84050
Number of HSP's gapped (non-prelim): 2004
length of query: 681
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 658
effective length of database: 17,143,297,704
effective search space: 11280289889232
effective search space used: 11280289889232
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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