ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags15j13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_474147.1| Oryza sativa (japonica cultivar-group), predic... 115 2e-22
2emb|AL606690.3|OSJN00080 Oryza sativa genomic DNA, chromosome 4,... 115 2e-22
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 115 2e-22
4emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4,... 115 2e-22
5gb|AC138116.4| Mus musculus BAC clone RP24-242H5 from chromosome... 46 0.13
6gb|AC134420.8| Mus musculus chromosome 15, clone RP23-478J5, com... 46 0.13
7emb|AL121899.37|HSBA128M1 Human DNA sequence from clone RP11-128... 42 2.0
8gb|AC093499.2| Drosophila melanogaster 3L BAC RP98-18K24 (Roswel... 42 2.0
9gb|AC016493.14| Homo sapiens chromosome 18, clone RP11-58G13, co... 42 2.0
10gb|AC008901.5|AC008901 Homo sapiens chromosome 5 clone CTD-2245E... 42 2.0
11gb|AE003529.3| Drosophila melanogaster chromosome 3L, section 56... 42 2.0
12emb|CT486002.9| Mouse DNA sequence from clone RP23-396G8 on chro... 42 2.0
13emb|AL732478.7| Mouse DNA sequence from clone RP23-42N14 on chro... 42 2.0
14gb|M61127.1|DROAFLL Drosophila melanogaster GTP-binding protein ... 42 2.0
15gb|AC011757.12| Drosophila melanogaster clone BACR13E23, complet... 40 8.1
16gb|AC138318.7| Mus musculus chromosome 3, clone RP23-358I23, com... 40 8.1
17gb|AC115046.7| Mus musculus chromosome 5, clone RP24-321O4, comp... 40 8.1
18gb|AC122289.2| Mus musculus BAC clone RP23-254F12 from 3, comple... 40 8.1
19gb|AC006204.1| Homo sapiens PAC clone RP5-1102B4 from 7, complet... 40 8.1
20gb|U55854.2| Caenorhabditis elegans cosmid C04G6, complete sequence 40 8.1
21emb|AL353573.10| Human DNA sequence from clone RP11-550E18 on ch... 40 8.1
22gb|BC055052.1| Mus musculus cDNA clone IMAGE:6493732, partial cds 40 8.1
23emb|AL118510.6|HSJ858M22 Human DNA sequence from clone RP5-858M2... 40 8.1
24gb|AF450278.1| Vitis vinifera floricaula/leafy-like protein gene... 40 8.1
25gb|AC090587.10| Homo sapiens chromosome 11, clone RP11-348A20, c... 40 8.1
26gb|DQ118863.1| Streptomyces fradiae strain NRRL18158 lipopeptide... 40 8.1
27emb|CR769774.8| Zebrafish DNA sequence from clone DKEY-149I17 in... 40 8.1
28gb|AE012019.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 8.1
29gb|AC099666.2| Homo sapiens chromosome 3 clone RP11-215K24, comp... 40 8.1
30gb|AC012047.8| Homo sapiens chromosome 10 clone RP11-423F10, com... 40 8.1
31gb|AC090971.3| Homo sapiens chromosome 15 clone RP11-56B16 map 1... 40 8.1
32ref|NM_062538.3| Caenorhabditis elegans PhosphoLipase D family m... 40 8.1
33gb|AC158332.1| Homo sapiens chromosome 20 clone WI2-3439N14, com... 40 8.1
34gb|AC007383.4| Homo sapiens BAC clone RP11-310K15 from 2, comple... 40 8.1
35gb|AC060812.15| Homo sapiens chromosome 11, clone RP11-120E20, c... 40 8.1
36ref|XM_224510.3| PREDICTED: Rattus norvegicus similar to CG10084... 40 8.1
37gb|AC140183.2| Mus musculus BAC clone RP24-350N4 from chromosome... 40 8.1
38dbj|AK024511.1| Homo sapiens cDNA: FLJ20858 fis, clone ADKA01561 40 8.1
39gb|AE002603.3| Drosophila melanogaster chromosome 2L, section 83... 40 8.1
40gb|BC082039.1| Rattus norvegicus similar to CG10084-PA, mRNA (cD... 40 8.1
41dbj|AP003471.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 8.1
42dbj|AP002847.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 8.1
43gb|CP000221.1| Drosophila melanogaster genomic scaffold 21100002... 40 8.1
44gb|CP000215.1| Drosophila melanogaster genomic scaffold 21100002... 40 8.1
45gb|CP000174.1| Drosophila melanogaster genomic scaffold 21100002... 40 8.1
46gb|CP000173.1| Drosophila melanogaster genomic scaffold 21100002... 40 8.1
47gb|AC122426.5| Mus musculus BAC clone RP24-174I4 from 9, complet... 40 8.1
48emb|AL808103.8| Mouse DNA sequence from clone RP23-301G2 on chro... 40 8.1
49dbj|AB028889.1| Caenorhabditis elegans PLD mRNA for phospholipas... 40 8.1 
>ref|XM_474147.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1611

 Score =  115 bits (58), Expect = 2e-22
 Identities = 142/170 (83%)
 Strand = Plus / Minus

                                                                        
Query: 236  agtatgtacatgacccatatgtggaggcacaccaggtacaccgcggccccgacctgcgcc 295
            |||||||||| |||||||||||||||||||||||||||||||  |||||  ||  |||||
Sbjct: 1532 agtatgtacaggacccatatgtggaggcacaccaggtacaccatggcccaaactagcgcc 1473

                                                                        
Query: 296  ttcggattcctacgcaggaagatgtgaccggccgagaagatggagtcgagctgccgtatc 355
            || |||||||  | || |||||| || || || ||||||||||| |||||||| || || 
Sbjct: 1472 ttaggattccgcctcaagaagatatggccagcggagaagatggaatcgagctgtcggatt 1413

                                                              
Query: 356  gcgtatcccaggtgctgcttcccactccgtatcctgtcacgcagccttgg 405
            ||  ||||||| ||| |||  ||| |||||||||||||||||| ||||||
Sbjct: 1412 gccgatcccagttgccgctgtccattccgtatcctgtcacgcaaccttgg 1363



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 143/175 (81%), Gaps = 3/175 (1%)
 Strand = Plus / Minus

                                                                        
Query: 424  tgattcttgccatgtaccggcctcgatgtctatcctcgacgacgagcttgaagacgccag 483
            |||||||||||||||||| || ||||| |||||| | ||||| ||||| ||| | |||| 
Sbjct: 1356 tgattcttgccatgtaccagcttcgatatctatctttgacgaggagctcgaataagccaa 1297

                                                                        
Query: 484  cgacgagg---cgttggtgtcgagcaacctcgaaacggcctccattctcagtaccaaagt 540
            ||| || |   ||||  |||| ||| | || ||||| ||||| |||||||||| ||| | 
Sbjct: 1296 cgatgatgatccgttattgtcaagcgatcttgaaactgcctctattctcagtaacaaggc 1237

                                                                   
Query: 541  tgacttctctgaagacagggactcaacctgcatttgtttctgaatcaaccgatca 595
            ||  ||||||||||| ||||||||||||||||| ||||||||||| || ||||||
Sbjct: 1236 tgctttctctgaagagagggactcaacctgcatctgtttctgaattaaacgatca 1182
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>emb|AL606690.3|OSJN00080 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060D06,
             complete sequence
          Length = 151506

 Score =  115 bits (58), Expect = 2e-22
 Identities = 142/170 (83%)
 Strand = Plus / Plus

                                                                         
Query: 236   agtatgtacatgacccatatgtggaggcacaccaggtacaccgcggccccgacctgcgcc 295
             |||||||||| |||||||||||||||||||||||||||||||  |||||  ||  |||||
Sbjct: 32056 agtatgtacaggacccatatgtggaggcacaccaggtacaccatggcccaaactagcgcc 32115

                                                                         
Query: 296   ttcggattcctacgcaggaagatgtgaccggccgagaagatggagtcgagctgccgtatc 355
             || |||||||  | || |||||| || || || ||||||||||| |||||||| || || 
Sbjct: 32116 ttaggattccgcctcaagaagatatggccagcggagaagatggaatcgagctgtcggatt 32175

                                                               
Query: 356   gcgtatcccaggtgctgcttcccactccgtatcctgtcacgcagccttgg 405
             ||  ||||||| ||| |||  ||| |||||||||||||||||| ||||||
Sbjct: 32176 gccgatcccagttgccgctgtccattccgtatcctgtcacgcaaccttgg 32225



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                 
Query: 519   cctccattctcagtaccaaagttgacttctctgaagacagggactcaacctg 570
             |||| |||||||||| ||| | ||  ||||||||||| ||||||||||||||
Sbjct: 32432 cctctattctcagtaacaaggctgctttctctgaagagagggactcaacctg 32483



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                             
Query: 424   tgattcttgccatgtaccggcctcgatgtctatcctcgacgacgagct 471
             |||||||||||||||||| || ||||| |||||| | ||||| |||||
Sbjct: 32232 tgattcttgccatgtaccagcttcgatatctatctttgacgaggagct 32279
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  115 bits (58), Expect = 2e-22
 Identities = 142/170 (83%)
 Strand = Plus / Plus

                                                                            
Query: 236      agtatgtacatgacccatatgtggaggcacaccaggtacaccgcggccccgacctgcgcc 295
                |||||||||| |||||||||||||||||||||||||||||||  |||||  ||  |||||
Sbjct: 33259795 agtatgtacaggacccatatgtggaggcacaccaggtacaccatggcccaaactagcgcc 33259854

                                                                            
Query: 296      ttcggattcctacgcaggaagatgtgaccggccgagaagatggagtcgagctgccgtatc 355
                || |||||||  | || |||||| || || || ||||||||||| |||||||| || || 
Sbjct: 33259855 ttaggattccgcctcaagaagatatggccagcggagaagatggaatcgagctgtcggatt 33259914

                                                                  
Query: 356      gcgtatcccaggtgctgcttcccactccgtatcctgtcacgcagccttgg 405
                ||  ||||||| ||| |||  ||| |||||||||||||||||| ||||||
Sbjct: 33259915 gccgatcccagttgccgctgtccattccgtatcctgtcacgcaaccttgg 33259964



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                    
Query: 519      cctccattctcagtaccaaagttgacttctctgaagacagggactcaacctg 570
                |||| |||||||||| ||| | ||  ||||||||||| ||||||||||||||
Sbjct: 33260171 cctctattctcagtaacaaggctgctttctctgaagagagggactcaacctg 33260222



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                                
Query: 424      tgattcttgccatgtaccggcctcgatgtctatcctcgacgacgagct 471
                |||||||||||||||||| || ||||| |||||| | ||||| |||||
Sbjct: 33259971 tgattcttgccatgtaccagcttcgatatctatctttgacgaggagct 33260018
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>emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0059K02,
              complete sequence
          Length = 165745

 Score =  115 bits (58), Expect = 2e-22
 Identities = 142/170 (83%)
 Strand = Plus / Plus

                                                                          
Query: 236    agtatgtacatgacccatatgtggaggcacaccaggtacaccgcggccccgacctgcgcc 295
              |||||||||| |||||||||||||||||||||||||||||||  |||||  ||  |||||
Sbjct: 142444 agtatgtacaggacccatatgtggaggcacaccaggtacaccatggcccaaactagcgcc 142503

                                                                          
Query: 296    ttcggattcctacgcaggaagatgtgaccggccgagaagatggagtcgagctgccgtatc 355
              || |||||||  | || |||||| || || || ||||||||||| |||||||| || || 
Sbjct: 142504 ttaggattccgcctcaagaagatatggccagcggagaagatggaatcgagctgtcggatt 142563

                                                                
Query: 356    gcgtatcccaggtgctgcttcccactccgtatcctgtcacgcagccttgg 405
              ||  ||||||| ||| |||  ||| |||||||||||||||||| ||||||
Sbjct: 142564 gccgatcccagttgccgctgtccattccgtatcctgtcacgcaaccttgg 142613



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                  
Query: 519    cctccattctcagtaccaaagttgacttctctgaagacagggactcaacctg 570
              |||| |||||||||| ||| | ||  ||||||||||| ||||||||||||||
Sbjct: 142820 cctctattctcagtaacaaggctgctttctctgaagagagggactcaacctg 142871



 Score = 48.1 bits (24), Expect = 0.033
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                              
Query: 424    tgattcttgccatgtaccggcctcgatgtctatcctcgacgacgagct 471
              |||||||||||||||||| || ||||| |||||| | ||||| |||||
Sbjct: 142620 tgattcttgccatgtaccagcttcgatatctatctttgacgaggagct 142667
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>gb|AC138116.4| Mus musculus BAC clone RP24-242H5 from chromosome 15, complete sequence
          Length = 164014

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 121   aaagaaaacaaaactacagagagagaacaca 151
             ||||||||||||||  |||||||||||||||
Sbjct: 65725 aaagaaaacaaaacctcagagagagaacaca 65755
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>gb|AC134420.8| Mus musculus chromosome 15, clone RP23-478J5, complete sequence
          Length = 190455

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 121    aaagaaaacaaaactacagagagagaacaca 151
              ||||||||||||||  |||||||||||||||
Sbjct: 167813 aaagaaaacaaaacctcagagagagaacaca 167783
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>emb|AL121899.37|HSBA128M1 Human DNA sequence from clone RP11-128M1 on chromosome 20 Contains the
             3' end of a variant of the STK35 gene for serine/threonine
             kinase 35, a novel gene and a CpG island, complete
             sequence
          Length = 139037

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 407   gaagaatatggtgaatatgat 427
             |||||||||||||||||||||
Sbjct: 59564 gaagaatatggtgaatatgat 59544
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>gb|AC093499.2| Drosophila melanogaster 3L BAC RP98-18K24 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 169209

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 91    aggctacgtacatatatctat 111
             |||||||||||||||||||||
Sbjct: 79501 aggctacgtacatatatctat 79521
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>gb|AC016493.14| Homo sapiens chromosome 18, clone RP11-58G13, complete sequence
          Length = 163936

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 118   cacaaagaaaacaaaactaca 138
             |||||||||||||||||||||
Sbjct: 28335 cacaaagaaaacaaaactaca 28315
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>gb|AC008901.5|AC008901 Homo sapiens chromosome 5 clone CTD-2245E22, complete sequence
          Length = 165916

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 101   catatatctatgatgtacacaaagaaaacaaaa 133
             |||||||||||||||||||  ||||||| ||||
Sbjct: 34304 catatatctatgatgtacaataagaaaaaaaaa 34336
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>gb|AE003529.3| Drosophila melanogaster chromosome 3L, section 56 of 83 of the complete
              sequence
          Length = 252201

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 91     aggctacgtacatatatctat 111
              |||||||||||||||||||||
Sbjct: 215486 aggctacgtacatatatctat 215506
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>emb|CT486002.9| Mouse DNA sequence from clone RP23-396G8 on chromosome 17, complete
              sequence
          Length = 220042

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 121    aaagaaaacaaaactacagagagag 145
              ||||||||||||||||||| |||||
Sbjct: 141990 aaagaaaacaaaactacagggagag 141966
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>emb|AL732478.7| Mouse DNA sequence from clone RP23-42N14 on chromosome 2, complete
             sequence
          Length = 203434

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 42    atctgtcaacaagtcttataa 62
             |||||||||||||||||||||
Sbjct: 56221 atctgtcaacaagtcttataa 56201
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>gb|M61127.1|DROAFLL Drosophila melanogaster GTP-binding protein (arf-like) gene,
           complete cds
          Length = 1347

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 91  aggctacgtacatatatctat 111
           |||||||||||||||||||||
Sbjct: 736 aggctacgtacatatatctat 756
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>gb|AC011757.12| Drosophila melanogaster clone BACR13E23, complete sequence
          Length = 176393

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 46    gtcaacaagtcttataacgtgcct 69
             |||||||| |||||||||||||||
Sbjct: 77913 gtcaacaaatcttataacgtgcct 77936
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>gb|AC138318.7| Mus musculus chromosome 3, clone RP23-358I23, complete sequence
          Length = 201126

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 136  acagagagagaacacacagg 155
            ||||||||||||||||||||
Sbjct: 4466 acagagagagaacacacagg 4485
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>gb|AC115046.7| Mus musculus chromosome 5, clone RP24-321O4, complete sequence
          Length = 157064

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 118   cacaaagaaaacaaaactacagag 141
             ||||||||||||| ||||||||||
Sbjct: 69428 cacaaagaaaacagaactacagag 69405
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>gb|AC122289.2| Mus musculus BAC clone RP23-254F12 from 3, complete sequence
          Length = 210708

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    acagagagagaacacacagg 155
              ||||||||||||||||||||
Sbjct: 203580 acagagagagaacacacagg 203599
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>gb|AC006204.1| Homo sapiens PAC clone RP5-1102B4 from 7, complete sequence
          Length = 144563

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   acagagagagaacacacagg 155
             ||||||||||||||||||||
Sbjct: 87111 acagagagagaacacacagg 87092
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>gb|U55854.2| Caenorhabditis elegans cosmid C04G6, complete sequence
          Length = 27195

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 454  tatcctcgacgacgagcttg 473
            ||||||||||||||||||||
Sbjct: 9264 tatcctcgacgacgagcttg 9283
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>emb|AL353573.10| Human DNA sequence from clone RP11-550E18 on chromosome 9 Contains a
              solute carrier family 25 (mitochondrial carrier; adenine
              nucleotide translocator), member 5 (SLC25A5) (ANT2)
              pseudogene, complete sequence
          Length = 166664

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 125    aaaacaaaactacagagaga 144
              ||||||||||||||||||||
Sbjct: 142380 aaaacaaaactacagagaga 142399
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>gb|BC055052.1| Mus musculus cDNA clone IMAGE:6493732, partial cds
          Length = 6148

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 118  cacaaagaaaacaaaactac 137
            ||||||||||||||||||||
Sbjct: 1500 cacaaagaaaacaaaactac 1481
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>emb|AL118510.6|HSJ858M22 Human DNA sequence from clone RP5-858M22 on chromosome 20 Contains part
             of the C20orf133 gene for chromosome 20 open reading frame
             133 and the RPS10P2 gene for ribosomal protein S10
             pseudogene 2, complete sequence
          Length = 124114

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 359   tatcccaggtgctgcttccc 378
             ||||||||||||||||||||
Sbjct: 32116 tatcccaggtgctgcttccc 32135
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>gb|AF450278.1| Vitis vinifera floricaula/leafy-like protein gene, complete cds
          Length = 2333

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 184 cagagagaaggtggcgccgg 203
           ||||||||||||||||||||
Sbjct: 501 cagagagaaggtggcgccgg 482
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>gb|AC090587.10| Homo sapiens chromosome 11, clone RP11-348A20, complete sequence
          Length = 165459

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 404   ggggaagaatatggtgaata 423
             ||||||||||||||||||||
Sbjct: 52542 ggggaagaatatggtgaata 52561
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>gb|DQ118863.1| Streptomyces fradiae strain NRRL18158 lipopeptide antibiotic A54145
              biosynthetic gene cluster, complete sequence
          Length = 126933

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 192    aggtggcgccggggcgggtg 211
              ||||||||||||||||||||
Sbjct: 112952 aggtggcgccggggcgggtg 112971
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>emb|CR769774.8| Zebrafish DNA sequence from clone DKEY-149I17 in linkage group 2,
             complete sequence
          Length = 211636

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 113   atgtacacaaagaaaacaaaacta 136
             ||||| ||||||||||||||||||
Sbjct: 42153 atgtatacaaagaaaacaaaacta 42130
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>gb|AE012019.1| Xanthomonas axonopodis pv. citri str. 306,  section 397 of 469 of the
            complete genome
          Length = 10029

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 475  agacgccagcgacgaggcgt 494
            ||||||||||||||||||||
Sbjct: 8007 agacgccagcgacgaggcgt 8026
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>gb|AC099666.2| Homo sapiens chromosome 3 clone RP11-215K24, complete sequence
          Length = 152755

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 113    atgtacacaaagaaaacaaaacta 136
              ||||||| ||||||||||||||||
Sbjct: 105623 atgtacaaaaagaaaacaaaacta 105600
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>gb|AC012047.8| Homo sapiens chromosome 10 clone RP11-423F10, complete sequence
          Length = 188645

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 363    ccaggtgctgcttcccactc 382
              ||||||||||||||||||||
Sbjct: 154409 ccaggtgctgcttcccactc 154390
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>gb|AC090971.3| Homo sapiens chromosome 15 clone RP11-56B16 map 15q21.3, complete
             sequence
          Length = 192464

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   gatgtacacaaagaaaacaa 131
             ||||||||||||||||||||
Sbjct: 45994 gatgtacacaaagaaaacaa 45975
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>ref|NM_062538.3| Caenorhabditis elegans PhosphoLipase D family member (pld-1)
           (pld-1) mRNA, complete cds
          Length = 4647

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 454 tatcctcgacgacgagcttg 473
           ||||||||||||||||||||
Sbjct: 446 tatcctcgacgacgagcttg 427
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>gb|AC158332.1| Homo sapiens chromosome 20 clone WI2-3439N14, complete sequence
          Length = 37733

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 359   tatcccaggtgctgcttccc 378
             ||||||||||||||||||||
Sbjct: 19678 tatcccaggtgctgcttccc 19697
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>gb|AC007383.4| Homo sapiens BAC clone RP11-310K15 from 2, complete sequence
          Length = 214978

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    ccgaggacaaaaccagtaat 31
             ||||||||||||||||||||
Sbjct: 11114 ccgaggacaaaaccagtaat 11095
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>gb|AC060812.15| Homo sapiens chromosome 11, clone RP11-120E20, complete sequence
          Length = 184106

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   ggggaagaatatggtgaata 423
             ||||||||||||||||||||
Sbjct: 34681 ggggaagaatatggtgaata 34662
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>ref|XM_224510.3| PREDICTED: Rattus norvegicus similar to CG10084-PA (predicted)
            (LOC306137), mRNA
          Length = 4149

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 267  ccaggtacaccgcggccccgacct 290
            ||||||||||||||||| ||||||
Sbjct: 3091 ccaggtacaccgcggcctcgacct 3068
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>gb|AC140183.2| Mus musculus BAC clone RP24-350N4 from chromosome 9, complete
           sequence
          Length = 181029

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 118 cacaaagaaaacaaaactac 137
           ||||||||||||||||||||
Sbjct: 827 cacaaagaaaacaaaactac 846
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>dbj|AK024511.1| Homo sapiens cDNA: FLJ20858 fis, clone ADKA01561
          Length = 950

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 404 ggggaagaatatggtgaata 423
           ||||||||||||||||||||
Sbjct: 175 ggggaagaatatggtgaata 194
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>gb|AE002603.3| Drosophila melanogaster chromosome 2L, section 83 of 83 of the
            complete sequence
          Length = 143856

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 46   gtcaacaagtcttataacgtgcct 69
            |||||||| |||||||||||||||
Sbjct: 9960 gtcaacaaatcttataacgtgcct 9983
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>gb|BC082039.1| Rattus norvegicus similar to CG10084-PA, mRNA (cDNA clone
            IMAGE:7131439)
          Length = 2258

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 267  ccaggtacaccgcggccccgacct 290
            ||||||||||||||||| ||||||
Sbjct: 1692 ccaggtacaccgcggcctcgacct 1669
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>dbj|AP003471.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1552D7
          Length = 160912

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    tccctgcacagcaataggct 95
             ||||||||||||||||||||
Sbjct: 85905 tccctgcacagcaataggct 85886
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>dbj|AP002847.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1742H10
          Length = 155723

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 76   tccctgcacagcaataggct 95
            ||||||||||||||||||||
Sbjct: 5062 tccctgcacagcaataggct 5043
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>gb|CP000221.1| Drosophila melanogaster genomic scaffold 211000022280740
          Length = 552562

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 46     gtcaacaagtcttataacgtgcct 69
              |||||||| |||||||||||||||
Sbjct: 550142 gtcaacaaatcttataacgtgcct 550165
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>gb|CP000215.1| Drosophila melanogaster genomic scaffold 211000022280786
          Length = 161503

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 46     gtcaacaagtcttataacgtgcct 69
              |||||||| |||||||||||||||
Sbjct: 103109 gtcaacaaatcttataacgtgcct 103132
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>gb|CP000174.1| Drosophila melanogaster genomic scaffold 211000022279614
          Length = 63422

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 46    gtcaacaagtcttataacgtgcct 69
             |||||||| |||||||||||||||
Sbjct: 51911 gtcaacaaatcttataacgtgcct 51888
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>gb|CP000173.1| Drosophila melanogaster genomic scaffold 211000022279541
          Length = 57826

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 46    gtcaacaagtcttataacgtgcct 69
             |||||||| |||||||||||||||
Sbjct: 51881 gtcaacaaatcttataacgtgcct 51858
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>gb|AC122426.5| Mus musculus BAC clone RP24-174I4 from 9, complete sequence
          Length = 153629

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 118    cacaaagaaaacaaaactac 137
              ||||||||||||||||||||
Sbjct: 117577 cacaaagaaaacaaaactac 117596
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>emb|AL808103.8| Mouse DNA sequence from clone RP23-301G2 on chromosome 4, complete
             sequence
          Length = 232070

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    ctacgtacatatatctatga 113
             ||||||||||||||||||||
Sbjct: 10588 ctacgtacatatatctatga 10569
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>dbj|AB028889.1| Caenorhabditis elegans PLD mRNA for phospholipase D, complete cds
          Length = 4634

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 454 tatcctcgacgacgagcttg 473
           ||||||||||||||||||||
Sbjct: 522 tatcctcgacgacgagcttg 503


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,218,801
Number of Sequences: 3902068
Number of extensions: 5218801
Number of successful extensions: 110699
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 110561
Number of HSP's gapped (non-prelim): 138
length of query: 595
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 572
effective length of database: 17,143,297,704
effective search space: 9805966286688
effective search space used: 9805966286688
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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