ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags15i04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_466592.1| Oryza sativa (japonica cultivar-group), mRNA 125 2e-25
2dbj|AK111593.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 2e-25
3gb|BT018272.1| Zea mays clone EL01T0203D07.c mRNA sequence 64 6e-07
4gb|AY104058.1| Zea mays PCO060872 mRNA sequence 64 6e-07
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
6dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
7dbj|AP004124.3| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
8gb|BT009574.1| Triticum aestivum clone wre1n.pk0029.c4:fis, full... 44 0.57
9gb|AC093704.1| Gallus gallus clone WAG-38H9, complete sequence 44 0.57
10emb|AL772366.7| Mouse DNA sequence from clone RP23-171C7 on chro... 44 0.57
11gb|AC010922.10| Drosophila melanogaster clone BACR09H01, complet... 42 2.3
12gb|AC117398.3| Homo sapiens 3 BAC RP11-715A9 (Roswell Park Cance... 42 2.3
13gb|AE003504.4| Drosophila melanogaster chromosome X, section 56 ... 42 2.3
14emb|AL357054.14| Human DNA sequence from clone RP11-532F6 on chr... 42 2.3
15emb|AL844582.7| Mouse DNA sequence from clone RP23-234C7 on chro... 42 2.3
16gb|AY693646.1| Ocimum basilicum alpha-zingiberene synthase (ZIS)... 40 8.9
17gb|AC123694.11| Mus musculus chromosome 10, clone RP23-326O5, co... 40 8.9
18gb|AF241730.2| Homo sapiens chromosome X clone RP5-958I11 map p1... 40 8.9
19gb|AY368685.1| Mus musculus sperm-specific sodium proton exchang... 40 8.9
20emb|AL359984.5| Human DNA sequence from clone RP11-179J15 on chr... 40 8.9
21gb|AC008388.7| Homo sapiens chromosome 5 clone CTC-231O11, compl... 40 8.9
22gb|AF317621.1|AF317621 Lymantria dispar cadherin-related midgut ... 40 8.9
23gb|AC091842.3| Homo sapiens chromosome 5 clone CTD-2155B8, compl... 40 8.9
24gb|AC130686.15| Homo sapiens chromosome 17, clone RP13-415G19, c... 40 8.9
25gb|AC019349.28| Homo sapiens chromosome 17, clone RP11-156A24, c... 40 8.9
26gb|AC173996.2| Pan troglodytes chromosome X clone PTB-074P14 map... 40 8.9
27gb|AC084577.1|CBRG39O05 Caenorhabditis briggsae cosmid G39O05, c... 40 8.9
28gb|AC105208.15| Homo sapiens chromosome 17, clone CTD-3226O14, c... 40 8.9
29gb|AC173833.2| Pan troglodytes chromosome X clone CH251-45A9 map... 40 8.9
30gb|AC124636.23| Mus musculus chromosome 16, clone RP23-454J20, c... 40 8.9
31ref|NM_198106.1| Mus musculus solute carrier family 9, isoform 1... 40 8.9
32emb|AL669926.6| Mouse DNA sequence from clone RP23-74K21 on chro... 40 8.9 
>ref|XM_466592.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3118

 Score =  125 bits (63), Expect = 2e-25
 Identities = 174/211 (82%)
 Strand = Plus / Minus

                                                                        
Query: 445  gttctttcatgcgctgctcctccataggatcagggctcttcatacgtttcatcatgcgcc 504
            |||||||||| || || || |||| ||||||||||||||||||| ||||| | | |||||
Sbjct: 2477 gttctttcatccgttgttcttccagaggatcagggctcttcatatgtttcttgaagcgcc 2418

                                                                        
Query: 505  tgtcttgttcattaagagaatgaaatgttggcatagaatcccttgactgaggaagtggtg 564
            ||||||| ||||| |||| | |||||||||||||  ||||| ||||   ||| || ||| 
Sbjct: 2417 tgtcttgctcatttagagcaggaaatgttggcatgaaatcctttgatctaggcagaggta 2358

                                                                        
Query: 565  cttcacagaaccattcatggttcaacgcatcctctgctgatatgcgcgtttcagggtcat 624
             ||| |  ||||||||||| ||||| ||||| ||||||||||| ||| | ||||||||||
Sbjct: 2357 gttcgcgaaaccattcatgattcaaggcatcttctgctgatatacgcttctcagggtcat 2298

                                           
Query: 625  acgtcagcattctgtttagcaggtcaaatcc 655
            | ||||| | ||| |||||||| ||||||||
Sbjct: 2297 atgtcagtaatctatttagcagatcaaatcc 2267



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 40/45 (88%), Gaps = 2/45 (4%)
 Strand = Plus / Minus

                                                         
Query: 107  tgcacaccttacaatgcacaggtggattagattgtgaccaaaagt 151
            ||||||||||| ||||||  |||| ||||||||||||||| ||||
Sbjct: 2786 tgcacaccttataatgca--ggtgaattagattgtgaccagaagt 2744
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>dbj|AK111593.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093F08, full
            insert sequence
          Length = 3116

 Score =  125 bits (63), Expect = 2e-25
 Identities = 174/211 (82%)
 Strand = Plus / Minus

                                                                        
Query: 445  gttctttcatgcgctgctcctccataggatcagggctcttcatacgtttcatcatgcgcc 504
            |||||||||| || || || |||| ||||||||||||||||||| ||||| | | |||||
Sbjct: 2477 gttctttcatccgttgttcttccagaggatcagggctcttcatatgtttcttgaagcgcc 2418

                                                                        
Query: 505  tgtcttgttcattaagagaatgaaatgttggcatagaatcccttgactgaggaagtggtg 564
            ||||||| ||||| |||| | |||||||||||||  ||||| ||||   ||| || ||| 
Sbjct: 2417 tgtcttgctcatttagagcaggaaatgttggcatgaaatcctttgatctaggcagaggta 2358

                                                                        
Query: 565  cttcacagaaccattcatggttcaacgcatcctctgctgatatgcgcgtttcagggtcat 624
             ||| |  ||||||||||| ||||| ||||| ||||||||||| ||| | ||||||||||
Sbjct: 2357 gttcgcgaaaccattcatgattcaaggcatcttctgctgatatacgcttctcagggtcat 2298

                                           
Query: 625  acgtcagcattctgtttagcaggtcaaatcc 655
            | ||||| | ||| |||||||| ||||||||
Sbjct: 2297 atgtcagtaatctatttagcagatcaaatcc 2267



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 40/45 (88%), Gaps = 2/45 (4%)
 Strand = Plus / Minus

                                                         
Query: 107  tgcacaccttacaatgcacaggtggattagattgtgaccaaaagt 151
            ||||||||||| ||||||  |||| ||||||||||||||| ||||
Sbjct: 2786 tgcacaccttataatgca--ggtgaattagattgtgaccagaagt 2744
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>gb|BT018272.1| Zea mays clone EL01T0203D07.c mRNA sequence
          Length = 1477

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 74/88 (84%)
 Strand = Plus / Minus

                                                                       
Query: 565 cttcacagaaccattcatggttcaacgcatcctctgctgatatgcgcgtttcagggtcat 624
           |||||| |||||| ||||||||||| |||||  | || ||||||||| | ||||||||||
Sbjct: 911 cttcacggaaccactcatggttcaaggcatcagcagcagatatgcgcttctcagggtcat 852

                                       
Query: 625 acgtcagcattctgtttagcaggtcaaa 652
           | | |||||  || ||||||||||||||
Sbjct: 851 atgccagcaacctatttagcaggtcaaa 824
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>gb|AY104058.1| Zea mays PCO060872 mRNA sequence
          Length = 1566

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 113/140 (80%)
 Strand = Plus / Minus

                                                                       
Query: 501 cgcctgtcttgttcattaagagaatgaaatgttggcatagaatcccttgactgaggaagt 560
           ||||||||  |||||||||||| | | |||||||||||  | ||| |||| | ||| || 
Sbjct: 761 cgcctgtcaagttcattaagagcagggaatgttggcatgaagtcctttgatttaggcaga 702

                                                                       
Query: 561 ggtgcttcacagaaccattcatggttcaacgcatcctctgctgatatgcgcgtttcaggg 620
           ||  ||||| |||||||||  || || |  ||||| ||||||||||||||| | ||||||
Sbjct: 701 ggaacttcagagaaccatttgtgcttaagagcatcgtctgctgatatgcgcttatcaggg 642

                               
Query: 621 tcatacgtcagcattctgtt 640
           ||||| ||||||| ||||||
Sbjct: 641 tcataagtcagcagtctgtt 622



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 443 cagttctttcatgcgctgctcctccataggatcagggctcttca 486
           |||||||||||  || ||||| |||| ||||||||| |||||||
Sbjct: 819 cagttctttcaaacgttgctcttccagaggatcaggactcttca 776
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 445      gttctttcatgcgctgctcctccataggatcagggctcttcatacgtttc 494
                |||||||||| || || || |||| ||||||||||||||||||| |||||
Sbjct: 23584688 gttctttcatccgttgttcttccagaggatcagggctcttcatatgtttc 23584639



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 85/105 (80%)
 Strand = Plus / Minus

                                                                            
Query: 503      cctgtcttgttcattaagagaatgaaatgttggcatagaatcccttgactgaggaagtgg 562
                ||||||||| ||||| |||| | |||||||||||||  ||||| ||||   ||| || ||
Sbjct: 23584534 cctgtcttgctcatttagagcaggaaatgttggcatgaaatcctttgatctaggcagagg 23584475

                                                             
Query: 563      tgcttcacagaaccattcatggttcaacgcatcctctgctgatat 607
                |  ||| |  ||||||||||| ||||| ||||| |||||||||||
Sbjct: 23584474 tagttcgcgaaaccattcatgattcaaggcatcttctgctgatat 23584430



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 40/45 (88%), Gaps = 2/45 (4%)
 Strand = Plus / Minus

                                                             
Query: 107      tgcacaccttacaatgcacaggtggattagattgtgaccaaaagt 151
                ||||||||||| ||||||  |||| ||||||||||||||| ||||
Sbjct: 23584997 tgcacaccttataatgca--ggtgaattagattgtgaccagaagt 23584955



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                         
Query: 615      tcagggtcatacgtcagcattctgtttagcaggtcaaatcc 655
                ||||||||||| ||||| | ||| |||||||| ||||||||
Sbjct: 23584343 tcagggtcatatgtcagtaatctatttagcagatcaaatcc 23584303
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>dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1791_B03
          Length = 166214

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                
Query: 445    gttctttcatgcgctgctcctccataggatcagggctcttcatacgtttc 494
              |||||||||| || || || |||| ||||||||||||||||||| |||||
Sbjct: 150371 gttctttcatccgttgttcttccagaggatcagggctcttcatatgtttc 150322



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 85/105 (80%)
 Strand = Plus / Minus

                                                                          
Query: 503    cctgtcttgttcattaagagaatgaaatgttggcatagaatcccttgactgaggaagtgg 562
              ||||||||| ||||| |||| | |||||||||||||  ||||| ||||   ||| || ||
Sbjct: 150217 cctgtcttgctcatttagagcaggaaatgttggcatgaaatcctttgatctaggcagagg 150158

                                                           
Query: 563    tgcttcacagaaccattcatggttcaacgcatcctctgctgatat 607
              |  ||| |  ||||||||||| ||||| ||||| |||||||||||
Sbjct: 150157 tagttcgcgaaaccattcatgattcaaggcatcttctgctgatat 150113



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 40/45 (88%), Gaps = 2/45 (4%)
 Strand = Plus / Minus

                                                           
Query: 107    tgcacaccttacaatgcacaggtggattagattgtgaccaaaagt 151
              ||||||||||| ||||||  |||| ||||||||||||||| ||||
Sbjct: 150680 tgcacaccttataatgca--ggtgaattagattgtgaccagaagt 150638



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 615    tcagggtcatacgtcagcattctgtttagcaggtcaaatcc 655
              ||||||||||| ||||| | ||| |||||||| ||||||||
Sbjct: 150026 tcagggtcatatgtcagtaatctatttagcagatcaaatcc 149986
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>dbj|AP004124.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1669_F01
          Length = 140019

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 445   gttctttcatgcgctgctcctccataggatcagggctcttcatacgtttc 494
             |||||||||| || || || |||| ||||||||||||||||||| |||||
Sbjct: 25788 gttctttcatccgttgttcttccagaggatcagggctcttcatatgtttc 25739



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 85/105 (80%)
 Strand = Plus / Minus

                                                                         
Query: 503   cctgtcttgttcattaagagaatgaaatgttggcatagaatcccttgactgaggaagtgg 562
             ||||||||| ||||| |||| | |||||||||||||  ||||| ||||   ||| || ||
Sbjct: 25634 cctgtcttgctcatttagagcaggaaatgttggcatgaaatcctttgatctaggcagagg 25575

                                                          
Query: 563   tgcttcacagaaccattcatggttcaacgcatcctctgctgatat 607
             |  ||| |  ||||||||||| ||||| ||||| |||||||||||
Sbjct: 25574 tagttcgcgaaaccattcatgattcaaggcatcttctgctgatat 25530



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 40/45 (88%), Gaps = 2/45 (4%)
 Strand = Plus / Minus

                                                          
Query: 107   tgcacaccttacaatgcacaggtggattagattgtgaccaaaagt 151
             ||||||||||| ||||||  |||| ||||||||||||||| ||||
Sbjct: 26097 tgcacaccttataatgca--ggtgaattagattgtgaccagaagt 26055



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 615   tcagggtcatacgtcagcattctgtttagcaggtcaaatcc 655
             ||||||||||| ||||| | ||| |||||||| ||||||||
Sbjct: 25443 tcagggtcatatgtcagtaatctatttagcagatcaaatcc 25403
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>gb|BT009574.1| Triticum aestivum clone wre1n.pk0029.c4:fis, full insert mRNA
           sequence
          Length = 1180

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 443 cagttctttcatgcgctgctcctccataggatcagggctcttcata 488
           |||||||||||  || |||||||| | ||||||||| |||||||||
Sbjct: 456 cagttctttcaaccgttgctcctctagaggatcaggactcttcata 501
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>gb|AC093704.1| Gallus gallus clone WAG-38H9, complete sequence
          Length = 89724

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 551   ctgaggaagtggtgcttcacag 572
             ||||||||||||||||||||||
Sbjct: 76449 ctgaggaagtggtgcttcacag 76428
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>emb|AL772366.7| Mouse DNA sequence from clone RP23-171C7 on chromosome 2, complete
              sequence
          Length = 167389

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 498    atgcgcctgtcttgttcattaa 519
              ||||||||||||||||||||||
Sbjct: 105416 atgcgcctgtcttgttcattaa 105395
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>gb|AC010922.10| Drosophila melanogaster clone BACR09H01, complete sequence
          Length = 152607

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 622   catacgtcagcattctgttta 642
             |||||||||||||||||||||
Sbjct: 63401 catacgtcagcattctgttta 63381
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>gb|AC117398.3| Homo sapiens 3 BAC RP11-715A9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 109182

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 153   aggtaagagttcattgtgaccagaa 177
             ||||||||||||| |||||||||||
Sbjct: 78094 aggtaagagttcagtgtgaccagaa 78118
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>gb|AE003504.4| Drosophila melanogaster chromosome X, section 56 of 74 of the complete
             sequence
          Length = 298703

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 622   catacgtcagcattctgttta 642
             |||||||||||||||||||||
Sbjct: 65778 catacgtcagcattctgttta 65798
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>emb|AL357054.14| Human DNA sequence from clone RP11-532F6 on chromosome 6, complete
             sequence
          Length = 121656

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 60    atagctgtgaataggccagac 80
             |||||||||||||||||||||
Sbjct: 79353 atagctgtgaataggccagac 79333
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>emb|AL844582.7| Mouse DNA sequence from clone RP23-234C7 on chromosome 2, complete
              sequence
          Length = 221723

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 200    aagtgaaatagtgcctagcat 220
              |||||||||||||||||||||
Sbjct: 108911 aagtgaaatagtgcctagcat 108891
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>gb|AY693646.1| Ocimum basilicum alpha-zingiberene synthase (ZIS) mRNA, complete cds
          Length = 1626

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 294  cagacaccaagaagaaaatg 313
            ||||||||||||||||||||
Sbjct: 1568 cagacaccaagaagaaaatg 1587
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>gb|AC123694.11| Mus musculus chromosome 10, clone RP23-326O5, complete sequence
          Length = 214111

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 457   gctgctcctccataggatca 476
             ||||||||||||||||||||
Sbjct: 91513 gctgctcctccataggatca 91532
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>gb|AF241730.2| Homo sapiens chromosome X clone RP5-958I11 map p11.4, complete sequence
          Length = 128427

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 550   actgaggaagtggtgcttca 569
             ||||||||||||||||||||
Sbjct: 64717 actgaggaagtggtgcttca 64736
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>gb|AY368685.1| Mus musculus sperm-specific sodium proton exchanger mRNA, complete
           cds
          Length = 3867

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 295 agacaccaagaagaaaatgccctt 318
           ||||||||||||||||| ||||||
Sbjct: 92  agacaccaagaagaaaaggccctt 115
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>emb|AL359984.5| Human DNA sequence from clone RP11-179J15 on chromosome 20 Contains
             ESTs, STSs and GSSs, complete sequence
          Length = 62109

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 98    tgagatatttgcacaccttacaat 121
             ||||||||||||||||| ||||||
Sbjct: 18826 tgagatatttgcacaccatacaat 18803
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>gb|AC008388.7| Homo sapiens chromosome 5 clone CTC-231O11, complete sequence
          Length = 122012

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   acaccttacaatgcacaggt 129
             ||||||||||||||||||||
Sbjct: 22672 acaccttacaatgcacaggt 22653
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>gb|AF317621.1|AF317621 Lymantria dispar cadherin-related midgut membrane protein mRNA,
           complete cds
          Length = 5484

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 304 gaagaaaatgcccttcatat 323
           ||||||||||||||||||||
Sbjct: 939 gaagaaaatgcccttcatat 958
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>gb|AC091842.3| Homo sapiens chromosome 5 clone CTD-2155B8, complete sequence
          Length = 152147

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 110    acaccttacaatgcacaggt 129
              ||||||||||||||||||||
Sbjct: 138485 acaccttacaatgcacaggt 138466
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>gb|AC130686.15| Homo sapiens chromosome 17, clone RP13-415G19, complete sequence
          Length = 208462

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 336    tgaccttggaacacatgcac 355
              ||||||||||||||||||||
Sbjct: 148180 tgaccttggaacacatgcac 148161
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>gb|AC019349.28| Homo sapiens chromosome 17, clone RP11-156A24, complete sequence
          Length = 166320

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 336   tgaccttggaacacatgcac 355
             ||||||||||||||||||||
Sbjct: 32929 tgaccttggaacacatgcac 32910
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>gb|AC173996.2| Pan troglodytes chromosome X clone PTB-074P14 map human ortholog p11.4,
             complete sequence
          Length = 160565

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 550   actgaggaagtggtgcttca 569
             ||||||||||||||||||||
Sbjct: 11048 actgaggaagtggtgcttca 11067
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>gb|AC084577.1|CBRG39O05 Caenorhabditis briggsae cosmid G39O05, complete sequence
          Length = 38027

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 131   gattagattgtgaccaaaagtaaggtaa 158
             ||||||||| |||| |||||||||||||
Sbjct: 35381 gattagattatgactaaaagtaaggtaa 35354
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>gb|AC105208.15| Homo sapiens chromosome 17, clone CTD-3226O14, complete sequence
          Length = 65233

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 336   tgaccttggaacacatgcac 355
             ||||||||||||||||||||
Sbjct: 63929 tgaccttggaacacatgcac 63910
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>gb|AC173833.2| Pan troglodytes chromosome X clone CH251-45A9 map human ortholog p11.4,
              complete sequence
          Length = 162519

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 550    actgaggaagtggtgcttca 569
              ||||||||||||||||||||
Sbjct: 124838 actgaggaagtggtgcttca 124857
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>gb|AC124636.23| Mus musculus chromosome 16, clone RP23-454J20, complete sequence
          Length = 187247

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 295   agacaccaagaagaaaatgccctt 318
             ||||||||||||||||| ||||||
Sbjct: 93659 agacaccaagaagaaaaggccctt 93636
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>ref|NM_198106.1| Mus musculus solute carrier family 9, isoform 10 (Slc9a10), mRNA
          Length = 3867

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 295 agacaccaagaagaaaatgccctt 318
           ||||||||||||||||| ||||||
Sbjct: 92  agacaccaagaagaaaaggccctt 115
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>emb|AL669926.6| Mouse DNA sequence from clone RP23-74K21 on chromosome 2, complete
             sequence
          Length = 226854

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 339   ccttggaacacatgcacttccaaa 362
             |||||||||||||||| |||||||
Sbjct: 83263 ccttggaacacatgcagttccaaa 83286


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,574,501
Number of Sequences: 3902068
Number of extensions: 5574501
Number of successful extensions: 92621
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92516
Number of HSP's gapped (non-prelim): 100
length of query: 655
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 632
effective length of database: 17,143,297,704
effective search space: 10834564148928
effective search space used: 10834564148928
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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