ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags15i20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF216852.1|AF216852 Zea mays delta-COP mRNA, complete cds Length = 1947 Score = 377 bits (190), Expect = e-101 Identities = 352/406 (86%) Strand = Plus / Minus Query: 246 actttggagggttgccttccttcagaggatgaattccagtgaccttcagatcactgaaag 305 |||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 1675 acttgggagggttgccttccttcagaggaagaattccagtaaccttcagatcactgaaag 1616 Query: 306 tattggaagcaccaaatccaatagagatggggaaaaatgttgacggatcagccgggggaa 365 || | || ||| |||||||| |||||||||||||| | ||| || ||||| ||||||| Sbjct: 1615 tactcgatgcagaaaatccaacggagatggggaaaaacgatgatgggtcagctgggggaa 1556 Query: 366 caataaattccatcgatccactgcggtttgactgatcaataaggataatggaccattcca 425 ||| ||||||||| || |||||||| || |||||||| ||||||| ||| |||||||||| Sbjct: 1555 caacaaattccatggaaccactgcgattcgactgatcgataaggagaatagaccattcca 1496 Query: 426 atacagagtttctagagtcatacttccactctccatcaatctgtttaacggttggagcct 485 | ||||||||||| ||||| |||||||||||||||| |||||| |||| | ||||||| Sbjct: 1495 acacagagtttcttgagtcgaacttccactctccatcgatctgtctaacactcggagcct 1436 Query: 486 cccgaagtgcaggcagaggaattgatatgacaacattgttcaggtcaaacatctctgagg 545 |||||||||| |||||||| || ||||||||||| |||| ||| ||||||||||| || | Sbjct: 1435 cccgaagtgctggcagaggtatagatatgacaacgttgtgcagatcaaacatctcagaag 1376 Query: 546 cctcgtattcaatgttgacataggtttcatttccagataccgatggccagcagttaactg 605 | || ||||||||||| ||||||||||||||||||||||| || |||||||| || |||| Sbjct: 1375 cttcatattcaatgttcacataggtttcatttccagatactgacggccagcaattgactg 1316 Query: 606 acaggggtaaattcgattcattcatcccctgaattctccatttcac 651 |||| |||||| || |||| ||||||||| |||||||||||||| Sbjct: 1315 acagaggtaaagatgactcatccatcccctggattctccatttcac 1270
>dbj|AK104894.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-G01, full insert sequence Length = 1277 Score = 377 bits (190), Expect = e-101 Identities = 364/422 (86%) Strand = Plus / Minus Query: 224 accaaacggaccctctgtgaatactttggagggttgccttccttcagaggatgaattcca 283 |||||||| ||||||| ||||||||||| ||||| || ||||| |||||| |||||||| Sbjct: 1040 accaaacgagccctctgcgaatactttggtgggttaccatcctttagaggacgaattcca 981 Query: 284 gtgaccttcagatcactgaaagtattggaagcaccaaatccaatagagatggggaaaaat 343 || ||||||| ||| ||||| ||| | || || ||||||||| || |||||||||||| Sbjct: 980 gtaaccttcaaatcgctgaatgtactagatgcggaaaatccaattgatatggggaaaaat 921 Query: 344 gttgacggatcagccgggggaacaataaattccatcgatccactgcggtttgactgatca 403 ||||| |||||||| ||||| ||| ||||||||| || ||||||||||||||||||||| Sbjct: 920 gttgatggatcagctggggggacagcaaattccatggagccactgcggtttgactgatca 861 Query: 404 ataaggataatggaccattccaatacagagtttctagagtcatacttccactctccatca 463 ||||| | ||||||||||||||| || |||||||| || |||||| |||||||||||||| Sbjct: 860 ataagaagaatggaccattccaacacggagtttctcgaatcatacctccactctccatca 801 Query: 464 atctgtttaacggttggagcctcccgaagtgcaggcagaggaattgatatgacaacattg 523 |||||| |||| | |||||||||||||||||||||| || || ||||||||||||||| Sbjct: 800 atctgtctaacactcggagcctcccgaagtgcaggcaatggtatagatatgacaacattg 741 Query: 524 ttcaggtcaaacatctctgaggcctcgtattcaatgttgacataggtttcatttccagat 583 | ||||||||||||||| | ||||| ||||||||||||||||| ||||||||||||||| Sbjct: 740 tgcaggtcaaacatctcagcagcctcatattcaatgttgacataagtttcatttccagat 681 Query: 584 accgatggccagcagttaactgacaggggtaaattcgattcattcatcccctgaattctc 643 ||||||||||||||||| ||||| || ||||| || |||| |||||| ||||||||| Sbjct: 680 accgatggccagcagttgactgatagaggtaacgatgactcatccatcccatgaattctc 621 Query: 644 ca 645 || Sbjct: 620 ca 619
>dbj|AK100520.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100J17, full insert sequence Length = 1972 Score = 377 bits (190), Expect = e-101 Identities = 364/422 (86%) Strand = Plus / Minus Query: 224 accaaacggaccctctgtgaatactttggagggttgccttccttcagaggatgaattcca 283 |||||||| ||||||| ||||||||||| ||||| || ||||| |||||| |||||||| Sbjct: 1735 accaaacgagccctctgcgaatactttggtgggttaccatcctttagaggacgaattcca 1676 Query: 284 gtgaccttcagatcactgaaagtattggaagcaccaaatccaatagagatggggaaaaat 343 || ||||||| ||| ||||| ||| | || || ||||||||| || |||||||||||| Sbjct: 1675 gtaaccttcaaatcgctgaatgtactagatgcggaaaatccaattgatatggggaaaaat 1616 Query: 344 gttgacggatcagccgggggaacaataaattccatcgatccactgcggtttgactgatca 403 ||||| |||||||| ||||| |||| ||||||||| || |||||||||||||||||||| Sbjct: 1615 gttgatggatcagctggggggacaacaaattccatggagccactgcggtttgactgatcg 1556 Query: 404 ataaggataatggaccattccaatacagagtttctagagtcatacttccactctccatca 463 ||||| | ||||||||||||||| || |||||||| || |||||| |||||||||||||| Sbjct: 1555 ataagaagaatggaccattccaacacggagtttctcgaatcatacctccactctccatca 1496 Query: 464 atctgtttaacggttggagcctcccgaagtgcaggcagaggaattgatatgacaacattg 523 |||||| |||| | |||||||||||||||||||||| || || ||||||||||||||| Sbjct: 1495 atctgtctaacactcggagcctcccgaagtgcaggcaatggtatagatatgacaacattg 1436 Query: 524 ttcaggtcaaacatctctgaggcctcgtattcaatgttgacataggtttcatttccagat 583 | ||||||||||||||| | ||||| ||||||||||||||||| ||||||||||||||| Sbjct: 1435 tgcaggtcaaacatctcagcagcctcatattcaatgttgacataagtttcatttccagat 1376 Query: 584 accgatggccagcagttaactgacaggggtaaattcgattcattcatcccctgaattctc 643 ||||||||||||||||| ||||| || ||||| || |||| |||||| ||||||||| Sbjct: 1375 accgatggccagcagttgactgatagaggtaacgatgactcatccatcccatgaattctc 1316 Query: 644 ca 645 || Sbjct: 1315 ca 1314
>dbj|AK100201.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040F10, full insert sequence Length = 1972 Score = 377 bits (190), Expect = e-101 Identities = 364/422 (86%) Strand = Plus / Minus Query: 224 accaaacggaccctctgtgaatactttggagggttgccttccttcagaggatgaattcca 283 |||||||| ||||||| ||||||||||| ||||| || ||||| |||||| |||||||| Sbjct: 1735 accaaacgagccctctgcgaatactttggtgggttaccatcctttagaggacgaattcca 1676 Query: 284 gtgaccttcagatcactgaaagtattggaagcaccaaatccaatagagatggggaaaaat 343 || ||||||| ||| ||||| ||| | || || ||||||||| || |||||||||||| Sbjct: 1675 gtaaccttcaaatcgctgaatgtactagatgcggaaaatccaattgatatggggaaaaat 1616 Query: 344 gttgacggatcagccgggggaacaataaattccatcgatccactgcggtttgactgatca 403 ||||| |||||||| ||||| |||| ||||||||| || |||||||||||||||||||| Sbjct: 1615 gttgatggatcagctggggggacaacaaattccatggagccactgcggtttgactgatcg 1556 Query: 404 ataaggataatggaccattccaatacagagtttctagagtcatacttccactctccatca 463 ||||| | ||||||||||||||| || |||||||| || |||||| |||||||||||||| Sbjct: 1555 ataagaagaatggaccattccaacacggagtttctcgaatcatacctccactctccatca 1496 Query: 464 atctgtttaacggttggagcctcccgaagtgcaggcagaggaattgatatgacaacattg 523 |||||| |||| | |||||||||||||||||||||| || || ||||||||||||||| Sbjct: 1495 atctgtctaacactcggagcctcccgaagtgcaggcaatggtatagatatgacaacattg 1436 Query: 524 ttcaggtcaaacatctctgaggcctcgtattcaatgttgacataggtttcatttccagat 583 | ||||||||||||||| | ||||| ||||||||||||||||| ||||||||||||||| Sbjct: 1435 tgcaggtcaaacatctcagcagcctcatattcaatgttgacataagtttcatttccagat 1376 Query: 584 accgatggccagcagttaactgacaggggtaaattcgattcattcatcccctgaattctc 643 ||||||||||||||||| ||||| || ||||| || |||| |||||| ||||||||| Sbjct: 1375 accgatggccagcagttgactgatagaggtaacgatgactcatccatcccatgaattctc 1316 Query: 644 ca 645 || Sbjct: 1315 ca 1314
>dbj|AK099633.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059C16, full insert sequence Length = 1962 Score = 377 bits (190), Expect = e-101 Identities = 364/422 (86%) Strand = Plus / Minus Query: 224 accaaacggaccctctgtgaatactttggagggttgccttccttcagaggatgaattcca 283 |||||||| ||||||| ||||||||||| ||||| || ||||| |||||| |||||||| Sbjct: 1725 accaaacgagccctctgcgaatactttggtgggttaccatcctttagaggacgaattcca 1666 Query: 284 gtgaccttcagatcactgaaagtattggaagcaccaaatccaatagagatggggaaaaat 343 || ||||||| ||| ||||| ||| | || || ||||||||| || |||||||||||| Sbjct: 1665 gtaaccttcaaatcgctgaatgtactagatgcggaaaatccaattgatatggggaaaaat 1606 Query: 344 gttgacggatcagccgggggaacaataaattccatcgatccactgcggtttgactgatca 403 ||||| |||||||| ||||| |||| ||||||||| || |||||||||||||||||||| Sbjct: 1605 gttgatggatcagctggggggacaacaaattccatggagccactgcggtttgactgatcg 1546 Query: 404 ataaggataatggaccattccaatacagagtttctagagtcatacttccactctccatca 463 ||||| | ||||||||||||||| || |||||||| || |||||| |||||||||||||| Sbjct: 1545 ataagaagaatggaccattccaacacggagtttctcgaatcatacctccactctccatca 1486 Query: 464 atctgtttaacggttggagcctcccgaagtgcaggcagaggaattgatatgacaacattg 523 |||||| |||| | |||||||||||||||||||||| || || ||||||||||||||| Sbjct: 1485 atctgtctaacactcggagcctcccgaagtgcaggcaatggtatagatatgacaacattg 1426 Query: 524 ttcaggtcaaacatctctgaggcctcgtattcaatgttgacataggtttcatttccagat 583 | ||||||||||||||| | ||||| ||||||||||||||||| ||||||||||||||| Sbjct: 1425 tgcaggtcaaacatctcagcagcctcatattcaatgttgacataagtttcatttccagat 1366 Query: 584 accgatggccagcagttaactgacaggggtaaattcgattcattcatcccctgaattctc 643 ||||||||||||||||| ||||| || ||||| || |||| |||||| ||||||||| Sbjct: 1365 accgatggccagcagttgactgatagaggtaacgatgactcatccatcccatgaattctc 1306 Query: 644 ca 645 || Sbjct: 1305 ca 1304
>dbj|AK068582.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157O09, full insert sequence Length = 2010 Score = 359 bits (181), Expect = 8e-96 Identities = 364/425 (85%) Strand = Plus / Minus Query: 224 accaaacggaccctctgtgaatactttggagggttgccttccttcagaggatgaattcca 283 |||||||| ||||||| ||||||||||| ||||| || |||||||||||| | |||||| Sbjct: 1763 accaaacgagccctctgcgaatactttggcgggttaccatccttcagaggacggattcca 1704 Query: 284 gtgaccttcagatcactgaaagtattggaagcaccaaatccaatagagatggggaaaaat 343 || ||||||| ||||||||| ||| | || || |||||||||||| |||||||||||| Sbjct: 1703 gtaaccttcaaatcactgaatgtactcgatgcggaaaatccaatagatatggggaaaaat 1644 Query: 344 gttgacggatcagccgggggaacaataaattccatcgatccactgcggtttgactgatca 403 ||||| |||||||| ||||| |||| |||||||| || ||||||||||| |||||||| Sbjct: 1643 gttgatggatcagctggggggacaacgaattccatggagccactgcggttcgactgatcg 1584 Query: 404 ataaggataatggaccattccaatacagagtttctagagtcatacttccactctccatca 463 ||||| | ||||||||||||||| || |||||||| |||||||||||||| ||||||||| Sbjct: 1583 ataagaagaatggaccattccaacacggagtttctcgagtcatacttccattctccatca 1524 Query: 464 atctgtttaacggttggagcctcccgaagtgcaggcagaggaattgatatgacaacattg 523 |||||| |||| ||||||||||||| || ||||||| || || || |||||||||||| Sbjct: 1523 atctgtctaacacttggagcctcccggagagcaggcaatggtatagagatgacaacattg 1464 Query: 524 ttcaggtcaaacatctctgaggcctcgtattcaatgttgacataggtttcatttccagat 583 | ||||||||||||||| | || || || ||||||||||||||||||||| |||||||| Sbjct: 1463 tgcaggtcaaacatctcagcagcttcatactcaatgttgacataggtttcacttccagat 1404 Query: 584 accgatggccagcagttaactgacaggggtaaattcgattcattcatcccctgaattctc 643 || |||||||||||||| ||||| || ||||| || |||| |||||||||||||||| Sbjct: 1403 actgatggccagcagttgactgatagaggtaacgatgactcatccatcccctgaattctc 1344 Query: 644 cattt 648 ||||| Sbjct: 1343 cattt 1339
>dbj|AK106813.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-C12, full insert sequence Length = 2584 Score = 321 bits (162), Expect = 2e-84 Identities = 368/436 (84%), Gaps = 3/436 (0%) Strand = Plus / Minus Query: 219 cagcaaccaaacggaccctctgtgaatactttggagggttgc---cttccttcagaggat 275 ||||||||||||| |||||||| ||||||||||||||||||| |||| |||| ||| Sbjct: 2252 cagcaaccaaacgaaccctctgcgaatactttggagggttgctaccttcattcaaagggc 2193 Query: 276 gaattccagtgaccttcagatcactgaaagtattggaagcaccaaatccaatagagatgg 335 | |||||||| ||||||| || |||||||||||| || || |||||||| || |||| Sbjct: 2192 ggattccagtaaccttcacattactgaaagtattcgatgcggaaaatccaacggatatgg 2133 Query: 336 ggaaaaatgttgacggatcagccgggggaacaataaattccatcgatccactgcggtttg 395 || |||| |||| |||||||| || ||||||| ||||||||| |||||||||||||||| Sbjct: 2132 ggtaaaacattgatggatcagctggaggaacaacaaattccatggatccactgcggtttg 2073 Query: 396 actgatcaataaggataatggaccattccaatacagagtttctagagtcatacttccact 455 | ||||||||||||||||| ||||||||||| || |||||||| || ||||||||||||| Sbjct: 2072 attgatcaataaggataatagaccattccaaaaccgagtttcttgaatcatacttccact 2013 Query: 456 ctccatcaatctgtttaacggttggagcctcccgaagtgcaggcagaggaattgatatga 515 |||| || |||||| |||| ||||||||||||||||||||| ||||| || ||||||| Sbjct: 2012 ctccgtctatctgtctaacacgtggagcctcccgaagtgcaggaagaggtatagatatga 1953 Query: 516 caacattgttcaggtcaaacatctctgaggcctcgtattcaatgttgacataggtttcat 575 ||| ||| ||||||||||||||| || || || || || |||||||| |||||||||| Sbjct: 1952 tgacactgtgcaggtcaaacatctcagaagcttcatactcgatgttgacgtaggtttcat 1893 Query: 576 ttccagataccgatggccagcagttaactgacaggggtaaattcgattcattcatcccct 635 |||| ||| ||||||||||| || ||||| || |||||| || ||||||||||||| Sbjct: 1892 ttcctaatattgatggccagcaattgactgatagaggtaaagatgactcattcatcccct 1833 Query: 636 gaattctccatttcac 651 | |||||||||||||| Sbjct: 1832 gtattctccatttcac 1817
>gb|AY109599.1| Zea mays CL1247_1 mRNA sequence Length = 2174 Score = 289 bits (146), Expect = 6e-75 Identities = 337/406 (83%) Strand = Plus / Minus Query: 246 actttggagggttgccttccttcagaggatgaattccagtgaccttcagatcactgaaag 305 |||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 1764 acttgggagggttgccttccttcagaggaagaattccagtaaccttcagatcactgaaag 1705 Query: 306 tattggaagcaccaaatccaatagagatggggaaaaatgttgacggatcagccgggggaa 365 || | || ||| |||||||| ||||||||| | ||| || ||||| || Sbjct: 1704 tactcgatgcagaaaatccaacggagatggggnnnnncgatgatgggtcagctnnnnnaa 1645 Query: 366 caataaattccatcgatccactgcggtttgactgatcaataaggataatggaccattcca 425 ||| ||||||||| || |||||||| || |||||||| ||||||| ||| |||||||||| Sbjct: 1644 caacaaattccatggaaccactgcgattcgactgatcgataaggagaatagaccattcca 1585 Query: 426 atacagagtttctagagtcatacttccactctccatcaatctgtttaacggttggagcct 485 | ||||||||||| ||||| |||||||||||||||| |||||| |||| | ||||||| Sbjct: 1584 acacagagtttcttgagtcgaacttccactctccatcgatctgtctaacactcggagcct 1525 Query: 486 cccgaagtgcaggcagaggaattgatatgacaacattgttcaggtcaaacatctctgagg 545 |||||||||| |||||||| || ||||||||||| |||| ||| ||||||||||| || | Sbjct: 1524 cccgaagtgctggcagaggtatagatatgacaacgttgtgcagatcaaacatctcagaag 1465 Query: 546 cctcgtattcaatgttgacataggtttcatttccagataccgatggccagcagttaactg 605 | || ||||||||||| ||||||||||||||||||||||| || |||||||| || ||| Sbjct: 1464 cttcatattcaatgttcacataggtttcatttccagatacagacggccagcaattgactn 1405 Query: 606 acaggggtaaattcgattcattcatcccctgaattctccatttcac 651 |||||| || |||| ||||||||| |||||||||||||| Sbjct: 1404 nnnnnggtaaagatgactcatccatcccctggattctccatttcac 1359
>gb|AC132490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0570A02, complete sequence Length = 146541 Score = 192 bits (97), Expect = 1e-45 Identities = 142/157 (90%) Strand = Plus / Minus Query: 450 tccactctccatcaatctgtttaacggttggagcctcccgaagtgcaggcagaggaattg 509 |||||||||||||||||||| |||| | |||||||||||||||||||||| || || | Sbjct: 142539 tccactctccatcaatctgtctaacactcggagcctcccgaagtgcaggcaatggtatag 142480 Query: 510 atatgacaacattgttcaggtcaaacatctctgaggcctcgtattcaatgttgacatagg 569 ||||||||||||||| ||||||||||||||| | ||||| ||||||||||||||||| | Sbjct: 142479 atatgacaacattgtgcaggtcaaacatctcagcagcctcatattcaatgttgacataag 142420 Query: 570 tttcatttccagataccgatggccagcagttaactga 606 ||||||||||||||||||||||||||||||| ||||| Sbjct: 142419 tttcatttccagataccgatggccagcagttgactga 142383 Score = 149 bits (75), Expect = 1e-32 Identities = 135/155 (87%) Strand = Plus / Minus Query: 446 tacttccactctccatcaatctgtttaacggttggagcctcccgaagtgcaggcagagga 505 |||||||| ||||||||||||||| |||| ||||||||||||| || ||||||| || Sbjct: 131855 tacttccattctccatcaatctgtctaacacttggagcctcccggagagcaggcaatggt 131796 Query: 506 attgatatgacaacattgttcaggtcaaacatctctgaggcctcgtattcaatgttgaca 565 || || ||||||||||||| ||||||||||||||| | || || || |||||||||||| Sbjct: 131795 atagagatgacaacattgtgcaggtcaaacatctcagcagcttcatactcaatgttgaca 131736 Query: 566 taggtttcatttccagataccgatggccagcagtt 600 ||||||||| |||||||||| |||||||||||||| Sbjct: 131735 taggtttcacttccagatactgatggccagcagtt 131701 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 319 aaatccaatagagatggggaaaaatgttgacggatcagccgggggaacaataaattccat 378 ||||||||| || ||||||||||||||||| |||||||| ||||| |||| ||||||||| Sbjct: 143479 aaatccaattgatatggggaaaaatgttgatggatcagctggggggacaacaaattccat 143420 Query: 379 cgatccactgc 389 || ||||||| Sbjct: 143419 ggagccactgc 143409 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 319 aaatccaatagagatggggaaaaatgttgacggatcagccgggggaacaataaattccat 378 |||||||||||| ||||||||||||||||| |||||||| ||||| |||| |||||||| Sbjct: 132443 aaatccaatagatatggggaaaaatgttgatggatcagctggggggacaacgaattccat 132384 Query: 379 cgatccactgc 389 || ||||||| Sbjct: 132383 ggagccactgc 132373 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Minus Query: 386 ctgcggtttgactgatcaataaggataatggaccattccaatacagagtttctagagtca 445 ||||||||||||||||| ||||| | ||||||||||||||| || |||||||| || ||| Sbjct: 143324 ctgcggtttgactgatcgataagaagaatggaccattccaacacggagtttctcgaatca 143265 Query: 446 tac 448 ||| Sbjct: 143264 tac 143262 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Minus Query: 386 ctgcggtttgactgatcaataaggataatggaccattccaatacagagtttctagagtca 445 |||||||| |||||||| ||||| | ||||||||||||||| || |||||||| |||||| Sbjct: 132284 ctgcggttcgactgatcgataagaagaatggaccattccaacacggagtttctcgagtca 132225 Query: 446 tac 448 ||| Sbjct: 132224 tac 132222 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 224 accaaacggaccctctgtgaatactttggagggttgccttccttcagaggatgaattcca 283 |||||||| ||||||| ||||||||||| ||||| || ||||| |||||| |||||||| Sbjct: 143670 accaaacgagccctctgcgaatactttggtgggttaccatcctttagaggacgaattcca 143611 Query: 284 gtgacct 290 || |||| Sbjct: 143610 gtaacct 143604 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 224 accaaacggaccctctgtgaatactttggagggttgccttccttcagaggatgaattcca 283 |||||||| ||||||| ||||||||||| ||||| || |||||||||||| | |||||| Sbjct: 132641 accaaacgagccctctgcgaatactttggcgggttaccatccttcagaggacggattcca 132582 Query: 284 gtgacct 290 || |||| Sbjct: 132581 gtaacct 132575 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 623 tcattcatcccctgaattctccattt 648 |||| ||||||||||||||||||||| Sbjct: 131568 tcatccatcccctgaattctccattt 131543
>gb|AC136524.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0474A01, complete sequence Length = 140077 Score = 192 bits (97), Expect = 1e-45 Identities = 142/157 (90%) Strand = Plus / Minus Query: 450 tccactctccatcaatctgtttaacggttggagcctcccgaagtgcaggcagaggaattg 509 |||||||||||||||||||| |||| | |||||||||||||||||||||| || || | Sbjct: 10018 tccactctccatcaatctgtctaacactcggagcctcccgaagtgcaggcaatggtatag 9959 Query: 510 atatgacaacattgttcaggtcaaacatctctgaggcctcgtattcaatgttgacatagg 569 ||||||||||||||| ||||||||||||||| | ||||| ||||||||||||||||| | Sbjct: 9958 atatgacaacattgtgcaggtcaaacatctcagcagcctcatattcaatgttgacataag 9899 Query: 570 tttcatttccagataccgatggccagcagttaactga 606 ||||||||||||||||||||||||||||||| ||||| Sbjct: 9898 tttcatttccagataccgatggccagcagttgactga 9862 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 319 aaatccaatagagatggggaaaaatgttgacggatcagccgggggaacaataaattccat 378 ||||||||| || ||||||||||||||||| |||||||| ||||| |||| ||||||||| Sbjct: 10958 aaatccaattgatatggggaaaaatgttgatggatcagctggggggacaacaaattccat 10899 Query: 379 cgatccactgc 389 || ||||||| Sbjct: 10898 ggagccactgc 10888 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Minus Query: 386 ctgcggtttgactgatcaataaggataatggaccattccaatacagagtttctagagtca 445 ||||||||||||||||| ||||| | ||||||||||||||| || |||||||| || ||| Sbjct: 10803 ctgcggtttgactgatcgataagaagaatggaccattccaacacggagtttctcgaatca 10744 Query: 446 tac 448 ||| Sbjct: 10743 tac 10741 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 224 accaaacggaccctctgtgaatactttggagggttgccttccttcagaggatgaattcca 283 |||||||| ||||||| ||||||||||| ||||| || ||||| |||||| |||||||| Sbjct: 11149 accaaacgagccctctgcgaatactttggtgggttaccatcctttagaggacgaattcca 11090 Query: 284 gtgacct 290 || |||| Sbjct: 11089 gtaacct 11083 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 224 accaaacggaccctctgtgaatactttggagggttgccttccttcagaggatgaattcca 283 |||||||| ||||||| ||||||||||| ||||| || |||||||||||| | |||||| Sbjct: 119 accaaacgagccctctgcgaatactttggcgggttaccatccttcagaggacggattcca 60 Query: 284 gtgacct 290 || |||| Sbjct: 59 gtaacct 53
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 192 bits (97), Expect = 1e-45 Identities = 142/157 (90%) Strand = Plus / Minus Query: 450 tccactctccatcaatctgtttaacggttggagcctcccgaagtgcaggcagaggaattg 509 |||||||||||||||||||| |||| | |||||||||||||||||||||| || || | Sbjct: 14062463 tccactctccatcaatctgtctaacactcggagcctcccgaagtgcaggcaatggtatag 14062404 Query: 510 atatgacaacattgttcaggtcaaacatctctgaggcctcgtattcaatgttgacatagg 569 ||||||||||||||| ||||||||||||||| | ||||| ||||||||||||||||| | Sbjct: 14062403 atatgacaacattgtgcaggtcaaacatctcagcagcctcatattcaatgttgacataag 14062344 Query: 570 tttcatttccagataccgatggccagcagttaactga 606 ||||||||||||||||||||||||||||||| ||||| Sbjct: 14062343 tttcatttccagataccgatggccagcagttgactga 14062307 Score = 149 bits (75), Expect = 1e-32 Identities = 135/155 (87%) Strand = Plus / Minus Query: 446 tacttccactctccatcaatctgtttaacggttggagcctcccgaagtgcaggcagagga 505 |||||||| ||||||||||||||| |||| ||||||||||||| || ||||||| || Sbjct: 14051778 tacttccattctccatcaatctgtctaacacttggagcctcccggagagcaggcaatggt 14051719 Query: 506 attgatatgacaacattgttcaggtcaaacatctctgaggcctcgtattcaatgttgaca 565 || || ||||||||||||| ||||||||||||||| | || || || |||||||||||| Sbjct: 14051718 atagagatgacaacattgtgcaggtcaaacatctcagcagcttcatactcaatgttgaca 14051659 Query: 566 taggtttcatttccagataccgatggccagcagtt 600 ||||||||| |||||||||| |||||||||||||| Sbjct: 14051658 taggtttcacttccagatactgatggccagcagtt 14051624 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 319 aaatccaatagagatggggaaaaatgttgacggatcagccgggggaacaataaattccat 378 ||||||||| || ||||||||||||||||| |||||||| ||||| |||| ||||||||| Sbjct: 14063403 aaatccaattgatatggggaaaaatgttgatggatcagctggggggacaacaaattccat 14063344 Query: 379 cgatccactgc 389 || ||||||| Sbjct: 14063343 ggagccactgc 14063333 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 319 aaatccaatagagatggggaaaaatgttgacggatcagccgggggaacaataaattccat 378 |||||||||||| ||||||||||||||||| |||||||| ||||| |||| |||||||| Sbjct: 14052366 aaatccaatagatatggggaaaaatgttgatggatcagctggggggacaacgaattccat 14052307 Query: 379 cgatccactgc 389 || ||||||| Sbjct: 14052306 ggagccactgc 14052296 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Minus Query: 386 ctgcggtttgactgatcaataaggataatggaccattccaatacagagtttctagagtca 445 ||||||||||||||||| ||||| | ||||||||||||||| || |||||||| || ||| Sbjct: 14063248 ctgcggtttgactgatcgataagaagaatggaccattccaacacggagtttctcgaatca 14063189 Query: 446 tac 448 ||| Sbjct: 14063188 tac 14063186 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Minus Query: 386 ctgcggtttgactgatcaataaggataatggaccattccaatacagagtttctagagtca 445 |||||||| |||||||| ||||| | ||||||||||||||| || |||||||| |||||| Sbjct: 14052207 ctgcggttcgactgatcgataagaagaatggaccattccaacacggagtttctcgagtca 14052148 Query: 446 tac 448 ||| Sbjct: 14052147 tac 14052145 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 224 accaaacggaccctctgtgaatactttggagggttgccttccttcagaggatgaattcca 283 |||||||| ||||||| ||||||||||| ||||| || ||||| |||||| |||||||| Sbjct: 14063594 accaaacgagccctctgcgaatactttggtgggttaccatcctttagaggacgaattcca 14063535 Query: 284 gtgacct 290 || |||| Sbjct: 14063534 gtaacct 14063528 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 224 accaaacggaccctctgtgaatactttggagggttgccttccttcagaggatgaattcca 283 |||||||| ||||||| ||||||||||| ||||| || |||||||||||| | |||||| Sbjct: 14052564 accaaacgagccctctgcgaatactttggcgggttaccatccttcagaggacggattcca 14052505 Query: 284 gtgacct 290 || |||| Sbjct: 14052504 gtaacct 14052498 Score = 44.1 bits (22), Expect = 0.58 Identities = 25/26 (96%) Strand = Plus / Minus Query: 623 tcattcatcccctgaattctccattt 648 |||| ||||||||||||||||||||| Sbjct: 14051491 tcatccatcccctgaattctccattt 14051466
>ref|NM_190465.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1557 Score = 172 bits (87), Expect = 9e-40 Identities = 261/319 (81%) Strand = Plus / Minus Query: 287 accttcagatcactgaaagtattggaagcaccaaatccaatagagatggggaaaaatgtt 346 ||||||| |||||| || ||||| || ||| ||| |||| ||| || ||||| |||||| Sbjct: 1469 accttcaaatcactaaatgtatttgatgcagaaaacccaacagatatcgggaagaatgtt 1410 Query: 347 gacggatcagccgggggaacaataaattccatcgatccactgcggtttgactgatcaata 406 || |||||||| | || ||| | || |||| || |||||||||||||| ||||||| | Sbjct: 1409 gatggatcagctgcagggacagtgaactccaaagaaccactgcggtttgattgatcaaca 1350 Query: 407 aggataatggaccattccaatacagagtttctagagtcatacttccactctccatcaatc 466 || ||||||||||| ||||| || || ||||| ||||||||| |||| ||||| || ||| Sbjct: 1349 agaataatggaccactccaacactgaatttcttgagtcatacctccattctccgtctatc 1290 Query: 467 tgtttaacggttggagcctcccgaagtgcaggcagaggaattgatatgacaacattgttc 526 || |||| ||||||||||| |||||| || ||||| || || ||||||||||||| | Sbjct: 1289 tgcctaacacctggagcctccctaagtgcggggagagggatagagatgacaacattgtgc 1230 Query: 527 aggtcaaacatctctgaggcctcgtattcaatgttgacataggtttcatttccagatacc 586 | |||||||||||||| || || ||||||||||| ||||||||||||||||| || ||| Sbjct: 1229 aaatcaaacatctctgaagcttcatattcaatgttcacataggtttcatttccggacacc 1170 Query: 587 gatggccagcagttaactg 605 || ||||| ||||| |||| Sbjct: 1169 gaaggccaacagttcactg 1151
>emb|Z67962.1|OSARDCOP O.sativa mRNA for archain/delta-COP Length = 1960 Score = 172 bits (87), Expect = 9e-40 Identities = 261/319 (81%) Strand = Plus / Minus Query: 287 accttcagatcactgaaagtattggaagcaccaaatccaatagagatggggaaaaatgtt 346 ||||||| |||||| || ||||| || ||| ||| |||| ||| || ||||| |||||| Sbjct: 1619 accttcaaatcactaaatgtatttgatgcagaaaacccaacagatatcgggaagaatgtt 1560 Query: 347 gacggatcagccgggggaacaataaattccatcgatccactgcggtttgactgatcaata 406 || |||||||| | || ||| | || |||| || |||||||||||||| ||||||| | Sbjct: 1559 gatggatcagctgcagggacagtgaactccaaagaaccactgcggtttgattgatcaaca 1500 Query: 407 aggataatggaccattccaatacagagtttctagagtcatacttccactctccatcaatc 466 || ||||||||||| ||||| || || ||||| ||||||||| |||| ||||| || ||| Sbjct: 1499 agaataatggaccactccaacactgaatttcttgagtcatacctccattctccgtctatc 1440 Query: 467 tgtttaacggttggagcctcccgaagtgcaggcagaggaattgatatgacaacattgttc 526 || |||| ||||||||||| |||||| || ||||| || || ||||||||||||| | Sbjct: 1439 tgcctaacacctggagcctccctaagtgcggggagagggatagagatgacaacattgtgc 1380 Query: 527 aggtcaaacatctctgaggcctcgtattcaatgttgacataggtttcatttccagatacc 586 | |||||||||||||| || || ||||||||||| ||||||||||||||||| || ||| Sbjct: 1379 aaatcaaacatctctgaagcttcatattcaatgttcacataggtttcatttccggacacc 1320 Query: 587 gatggccagcagttaactg 605 || ||||| ||||| |||| Sbjct: 1319 gaaggccaacagttcactg 1301
>dbj|AK069745.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027K10, full insert sequence Length = 2042 Score = 172 bits (87), Expect = 9e-40 Identities = 261/319 (81%) Strand = Plus / Minus Query: 287 accttcagatcactgaaagtattggaagcaccaaatccaatagagatggggaaaaatgtt 346 ||||||| |||||| || ||||| || ||| ||| |||| ||| || ||||| |||||| Sbjct: 1701 accttcaaatcactaaatgtatttgatgcagaaaacccaacagatatcgggaagaatgtt 1642 Query: 347 gacggatcagccgggggaacaataaattccatcgatccactgcggtttgactgatcaata 406 || |||||||| | || ||| | || |||| || |||||||||||||| ||||||| | Sbjct: 1641 gatggatcagctgcagggacagtgaactccaaagaaccactgcggtttgattgatcaaca 1582 Query: 407 aggataatggaccattccaatacagagtttctagagtcatacttccactctccatcaatc 466 || ||||||||||| ||||| || || ||||| ||||||||| |||| ||||| || ||| Sbjct: 1581 agaataatggaccactccaacactgaatttcttgagtcatacctccattctccgtctatc 1522 Query: 467 tgtttaacggttggagcctcccgaagtgcaggcagaggaattgatatgacaacattgttc 526 || |||| ||||||||||| |||||| || ||||| || || ||||||||||||| | Sbjct: 1521 tgcctaacacctggagcctccctaagtgcggggagagggatagagatgacaacattgtgc 1462 Query: 527 aggtcaaacatctctgaggcctcgtattcaatgttgacataggtttcatttccagatacc 586 | |||||||||||||| || || ||||||||||| ||||||||||||||||| || ||| Sbjct: 1461 aaatcaaacatctctgaagcttcatattcaatgttcacataggtttcatttccggacacc 1402 Query: 587 gatggccagcagttaactg 605 || ||||| ||||| |||| Sbjct: 1401 gaaggccaacagttcactg 1383
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 111 bits (56), Expect = 3e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 446 tacttccactctccatcaatctgtttaacggttggagcctcccgaagtgcaggcagagga 505 |||||||||||||| || |||||| |||| ||||||||||||||||||||| ||||| Sbjct: 17115762 tacttccactctccgtctatctgtctaacacgtggagcctcccgaagtgcaggaagaggt 17115821 Query: 506 attgatatgacaacattgttcaggtcaaacatctctgaggcctcgtattcaatgttgaca 565 || ||||||| ||| ||| ||||||||||||||| || || || || || |||||||| Sbjct: 17115822 atagatatgatgacactgtgcaggtcaaacatctcagaagcttcatactcgatgttgacg 17115881 Query: 566 taggtttcatttccagataccgatggccagca 597 |||||||||||||| ||| ||||||||||| Sbjct: 17115882 taggtttcatttcctaatattgatggccagca 17115913 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 386 ctgcggtttgactgatcaataaggataatggaccattccaatacagagtttctagagtca 445 ||||||||||| ||||||||||||||||| ||||||||||| || |||||||| || ||| Sbjct: 17115244 ctgcggtttgattgatcaataaggataatagaccattccaaaaccgagtttcttgaatca 17115303 Query: 446 tac 448 ||| Sbjct: 17115304 tac 17115306 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 219 cagcaaccaaacggaccctctgtgaatactttggagggttgc 260 ||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 17114900 cagcaaccaaacgaaccctctgcgaatactttggagggttgc 17114941 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 219 cagcaaccaaacggaccctctgtgaatactttggagggttgc 260 ||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 17103250 cagcaaccaaacgaaccctctgcgaatactttggagggttgc 17103291 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 287 accttcagatcactgaaagtattggaagcaccaaatccaatagagatggggaaaaatgtt 346 ||||||| || |||||||||||| || || |||||||| || |||||| |||| || Sbjct: 17115051 accttcacattactgaaagtattcgatgcggaaaatccaacggatatggggtaaaacatt 17115110 Query: 347 gacggatcagccgggggaacaataaattccatcgatccactgc 389 || |||||||| || ||||||| ||||||||| |||||||||| Sbjct: 17115111 gatggatcagctggaggaacaacaaattccatggatccactgc 17115153 Score = 58.0 bits (29), Expect = 4e-05 Identities = 85/103 (82%), Gaps = 3/103 (2%) Strand = Plus / Plus Query: 287 accttcagatcactgaaagtattggaagcaccaaatccaatagagatggggaaaaatgtt 346 ||||||| ||||||||||||||| || | |||||||| || ||||||||||| || Sbjct: 17103401 accttcacatcactgaaagtattcgatgtggaaaatccaacggatatggggaaaaacatt 17103460 Query: 347 gacggatcagccgggggaacaataaattccatcgatccactgc 389 || |||||||| |||||||| ||||||||| |||||||||| Sbjct: 17103461 gatggatcagctgggggaac---aaattccatggatccactgc 17103500 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 623 tcattcatcccctgaattctccatttcac 651 |||||||||||||| |||||||||||||| Sbjct: 17116012 tcattcatcccctgtattctccatttcac 17116040
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 111 bits (56), Expect = 3e-21 Identities = 110/128 (85%) Strand = Plus / Plus Query: 478 tggagcctcccgaagtgcaggcagaggaattgatatgacaacattgttcaggtcaaacat 537 ||||||||||| |||||| || ||||| || || ||||||||||||| || |||||||| Sbjct: 35696108 tggagcctccctaagtgcggggagagggatagagatgacaacattgtgcaaatcaaacat 35696167 Query: 538 ctctgaggcctcgtattcaatgttgacataggtttcatttccagataccgatggccagca 597 |||||| || || ||||||||||| ||||||||||||||||| || ||||| ||||| || Sbjct: 35696168 ctctgaagcttcatattcaatgttcacataggtttcatttccggacaccgaaggccaaca 35696227 Query: 598 gttaactg 605 ||| |||| Sbjct: 35696228 gttcactg 35696235 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 386 ctgcggtttgactgatcaataaggataatggaccattccaatacagagtttctagagtca 445 ||||||||||| ||||||| ||| ||||||||||| ||||| || || ||||| |||||| Sbjct: 35695170 ctgcggtttgattgatcaacaagaataatggaccactccaacactgaatttcttgagtca 35695229 Query: 446 tac 448 ||| Sbjct: 35695230 tac 35695232
>dbj|AP004366.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460C04 Length = 189043 Score = 111 bits (56), Expect = 3e-21 Identities = 110/128 (85%) Strand = Plus / Plus Query: 478 tggagcctcccgaagtgcaggcagaggaattgatatgacaacattgttcaggtcaaacat 537 ||||||||||| |||||| || ||||| || || ||||||||||||| || |||||||| Sbjct: 99445 tggagcctccctaagtgcggggagagggatagagatgacaacattgtgcaaatcaaacat 99504 Query: 538 ctctgaggcctcgtattcaatgttgacataggtttcatttccagataccgatggccagca 597 |||||| || || ||||||||||| ||||||||||||||||| || ||||| ||||| || Sbjct: 99505 ctctgaagcttcatattcaatgttcacataggtttcatttccggacaccgaaggccaaca 99564 Query: 598 gttaactg 605 ||| |||| Sbjct: 99565 gttcactg 99572 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 386 ctgcggtttgactgatcaataaggataatggaccattccaatacagagtttctagagtca 445 ||||||||||| ||||||| ||| ||||||||||| ||||| || || ||||| |||||| Sbjct: 98507 ctgcggtttgattgatcaacaagaataatggaccactccaacactgaatttcttgagtca 98566 Query: 446 tac 448 ||| Sbjct: 98567 tac 98569
>dbj|AP005389.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091C18 Length = 154416 Score = 111 bits (56), Expect = 3e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 446 tacttccactctccatcaatctgtttaacggttggagcctcccgaagtgcaggcagagga 505 |||||||||||||| || |||||| |||| ||||||||||||||||||||| ||||| Sbjct: 39617 tacttccactctccgtctatctgtctaacacgtggagcctcccgaagtgcaggaagaggt 39676 Query: 506 attgatatgacaacattgttcaggtcaaacatctctgaggcctcgtattcaatgttgaca 565 || ||||||| ||| ||| ||||||||||||||| || || || || || |||||||| Sbjct: 39677 atagatatgatgacactgtgcaggtcaaacatctcagaagcttcatactcgatgttgacg 39736 Query: 566 taggtttcatttccagataccgatggccagca 597 |||||||||||||| ||| ||||||||||| Sbjct: 39737 taggtttcatttcctaatattgatggccagca 39768 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 386 ctgcggtttgactgatcaataaggataatggaccattccaatacagagtttctagagtca 445 ||||||||||| ||||||||||||||||| ||||||||||| || |||||||| || ||| Sbjct: 39099 ctgcggtttgattgatcaataaggataatagaccattccaaaaccgagtttcttgaatca 39158 Query: 446 tac 448 ||| Sbjct: 39159 tac 39161 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 219 cagcaaccaaacggaccctctgtgaatactttggagggttgc 260 ||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 38755 cagcaaccaaacgaaccctctgcgaatactttggagggttgc 38796 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 219 cagcaaccaaacggaccctctgtgaatactttggagggttgc 260 ||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 27105 cagcaaccaaacgaaccctctgcgaatactttggagggttgc 27146 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 287 accttcagatcactgaaagtattggaagcaccaaatccaatagagatggggaaaaatgtt 346 ||||||| || |||||||||||| || || |||||||| || |||||| |||| || Sbjct: 38906 accttcacattactgaaagtattcgatgcggaaaatccaacggatatggggtaaaacatt 38965 Query: 347 gacggatcagccgggggaacaataaattccatcgatccactgc 389 || |||||||| || ||||||| ||||||||| |||||||||| Sbjct: 38966 gatggatcagctggaggaacaacaaattccatggatccactgc 39008 Score = 58.0 bits (29), Expect = 4e-05 Identities = 85/103 (82%), Gaps = 3/103 (2%) Strand = Plus / Plus Query: 287 accttcagatcactgaaagtattggaagcaccaaatccaatagagatggggaaaaatgtt 346 ||||||| ||||||||||||||| || | |||||||| || ||||||||||| || Sbjct: 27256 accttcacatcactgaaagtattcgatgtggaaaatccaacggatatggggaaaaacatt 27315 Query: 347 gacggatcagccgggggaacaataaattccatcgatccactgc 389 || |||||||| |||||||| ||||||||| |||||||||| Sbjct: 27316 gatggatcagctgggggaac---aaattccatggatccactgc 27355 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 623 tcattcatcccctgaattctccatttcac 651 |||||||||||||| |||||||||||||| Sbjct: 39867 tcattcatcccctgtattctccatttcac 39895
>emb|Z27083.1|PPPHLPVB P.pratense (agrostideae) mRNA for pollen allergen PhlpVb Length = 1379 Score = 105 bits (53), Expect = 2e-19 Identities = 106/121 (87%), Gaps = 2/121 (1%) Strand = Plus / Plus Query: 156 tgtgccactaacaagaaacggcagtaacaatttc-agtatggctttagactatttgatag 214 ||||||||||||||||||| ||||||| || ||| | | |||||| | |||||||||||| Sbjct: 1256 tgtgccactaacaagaaacagcagtaagaacttccattgtggcttcaaactatttgatag 1315 Query: 215 ttcgcagcaaccaaacggaccctctgtgaatactttggagggttgccttccttcagagga 274 || ||||| ||||| || |||||||||| |||| |||| ||||||||||||||||||||| Sbjct: 1316 ttagcagcgaccaagcgaaccctctgtgcatac-ttggtgggttgccttccttcagagga 1374 Query: 275 t 275 | Sbjct: 1375 t 1375 Score = 63.9 bits (32), Expect = 6e-07 Identities = 69/80 (86%), Gaps = 1/80 (1%) Strand = Plus / Plus Query: 84 gtgcgacacactacatatggaacaggacaaatc-acacatttttaaacaagtttcatgca 142 |||| ||||||||||||||||||||| |||||| |||| |||||||||| || |||| Sbjct: 1168 gtgccacacactacatatggaacaggccaaatcaacacgtttttaaacagccttagtgca 1227 Query: 143 aaattatactcattgtgcca 162 |||| |||||| |||||||| Sbjct: 1228 aaataatactccttgtgcca 1247
>ref|XM_482000.1| Oryza sativa (japonica cultivar-group), mRNA Length = 234 Score = 103 bits (52), Expect = 7e-19 Identities = 143/172 (83%), Gaps = 6/172 (3%) Strand = Plus / Minus Query: 219 cagcaaccaaacggaccctctgtgaatactttggagggttg---ccttccttcagaggat 275 ||||||||||||| |||||||| |||||||||||||||||| |||||||||| ||| Sbjct: 214 cagcaaccaaacgaaccctctgcgaatactttggagggttgctaccttccttcaaagggc 155 Query: 276 gaattccagtgaccttcagatcactgaaagtattggaagcaccaaatccaatagagatgg 335 | ||||||| ||||||| ||||||||||||||| || | |||||||| || |||| Sbjct: 154 ggattccaggaaccttcacatcactgaaagtattcgatgtggaaaatccaacggatatgg 95 Query: 336 ggaaaaatgttgacggatcagccgggggaacaataaattccatcgatccact 387 ||||||| |||| |||||||| |||||||| ||||||||| |||||||| Sbjct: 94 ggaaaaacattgatggatcagctgggggaac---aaattccatggatccact 46
>dbj|AP004663.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0410E02 Length = 144294 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 219 cagcaaccaaacggaccctctgtgaatactttggagggttgc 260 ||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 138767 cagcaaccaaacgaaccctctgcgaatactttggagggttgc 138808 Score = 58.0 bits (29), Expect = 4e-05 Identities = 85/103 (82%), Gaps = 3/103 (2%) Strand = Plus / Plus Query: 287 accttcagatcactgaaagtattggaagcaccaaatccaatagagatggggaaaaatgtt 346 ||||||| ||||||||||||||| || | |||||||| || ||||||||||| || Sbjct: 138918 accttcacatcactgaaagtattcgatgtggaaaatccaacggatatggggaaaaacatt 138977 Query: 347 gacggatcagccgggggaacaataaattccatcgatccactgc 389 || |||||||| |||||||| ||||||||| |||||||||| Sbjct: 138978 gatggatcagctgggggaac---aaattccatggatccactgc 139017
>gb|DQ100574.1| Oryza sativa (indica cultivar-group) clone 5S6A57 mRNA sequence Length = 342 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 224 accaaacggaccctctgtgaatactttggagggttgccttccttcagaggatgaattcca 283 |||||||| ||||||| ||||||||||| ||||| || ||||| | |||| |||||||| Sbjct: 85 accaaacgagccctctgcgaatactttggtgggttaccatcctttaaaggacgaattcca 26 Query: 284 gtgaccttcagatcactgaa 303 || ||||||| ||| ||||| Sbjct: 25 gtaaccttcaaatcgctgaa 6
>gb|BT013171.1| Lycopersicon esculentum clone 134238R, mRNA sequence Length = 1995 Score = 58.0 bits (29), Expect = 4e-05 Identities = 89/109 (81%) Strand = Plus / Minus Query: 380 gatccactgcggtttgactgatcaataaggataatggaccattccaatacagagtttcta 439 |||||||||||||| || | ||||| || | || ||||| ||||| ||||| ||||| Sbjct: 1565 gatccactgcggttcgaattgtcaatgagaagaacagaccactccaaaacagaatttctg 1506 Query: 440 gagtcatacttccactctccatcaatctgtttaacggttggagcctccc 488 || || ||| ||||||||||||||||||||| || |||||||||||| Sbjct: 1505 gaatcgtacctccactctccatcaatctgttgtacatttggagcctccc 1457 Score = 48.1 bits (24), Expect = 0.037 Identities = 36/40 (90%) Strand = Plus / Minus Query: 563 acataggtttcatttccagataccgatggccagcagttaa 602 |||||||||||| ||||||| || || ||||||||||||| Sbjct: 1382 acataggtttcacttccagaaactgaaggccagcagttaa 1343
>emb|AL033518.14|HS322I12 Human DNA sequence from clone RP3-322I12 on chromosome 6p22.3-24.1 Contains the 3' end of the gene for a novel protein (contains KIAA1880 and FLJ32945) and two novel genes, complete sequence Length = 112961 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 419 cattccaatacagagtttctagagtcata 447 ||||||||||||||||||||| ||||||| Sbjct: 82944 cattccaatacagagtttctatagtcata 82972
>gb|AC151765.1| Ornithorhynchus anatinus chromosome UNK clone OABb-423A1, complete sequence Length = 154417 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 288 ccttcagatcactgaaagtat 308 ||||||||||||||||||||| Sbjct: 41220 ccttcagatcactgaaagtat 41240
>gb|AC093198.3| Drosophila melanogaster clone BACR03G24, complete sequence Length = 182901 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 339 aaaatgttgacggatcagccg 359 ||||||||||||||||||||| Sbjct: 637 aaaatgttgacggatcagccg 617
>gb|AC093197.2| Drosophila melanogaster clone BACR25N15, complete sequence Length = 191907 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 339 aaaatgttgacggatcagccg 359 ||||||||||||||||||||| Sbjct: 12314 aaaatgttgacggatcagccg 12334
>emb|CR847789.7| Zebrafish DNA sequence from clone DKEYP-87A5 in linkage group 12, complete sequence Length = 189208 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 117 acacatttttaaacaagtttc 137 ||||||||||||||||||||| Sbjct: 110162 acacatttttaaacaagtttc 110142
>emb|AL139085.13| Human DNA sequence from clone RP11-431O22 on chromosome 13 Contains the 5' end of the gene for chondromodulin I precursor (CHM-I), a novel gene, the PCDH8 gene for protocadherin 8 and 4 CpG islands, complete sequence Length = 173292 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 gggttgccttccttcagagga 274 ||||||||||||||||||||| Sbjct: 152357 gggttgccttccttcagagga 152377
>gb|AC104147.4| Drosophila melanogaster X BAC RP98-33I18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170490 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 585 ccgatggccagcagttaactg 605 ||||||||||||||||||||| Sbjct: 52186 ccgatggccagcagttaactg 52206
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 agtttcatgcaaaattatact 152 ||||||||||||||||||||| Sbjct: 657034 agtttcatgcaaaattatact 657014
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 agtttcatgcaaaattatact 152 ||||||||||||||||||||| Sbjct: 619004 agtttcatgcaaaattatact 618984
>gb|AE003666.6| Drosophila melanogaster chromosome 2L, section 75 of 83 of the complete sequence Length = 318277 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 339 aaaatgttgacggatcagccg 359 ||||||||||||||||||||| Sbjct: 146364 aaaatgttgacggatcagccg 146344
>gb|AE003422.2| Drosophila melanogaster chromosome X, section 6 of 74 of the complete sequence Length = 300933 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 585 ccgatggccagcagttaactg 605 ||||||||||||||||||||| Sbjct: 94476 ccgatggccagcagttaactg 94496
>emb|CT486004.9| Mouse DNA sequence from clone RP23-424K3 on chromosome 9, complete sequence Length = 212874 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 121 atttttaaacaagtttcatgcaaaa 145 ||||||||||| ||||||||||||| Sbjct: 164111 atttttaaacatgtttcatgcaaaa 164087
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 agtttcatgcaaaattatact 152 ||||||||||||||||||||| Sbjct: 619004 agtttcatgcaaaattatact 618984
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 agtttcatgcaaaattatact 152 ||||||||||||||||||||| Sbjct: 657034 agtttcatgcaaaattatact 657014
>emb|BX571785.1|CNS09SBO Oryza sativa chromosome 12, . Partial sequence from PAC 1 of BAC OSJNBb0027O09 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 14570 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 agtttcatgcaaaattatact 152 ||||||||||||||||||||| Sbjct: 10180 agtttcatgcaaaattatact 10160
>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 181322 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 agtttcatgcaaaattatact 152 ||||||||||||||||||||| Sbjct: 123968 agtttcatgcaaaattatact 123988
>gb|AC002503.1|AC002503 Drosophila melanogaster (P1 DS05187 (D54)) DNA sequence, complete sequence Length = 78938 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 339 aaaatgttgacggatcagccg 359 ||||||||||||||||||||| Sbjct: 4875 aaaatgttgacggatcagccg 4855
>gb|AC173340.1| Mus musculus BAC clone RP24-257F22 from chromosome 9, complete sequence Length = 195116 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 121 atttttaaacaagtttcatgcaaaa 145 ||||||||||| ||||||||||||| Sbjct: 170417 atttttaaacatgtttcatgcaaaa 170441
>emb|AL024456.1|DMC131F2 Drosophila melanogaster cosmid clone 131F2 Length = 22088 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 585 ccgatggccagcagttaactg 605 ||||||||||||||||||||| Sbjct: 20188 ccgatggccagcagttaactg 20208
>gb|AC151736.6| Mus musculus BAC clone RP23-9L16 from chromosome 8, complete sequence Length = 239812 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 cagtgaccttcagatcactg 301 |||||||||||||||||||| Sbjct: 10840 cagtgaccttcagatcactg 10821
>gb|AC110575.18| Mus musculus chromosome 3, clone RP23-326B21, complete sequence Length = 176678 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 639 ttctccatttcacaagtggt 658 |||||||||||||||||||| Sbjct: 48744 ttctccatttcacaagtggt 48763
>gb|U88181.1| Caenorhabditis elegans cosmid C55B6, complete sequence Length = 25003 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 acacatttttaaacaagttt 136 |||||||||||||||||||| Sbjct: 945 acacatttttaaacaagttt 964
>gb|AC102050.13| Mus musculus chromosome 8, clone RP23-389O4, complete sequence Length = 203942 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 cagtgaccttcagatcactg 301 |||||||||||||||||||| Sbjct: 30889 cagtgaccttcagatcactg 30908
>gb|AC119906.6| Mus musculus chromosome 5, clone RP24-239D13, complete sequence Length = 257203 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 aaacagggtacaggagaatc 63 |||||||||||||||||||| Sbjct: 163350 aaacagggtacaggagaatc 163331
>gb|AC183385.3| Pan troglodytes BAC clone CH251-277F20 from chromosome 7, complete sequence Length = 148939 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 acaaatcacacatttttaaa 129 |||||||||||||||||||| Sbjct: 126179 acaaatcacacatttttaaa 126160
>emb|BX571706.24| Zebrafish DNA sequence from clone DKEYP-123H11 in linkage group 11, complete sequence Length = 196333 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 ccttcagatcactgaaagta 307 |||||||||||||||||||| Sbjct: 59156 ccttcagatcactgaaagta 59175
>ref|XM_391372.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG11196.1) partial mRNA Length = 981 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 attggaagcaccaaatccaa 326 |||||||||||||||||||| Sbjct: 131 attggaagcaccaaatccaa 150
>emb|CR974431.11| Pig DNA sequence from clone CH242-511J12 on chromosome 17, complete sequence Length = 207434 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 ggggaaaaatgttgacggat 353 |||||||||||||||||||| Sbjct: 14992 ggggaaaaatgttgacggat 14973
>gb|AC134559.5| Mus musculus BAC clone RP24-332C4 from chromosome 8, complete sequence Length = 180692 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 atgaattccagtgaccttca 293 |||||||||||||||||||| Sbjct: 171352 atgaattccagtgaccttca 171371
>gb|AC125181.4| Mus musculus BAC clone RP23-324L6 from chromosome 8, complete sequence Length = 223306 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 atgaattccagtgaccttca 293 |||||||||||||||||||| Sbjct: 48839 atgaattccagtgaccttca 48858
>gb|AC121878.1| Mus musculus BAC clone RP24-131C8 from 5, complete sequence Length = 163985 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 aaacagggtacaggagaatc 63 |||||||||||||||||||| Sbjct: 19821 aaacagggtacaggagaatc 19802
>gb|AC092648.3| Homo sapiens BAC clone RP11-421N10 from 7, complete sequence Length = 171881 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 acaaatcacacatttttaaa 129 |||||||||||||||||||| Sbjct: 104996 acaaatcacacatttttaaa 105015
>emb|AL137856.24| Human DNA sequence from clone RP5-1073O3 on chromosome 1p13.1-13.3 Contains the 5' end of the gene for a novel protein (FLJ11220 and FLJ12104), the PTPN22 gene for protein tyrosine phosphatase non-receptor type 22 (lymphoid), the gene for a novel protein, the AP4B1 gene for adaptor-related protein complex 4 beta 1 subunit, the DCLRE1B gene for DNA cross-link repair 1B (PSO2 homolog, S. cerevisiae), three novel genes, the 5' end of the HIPK1 gene for homeodomain interacting protein kinase 1 and three CpG islands, complete sequence Length = 143618 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 taagaaataaaaacagcatt 22 |||||||||||||||||||| Sbjct: 12565 taagaaataaaaacagcatt 12584
>emb|AL117379.14|HSJ563E14 Human DNA sequence from clone RP4-563E14 on chromosome 20 Contains the 5' of the DATF1 gene encoding the death associated transcription factor 1 (DIO1, FLJ11265, KIAA0333), the 5' end of a novel geneand four CpG islands, complete sequence Length = 28519 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 agcctcccgaagtgcaggca 500 |||||||||||||||||||| Sbjct: 8340 agcctcccgaagtgcaggca 8321
>emb|AL672234.27| Mouse DNA sequence from clone RP23-356I16 on chromosome 8, complete sequence Length = 221012 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 cagtgaccttcagatcactg 301 |||||||||||||||||||| Sbjct: 24941 cagtgaccttcagatcactg 24960
>gb|AC007995.23| Mus musculus, clone RP23-266E9, complete sequence Length = 204193 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 atttttaaacaagtttcatg 140 |||||||||||||||||||| Sbjct: 155500 atttttaaacaagtttcatg 155481
>emb|AJ720536.1| Gallus gallus mRNA for hypothetical protein, clone 19n17 Length = 2541 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 446 tacttccactctccatcaatctgt 469 |||||||||| ||||||||||||| Sbjct: 2052 tacttccactgtccatcaatctgt 2029
>ref|NM_138885.1| Rattus norvegicus golgi autoantigen, golgin subfamily b, macrogolgin 1 (Golgb1), mRNA Length = 10170 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 482 gcctcccgaagtgcaggcagagga 505 |||||| ||||||||||||||||| Sbjct: 654 gcctccagaagtgcaggcagagga 677
>ref|NM_001006212.1| Gallus gallus Williams-Beuren syndrome chromosome region 16 (WBSCR16), mRNA Length = 2541 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 446 tacttccactctccatcaatctgt 469 |||||||||| ||||||||||||| Sbjct: 2052 tacttccactgtccatcaatctgt 2029
>emb|Y11909.1|PFEMP1C13 P.falciparum var gene, partial, chromosome 13 Length = 585 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 tacatatggaacaggacaaa 114 |||||||||||||||||||| Sbjct: 150 tacatatggaacaggacaaa 169
>gb|AC018711.4| Homo sapiens BAC clone RP11-324K4 from 1, complete sequence Length = 167334 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gtaagaaataaaaacagcat 21 |||||||||||||||||||| Sbjct: 122961 gtaagaaataaaaacagcat 122980
>gb|AC093422.3| Homo sapiens chromosome 1 clone RP11-383G10, complete sequence Length = 180872 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 gtaagaaataaaaacagcat 21 |||||||||||||||||||| Sbjct: 65000 gtaagaaataaaaacagcat 64981
>ref|XM_624327.1| PREDICTED: Apis mellifera similar to ENSANGP00000029540 (LOC551944), mRNA Length = 1166 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gtaagaaataaaaacagcat 21 |||||||||||||||||||| Sbjct: 1044 gtaagaaataaaaacagcat 1063
>gb|AC154582.2| Mus musculus BAC clone RP23-381N7 from chromosome 12, complete sequence Length = 194302 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 558 tgttgacataggtttcattt 577 |||||||||||||||||||| Sbjct: 133353 tgttgacataggtttcattt 133372
>emb|AL929164.12| Mouse DNA sequence from clone RP23-226L18 on chromosome 2, complete sequence Length = 170293 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ttccttcagaggatgaattc 281 |||||||||||||||||||| Sbjct: 92269 ttccttcagaggatgaattc 92250
>emb|AL935207.6| Zebrafish DNA sequence from clone CH211-251J8, complete sequence Length = 146351 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 acacatttttaaacaagttt 136 |||||||||||||||||||| Sbjct: 68642 acacatttttaaacaagttt 68661
>emb|AL954149.19| Zebrafish DNA sequence from clone CH211-146G19 in linkage group 2, complete sequence Length = 163971 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 acacatttttaaacaagttt 136 |||||||||||||||||||| Sbjct: 160999 acacatttttaaacaagttt 160980
>gb|AC139158.3| Mus musculus BAC clone RP24-77I7 from 8, complete sequence Length = 203921 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 cagtgaccttcagatcactg 301 |||||||||||||||||||| Sbjct: 117093 cagtgaccttcagatcactg 117074
>emb|AL670290.13| Mouse DNA sequence from clone RP23-309M8 on chromosome 4, complete sequence Length = 174638 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 593 cagcagttaactgacagggg 612 |||||||||||||||||||| Sbjct: 156145 cagcagttaactgacagggg 156126
>dbj|D25543.1|RATGCP60 Rattus norvegicus mRNA for novel golgi-associated protein GCP360, complete cds Length = 10170 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 482 gcctcccgaagtgcaggcagagga 505 |||||| ||||||||||||||||| Sbjct: 654 gcctccagaagtgcaggcagagga 677
>emb|AL607032.16| Mouse DNA sequence from clone RP23-15L19 on chromosome 4, complete sequence Length = 136416 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 ccaatagagatggggaaaaa 342 |||||||||||||||||||| Sbjct: 14591 ccaatagagatggggaaaaa 14610 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,167,218 Number of Sequences: 3902068 Number of extensions: 7167218 Number of successful extensions: 145379 Number of sequences better than 10.0: 74 Number of HSP's better than 10.0 without gapping: 74 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 144945 Number of HSP's gapped (non-prelim): 415 length of query: 662 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 639 effective length of database: 17,143,297,704 effective search space: 10954567232856 effective search space used: 10954567232856 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
