| Clone Name | rbags15j12 |
|---|---|
| Clone Library Name | barley_pub |
>IBBWP_MAIZE (P31862) Bowman-Birk type wound-induced proteinase inhibitor WIP1| precursor Length = 102 Score = 41.2 bits (95), Expect = 6e-04 Identities = 24/61 (39%), Positives = 27/61 (44%), Gaps = 4/61 (6%) Frame = -1 Query: 394 KCCNXCR-SFSGVDVCDDAHPKCPKGCSACRV---VTPSPHKTFXCADMKSTVDGTCGGP 227 KCC C SFSG+ CDD C C C V + S + F C D T G CG Sbjct: 45 KCCTNCNFSFSGLYTCDDVKKDCDPVCKKCVVAVHASYSGNNKFRCTD---TFLGMCGPK 101 Query: 226 C 224 C Sbjct: 102 C 102
>PKSJ_BACSU (P40806) Putative polyketide synthase pksJ (PKS)| Length = 5045 Score = 31.6 bits (70), Expect = 0.48 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%) Frame = +3 Query: 237 QVPSTVLFMSAQXNVL*GL--GVTTRXAEQPLGHLGWASSQTST 362 Q+P T +FMSA N L TT E P G++ W +Q+ T Sbjct: 1869 QIPQTSVFMSASNNSYRALLPSDTTESLETPDGYVSWVLAQSGT 1912
>LCE5A_HUMAN (Q5TCM9) Late cornified envelope protein 5A (Late envelope protein| 18) (Small proline-rich-like epidermal differentiation complex protein 5A) Length = 118 Score = 29.6 bits (65), Expect = 1.8 Identities = 29/92 (31%), Positives = 30/92 (32%), Gaps = 4/92 (4%) Frame = -1 Query: 397 PKCCNXCRSFSGVDVCDDAHPKCPKGCSACRVVTPSPHKTFXCADMKSTVDGTC----GG 230 PKC C PKCP CSA P P C S+ G C GG Sbjct: 14 PKCTPKCPPKCTPKCPPKCPPKCPPQCSA-----PCPPPVSSCCG--SSSGGCCSSEGGG 66 Query: 229 PCKKH*SLQGFRLXXGVPPRIKLR*DEQSSCC 134 C H PR LR QSS C Sbjct: 67 CCLSH-----------HRPRQSLRRRPQSSSC 87
>ZPBP1_HUMAN (Q9BS86) Zona pellucida-binding protein 1 precursor (Sp38)| Length = 351 Score = 29.6 bits (65), Expect = 1.8 Identities = 13/43 (30%), Positives = 19/43 (44%) Frame = -1 Query: 376 RSFSGVDVCDDAHPKCPKGCSACRVVTPSPHKTFXCADMKSTV 248 R F G + HPKCP+ C C + +P C S++ Sbjct: 301 RCFPGYGMNVQQHPKCPECCVICSPGSYNPRDGIHCLQCNSSL 343
>TNR16_HUMAN (P08138) Tumor necrosis factor receptor superfamily member 16| precursor (Low-affinity nerve growth factor receptor) (NGF receptor) (Gp80-LNGFR) (p75 ICD) (Low affinity neurotrophin receptor p75NTR) (CD271 antigen) Length = 427 Score = 28.5 bits (62), Expect = 4.0 Identities = 19/66 (28%), Positives = 23/66 (34%), Gaps = 13/66 (19%) Frame = -1 Query: 394 KCCNXCRSFSGVDV----CDDAHPKCPKG---------CSACRVVTPSPHKTFXCADMKS 254 K C C + DDA +C G C ACRV F C D ++ Sbjct: 84 KPCTECVGLQSMSAPCVEADDAVCRCAYGYYQDETTGRCEACRVCEAGSGLVFSCQDKQN 143 Query: 253 TVDGTC 236 TV C Sbjct: 144 TVCEEC 149
>RECQ5_HUMAN (O94762) ATP-dependent DNA helicase Q5 (EC 3.6.1.-) (RecQ| protein-like 5) (RecQ5) Length = 991 Score = 28.5 bits (62), Expect = 4.0 Identities = 16/51 (31%), Positives = 22/51 (43%) Frame = -1 Query: 379 CRSFSGVDVCDDAHPKCPKGCSACRVVTPSPHKTFXCADMKSTVDGTCGGP 227 CR + DA P C KGC C+ T + + + S+ TC GP Sbjct: 411 CRHAAIAKYFGDALPACAKGCDHCQNPT-AVRRRLEALERSSSWSKTCIGP 460
>POMT1_DROME (Q9VTK2) Protein O-mannosyltransferase 1 (EC 2.4.1.109)| (Dolichyl-phosphate-mannose--protein mannosyltransferase 1) (dPOMT1) (Protein rotated abdomen) Length = 886 Score = 28.5 bits (62), Expect = 4.0 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%) Frame = -1 Query: 397 PKCCNXCRSFSGVDVCDD--AHPKCPKGCSACRVVTPSPHKT 278 P CCN R+ + ++ C D H P S R TP+P T Sbjct: 61 PLCCNGARALTMLNCCVDVNCHLNAPLRGSVNRHTTPTPTPT 102
>KR101_HUMAN (P60331) Keratin-associated protein 10-1 (Keratin-associated| protein 10.1) (High sulfur keratin-associated protein 10.1) (Keratin-associated protein 18-1) (Keratin-associated protein 18.1) Length = 282 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/57 (24%), Positives = 20/57 (35%) Frame = -1 Query: 391 CCNXCRSFSGVDVCDDAHPKCPKGCSACRVVTPSPHKTFXCADMKSTVDGTCGGPCK 221 C + C VD C ++ C C A P+P T C + C C+ Sbjct: 9 CSSACSDSWQVDACPESC--CEPHCCALSCCAPAPCLTLVCTPVSRVSSPCCQAACE 63
>YL_DROME (P98163) Putative vitellogenin receptor precursor (Protein yolkless)| (YL) Length = 1984 Score = 27.7 bits (60), Expect = 6.9 Identities = 12/26 (46%), Positives = 12/26 (46%) Frame = -1 Query: 397 PKCCNXCRSFSGVDVCDDAHPKCPKG 320 PKC CRS SG VC P G Sbjct: 1373 PKCATACRSASGRQVCQHKCRATPAG 1398
>PNS1_KLULA (Q6CY85) Protein PNS1| Length = 553 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/35 (40%), Positives = 21/35 (60%) Frame = -1 Query: 133 YACVWAALYGQQYVRCXSSLCFLSRQKAGVAC*IN 29 YA V+ ALYG+ Y+R ++ R+K G+ IN Sbjct: 412 YAYVFIALYGKPYLRAAKETWYMLREK-GIDALIN 445
>FER8_METJA (Q57619) Putative ferredoxin MJ0155| Length = 151 Score = 27.3 bits (59), Expect = 9.0 Identities = 26/109 (23%), Positives = 40/109 (36%) Frame = -1 Query: 397 PKCCNXCRSFSGVDVCDDAHPKCPKGCSACRVVTPSPHKTFXCADMKSTVDGTCGGPCKK 218 P+ C C + +++C + H G S R V P C + PCK+ Sbjct: 10 PEKCTKC--YDCINICKEIH-----GESRVRKVDGIPIFCMQCEN----------APCKE 52 Query: 217 H*SLQGFRLXXGVPPRIKLR*DEQSSCCYACVWAALYGQQYVRCXSSLC 71 + L G+P K R C AC A++ + V +LC Sbjct: 53 ICPVDAIYLKDGIPIVDKERCIACGMCAIACPIGAIFIKNRVAHKCTLC 101
>FBX38_MOUSE (Q8BMI0) F-box only protein 38 (Modulator of KLF7 activity) (MoKA)| Length = 1194 Score = 27.3 bits (59), Expect = 9.0 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = -1 Query: 307 RVVTPSPHKTFXCADMKSTVDGTCGGP 227 R+ P P K F C +++ V C GP Sbjct: 219 RLTKPQPFKDFLCISLRTFVMRNCAGP 245
>FBX38_HUMAN (Q6PIJ6) F-box only protein 38 (Modulator of KLF7 activity homolog)| (MoKA) Length = 1188 Score = 27.3 bits (59), Expect = 9.0 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = -1 Query: 307 RVVTPSPHKTFXCADMKSTVDGTCGGP 227 R+ P P K F C +++ V C GP Sbjct: 219 RLTKPQPFKDFLCISLRTFVMRNCAGP 245 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,093,073 Number of Sequences: 219361 Number of extensions: 783586 Number of successful extensions: 1838 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 1776 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1833 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 1370455656 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)