ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags15i18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloropl... 119 2e-27
2CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloropl... 119 2e-27
3CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl... 119 3e-27
4CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla... 119 3e-27
5CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloropl... 119 3e-27
6CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl... 119 3e-27
7CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloropl... 119 3e-27
8CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl... 119 3e-27
9CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 prot... 119 3e-27
10CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla... 117 6e-27
11CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl... 117 6e-27
12CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla... 117 6e-27
13CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl... 117 6e-27
14CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla... 117 6e-27
15CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl... 117 8e-27
16CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla... 117 8e-27
17CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl... 117 8e-27
18CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe... 117 1e-26
19CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ... 117 1e-26
20CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe... 117 1e-26
21CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ... 117 1e-26
22CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII ty... 116 1e-26
23CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl... 116 1e-26
24CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast... 116 1e-26
25CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast... 116 1e-26
26CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop... 116 1e-26
27CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop... 116 1e-26
28CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast... 116 2e-26
29CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla... 115 2e-26
30CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla... 115 2e-26
31CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ... 115 2e-26
32CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl... 115 2e-26
33CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla... 115 2e-26
34CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla... 115 4e-26
35CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl... 114 5e-26
36CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast... 114 5e-26
37CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl... 114 5e-26
38CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl... 114 5e-26
39CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla... 114 7e-26
40CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla... 113 1e-25
41CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl... 113 1e-25
42CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl... 113 2e-25
43CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl... 112 3e-25
44CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast... 111 5e-25
45CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop... 111 5e-25
46CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 membe... 111 5e-25
47CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast... 111 6e-25
48CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chlo... 111 6e-25
49CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla... 111 6e-25
50CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty... 111 6e-25
51CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloropla... 110 1e-24
52CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast... 109 2e-24
53CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop... 109 2e-24
54CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe... 108 4e-24
55CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla... 108 4e-24
56CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ... 102 3e-22
57CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl... 101 5e-22
58CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ... 99 3e-21
59CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type... 95 4e-20
60CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type... 93 2e-19
61CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type... 92 3e-19
62CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type... 92 5e-19
63CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chlorop... 83 2e-16
64CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloro... 72 3e-13
65CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloropla... 70 1e-12
66CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII typ... 67 2e-11
67CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloropl... 59 3e-09
68CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chlo... 58 8e-09
69CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chlo... 57 1e-08
70CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast... 55 4e-08
71CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloropla... 55 4e-08
72CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloropla... 55 7e-08
73LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins pre... 45 4e-05
74LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins pre... 44 1e-04
75CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29 41 7e-04
76CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chlo... 38 0.006
77L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chlor... 33 0.20
78FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, ... 30 2.3 
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor|
           (LHCII type I CAB-3B) (LHCP) (Fragments)
          Length = 267

 Score =  119 bits (299), Expect = 2e-27
 Identities = 58/64 (90%), Positives = 58/64 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQAIVTGKGPLENLADHIADPVN  AWAFATNF
Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNF 263

Query: 20  VPGK 9
           VPGK
Sbjct: 264 VPGK 267
to top
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor|
           (LHCII type I CAB-3A) (LHCP) (Fragments)
          Length = 267

 Score =  119 bits (299), Expect = 2e-27
 Identities = 58/64 (90%), Positives = 58/64 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQAIVTGKGPLENLADHIADPVN  AWAFATNF
Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAFATNF 263

Query: 20  VPGK 9
           VPGK
Sbjct: 264 VPGK 267
to top
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
           (LHCII type I CAB-25) (LHCP)
          Length = 266

 Score =  119 bits (297), Expect = 3e-27
 Identities = 57/64 (89%), Positives = 58/64 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQAIVTGKGPLENLADH+ADPVN  AWAFATNF
Sbjct: 203 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 262

Query: 20  VPGK 9
           VPGK
Sbjct: 263 VPGK 266
to top
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 266

 Score =  119 bits (297), Expect = 3e-27
 Identities = 57/64 (89%), Positives = 58/64 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQAIVTGKGPLENLADH+ADPVN  AWAFATNF
Sbjct: 203 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 262

Query: 20  VPGK 9
           VPGK
Sbjct: 263 VPGK 266
to top
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor|
           (LHCII type I CAB-1C) (LHCP) (Fragments)
          Length = 265

 Score =  119 bits (297), Expect = 3e-27
 Identities = 57/64 (89%), Positives = 58/64 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQAIVTGKGPLENLADH+ADPVN  AWAFATNF
Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 261

Query: 20  VPGK 9
           VPGK
Sbjct: 262 VPGK 265
to top
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
           (LHCII type I CAB-1B) (LHCP)
          Length = 265

 Score =  119 bits (297), Expect = 3e-27
 Identities = 57/64 (89%), Positives = 58/64 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQAIVTGKGPLENLADH+ADPVN  AWAFATNF
Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 261

Query: 20  VPGK 9
           VPGK
Sbjct: 262 VPGK 265
to top
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type I CAB-1A) (LHCP) (Fragments)
          Length = 265

 Score =  119 bits (297), Expect = 3e-27
 Identities = 57/64 (89%), Positives = 58/64 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQAIVTGKGPLENLADH+ADPVN  AWAFATNF
Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 261

Query: 20  VPGK 9
           VPGK
Sbjct: 262 VPGK 265
to top
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
           (LHCII type I CAB-3C) (LHCP)
          Length = 267

 Score =  119 bits (297), Expect = 3e-27
 Identities = 57/64 (89%), Positives = 58/64 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQAIVTGKGPLENLADH+ADPVN  AWAFATNF
Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 263

Query: 20  VPGK 9
           VPGK
Sbjct: 264 VPGK 267
to top
>CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein|
           (Chlorophyll a-b binding of LHCII type I protein) (CAB)
           (LHCP) (Fragment)
          Length = 124

 Score =  119 bits (297), Expect = 3e-27
 Identities = 57/64 (89%), Positives = 58/64 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQAIVTGKGPLENLADH+ADPVN  AWAFATNF
Sbjct: 61  DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 120

Query: 20  VPGK 9
           VPGK
Sbjct: 121 VPGK 124
to top
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 261

 Score =  117 bits (294), Expect = 6e-27
 Identities = 56/64 (87%), Positives = 58/64 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQAIVTGKGPLENLADH+ADPVN  AWA+ATNF
Sbjct: 198 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 257

Query: 20  VPGK 9
           VPGK
Sbjct: 258 VPGK 261
to top
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
           (LHCII type I CAB-21) (LHCP)
          Length = 265

 Score =  117 bits (294), Expect = 6e-27
 Identities = 56/64 (87%), Positives = 58/64 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQAIVTGKGPLENLADH+ADPVN  AWA+ATNF
Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 261

Query: 20  VPGK 9
           VPGK
Sbjct: 262 VPGK 265
to top
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 265

 Score =  117 bits (294), Expect = 6e-27
 Identities = 56/64 (87%), Positives = 58/64 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQAIVTGKGPLENLADH+ADPVN  AWA+ATNF
Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 261

Query: 20  VPGK 9
           VPGK
Sbjct: 262 VPGK 265
to top
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
           (LHCII type I CAB-40) (LHCP)
          Length = 267

 Score =  117 bits (294), Expect = 6e-27
 Identities = 56/64 (87%), Positives = 58/64 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQAIVTGKGPLENLADH+ADPVN  AWA+ATNF
Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 263

Query: 20  VPGK 9
           VPGK
Sbjct: 264 VPGK 267
to top
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
           (LHCII type I CAB-C) (LHCP)
          Length = 267

 Score =  117 bits (294), Expect = 6e-27
 Identities = 56/64 (87%), Positives = 58/64 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQAIVTGKGPLENLADH+ADPVN  AWA+ATNF
Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 263

Query: 20  VPGK 9
           VPGK
Sbjct: 264 VPGK 267
to top
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type I CAB-13) (LHCP)
          Length = 266

 Score =  117 bits (293), Expect = 8e-27
 Identities = 56/64 (87%), Positives = 58/64 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AEL+VKEIKNGRL MFS FGFFVQAIVTGKGPLENLADH+ADPVN  AWAFATNF
Sbjct: 203 DPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 262

Query: 20  VPGK 9
           VPGK
Sbjct: 263 VPGK 266
to top
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (CAB-140) (LHCP)
          Length = 267

 Score =  117 bits (293), Expect = 8e-27
 Identities = 55/64 (85%), Positives = 58/64 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKE+KNGRL MFS FGFFVQAIVTGKGP+ENLADH+ADPVN  AWAFATNF
Sbjct: 204 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNF 263

Query: 20  VPGK 9
           VPGK
Sbjct: 264 VPGK 267
to top
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
           precursor (LHCII type I CAB-165/180)
          Length = 267

 Score =  117 bits (293), Expect = 8e-27
 Identities = 55/64 (85%), Positives = 58/64 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKE+KNGRL MFS FGFFVQAIVTGKGP+ENLADH+ADPVN  AWAFATNF
Sbjct: 204 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAFATNF 263

Query: 20  VPGK 9
           VPGK
Sbjct: 264 VPGK 267
to top
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1A) (CAB) (LHCP)
          Length = 278

 Score =  117 bits (292), Expect = 1e-26
 Identities = 55/64 (85%), Positives = 58/64 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQAIVTGKGP+ENLADH+ADPVN  AWA+ATNF
Sbjct: 215 DPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNF 274

Query: 20  VPGK 9
           VPGK
Sbjct: 275 VPGK 278
to top
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP) (Fragment)
          Length = 255

 Score =  117 bits (292), Expect = 1e-26
 Identities = 55/64 (85%), Positives = 58/64 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKE+KNGRL MFS FGFFVQAIVTGKGPLENLADH+ADPVN  AWA+ATNF
Sbjct: 192 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 251

Query: 20  VPGK 9
           VPGK
Sbjct: 252 VPGK 255
to top
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1B) (CAB) (LHCP)
          Length = 274

 Score =  117 bits (292), Expect = 1e-26
 Identities = 55/64 (85%), Positives = 58/64 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQAIVTGKGP+ENLADH+ADPVN  AWA+ATNF
Sbjct: 211 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNF 270

Query: 20  VPGK 9
           VPGK
Sbjct: 271 VPGK 274
to top
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 206

 Score =  117 bits (292), Expect = 1e-26
 Identities = 55/64 (85%), Positives = 58/64 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKE+KNGRL MFS FGFFVQAIVTGKGPLENLADH+ADPVN  AWA+ATNF
Sbjct: 143 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 202

Query: 20  VPGK 9
           VPGK
Sbjct: 203 VPGK 206
to top
>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)|
           (LHCP) (Fragment)
          Length = 116

 Score =  116 bits (291), Expect = 1e-26
 Identities = 55/64 (85%), Positives = 58/64 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQAIVTGKGPLENLADH+ADPVN  AW++ATNF
Sbjct: 53  DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNF 112

Query: 20  VPGK 9
           VPGK
Sbjct: 113 VPGK 116
to top
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
           (LHCII type I CAB-16) (LHCP)
          Length = 266

 Score =  116 bits (291), Expect = 1e-26
 Identities = 55/64 (85%), Positives = 58/64 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQAIVTGKGPLENLADH+ADPVN  AW++ATNF
Sbjct: 203 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNF 262

Query: 20  VPGK 9
           VPGK
Sbjct: 263 VPGK 266
to top
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
           (Allergen Api g 3)
          Length = 264

 Score =  116 bits (291), Expect = 1e-26
 Identities = 55/64 (85%), Positives = 57/64 (89%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP   AELKVKE+KNGRL MFS FGFFVQAIVTGKGPLENLADH+ADPVN  AWAFATNF
Sbjct: 201 DPERSAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 260

Query: 20  VPGK 9
           VPGK
Sbjct: 261 VPGK 264
to top
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 267

 Score =  116 bits (291), Expect = 1e-26
 Identities = 56/64 (87%), Positives = 57/64 (89%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQAIVTGKGPLENLADH+ADPVN  AW FATNF
Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWNFATNF 263

Query: 20  VPGK 9
           VPGK
Sbjct: 264 VPGK 267
to top
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
           (LHCII type I CAB-91R) (LHCP)
          Length = 267

 Score =  116 bits (291), Expect = 1e-26
 Identities = 55/64 (85%), Positives = 58/64 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQAIVTGKGPLENLADH+ADPVN  AW++ATNF
Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNF 263

Query: 20  VPGK 9
           VPGK
Sbjct: 264 VPGK 267
to top
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
           (LHCII type I CAB-22R) (LHCP)
          Length = 267

 Score =  116 bits (291), Expect = 1e-26
 Identities = 55/64 (85%), Positives = 58/64 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQAIVTGKGPLENLADH+ADPVN  AW++ATNF
Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNF 263

Query: 20  VPGK 9
           VPGK
Sbjct: 264 VPGK 267
to top
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 245

 Score =  116 bits (290), Expect = 2e-26
 Identities = 55/64 (85%), Positives = 58/64 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQAIVTGKGPLENLADH+A+PVN  AWA+ATNF
Sbjct: 182 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAEPVNNNAWAYATNF 241

Query: 20  VPGK 9
           VPGK
Sbjct: 242 VPGK 245
to top
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
           (LHCII type I CAB-E) (LHCP)
          Length = 266

 Score =  115 bits (289), Expect = 2e-26
 Identities = 54/64 (84%), Positives = 58/64 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQA+VTGKGPLENLADH+ADPVN  AW++ATNF
Sbjct: 203 DPEAFAELKVKEIKNGRLAMFSMFGFFVQALVTGKGPLENLADHLADPVNNNAWSYATNF 262

Query: 20  VPGK 9
           VPGK
Sbjct: 263 VPGK 266
to top
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 264

 Score =  115 bits (289), Expect = 2e-26
 Identities = 56/64 (87%), Positives = 57/64 (89%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           D  A AELKVKEIKNGRL MFS FGFFVQAIVTGKGPLENLADH+ADPVN  AWAFATNF
Sbjct: 201 DAEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNF 260

Query: 20  VPGK 9
           VPGK
Sbjct: 261 VPGK 264
to top
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 264

 Score =  115 bits (289), Expect = 2e-26
 Identities = 56/64 (87%), Positives = 57/64 (89%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQAIVTGKGP+ENLADHIADPV   AWAFATNF
Sbjct: 201 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHIADPVANNAWAFATNF 260

Query: 20  VPGK 9
           VPGK
Sbjct: 261 VPGK 264
to top
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score =  115 bits (289), Expect = 2e-26
 Identities = 54/64 (84%), Positives = 58/64 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKE+KNGRL MFS FGFFVQAIVTGKGPLENLADH+ADPVN  AW++ATNF
Sbjct: 206 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNF 265

Query: 20  VPGK 9
           VPGK
Sbjct: 266 VPGK 269
to top
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 262

 Score =  115 bits (289), Expect = 2e-26
 Identities = 55/63 (87%), Positives = 57/63 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKE+KNGRL MFS FGFFVQAIVTGKGPLENLADHIADPVN  AWA+ATNF
Sbjct: 199 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNF 258

Query: 20  VPG 12
           VPG
Sbjct: 259 VPG 261
to top
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCII type I CAB-7) (LHCP)
          Length = 267

 Score =  115 bits (287), Expect = 4e-26
 Identities = 54/64 (84%), Positives = 57/64 (89%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQAIVTGKGPL+NL DH+ADPVN  AWA+ATNF
Sbjct: 204 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPVNNNAWAYATNF 263

Query: 20  VPGK 9
           VPGK
Sbjct: 264 VPGK 267
to top
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
           (LHCII type I CAB-M9) (LHCP)
          Length = 265

 Score =  114 bits (286), Expect = 5e-26
 Identities = 53/64 (82%), Positives = 58/64 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A A++KVKE+KNGRL MFS FGFFVQAIVTGKGPLENLADH+ADPVN  AWA+ATNF
Sbjct: 202 DPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNF 261

Query: 20  VPGK 9
           VPGK
Sbjct: 262 VPGK 265
to top
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCII type I CAB-8)
          Length = 268

 Score =  114 bits (286), Expect = 5e-26
 Identities = 53/64 (82%), Positives = 58/64 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKE+KNGRL MFS FGFFVQAIVTGKGPLENLADH++DPVN  AW++ATNF
Sbjct: 205 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLSDPVNNNAWSYATNF 264

Query: 20  VPGK 9
           VPGK
Sbjct: 265 VPGK 268
to top
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
           (LHCII type I CAB-50) (LHCP)
          Length = 267

 Score =  114 bits (286), Expect = 5e-26
 Identities = 54/64 (84%), Positives = 57/64 (89%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVK IKNGRL MFS FGFFVQAIVTGKGPLENLADH+ADPVN  AW++ATNF
Sbjct: 204 DPEAFAELKVKHIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNF 263

Query: 20  VPGK 9
           VPGK
Sbjct: 264 VPGK 267
to top
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type II CAB-1A) (LHCP)
          Length = 278

 Score =  114 bits (286), Expect = 5e-26
 Identities = 53/64 (82%), Positives = 58/64 (90%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A A++KVKEIKNGRL MFS FGFFVQAIVTGKGP+ENLADH+ADPVN  AWA+ATNF
Sbjct: 215 DPDAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLADPVNNNAWAYATNF 274

Query: 20  VPGK 9
           VPGK
Sbjct: 275 VPGK 278
to top
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
           (LHCII type I CAB-3) (LHCP)
          Length = 263

 Score =  114 bits (285), Expect = 7e-26
 Identities = 54/64 (84%), Positives = 57/64 (89%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKE+KNGRL MFS FGFFVQAIVTGKGPLENLADH+A PVN  AWA+ATNF
Sbjct: 200 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAGPVNNNAWAYATNF 259

Query: 20  VPGK 9
           VPGK
Sbjct: 260 VPGK 263
to top
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
           (LHCII type I CAB-5) (LHCP) (Fragment)
          Length = 237

 Score =  113 bits (283), Expect = 1e-25
 Identities = 54/64 (84%), Positives = 57/64 (89%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQAIVTGKGP+ENL+DHIADPV   AWA+ATNF
Sbjct: 174 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPVANNAWAYATNF 233

Query: 20  VPGK 9
           VPGK
Sbjct: 234 VPGK 237
to top
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
           (LHCII type I CAB-48) (LHCP)
          Length = 264

 Score =  113 bits (283), Expect = 1e-25
 Identities = 53/64 (82%), Positives = 56/64 (87%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP   AELKVKEIKNGRL MFS FGFFVQAIVTGKGP+ENLADH+ DPVN  AWA+ATNF
Sbjct: 201 DPERFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLTDPVNNNAWAYATNF 260

Query: 20  VPGK 9
           VPGK
Sbjct: 261 VPGK 264
to top
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
           (LHCII type I CAB-37) (LHCP)
          Length = 265

 Score =  113 bits (282), Expect = 2e-25
 Identities = 54/64 (84%), Positives = 56/64 (87%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQAIVTGKGP+ENL DH+ADPV   AWAFATNF
Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADPVANNAWAFATNF 261

Query: 20  VPGK 9
           VPGK
Sbjct: 262 VPGK 265
to top
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
           (LHCII type I CAB-36) (LHCP)
          Length = 265

 Score =  112 bits (279), Expect = 3e-25
 Identities = 53/64 (82%), Positives = 56/64 (87%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQAIVTGKGP+ENL DH+ADPV   AWA+ATNF
Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNF 261

Query: 20  VPGK 9
           VPGK
Sbjct: 262 VPGK 265
to top
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 265

 Score =  111 bits (278), Expect = 5e-25
 Identities = 53/64 (82%), Positives = 55/64 (85%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A  ELKVKE+K GRL M S FGFFVQAIVTGKGPLENLADHIADPVN  AWA+ATNF
Sbjct: 202 DPEAFGELKVKELKKGRLAMLSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNF 261

Query: 20  VPGK 9
           VPGK
Sbjct: 262 VPGK 265
to top
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
           (LHCII type II CAB-151) (LHCP)
          Length = 265

 Score =  111 bits (278), Expect = 5e-25
 Identities = 53/64 (82%), Positives = 56/64 (87%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQAIVTGKGP+ENL DH+ADPV   AWA+ATNF
Sbjct: 202 DPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWAYATNF 261

Query: 20  VPGK 9
           VPGK
Sbjct: 262 VPGK 265
to top
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2|
           (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP)
           (Fragment)
          Length = 150

 Score =  111 bits (278), Expect = 5e-25
 Identities = 53/64 (82%), Positives = 56/64 (87%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQAIVTGKGP+ENL DH+ADPV   AWA+ATNF
Sbjct: 87  DPEAKAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNF 146

Query: 20  VPGK 9
           VPGK
Sbjct: 147 VPGK 150
to top
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 266

 Score =  111 bits (277), Expect = 6e-25
 Identities = 54/63 (85%), Positives = 55/63 (87%)
 Frame = -3

Query: 197 PXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNFV 18
           P A AELKVKEIKNGRL MFS FGFFVQAIVTGKGPLE+LADHIADPVN  AW  ATNFV
Sbjct: 204 PQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVNNNAWLIATNFV 263

Query: 17  PGK 9
           PGK
Sbjct: 264 PGK 266
to top
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast|
           precursor (CAB) (LHCP)
          Length = 266

 Score =  111 bits (277), Expect = 6e-25
 Identities = 53/64 (82%), Positives = 56/64 (87%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQAIVTGKGP+ENL DH+ADPV   AWA+ATNF
Sbjct: 203 DPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNF 262

Query: 20  VPGK 9
           VPGK
Sbjct: 263 VPGK 266
to top
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCII type I CAB-4) (LHCP)
          Length = 265

 Score =  111 bits (277), Expect = 6e-25
 Identities = 53/64 (82%), Positives = 56/64 (87%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKEIKNGRL MFS FGFFVQAIVTGKGP+ENL+DHI DPV   AWA+ATNF
Sbjct: 202 DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHINDPVANNAWAYATNF 261

Query: 20  VPGK 9
           VPGK
Sbjct: 262 VPGK 265
to top
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I|
           CAB-AB96) (LHCP) (Major 15) (Fragment)
          Length = 228

 Score =  111 bits (277), Expect = 6e-25
 Identities = 52/63 (82%), Positives = 56/63 (88%)
 Frame = -3

Query: 197 PXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNFV 18
           P A AELKVKE+KNGRL MFS FGFFV AIVTGKGPLENLADH+ADPVN  AW++ATNFV
Sbjct: 166 PEAFAELKVKELKNGRLAMFSMFGFFVPAIVTGKGPLENLADHLADPVNNNAWSYATNFV 225

Query: 17  PGK 9
           PGK
Sbjct: 226 PGK 228
to top
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 256

 Score =  110 bits (275), Expect = 1e-24
 Identities = 52/64 (81%), Positives = 55/64 (85%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKE+KNGRL MFS FGFFVQAIVTGKGPLENLADH+ADPVN  AWA+AT  
Sbjct: 193 DPEALAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATKL 252

Query: 20  VPGK 9
            PGK
Sbjct: 253 CPGK 256
to top
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 263

 Score =  109 bits (273), Expect = 2e-24
 Identities = 51/64 (79%), Positives = 55/64 (85%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP   AELKVKE+KNGRL MFS FGFFVQAIVTGKGP+ENL DH+ADPV   AWA+ATNF
Sbjct: 200 DPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNF 259

Query: 20  VPGK 9
           VPGK
Sbjct: 260 VPGK 263
to top
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
           (LHCII type I CAB-22L) (LHCP)
          Length = 267

 Score =  109 bits (273), Expect = 2e-24
 Identities = 51/64 (79%), Positives = 55/64 (85%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKE KNGRL MFS FGFF+QAIVTGKGPLENLADH+ DPVN  AW++ATNF
Sbjct: 204 DPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGPLENLADHLVDPVNNNAWSYATNF 263

Query: 20  VPGK 9
           VP K
Sbjct: 264 VPRK 267
to top
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
           chloroplast precursor (DE Chlorophyll a-b binding
           protein type I F3) (CAB-F3) (LHCP)
          Length = 265

 Score =  108 bits (270), Expect = 4e-24
 Identities = 50/64 (78%), Positives = 55/64 (85%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP A AELKVKE+KNGRL MFS FGFFVQAIVTGKGP+ENL+DH+ADP    AWA+ATNF
Sbjct: 202 DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHLADPAVNNAWAYATNF 261

Query: 20  VPGK 9
            PGK
Sbjct: 262 TPGK 265
to top
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
           (LHCII type II CAB-215) (LHCP)
          Length = 265

 Score =  108 bits (270), Expect = 4e-24
 Identities = 50/64 (78%), Positives = 56/64 (87%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP + AELKVKE+KNGRL MFS FGFFVQAIVTGKGP++NL DH+ADPV   AWAFATNF
Sbjct: 202 DPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAFATNF 261

Query: 20  VPGK 9
           VPG+
Sbjct: 262 VPGQ 265
to top
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
           chloroplast precursor (CAB)
          Length = 268

 Score =  102 bits (254), Expect = 3e-22
 Identities = 49/63 (77%), Positives = 50/63 (79%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP   AELKVKEIKNGRL MFS FGFFVQAIVTGKGPLENL DH+ DPV   AW FAT F
Sbjct: 205 DPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVANNAWVFATKF 264

Query: 20  VPG 12
            PG
Sbjct: 265 APG 267
to top
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type III CAB-13)
          Length = 265

 Score =  101 bits (252), Expect = 5e-22
 Identities = 48/63 (76%), Positives = 51/63 (80%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP   AELKVKEIKNGRL MFS FGFFVQAIVTGKGPLENL DH+ +PV   AW +AT F
Sbjct: 202 DPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKF 261

Query: 20  VPG 12
           VPG
Sbjct: 262 VPG 264
to top
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 269

 Score = 99.0 bits (245), Expect = 3e-21
 Identities = 48/63 (76%), Positives = 50/63 (79%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP   AELKVKEIKNGRL MFS FGFFVQAIVTGKGPLENL DH+ADPV   AWA+A   
Sbjct: 205 DPDTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLNDHLADPVANNAWAYAPTS 264

Query: 20  VPG 12
            PG
Sbjct: 265 PPG 267
to top
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 256

 Score = 95.1 bits (235), Expect = 4e-20
 Identities = 46/62 (74%), Positives = 50/62 (80%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP   AELKVKEIKNGRL MFS FGFFVQAIVTGKGP++NLADH+ADP    A+A AT F
Sbjct: 193 DPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADPGTNNAFAAATKF 252

Query: 20  VP 15
            P
Sbjct: 253 TP 254
to top
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 93.2 bits (230), Expect = 2e-19
 Identities = 45/63 (71%), Positives = 49/63 (77%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP   AELKVKEIKNGRL MFS  GFFVQAIVTGKGP++NL DH+ADP    A+A AT F
Sbjct: 190 DPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNKAFASATKF 249

Query: 20  VPG 12
            PG
Sbjct: 250 TPG 252
to top
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 273

 Score = 92.4 bits (228), Expect = 3e-19
 Identities = 43/62 (69%), Positives = 49/62 (79%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP   AELKVKEIKNGRL MF+  GFFVQAIVTGKGP+ENL DH+A+P    A+A+AT F
Sbjct: 211 DPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANPAENNAFAYATKF 270

Query: 20  VP 15
            P
Sbjct: 271 TP 272
to top
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 91.7 bits (226), Expect = 5e-19
 Identities = 44/62 (70%), Positives = 49/62 (79%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           DP   AELKVKEIKNGRL  FS FGFFVQAIVTGKGP++NL DH+A+P    A+AFAT F
Sbjct: 190 DPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTGKGPVQNLDDHLANPTVNNAFAFATKF 249

Query: 20  VP 15
            P
Sbjct: 250 TP 251
to top
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast|
           precursor (LHCII type I CAB-AB10) (LHCP)
          Length = 268

 Score = 82.8 bits (203), Expect = 2e-16
 Identities = 43/63 (68%), Positives = 47/63 (74%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWAFATNF 21
           D  A AELKVKE+KNGRL MFS FGFFVQAIV+ K  LENLADH+   VN  A +  TNF
Sbjct: 205 DTEAFAELKVKELKNGRLAMFSMFGFFVQAIVSRKDRLENLADHLGWTVNNNALSNVTNF 264

Query: 20  VPG 12
           VPG
Sbjct: 265 VPG 267
to top
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast|
           precursor (Light-harvesting complex II protein 5)
           (LHCB5) (LHCIIc)
          Length = 280

 Score = 72.4 bits (176), Expect = 3e-13
 Identities = 33/48 (68%), Positives = 39/48 (81%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADP 57
           DP   A LKVKEIKNGRL MF+  GFF+QA VTG+GP+ENLA H++DP
Sbjct: 214 DPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDP 261
to top
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCI type III CAB-8)
          Length = 273

 Score = 70.5 bits (171), Expect = 1e-12
 Identities = 31/50 (62%), Positives = 39/50 (78%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVN 51
           D  +  ELK+KEIKNGRL M +  G+F+QA+VTG GP +NL DH+ADPVN
Sbjct: 214 DEKSMKELKLKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVN 263
to top
>CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 127

 Score = 66.6 bits (161), Expect = 2e-11
 Identities = 34/63 (53%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADP-VNXXAWAFATN 24
           DP    ELKVKEIKNGRL M    GF+ QAIVTG+GP+EN   H+ DP  +    A  T 
Sbjct: 59  DPDTFPELKVKEIKNGRLAMSGMLGFYAQAIVTGEGPVENWLYHLQDPSAHNGLTALVTQ 118

Query: 23  FVP 15
           F P
Sbjct: 119 FAP 121
to top
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor|
           (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa
           protein)
          Length = 246

 Score = 58.9 bits (141), Expect = 3e-09
 Identities = 30/49 (61%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFV-QAIVTGKGPLENLADHIADP 57
           DP    ELKVKEIKNGRL + +  GF V Q+   G GPLENLA H+ADP
Sbjct: 181 DPAKFEELKVKEIKNGRLALLAIVGFCVQQSAYLGTGPLENLATHLADP 229
to top
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast|
           precursor (LHCII protein 4.1) (LHCB4.1)
          Length = 290

 Score = 57.8 bits (138), Expect = 8e-09
 Identities = 26/50 (52%), Positives = 35/50 (70%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVN 51
           DP   A+L++ EIK+ RL M +  GF VQA  TGKGPL N A H++DP++
Sbjct: 231 DPEKTAQLQLAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLH 280
to top
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast|
           precursor (LHCII protein 4.2) (LHCB4.2)
          Length = 287

 Score = 57.0 bits (136), Expect = 1e-08
 Identities = 26/50 (52%), Positives = 34/50 (68%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVN 51
           DP   A+L++ EIK+ RL M    GF VQA  TGKGPL N A H++DP++
Sbjct: 228 DPVKKAQLQLAEIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLH 277
to top
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCI type II CAB)
          Length = 270

 Score = 55.5 bits (132), Expect = 4e-08
 Identities = 26/54 (48%), Positives = 34/54 (62%)
 Frame = -3

Query: 197 PXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWA 36
           P    EL+ KEIKNGRL M +  G + Q I TG GP++NL  H+ADP +   +A
Sbjct: 212 PAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFA 265
to top
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCI type II CAB-7)
          Length = 270

 Score = 55.5 bits (132), Expect = 4e-08
 Identities = 26/54 (48%), Positives = 34/54 (62%)
 Frame = -3

Query: 197 PXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVNXXAWA 36
           P    EL+ KEIKNGRL M +  G + Q I TG GP++NL  H+ADP +   +A
Sbjct: 212 PAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFA 265
to top
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCI type III CAB-4) (LHCP)
          Length = 251

 Score = 54.7 bits (130), Expect = 7e-08
 Identities = 25/42 (59%), Positives = 29/42 (69%)
 Frame = -3

Query: 182 ELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADP 57
           E K KE+ NGRL M +  GF VQ  VTGKGP ENL  H++DP
Sbjct: 200 EAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDP 241
to top
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor|
           [Contains: LH35 protein 1; LH35 protein 2] (Fragment)
          Length = 331

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 21/41 (51%), Positives = 26/41 (63%)
 Frame = -3

Query: 176 KVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPV 54
           K  EIKNGRL M   FG  VQ  VT +GP+ NL +H+  P+
Sbjct: 94  KAAEIKNGRLAMIGMFGLEVQNHVTAQGPVANLIEHLRHPL 134



 Score = 45.1 bits (105), Expect = 5e-05
 Identities = 21/39 (53%), Positives = 25/39 (64%)
 Frame = -3

Query: 170 KEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPV 54
           +EIKNGRL M    G   Q + TG+ PL NLA H A+PV
Sbjct: 284 REIKNGRLAMTGLLGLTFQYLATGESPLANLAAHFANPV 322
to top
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor|
           [Contains: LH38 protein 1; LH38 protein 2; LH38 protein
           3] (Fragment)
          Length = 530

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 21/41 (51%), Positives = 26/41 (63%)
 Frame = -3

Query: 176 KVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPV 54
           K  EIKNGRL + +  GF VQ  V G  PL NLA+H+  P+
Sbjct: 123 KEAEIKNGRLALTALLGFEVQRHVVGGSPLANLAEHLQQPL 163



 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 21/35 (60%), Positives = 23/35 (65%)
 Frame = -3

Query: 176 KVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLAD 72
           K  EIKNGRL M   FG  VQ+ VTGK P+ NL D
Sbjct: 496 KEAEIKNGRLAMNGMFGLEVQSHVTGKSPINNLID 530



 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 17/41 (41%), Positives = 27/41 (65%)
 Frame = -3

Query: 176 KVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPV 54
           +  E+KNGRL + +  G   Q + TG+ PL NL+ H+A+P+
Sbjct: 311 RAAEVKNGRLALTAVAGLTAQYLATGESPLANLSAHLANPI 351



 Score = 28.1 bits (61), Expect = 6.6
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHI 66
           DP   A ++V E+ +GRL M    G  V  ++ GKG      D +
Sbjct: 218 DPDVYARMRVAEVFHGRLAMLCTVGCIVPELL-GKGAWFEAGDSV 261
to top
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29|
          Length = 279

 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 24/50 (48%), Positives = 30/50 (60%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLADHIADPVN 51
           D      LK  EIK+ RL M S FG+ VQA+ TG+G L +LA   AD +N
Sbjct: 226 DEERAFRLKTAEIKHARLAMVSFFGYGVQALSTGEGALGSLA-KFADGLN 274
to top
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast|
           precursor (LHCII protein 4.3) (LHCB4.3)
          Length = 276

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 20/42 (47%), Positives = 25/42 (59%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTGKGPLENLA 75
           DP     LK+ EIK+ RL M +   F +QA  TGKGP+  LA
Sbjct: 231 DPEKLDTLKLAEIKHSRLAMVAFLIFALQAAFTGKGPVSFLA 272
to top
>L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chloroplast|
           precursor
          Length = 270

 Score = 33.1 bits (74), Expect = 0.20
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAI 108
           DP    EL+ KE+ NGRL M +  GF +Q +
Sbjct: 194 DPEELRELQTKELNNGRLAMIAIAGFVLQEV 224
to top
>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast|
           precursor (FCP)
          Length = 208

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -3

Query: 200 DPXAXAELKVKEIKNGRLXMFSXFGFFVQAIVTG 99
           DP     ++ KE+ +GRL M +  GF  Q  V+G
Sbjct: 163 DPDEFRLMQEKELSHGRLAMIAAAGFLAQEAVSG 196


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.127    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,572,780
Number of Sequences: 219361
Number of extensions: 310299
Number of successful extensions: 833
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 832
length of database: 80,573,946
effective HSP length: 43
effective length of database: 71,141,423
effective search space used: 1707394152
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top