ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags15i08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_479398.1| Oryza sativa (japonica cultivar-group), mRNA 214 3e-52
2ref|XM_506533.1| PREDICTED Oryza sativa (japonica cultivar-group... 214 3e-52
3dbj|AK104043.1| Oryza sativa (japonica cultivar-group) cDNA clon... 214 3e-52
4dbj|AK100911.1| Oryza sativa (japonica cultivar-group) cDNA clon... 214 3e-52
5dbj|AK100264.1| Oryza sativa (japonica cultivar-group) cDNA clon... 214 3e-52
6dbj|AB042102.1| Oryza sativa SEC31 mRNA, complete cds 214 3e-52
7dbj|AK072927.1| Oryza sativa (japonica cultivar-group) cDNA clon... 204 3e-49
8gb|AY596611.1| Saccharum officinarum clone SCCCCL4015D05, comple... 165 3e-37
9dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 163 1e-36
10dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic D... 163 1e-36
11gb|AC113312.7| Mus musculus chromosome 7, clone RP23-440K7, comp... 44 0.64
12emb|AL807781.6| Human DNA sequence from clone RP11-264P13 on chr... 44 0.64
13dbj|AK133737.1| Mus musculus 8 days embryo whole body cDNA, RIKE... 44 0.64
14dbj|AK163265.1| Mus musculus 2 cells egg cDNA, RIKEN full-length... 44 0.64
15dbj|AK158571.1| Mus musculus visual cortex cDNA, RIKEN full-leng... 44 0.64
16dbj|AK029831.1| Mus musculus adult male testis cDNA, RIKEN full-... 44 0.64
17dbj|AK018351.1| Mus musculus 12 days embryo female ovary cDNA, R... 44 0.64
18emb|BX663522.8| Zebrafish DNA sequence from clone CH211-261E11 i... 44 0.64
19emb|BX470230.5| Zebrafish DNA sequence from clone CH211-284B12 i... 44 0.64
20gb|AC122017.5| Mus musculus BAC clone RP24-361J4 from 7, complet... 44 0.64
21gb|AE014839.1| Plasmodium falciparum 3D7 chromosome 11 section 4... 42 2.5
22emb|CR548612.1| Paramecium tetraurelia macronuclear largest chro... 42 2.5
23gb|AC173452.3| Papio anubis clone RP41-379N3, complete sequence 42 2.5
24emb|BX897662.16| Zebrafish DNA sequence from clone DKEYP-118G6, ... 42 2.5
25ref|XM_692130.1| PREDICTED: Danio rerio similar to low density l... 42 2.5
26emb|BX470176.11| Zebrafish DNA sequence from clone CH211-120C23 ... 42 2.5
27gb|AC159930.3| Papio anubis clone RP41-174M1, complete sequence 42 2.5
28gb|AC011450.4|AC011450 Homo sapiens chromosome 19 clone CTC-301O... 42 2.5
29emb|BX119915.8| Zebrafish DNA sequence from clone CH211-10J20 in... 42 2.5

>ref|XM_479398.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3881

 Score =  214 bits (108), Expect = 3e-52
 Identities = 246/292 (84%)
 Strand = Plus / Minus

                                                                        
Query: 416  tttacactctgaagctttgccttgtcttgatcatgcgcttcaatgatgagagccaaaagt 475
            |||||| ||||||  | ||||| ||||||||||| ||||||||||  |  ||||| ||||
Sbjct: 3465 tttacattctgaaattctgcctcgtcttgatcatacgcttcaatgcggcaagccagaagt 3406

                                                                        
Query: 476  tgcactcgtcccaatcactggtcgtcagaagaatctgaagttgcatcgcggtggcaaaat 535
            ||||||||||||| || || || |||||||| | |||||| |||||||| ||||||||||
Sbjct: 3405 tgcactcgtcccagtcgctcgttgtcagaagtacctgaaggtgcatcgcagtggcaaaat 3346

                                                                        
Query: 536  cactactatcaagtgcactgcacatctgaatgagttttgatgaaacatttggagatatat 595
            |||  ||||||||||||||||| | ||||||||||||||||||||| |||||||||||||
Sbjct: 3345 caccgctatcaagtgcactgcaaagctgaatgagttttgatgaaacgtttggagatatat 3286

                                                                        
Query: 596  ctccagtgttgagtttcgcaaataacgccccaatcttctttgagttgtcttcaatttcac 655
            | ||||  |||||||| |||||||  |  || |||||  ||||||||||||| |||||||
Sbjct: 3285 ccccagaattgagttttgcaaatagtgttccgatctttcttgagttgtcttcgatttcac 3226

                                                                
Query: 656  gttttttagcgggtgcgcctcccaaggctttggatgtctcatcaaatagtct 707
            |||||||| |  |||  || ||||  ||||| ||||| ||||||||||||||
Sbjct: 3225 gttttttaacttgtgatccacccatagctttagatgtttcatcaaatagtct 3174



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>ref|XM_506533.1| PREDICTED Oryza sativa (japonica cultivar-group), P0047B07.120 mRNA
          Length = 3906

 Score =  214 bits (108), Expect = 3e-52
 Identities = 246/292 (84%)
 Strand = Plus / Minus

                                                                        
Query: 416  tttacactctgaagctttgccttgtcttgatcatgcgcttcaatgatgagagccaaaagt 475
            |||||| ||||||  | ||||| ||||||||||| ||||||||||  |  ||||| ||||
Sbjct: 3527 tttacattctgaaattctgcctcgtcttgatcatacgcttcaatgcggcaagccagaagt 3468

                                                                        
Query: 476  tgcactcgtcccaatcactggtcgtcagaagaatctgaagttgcatcgcggtggcaaaat 535
            ||||||||||||| || || || |||||||| | |||||| |||||||| ||||||||||
Sbjct: 3467 tgcactcgtcccagtcgctcgttgtcagaagtacctgaaggtgcatcgcagtggcaaaat 3408

                                                                        
Query: 536  cactactatcaagtgcactgcacatctgaatgagttttgatgaaacatttggagatatat 595
            |||  ||||||||||||||||| | ||||||||||||||||||||| |||||||||||||
Sbjct: 3407 caccgctatcaagtgcactgcaaagctgaatgagttttgatgaaacgtttggagatatat 3348

                                                                        
Query: 596  ctccagtgttgagtttcgcaaataacgccccaatcttctttgagttgtcttcaatttcac 655
            | ||||  |||||||| |||||||  |  || |||||  ||||||||||||| |||||||
Sbjct: 3347 ccccagaattgagttttgcaaatagtgttccgatctttcttgagttgtcttcgatttcac 3288

                                                                
Query: 656  gttttttagcgggtgcgcctcccaaggctttggatgtctcatcaaatagtct 707
            |||||||| |  |||  || ||||  ||||| ||||| ||||||||||||||
Sbjct: 3287 gttttttaacttgtgatccacccatagctttagatgtttcatcaaatagtct 3236



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>dbj|AK104043.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-C10, full
            insert sequence
          Length = 2030

 Score =  214 bits (108), Expect = 3e-52
 Identities = 246/292 (84%)
 Strand = Plus / Minus

                                                                        
Query: 416  tttacactctgaagctttgccttgtcttgatcatgcgcttcaatgatgagagccaaaagt 475
            |||||| ||||||  | ||||| ||||||||||| ||||||||||  |  ||||| ||||
Sbjct: 1651 tttacattctgaaattctgcctcgtcttgatcatacgcttcaatgcggcaagccagaagt 1592

                                                                        
Query: 476  tgcactcgtcccaatcactggtcgtcagaagaatctgaagttgcatcgcggtggcaaaat 535
            ||||||||||||| || || || |||||||| | |||||| |||||||| ||||||||||
Sbjct: 1591 tgcactcgtcccagtcgctcgttgtcagaagtacctgaaggtgcatcgcagtggcaaaat 1532

                                                                        
Query: 536  cactactatcaagtgcactgcacatctgaatgagttttgatgaaacatttggagatatat 595
            |||  ||||||||||||||||| | ||||||||||||||||||||| |||||||||||||
Sbjct: 1531 caccgctatcaagtgcactgcaaagctgaatgagttttgatgaaacgtttggagatatat 1472

                                                                        
Query: 596  ctccagtgttgagtttcgcaaataacgccccaatcttctttgagttgtcttcaatttcac 655
            | ||||  |||||||| |||||||  |  || |||||  ||||||||||||| |||||||
Sbjct: 1471 ccccagaattgagttttgcaaatagtgttccgatctttcttgagttgtcttcgatttcac 1412

                                                                
Query: 656  gttttttagcgggtgcgcctcccaaggctttggatgtctcatcaaatagtct 707
            |||||||| |  |||  || ||||  ||||| ||||| ||||||||||||||
Sbjct: 1411 gttttttaacttgtgatccacccatagctttagatgtttcatcaaatagtct 1360



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>dbj|AK100911.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132O04, full
            insert sequence
          Length = 3881

 Score =  214 bits (108), Expect = 3e-52
 Identities = 246/292 (84%)
 Strand = Plus / Minus

                                                                        
Query: 416  tttacactctgaagctttgccttgtcttgatcatgcgcttcaatgatgagagccaaaagt 475
            |||||| ||||||  | ||||| ||||||||||| ||||||||||  |  ||||| ||||
Sbjct: 3465 tttacattctgaaattctgcctcgtcttgatcatacgcttcaatgcggcaagccagaagt 3406

                                                                        
Query: 476  tgcactcgtcccaatcactggtcgtcagaagaatctgaagttgcatcgcggtggcaaaat 535
            ||||||||||||| || || || |||||||| | |||||| |||||||| ||||||||||
Sbjct: 3405 tgcactcgtcccagtcgctcgttgtcagaagtacctgaaggtgcatcgcagtggcaaaat 3346

                                                                        
Query: 536  cactactatcaagtgcactgcacatctgaatgagttttgatgaaacatttggagatatat 595
            |||  ||||||||||||||||| | ||||||||||||||||||||| |||||||||||||
Sbjct: 3345 caccgctatcaagtgcactgcaaagctgaatgagttttgatgaaacgtttggagatatat 3286

                                                                        
Query: 596  ctccagtgttgagtttcgcaaataacgccccaatcttctttgagttgtcttcaatttcac 655
            | ||||  |||||||| |||||||  |  || |||||  ||||||||||||| |||||||
Sbjct: 3285 ccccagaattgagttttgcaaatagtgttccgatctttcttgagttgtcttcgatttcac 3226

                                                                
Query: 656  gttttttagcgggtgcgcctcccaaggctttggatgtctcatcaaatagtct 707
            |||||||| |  |||  || ||||  ||||| ||||| ||||||||||||||
Sbjct: 3225 gttttttaacttgtgatccacccatagctttagatgtttcatcaaatagtct 3174



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>dbj|AK100264.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064J03, full
            insert sequence
          Length = 2226

 Score =  214 bits (108), Expect = 3e-52
 Identities = 246/292 (84%)
 Strand = Plus / Minus

                                                                        
Query: 416  tttacactctgaagctttgccttgtcttgatcatgcgcttcaatgatgagagccaaaagt 475
            |||||| ||||||  | ||||| ||||||||||| ||||||||||  |  ||||| ||||
Sbjct: 1842 tttacattctgaaattctgcctcgtcttgatcatacgcttcaatgcggcaagccagaagt 1783

                                                                        
Query: 476  tgcactcgtcccaatcactggtcgtcagaagaatctgaagttgcatcgcggtggcaaaat 535
            ||||||||||||| || || || |||||||| | |||||| |||||||| ||||||||||
Sbjct: 1782 tgcactcgtcccagtcgctcgttgtcagaagtacctgaaggtgcatcgcagtggcaaaat 1723

                                                                        
Query: 536  cactactatcaagtgcactgcacatctgaatgagttttgatgaaacatttggagatatat 595
            |||  ||||||||||||||||| | ||||||||||||||||||||| |||||||||||||
Sbjct: 1722 caccgctatcaagtgcactgcaaagctgaatgagttttgatgaaacgtttggagatatat 1663

                                                                        
Query: 596  ctccagtgttgagtttcgcaaataacgccccaatcttctttgagttgtcttcaatttcac 655
            | ||||  |||||||| |||||||  |  || |||||  ||||||||||||| |||||||
Sbjct: 1662 ccccagaattgagttttgcaaatagtgttccgatctttcttgagttgtcttcgatttcac 1603

                                                                
Query: 656  gttttttagcgggtgcgcctcccaaggctttggatgtctcatcaaatagtct 707
            |||||||| |  |||  || ||||  ||||| ||||| ||||||||||||||
Sbjct: 1602 gttttttaacttgtgatccacccatagctttagatgtttcatcaaatagtct 1551



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>dbj|AB042102.1| Oryza sativa SEC31 mRNA, complete cds
          Length = 3694

 Score =  214 bits (108), Expect = 3e-52
 Identities = 246/292 (84%)
 Strand = Plus / Minus

                                                                        
Query: 416  tttacactctgaagctttgccttgtcttgatcatgcgcttcaatgatgagagccaaaagt 475
            |||||| ||||||  | ||||| ||||||||||| ||||||||||  |  ||||| ||||
Sbjct: 3283 tttacattctgaaattctgcctcgtcttgatcatacgcttcaatgcggcaagccagaagt 3224

                                                                        
Query: 476  tgcactcgtcccaatcactggtcgtcagaagaatctgaagttgcatcgcggtggcaaaat 535
            ||||||||||||| || || || |||||||| | |||||| |||||||| ||||||||||
Sbjct: 3223 tgcactcgtcccagtcgctcgttgtcagaagtacctgaaggtgcatcgcagtggcaaaat 3164

                                                                        
Query: 536  cactactatcaagtgcactgcacatctgaatgagttttgatgaaacatttggagatatat 595
            |||  ||||||||||||||||| | ||||||||||||||||||||| |||||||||||||
Sbjct: 3163 caccgctatcaagtgcactgcaaagctgaatgagttttgatgaaacgtttggagatatat 3104

                                                                        
Query: 596  ctccagtgttgagtttcgcaaataacgccccaatcttctttgagttgtcttcaatttcac 655
            | ||||  |||||||| |||||||  |  || |||||  ||||||||||||| |||||||
Sbjct: 3103 ccccagaattgagttttgcaaatagtgttccgatctttcttgagttgtcttcgatttcac 3044

                                                                
Query: 656  gttttttagcgggtgcgcctcccaaggctttggatgtctcatcaaatagtct 707
            |||||||| |  |||  || ||||  ||||| ||||| ||||||||||||||
Sbjct: 3043 gttttttaacttgtgatccacccatagctttagatgtttcatcaaatagtct 2992



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>dbj|AK072927.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143H22, full
            insert sequence
          Length = 3905

 Score =  204 bits (103), Expect = 3e-49
 Identities = 211/247 (85%)
 Strand = Plus / Minus

                                                                        
Query: 416  tttacactctgaagctttgccttgtcttgatcatgcgcttcaatgatgagagccaaaagt 475
            |||||| ||||||  | ||||| ||||||||||| ||||||||||  |  ||||| ||||
Sbjct: 3526 tttacattctgaaattctgcctcgtcttgatcatacgcttcaatgcggcaagccagaagt 3467

                                                                        
Query: 476  tgcactcgtcccaatcactggtcgtcagaagaatctgaagttgcatcgcggtggcaaaat 535
            ||||||||||||| || || || |||||||| | |||||| |||||||| ||||||||||
Sbjct: 3466 tgcactcgtcccagtcgctcgttgtcagaagtacctgaaggtgcatcgcagtggcaaaat 3407

                                                                        
Query: 536  cactactatcaagtgcactgcacatctgaatgagttttgatgaaacatttggagatatat 595
            |||  ||||||||||||||||| | ||||||||||||||||||||| |||||||||||||
Sbjct: 3406 caccgctatcaagtgcactgcaaagctgaatgagttttgatgaaacgtttggagatatat 3347

                                                                        
Query: 596  ctccagtgttgagtttcgcaaataacgccccaatcttctttgagttgtcttcaatttcac 655
            | ||||  |||||||| |||||||  |  || |||||  ||||||||||||| |||||||
Sbjct: 3346 ccccagaattgagttttgcaaatagtgttccgatctttcttgagttgtcttcgatttcac 3287

                   
Query: 656  gtttttt 662
            |||||||
Sbjct: 3286 gtttttt 3280



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>gb|AY596611.1| Saccharum officinarum clone SCCCCL4015D05, complete sequence
          Length = 1853

 Score =  165 bits (83), Expect = 3e-37
 Identities = 206/247 (83%)
 Strand = Plus / Minus

                                                                        
Query: 416  tttacactctgaagctttgccttgtcttgatcatgcgcttcaatgatgagagccaaaagt 475
            |||||| ||||||  | ||||| ||||||||||| ||||||||||  |  ||||| ||||
Sbjct: 1392 tttacattctgaaattctgcctcgtcttgatcatccgcttcaatgccgcaagccagaagt 1333

                                                                        
Query: 476  tgcactcgtcccaatcactggtcgtcagaagaatctgaagttgcatcgcggtggcaaaat 535
            ||||||| ||||||||||| ||||| |  || | ||| || ||||| || ||||||||||
Sbjct: 1332 tgcactcatcccaatcacttgtcgttaagagtacctggaggtgcattgcagtggcaaaat 1273

                                                                        
Query: 536  cactactatcaagtgcactgcacatctgaatgagttttgatgaaacatttggagatatat 595
            |||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 1272 cactagcatcaattgcactgcacaactgaatgagttttgatgaaacatttggagatatgt 1213

                                                                        
Query: 596  ctccagtgttgagtttcgcaaataacgccccaatcttctttgagttgtcttcaatttcac 655
            | ||| | || ||||| | ||| || ||||| || ||| |||| ||||| ||||||||||
Sbjct: 1212 cgccactatttagttttgaaaacaatgcccctattttccttgaattgtcctcaatttcac 1153

                   
Query: 656  gtttttt 662
            | |||||
Sbjct: 1152 gcttttt 1146



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  163 bits (82), Expect = 1e-36
 Identities = 169/198 (85%)
 Strand = Plus / Minus

                                                                            
Query: 510      ctgaagttgcatcgcggtggcaaaatcactactatcaagtgcactgcacatctgaatgag 569
                |||||| |||||||| |||||||||||||  ||||||||||||||||| | |||||||||
Sbjct: 27611305 ctgaaggtgcatcgcagtggcaaaatcaccgctatcaagtgcactgcaaagctgaatgag 27611246

                                                                            
Query: 570      ttttgatgaaacatttggagatatatctccagtgttgagtttcgcaaataacgccccaat 629
                |||||||||||| |||||||||||||| ||||  |||||||| |||||||  |  || ||
Sbjct: 27611245 ttttgatgaaacgtttggagatatatccccagaattgagttttgcaaatagtgttccgat 27611186

                                                                            
Query: 630      cttctttgagttgtcttcaatttcacgttttttagcgggtgcgcctcccaaggctttgga 689
                |||  ||||||||||||| ||||||||||||||| |  |||  || ||||  ||||| ||
Sbjct: 27611185 ctttcttgagttgtcttcgatttcacgttttttaacttgtgatccacccatagctttaga 27611126

                                  
Query: 690      tgtctcatcaaatagtct 707
                ||| ||||||||||||||
Sbjct: 27611125 tgtttcatcaaatagtct 27611108



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 76/91 (83%)
 Strand = Plus / Minus

                                                                            
Query: 416      tttacactctgaagctttgccttgtcttgatcatgcgcttcaatgatgagagccaaaagt 475
                |||||| ||||||  | ||||| ||||||||||| ||||||||||  |  ||||| ||||
Sbjct: 27611878 tttacattctgaaattctgcctcgtcttgatcatacgcttcaatgcggcaagccagaagt 27611819

                                               
Query: 476      tgcactcgtcccaatcactggtcgtcagaag 506
                ||||||||||||| || || || ||||||||
Sbjct: 27611818 tgcactcgtcccagtcgctcgttgtcagaag 27611788



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>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0047B07
          Length = 157797

 Score =  163 bits (82), Expect = 1e-36
 Identities = 169/198 (85%)
 Strand = Plus / Minus

                                                                         
Query: 510   ctgaagttgcatcgcggtggcaaaatcactactatcaagtgcactgcacatctgaatgag 569
             |||||| |||||||| |||||||||||||  ||||||||||||||||| | |||||||||
Sbjct: 68298 ctgaaggtgcatcgcagtggcaaaatcaccgctatcaagtgcactgcaaagctgaatgag 68239

                                                                         
Query: 570   ttttgatgaaacatttggagatatatctccagtgttgagtttcgcaaataacgccccaat 629
             |||||||||||| |||||||||||||| ||||  |||||||| |||||||  |  || ||
Sbjct: 68238 ttttgatgaaacgtttggagatatatccccagaattgagttttgcaaatagtgttccgat 68179

                                                                         
Query: 630   cttctttgagttgtcttcaatttcacgttttttagcgggtgcgcctcccaaggctttgga 689
             |||  ||||||||||||| ||||||||||||||| |  |||  || ||||  ||||| ||
Sbjct: 68178 ctttcttgagttgtcttcgatttcacgttttttaacttgtgatccacccatagctttaga 68119

                               
Query: 690   tgtctcatcaaatagtct 707
             ||| ||||||||||||||
Sbjct: 68118 tgtttcatcaaatagtct 68101



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 76/91 (83%)
 Strand = Plus / Minus

                                                                         
Query: 416   tttacactctgaagctttgccttgtcttgatcatgcgcttcaatgatgagagccaaaagt 475
             |||||| ||||||  | ||||| ||||||||||| ||||||||||  |  ||||| ||||
Sbjct: 68871 tttacattctgaaattctgcctcgtcttgatcatacgcttcaatgcggcaagccagaagt 68812

                                            
Query: 476   tgcactcgtcccaatcactggtcgtcagaag 506
             ||||||||||||| || || || ||||||||
Sbjct: 68811 tgcactcgtcccagtcgctcgttgtcagaag 68781



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>gb|AC113312.7| Mus musculus chromosome 7, clone RP23-440K7, complete sequence
          Length = 215675

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 590   atatatctccagtgttgagttt 611
             ||||||||||||||||||||||
Sbjct: 30745 atatatctccagtgttgagttt 30766



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>emb|AL807781.6| Human DNA sequence from clone RP11-264P13 on chromosome X Contains the 5'
              end of the CNK2 gene for connector enhancer of KSR2
              (KIAA0902), a  retinoic acid receptor responder (tazarotene
              induced) 2 (RARRES2) (TIG2) pseudogene and a CpG island,
              complete sequence
          Length = 186192

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 1      atttgagtttttatatatatat 22
              ||||||||||||||||||||||
Sbjct: 112658 atttgagtttttatatatatat 112637



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>dbj|AK133737.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:5730403H05 product:hypothetical
           protein, full insert sequence
          Length = 2860

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 590 atatatctccagtgttgagttt 611
           ||||||||||||||||||||||
Sbjct: 592 atatatctccagtgttgagttt 613



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>dbj|AK163265.1| Mus musculus 2 cells egg cDNA, RIKEN full-length enriched library,
           clone:B020007G14 product:unclassifiable, full insert
           sequence
          Length = 2268

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 590 atatatctccagtgttgagttt 611
           ||||||||||||||||||||||
Sbjct: 454 atatatctccagtgttgagttt 475



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>dbj|AK158571.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched
           library, clone:K230015A11 product:hypothetical
           Arginine-rich region profile containing protein, full
           insert sequence
          Length = 3053

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 590 atatatctccagtgttgagttt 611
           ||||||||||||||||||||||
Sbjct: 783 atatatctccagtgttgagttt 804



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>dbj|AK029831.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4931406B08 product:unclassifiable, full
           insert sequence
          Length = 3128

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 590 atatatctccagtgttgagttt 611
           ||||||||||||||||||||||
Sbjct: 903 atatatctccagtgttgagttt 924



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>dbj|AK018351.1| Mus musculus 12 days embryo female ovary cDNA, RIKEN full-length
           enriched library, clone:6620401M08
           product:unclassifiable, full insert sequence
          Length = 2502

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 590 atatatctccagtgttgagttt 611
           ||||||||||||||||||||||
Sbjct: 614 atatatctccagtgttgagttt 635



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>emb|BX663522.8| Zebrafish DNA sequence from clone CH211-261E11 in linkage group 18,
            complete sequence
          Length = 107305

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1    atttgagtttttatatatatat 22
            ||||||||||||||||||||||
Sbjct: 5278 atttgagtttttatatatatat 5257



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>emb|BX470230.5| Zebrafish DNA sequence from clone CH211-284B12 in linkage group 4,
             complete sequence
          Length = 173564

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1     atttgagtttttatatatatat 22
             ||||||||||||||||||||||
Sbjct: 68570 atttgagtttttatatatatat 68591



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>gb|AC122017.5| Mus musculus BAC clone RP24-361J4 from 7, complete sequence
          Length = 158807

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 590  atatatctccagtgttgagttt 611
            ||||||||||||||||||||||
Sbjct: 7407 atatatctccagtgttgagttt 7386



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>gb|AE014839.1| Plasmodium falciparum 3D7 chromosome 11 section 4 of 8 of the complete
             sequence
          Length = 250029

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 2     tttgagtttttatatatatat 22
             |||||||||||||||||||||
Sbjct: 84757 tttgagtttttatatatatat 84777



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>emb|CR548612.1| Paramecium tetraurelia macronuclear largest chromosome, complete sequence
          Length = 984602

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 583    tttggagatatatctccagtg 603
              |||||||||||||||||||||
Sbjct: 868198 tttggagatatatctccagtg 868218



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>gb|AC173452.3| Papio anubis clone RP41-379N3, complete sequence
          Length = 93212

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 204   gcaaaggaacatggaaaaact 224
             |||||||||||||||||||||
Sbjct: 92089 gcaaaggaacatggaaaaact 92069



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>emb|BX897662.16| Zebrafish DNA sequence from clone DKEYP-118G6, complete sequence
          Length = 171928

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 2     tttgagtttttatatatatat 22
             |||||||||||||||||||||
Sbjct: 51068 tttgagtttttatatatatat 51088



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>ref|XM_692130.1| PREDICTED: Danio rerio similar to low density lipoprotein
            receptor-related protein 1 (LOC568778), partial mRNA
          Length = 5769

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 684  tttggatgtctcatcaaatagtctgggtc 712
            |||||||||||| ||| ||||||||||||
Sbjct: 3464 tttggatgtctcttcagatagtctgggtc 3436



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>emb|BX470176.11| Zebrafish DNA sequence from clone CH211-120C23 in linkage group 7,
             complete sequence
          Length = 176596

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 12    tatatatatatnttgatgccatgt 35
             ||||||||||| ||||||||||||
Sbjct: 31735 tatatatatatattgatgccatgt 31712



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>gb|AC159930.3| Papio anubis clone RP41-174M1, complete sequence
          Length = 163985

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 204  gcaaaggaacatggaaaaact 224
            |||||||||||||||||||||
Sbjct: 3477 gcaaaggaacatggaaaaact 3457



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>gb|AC011450.4|AC011450 Homo sapiens chromosome 19 clone CTC-301O7, complete sequence
          Length = 106168

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 692   tctcatcaaatagtctgggtc 712
             |||||||||||||||||||||
Sbjct: 63206 tctcatcaaatagtctgggtc 63226



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>emb|BX119915.8| Zebrafish DNA sequence from clone CH211-10J20 in linkage group 20,
             complete sequence
          Length = 90306

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 2     tttgagtttttatatatatat 22
             |||||||||||||||||||||
Sbjct: 59443 tttgagtttttatatatatat 59423


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,702,664
Number of Sequences: 3902068
Number of extensions: 15702664
Number of successful extensions: 177836
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 177664
Number of HSP's gapped (non-prelim): 154
length of query: 733
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 710
effective length of database: 17,143,297,704
effective search space: 12171741369840
effective search space used: 12171741369840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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